=============================================================================== About this build: this rebuild has been done as part of reproduce.debian.net where we aim to reproduce Debian binary packages distributed via ftp.debian.org, by rebuilding using the exact same packages as the original build on the buildds, as described in the relevant .buildinfo file from buildinfos.debian.net. For more information please go to https://reproduce.debian.net or join #debian-reproducible on irc.debian.org =============================================================================== Preparing download of sources for /srv/rebuilderd/tmp/rebuilderdnQaZYI/inputs/mdanalysis_2.10.0-1_all.buildinfo Source: mdanalysis Version: 2.10.0-1 rebuilderd-worker node: ionos25-amd64 +------------------------------------------------------------------------------+ | Downloading sources Sat, 01 Nov 2025 13:28:19 +0000 | +------------------------------------------------------------------------------+ Get:1 https://deb.debian.org/debian trixie InRelease [140 kB] Get:2 https://deb.debian.org/debian-security trixie-security InRelease [43.4 kB] Get:3 https://deb.debian.org/debian trixie-updates InRelease [47.3 kB] Get:4 https://deb.debian.org/debian trixie-proposed-updates InRelease [55.8 kB] Get:5 https://deb.debian.org/debian trixie-backports InRelease [54.0 kB] Get:6 https://deb.debian.org/debian forky InRelease [148 kB] Get:7 https://deb.debian.org/debian sid InRelease [207 kB] Get:8 https://deb.debian.org/debian experimental InRelease [101 kB] Get:9 https://deb.debian.org/debian trixie/main Sources [10.5 MB] Get:10 https://deb.debian.org/debian trixie/non-free-firmware Sources [6536 B] Get:11 https://deb.debian.org/debian-security trixie-security/main Sources [91.1 kB] Get:12 https://deb.debian.org/debian-security trixie-security/non-free-firmware Sources [696 B] Get:13 https://deb.debian.org/debian trixie-updates/main Sources [2788 B] Get:14 https://deb.debian.org/debian trixie-proposed-updates/main Sources [109 kB] Get:15 https://deb.debian.org/debian trixie-proposed-updates/non-free-firmware Sources [692 B] Get:16 https://deb.debian.org/debian trixie-backports/main Sources [79.3 kB] Get:17 https://deb.debian.org/debian trixie-backports/non-free-firmware Sources [1052 B] Get:18 https://deb.debian.org/debian forky/non-free-firmware Sources [7128 B] Get:19 https://deb.debian.org/debian forky/main Sources [10.7 MB] Get:20 https://deb.debian.org/debian sid/main Sources [11.2 MB] Get:21 https://deb.debian.org/debian sid/non-free-firmware Sources [9088 B] Get:22 https://deb.debian.org/debian experimental/non-free-firmware Sources [2572 B] Get:23 https://deb.debian.org/debian experimental/main Sources [376 kB] Fetched 33.9 MB in 3s (10.1 MB/s) Reading package lists... 'https://deb.debian.org/debian/pool/main/m/mdanalysis/mdanalysis_2.10.0-1.dsc' mdanalysis_2.10.0-1.dsc 3294 SHA256:a85833cf2925f1af8785226879eed3bf908b4890cf55c395765f4c1844b35773 'https://deb.debian.org/debian/pool/main/m/mdanalysis/mdanalysis_2.10.0.orig.tar.gz' mdanalysis_2.10.0.orig.tar.gz 61501775 SHA256:e36ee45e58236a777842f1bf8fdc7a9dc5b1d0836dd450e8ded42a24b40f653b 'https://deb.debian.org/debian/pool/main/m/mdanalysis/mdanalysis_2.10.0-1.debian.tar.xz' mdanalysis_2.10.0-1.debian.tar.xz 14568 SHA256:a32ea520844a6717dea95fe09cc4bc6aa4e2fde5aab4f19dc767604c5e2ddfa0 e36ee45e58236a777842f1bf8fdc7a9dc5b1d0836dd450e8ded42a24b40f653b mdanalysis_2.10.0.orig.tar.gz a32ea520844a6717dea95fe09cc4bc6aa4e2fde5aab4f19dc767604c5e2ddfa0 mdanalysis_2.10.0-1.debian.tar.xz a85833cf2925f1af8785226879eed3bf908b4890cf55c395765f4c1844b35773 mdanalysis_2.10.0-1.dsc +------------------------------------------------------------------------------+ | Calling debrebuild Sat, 01 Nov 2025 13:28:24 +0000 | +------------------------------------------------------------------------------+ Rebuilding mdanalysis=2.10.0-1 in /srv/rebuilderd/tmp/rebuilderdnQaZYI/inputs now. + nice /usr/bin/debrebuild --buildresult=/srv/rebuilderd/tmp/rebuilderdnQaZYI/out --builder=sbuild+unshare --cache=/srv/rebuilderd/cache -- /srv/rebuilderd/tmp/rebuilderdnQaZYI/inputs/mdanalysis_2.10.0-1_all.buildinfo /srv/rebuilderd/tmp/rebuilderdnQaZYI/inputs/mdanalysis_2.10.0-1_all.buildinfo contains a GPG signature which has NOT been validated Using defined Build-Path: /build/reproducible-path/mdanalysis-2.10.0 I: verifying dsc... successful! Get:1 http://deb.debian.org/debian unstable InRelease [207 kB] Get:2 http://snapshot.debian.org/archive/debian/20251021T083202Z sid InRelease [207 kB] Get:3 http://snapshot.debian.org/archive/debian/20251022T143047Z sid InRelease [207 kB] Get:4 http://deb.debian.org/debian unstable/main amd64 Packages [10.2 MB] Get:5 http://snapshot.debian.org/archive/debian/20251021T083202Z sid/main amd64 Packages [10.2 MB] Get:6 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main amd64 Packages [10.2 MB] Fetched 31.3 MB in 3s (10.5 MB/s) Reading package lists... W: http://snapshot.debian.org/archive/debian/20251021T083202Z/dists/sid/InRelease: Loading /etc/apt/trusted.gpg from deprecated option Dir::Etc::Trusted W: http://snapshot.debian.org/archive/debian/20251022T143047Z/dists/sid/InRelease: Loading /etc/apt/trusted.gpg from deprecated option Dir::Etc::Trusted Get:1 http://deb.debian.org/debian unstable/main amd64 node-corepack all 0.24.0-5 [712 kB] Fetched 712 kB in 0s (55.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprpeb4clu/node-corepack_0.24.0-5_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libdpkg-perl all 1.22.21 [650 kB] Fetched 650 kB in 0s (54.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprsqnkbjt/libdpkg-perl_1.22.21_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-pygments all 2.18.0+dfsg-2 [836 kB] Fetched 836 kB in 0s (70.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp14aks4ja/python3-pygments_2.18.0+dfsg-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-pyparsing all 3.1.3-1 [148 kB] Fetched 148 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjs6nttqn/python3-pyparsing_3.1.3-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 base-files amd64 14 [72.9 kB] Fetched 72.9 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxgtr43ds/base-files_14_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 node-acorn all 8.8.1+ds+~cs25.17.7-2 [128 kB] Fetched 128 kB in 0s (12.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfjgp0zpv/node-acorn_8.8.1+ds+~cs25.17.7-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.context all 6.0.1-1 [8276 B] Fetched 8276 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplnqx0fwa/python3-jaraco.context_6.0.1-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 node-argparse all 2.0.1-2 [34.6 kB] Fetched 34.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvp8q1g8x/node-argparse_2.0.1-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libjbig0 amd64 2.1-6.1+b2 [32.1 kB] Fetched 32.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr9zmwjln/libjbig0_2.1-6.1+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 node-sprintf-js all 1.1.2+ds1+~1.1.2-1 [4024 B] Fetched 4024 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqnc1bq2c/node-sprintf-js_1.1.2+ds1+~1.1.2-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libjs-sphinxdoc all 8.2.3-8 [27.6 kB] Fetched 27.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3468711k/libjs-sphinxdoc_8.2.3-8_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-netcdf4 amd64 1.7.3-1 [625 kB] Fetched 625 kB in 0s (51.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpq5my1jry/python3-netcdf4_1.7.3-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libavif16 amd64 1.3.0-1+b1 [137 kB] Fetched 137 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfrf3anaw/libavif16_1.3.0-1+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-rlpycairo all 0.3.0-4 [10.1 kB] Fetched 10.1 kB in 0s (146 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp602v0ws7/python3-rlpycairo_0.3.0-4_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libjs-mathjax all 2.7.9+dfsg-1 [5667 kB] Fetched 5667 kB in 0s (152 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7wv17d86/libjs-mathjax_2.7.9+dfsg-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libseccomp2 amd64 2.6.0-2 [51.7 kB] Fetched 51.7 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpod26m5dq/libseccomp2_2.6.0-2_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main amd64 libstdc++-15-dev amd64 15.2.0-5 [2443 kB] Fetched 2443 kB in 0s (115 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbpuv3qei/libstdc++-15-dev_15.2.0-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 fonts-lyx all 2.4.4-2 [190 kB] Fetched 190 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0nuent8_/fonts-lyx_2.4.4-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-citeproc all 0.9.0-1 [100 kB] Fetched 100 kB in 0s (1013 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp630ym36p/python3-citeproc_0.9.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-mmtf all 1.1.3-1 [17.0 kB] Fetched 17.0 kB in 0s (166 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpetstw387/python3-mmtf_1.1.3-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-pybtex all 0.25.1-1 [75.2 kB] Fetched 75.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgymcx1sw/python3-pybtex_0.25.1-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libaudit-common all 1:4.1.2-1 [14.3 kB] Fetched 14.3 kB in 0s (0 B/s) dpkg-name: info: moved 'libaudit-common_1%3a4.1.2-1_all.deb' to '/srv/rebuilderd/tmp/tmpw8r1uc15/libaudit-common_4.1.2-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libicu76 amd64 76.1-4 [9722 kB] Fetched 9722 kB in 0s (163 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvhwu5dap/libicu76_76.1-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 rdkit-doc all 202503.6-2 [6982 kB] Fetched 6982 kB in 0s (27.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpg9wbtab0/rdkit-doc_202503.6-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python-h5py-doc all 3.14.0-3 [262 kB] Fetched 262 kB in 0s (2135 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpw18yjc_f/python-h5py-doc_3.14.0-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-zopfli amd64 0.2.3.post1-1+b1 [10.5 kB] Fetched 10.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzc6j0uie/python3-zopfli_0.2.3.post1-1+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 blt amd64 2.5.3+dfsg-8 [5984 B] Fetched 5984 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9hyktw5y/blt_2.5.3+dfsg-8_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 bash amd64 5.3-1 [1556 kB] Fetched 1556 kB in 0s (84.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp38vyyoba/bash_5.3-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-defusedxml all 0.7.1-3 [43.4 kB] Fetched 43.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpf1j7h6qy/python3-defusedxml_0.7.1-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libmpc3 amd64 1.3.1-2 [55.8 kB] Fetched 55.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpw58j2e34/libmpc3_1.3.1-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 grep amd64 3.12-1 [443 kB] Fetched 443 kB in 0s (41.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr7qa4b08/grep_3.12-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libssl3t64 amd64 3.5.4-1 [2446 kB] Fetched 2446 kB in 0s (108 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpci4tqe07/libssl3t64_3.5.4-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Fetched 42.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3ale2vgi/libpipeline1_1.5.8-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-ufolib2 all 0.17.1+dfsg1-1 [33.0 kB] Fetched 33.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphirsvlu8/python3-ufolib2_0.17.1+dfsg1-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libblas3 amd64 3.12.1-7 [215 kB] Fetched 215 kB in 0s (18.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6xe2mruq/libblas3_3.12.1-7_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-latexcodec all 3.0.0-1 [17.5 kB] Fetched 17.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwq_q87de/python3-latexcodec_3.0.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-fonttools amd64 4.57.0-2 [1457 kB] Fetched 1457 kB in 0s (91.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5c8ti6jc/python3-fonttools_4.57.0-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-sympy all 1.14.0-2 [4228 kB] Fetched 4228 kB in 0s (120 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzshptlwp/python3-sympy_1.14.0-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 liblzf1 amd64 3.6-4+b3 [10.1 kB] Fetched 10.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphh1kmfd1/liblzf1_3.6-4+b3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-pytz all 2025.2-4 [31.8 kB] Fetched 31.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7n3773mi/python3-pytz_2025.2-4_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-tk amd64 3.13.9-1 [8688 B] Fetched 8688 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpulyjgw24/python3-tk_3.13.9-1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251021T083202Z sid/main amd64 cython3 amd64 3.0.11+dfsg-2+b1 [2504 kB] Fetched 2504 kB in 0s (124 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpisah34d9/cython3_3.0.11+dfsg-2+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 node-semver all 7.6.1+~7.5.8-2 [49.5 kB] Fetched 49.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyip9uma_/node-semver_7.6.1+~7.5.8-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 xfonts-utils amd64 1:7.7+7 [93.3 kB] Fetched 93.3 kB in 0s (8941 kB/s) dpkg-name: info: moved 'xfonts-utils_1%3a7.7+7_amd64.deb' to '/srv/rebuilderd/tmp/tmpehocwpg7/xfonts-utils_7.7+7_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.28 [941 kB] Fetched 941 kB in 0s (71.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv1nc4kkc/debhelper_13.28_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libffi8 amd64 3.5.2-2 [25.5 kB] Fetched 25.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo2mi6s3r/libffi8_3.5.2-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 node-brace-expansion all 2.0.1+~1.1.0-2 [8012 B] Fetched 8012 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl7g__ork/node-brace-expansion_2.0.1+~1.1.0-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libimagequant0 amd64 4.4.0-3 [251 kB] Fetched 251 kB in 0s (24.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp79p3pr88/libimagequant0_4.4.0-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libuuid1 amd64 2.41.2-4 [38.7 kB] Fetched 38.7 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpw7ethxh7/libuuid1_2.41.2-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-lxml amd64 6.0.2-1 [1447 kB] Fetched 1447 kB in 0s (91.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjg6vbnq1/python3-lxml_6.0.2-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxxhash0 amd64 0.8.3-2 [27.1 kB] Fetched 27.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpftwsd04k/libxxhash0_0.8.3-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpython3-stdlib amd64 3.13.7-1 [10.2 kB] Fetched 10.2 kB in 0s (989 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4rqt4y_b/libpython3-stdlib_3.13.7-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libtinfo6 amd64 6.5+20250216-2 [348 kB] Fetched 348 kB in 0s (34.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptqc4hujb/libtinfo6_6.5+20250216-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 node-minimatch all 9.0.3-6 [76.8 kB] Fetched 76.8 kB in 0s (289 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphhs85fez/node-minimatch_9.0.3-6_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python-babel-localedata all 2.17.0-1 [6050 kB] Fetched 6050 kB in 0s (26.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsuepslgv/python-babel-localedata_2.17.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libcrypt1 amd64 1:4.4.38-1 [90.1 kB] Fetched 90.1 kB in 0s (822 kB/s) dpkg-name: info: moved 'libcrypt1_1%3a4.4.38-1_amd64.deb' to '/srv/rebuilderd/tmp/tmp67xhm74i/libcrypt1_4.4.38-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libssh2-1t64 amd64 1.11.1-1 [245 kB] Fetched 245 kB in 0s (1077 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb41xjuol/libssh2-1t64_1.11.1-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libuv1t64 amd64 1.51.0-2 [155 kB] Fetched 155 kB in 0s (688 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl_58uv4f/libuv1t64_1.51.0-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 node-cjs-module-lexer all 1.2.3+dfsg-1 [30.6 kB] Fetched 30.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_cem4cbu/node-cjs-module-lexer_1.2.3+dfsg-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libperl5.40 amd64 5.40.1-6 [4341 kB] Fetched 4341 kB in 0s (143 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpawno33e7/libperl5.40_5.40.1-6_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libk5crypto3 amd64 1.21.3-5 [81.5 kB] Fetched 81.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph0wtb5dz/libk5crypto3_1.21.3-5_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251021T083202Z sid/main amd64 libxslt1.1 amd64 1.1.43-0.2 [155 kB] Fetched 155 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmosd7_qk/libxslt1.1_1.1.43-0.2_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main amd64 libstdc++6 amd64 15.2.0-5 [736 kB] Fetched 736 kB in 0s (63.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4kpwnfet/libstdc++6_15.2.0-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-typeguard all 4.4.4-1 [37.1 kB] Fetched 37.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4cc84d7g/python3-typeguard_4.4.4-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libtasn1-6 amd64 4.20.0-2 [49.9 kB] Fetched 49.9 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm114s9rf/libtasn1-6_4.20.0-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxcb1 amd64 1.17.0-2+b1 [144 kB] Fetched 144 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppsfy3rxj/libxcb1_1.17.0-2+b1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main amd64 liblsan0 amd64 15.2.0-5 [1248 kB] Fetched 1248 kB in 0s (83.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkypsfe03/liblsan0_15.2.0-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 gcc-x86-64-linux-gnu amd64 4:15.2.0-4 [1436 B] Fetched 1436 B in 0s (0 B/s) dpkg-name: info: moved 'gcc-x86-64-linux-gnu_4%3a15.2.0-4_amd64.deb' to '/srv/rebuilderd/tmp/tmpw0vuhuua/gcc-x86-64-linux-gnu_15.2.0-4_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main amd64 libitm1 amd64 15.2.0-5 [26.5 kB] Fetched 26.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3berow4w/libitm1_15.2.0-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libcrypt-dev amd64 1:4.4.38-1 [119 kB] Fetched 119 kB in 0s (0 B/s) dpkg-name: info: moved 'libcrypt-dev_1%3a4.4.38-1_amd64.deb' to '/srv/rebuilderd/tmp/tmpqqcm4qkw/libcrypt-dev_4.4.38-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libnghttp2-14 amd64 1.64.0-1.1+b1 [76.2 kB] Fetched 76.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc6p8ajm8/libnghttp2-14_1.64.0-1.1+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 node-debug all 4.4.1+~4.1.12-1 [17.1 kB] Fetched 17.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpeyykfc4w/node-debug_4.4.1+~4.1.12-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-sklearn-lib amd64 1.7.2+dfsg-3 [3530 kB] Fetched 3530 kB in 0s (17.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp26frhh_m/python3-sklearn-lib_1.7.2+dfsg-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libraqm0 amd64 0.10.3-1 [14.0 kB] Fetched 14.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy7_4q30r/libraqm0_0.10.3-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-imagesize all 1.4.1-1 [6688 B] Fetched 6688 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu5pge23d/python3-imagesize_1.4.1-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 g++ amd64 4:15.2.0-4 [1344 B] Fetched 1344 B in 0s (0 B/s) dpkg-name: info: moved 'g++_4%3a15.2.0-4_amd64.deb' to '/srv/rebuilderd/tmp/tmp6aik3k2l/g++_15.2.0-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-minimal amd64 3.13.7-1 [27.2 kB] Fetched 27.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjvfl45vp/python3-minimal_3.13.7-1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251021T083202Z sid/main amd64 python-numpy-doc all 1:2.3.3+ds-3 [7268 kB] Fetched 7268 kB in 0s (159 MB/s) dpkg-name: info: moved 'python-numpy-doc_1%3a2.3.3+ds-3_all.deb' to '/srv/rebuilderd/tmp/tmp3q1eg6w0/python-numpy-doc_2.3.3+ds-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-jinja2 all 3.1.6-1 [107 kB] Fetched 107 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu9xna2oa/python3-jinja2_3.1.6-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main amd64 libcc1-0 amd64 15.2.0-5 [42.8 kB] Fetched 42.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn1hfqw2s/libcc1-0_15.2.0-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 patch amd64 2.8-2 [134 kB] Fetched 134 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_nylhqko/patch_2.8-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-h5py all 3.14.0-3 [18.3 kB] Fetched 18.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpe7jqm59u/python3-h5py_3.14.0-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-build all 1.2.2-4 [36.2 kB] Fetched 36.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvg0yi0tq/python3-build_1.2.2-4_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-lz4 amd64 4.4.4+dfsg-3 [25.6 kB] Fetched 25.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpikt3969f/python3-lz4_4.4.4+dfsg-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libdb5.3t64 amd64 5.3.28+dfsg2-10 [709 kB] Fetched 709 kB in 0s (60.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqv6i3bw0/libdb5.3t64_5.3.28+dfsg2-10_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxss1 amd64 1:1.2.3-1+b3 [17.0 kB] Fetched 17.0 kB in 0s (0 B/s) dpkg-name: info: moved 'libxss1_1%3a1.2.3-1+b3_amd64.deb' to '/srv/rebuilderd/tmp/tmp877nbq01/libxss1_1.2.3-1+b3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 nodejs amd64 20.19.5+dfsg+~cs20.19.12-4 [355 kB] Fetched 355 kB in 0s (34.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjzv3cmoh/nodejs_20.19.5+dfsg+~cs20.19.12-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 21 [12.2 kB] Fetched 12.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpost6pxxr/dh-autoreconf_21_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libdeflate0 amd64 1.23-2 [47.3 kB] Fetched 47.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpho5axfh0/libdeflate0_1.23-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.23.1-2 [770 kB] Fetched 770 kB in 0s (60.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqe28t0x9/autopoint_0.23.1-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251021T083202Z sid/main amd64 python3-mpmath all 1.3.0-1 [419 kB] Fetched 419 kB in 0s (8803 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt3_6bjpe/python3-mpmath_1.3.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3.13-dev amd64 3.13.9-1 [504 kB] Fetched 504 kB in 0s (2462 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp633djrbn/python3.13-dev_3.13.9-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 cpp-x86-64-linux-gnu amd64 4:15.2.0-4 [5292 B] Fetched 5292 B in 0s (10.9 kB/s) dpkg-name: info: moved 'cpp-x86-64-linux-gnu_4%3a15.2.0-4_amd64.deb' to '/srv/rebuilderd/tmp/tmpt96a4w5j/cpp-x86-64-linux-gnu_15.2.0-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 hostname amd64 3.25 [11.0 kB] Fetched 11.0 kB in 1s (18.8 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjf_5mel3/hostname_3.25_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libsmartcols1 amd64 2.41.2-4 [145 kB] Fetched 145 kB in 1s (204 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpi2m4mxz0/libsmartcols1_2.41.2-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 dpkg amd64 1.22.21 [1538 kB] Fetched 1538 kB in 0s (86.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp51zd2iuy/dpkg_1.22.21_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-sphinxcontrib.jquery all 4.1-6 [7496 B] Fetched 7496 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjoqh11ty/python3-sphinxcontrib.jquery_4.1-6_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 liblerc4 amd64 4.0.0+ds-5 [183 kB] Fetched 183 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph0cw3d9t/liblerc4_4.0.0+ds-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libqhull-r8.0 amd64 2020.2-7 [248 kB] Fetched 248 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprzr4b9am/libqhull-r8.0_2020.2-7_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-doc all 3.13.7-1 [10.4 kB] Fetched 10.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx3sric_l/python3-doc_3.13.7-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 rpcsvc-proto amd64 1.4.3-1 [63.3 kB] Fetched 63.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvu7adyr9/rpcsvc-proto_1.4.3-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-6 [9456 B] Fetched 9456 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnd504_89/libkeyutils1_1.6.3-6_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libldap2 amd64 2.6.10+dfsg-1 [194 kB] Fetched 194 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm9epaqgq/libldap2_2.6.10+dfsg-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Fetched 104 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpktdse8es/libarchive-zip-perl_1.68-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-roman-numerals all 3.1.0-2 [8740 B] Fetched 8740 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpasgj8xsj/python3-roman-numerals_3.1.0-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Fetched 12.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpk5okkf3u/python3-jaraco.functools_4.1.0-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251021T083202Z sid/main amd64 python3-scipy amd64 1.16.2-2 [16.5 MB] Fetched 16.5 MB in 0s (99.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpln44y29u/python3-scipy_1.16.2-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.16-2 [108 kB] Fetched 108 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0w0gkwt5/dwz_0.16-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.46-5 [109 kB] Fetched 109 kB in 0s (0 B/s) dpkg-name: info: moved 'libmagic1t64_1%3a5.46-5_amd64.deb' to '/srv/rebuilderd/tmp/tmpx_qjxorb/libmagic1t64_5.46-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libfreetype6 amd64 2.13.3+dfsg-1 [452 kB] Fetched 452 kB in 0s (31.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4l2ng3wv/libfreetype6_2.13.3+dfsg-1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main amd64 cpp-15-x86-64-linux-gnu amd64 15.2.0-5 [12.1 MB] Fetched 12.1 MB in 0s (126 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy_01lls7/cpp-15-x86-64-linux-gnu_15.2.0-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 sgml-base all 1.31+nmu1 [10.9 kB] Fetched 10.9 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbdluxn6j/sgml-base_1.31+nmu1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libngtcp2-crypto-gnutls8 amd64 1.16.0-1 [25.2 kB] Fetched 25.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpub57k3kd/libngtcp2-crypto-gnutls8_1.16.0-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxrender1 amd64 1:0.9.12-1 [27.9 kB] Fetched 27.9 kB in 0s (0 B/s) dpkg-name: info: moved 'libxrender1_1%3a0.9.12-1_amd64.deb' to '/srv/rebuilderd/tmp/tmppoysp9q3/libxrender1_0.9.12-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-autocommand all 2.2.2-3 [13.6 kB] Fetched 13.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjsyzrxx_/python3-autocommand_2.2.2-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 fonts-urw-base35 all 20200910-8 [10.8 MB] Fetched 10.8 MB in 0s (141 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpq0ysa875/fonts-urw-base35_20200910-8_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main amd64 g++-15-x86-64-linux-gnu amd64 15.2.0-5 [13.1 MB] Fetched 13.1 MB in 0s (116 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptqp84f18/g++-15-x86-64-linux-gnu_15.2.0-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libkrb5support0 amd64 1.21.3-5 [33.0 kB] Fetched 33.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgmgn1yp5/libkrb5support0_1.21.3-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.26 [27.0 kB] Fetched 27.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpa2pkw1jw/sensible-utils_0.0.26_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-dev amd64 3.13.7-1 [26.1 kB] Fetched 26.1 kB in 0s (2224 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxjwav1zd/python3-dev_3.13.7-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libnghttp3-9 amd64 1.12.0-1 [68.4 kB] Fetched 68.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdz4jork2/libnghttp3-9_1.12.0-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libselinux1 amd64 3.9-2 [85.4 kB] Fetched 85.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2ik6z__y/libselinux1_3.9-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-cairo amd64 1.27.0-2 [114 kB] Fetched 114 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3d67nngf/python3-cairo_1.27.0-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 bzip2 amd64 1.0.8-6 [40.5 kB] Fetched 40.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp879nn5af/bzip2_1.0.8-6_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpixman-1-0 amd64 0.46.4-1 [259 kB] Fetched 259 kB in 0s (25.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpg9uwuofm/libpixman-1-0_0.46.4-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 node-xtend all 4.0.2-3 [3932 B] Fetched 3932 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdifivqeo/node-xtend_4.0.2-3_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251021T083202Z sid/main amd64 libcurl4t64 amd64 8.17.0~rc2-1 [408 kB] Fetched 408 kB in 0s (34.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9l_uakz3/libcurl4t64_8.17.0~rc2-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 media-types all 14.0.0 [30.8 kB] Fetched 30.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzlr9crlu/media-types_14.0.0_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251021T083202Z sid/main amd64 libctf-nobfd0 amd64 2.45-7 [167 kB] Fetched 167 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_zrhihd9/libctf-nobfd0_2.45-7_amd64.deb' Downloading dependency 1 of 429: node-corepack:amd64=0.24.0-5 Downloading dependency 2 of 429: libdpkg-perl:amd64=1.22.21 Downloading dependency 3 of 429: python3-pygments:amd64=2.18.0+dfsg-2 Downloading dependency 4 of 429: python3-pyparsing:amd64=3.1.3-1 Downloading dependency 5 of 429: base-files:amd64=14 Downloading dependency 6 of 429: node-acorn:amd64=8.8.1+ds+~cs25.17.7-2 Downloading dependency 7 of 429: python3-jaraco.context:amd64=6.0.1-1 Downloading dependency 8 of 429: node-argparse:amd64=2.0.1-2 Downloading dependency 9 of 429: libjbig0:amd64=2.1-6.1+b2 Downloading dependency 10 of 429: node-sprintf-js:amd64=1.1.2+ds1+~1.1.2-1 Downloading dependency 11 of 429: libjs-sphinxdoc:amd64=8.2.3-8 Downloading dependency 12 of 429: python3-netcdf4:amd64=1.7.3-1 Downloading dependency 13 of 429: libavif16:amd64=1.3.0-1+b1 Downloading dependency 14 of 429: python3-rlpycairo:amd64=0.3.0-4 Downloading dependency 15 of 429: libjs-mathjax:amd64=2.7.9+dfsg-1 Downloading dependency 16 of 429: libseccomp2:amd64=2.6.0-2 Downloading dependency 17 of 429: libstdc++-15-dev:amd64=15.2.0-5 Downloading dependency 18 of 429: fonts-lyx:amd64=2.4.4-2 Downloading dependency 19 of 429: python3-citeproc:amd64=0.9.0-1 Downloading dependency 20 of 429: python3-mmtf:amd64=1.1.3-1 Downloading dependency 21 of 429: python3-pybtex:amd64=0.25.1-1 Downloading dependency 22 of 429: libaudit-common:amd64=1:4.1.2-1 Downloading dependency 23 of 429: libicu76:amd64=76.1-4 Downloading dependency 24 of 429: rdkit-doc:amd64=202503.6-2 Downloading dependency 25 of 429: python-h5py-doc:amd64=3.14.0-3 Downloading dependency 26 of 429: python3-zopfli:amd64=0.2.3.post1-1+b1 Downloading dependency 27 of 429: blt:amd64=2.5.3+dfsg-8 Downloading dependency 28 of 429: bash:amd64=5.3-1 Downloading dependency 29 of 429: python3-defusedxml:amd64=0.7.1-3 Downloading dependency 30 of 429: libmpc3:amd64=1.3.1-2 Downloading dependency 31 of 429: grep:amd64=3.12-1 Downloading dependency 32 of 429: libssl3t64:amd64=3.5.4-1 Downloading dependency 33 of 429: libpipeline1:amd64=1.5.8-1 Downloading dependency 34 of 429: python3-ufolib2:amd64=0.17.1+dfsg1-1 Downloading dependency 35 of 429: libblas3:amd64=3.12.1-7 Downloading dependency 36 of 429: python3-latexcodec:amd64=3.0.0-1 Downloading dependency 37 of 429: python3-fonttools:amd64=4.57.0-2 Downloading dependency 38 of 429: python3-sympy:amd64=1.14.0-2 Downloading dependency 39 of 429: liblzf1:amd64=3.6-4+b3 Downloading dependency 40 of 429: python3-pytz:amd64=2025.2-4 Downloading dependency 41 of 429: python3-tk:amd64=3.13.9-1 Downloading dependency 42 of 429: cython3:amd64=3.0.11+dfsg-2+b1 Downloading dependency 43 of 429: node-semver:amd64=7.6.1+~7.5.8-2 Downloading dependency 44 of 429: xfonts-utils:amd64=1:7.7+7 Downloading dependency 45 of 429: debhelper:amd64=13.28 Downloading dependency 46 of 429: libffi8:amd64=3.5.2-2 Downloading dependency 47 of 429: node-brace-expansion:amd64=2.0.1+~1.1.0-2 Downloading dependency 48 of 429: libimagequant0:amd64=4.4.0-3 Downloading dependency 49 of 429: libuuid1:amd64=2.41.2-4 Downloading dependency 50 of 429: python3-lxml:amd64=6.0.2-1 Downloading dependency 51 of 429: libxxhash0:amd64=0.8.3-2 Downloading dependency 52 of 429: libpython3-stdlib:amd64=3.13.7-1 Downloading dependency 53 of 429: libtinfo6:amd64=6.5+20250216-2 Downloading dependency 54 of 429: node-minimatch:amd64=9.0.3-6 Downloading dependency 55 of 429: python-babel-localedata:amd64=2.17.0-1 Downloading dependency 56 of 429: libcrypt1:amd64=1:4.4.38-1 Downloading dependency 57 of 429: libssh2-1t64:amd64=1.11.1-1 Downloading dependency 58 of 429: libuv1t64:amd64=1.51.0-2 Downloading dependency 59 of 429: node-cjs-module-lexer:amd64=1.2.3+dfsg-1 Downloading dependency 60 of 429: libperl5.40:amd64=5.40.1-6 Downloading dependency 61 of 429: libk5crypto3:amd64=1.21.3-5 Downloading dependency 62 of 429: libxslt1.1:amd64=1.1.43-0.2 Downloading dependency 63 of 429: libstdc++6:amd64=15.2.0-5 Downloading dependency 64 of 429: python3-typeguard:amd64=4.4.4-1 Downloading dependency 65 of 429: libtasn1-6:amd64=4.20.0-2 Downloading dependency 66 of 429: libxcb1:amd64=1.17.0-2+b1 Downloading dependency 67 of 429: liblsan0:amd64=15.2.0-5 Downloading 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Downloading dependency 84 of 429: python3-lz4:amd64=4.4.4+dfsg-3 Downloading dependency 85 of 429: libdb5.3t64:amd64=5.3.28+dfsg2-10 Downloading dependency 86 of 429: libxss1:amd64=1:1.2.3-1+b3 Downloading dependency 87 of 429: nodejs:amd64=20.19.5+dfsg+~cs20.19.12-4 Downloading dependency 88 of 429: dh-autoreconf:amd64=21 Downloading dependency 89 of 429: libdeflate0:amd64=1.23-2 Downloading dependency 90 of 429: autopoint:amd64=0.23.1-2 Downloading dependency 91 of 429: python3-mpmath:amd64=1.3.0-1 Downloading dependency 92 of 429: python3.13-dev:amd64=3.13.9-1 Downloading dependency 93 of 429: cpp-x86-64-linux-gnu:amd64=4:15.2.0-4 Downloading dependency 94 of 429: hostname:amd64=3.25 Downloading dependency 95 of 429: libsmartcols1:amd64=2.41.2-4 Downloading dependency 96 of 429: dpkg:amd64=1.22.21 Downloading dependency 97 of 429: python3-sphinxcontrib.jquery:amd64=4.1-6 Downloading dependency 98 of 429: liblerc4:amd64=4.0.0+ds-5 Downloading dependency 99 of 429: libqhull-r8.0:amd64=2020.2-7 Downloading dependency 100 of 429: python3-doc:amd64=3.13.7-1 Downloading dependency 101 of 429: rpcsvc-proto:amd64=1.4.3-1 Downloading dependency 102 of 429: libkeyutils1:amd64=1.6.3-6 Downloading dependency 103 of 429: libldap2:amd64=2.6.10+dfsg-1 Downloading dependency 104 of 429: libarchive-zip-perl:amd64=1.68-1 Downloading dependency 105 of 429: python3-roman-numerals:amd64=3.1.0-2 Downloading dependency 106 of 429: python3-jaraco.functools:amd64=4.1.0-1 Downloading dependency 107 of 429: python3-scipy:amd64=1.16.2-2 Downloading dependency 108 of 429: dwz:amd64=0.16-2 Downloading dependency 109 of 429: libmagic1t64:amd64=1:5.46-5 Downloading dependency 110 of 429: libfreetype6:amd64=2.13.3+dfsg-1 Downloading dependency 111 of 429: cpp-15-x86-64-linux-gnu:amd64=15.2.0-5 Downloading dependency 112 of 429: sgml-base:amd64=1.31+nmu1 Downloading dependency 113 of 429: libngtcp2-crypto-gnutls8:amd64=1.16.0-1 Downloading dependency 114 of 429: libxrender1:amd64=1:0.9.12-1 Downloading dependency 115 of 429: python3-autocommand:amd64=2.2.2-3 Downloading dependency 116 of 429: fonts-urw-base35:amd64=20200910-8 Downloading dependency 117 of 429: g++-15-x86-64-linux-gnu:amd64=15.2.0-5 Downloading dependency 118 of 429: libkrb5support0:amd64=1.21.3-5 Downloading dependency 119 of 429: sensible-utils:amd64=0.0.26 Downloading dependency 120 of 429: python3-dev:amd64=3.13.7-1 Downloading dependency 121 of 429: libnghttp3-9:amd64=1.12.0-1 Downloading dependency 122 of 429: libselinux1:amd64=3.9-2 Downloading dependency 123 of 429: python3-cairo:amd64=1.27.0-2 Downloading dependency 124 of 429: bzip2:amd64=1.0.8-6 Downloading dependency 125 of 429: libpixman-1-0:amd64=0.46.4-1 Downloading dependency 126 of 429: node-xtend:amd64=4.0.2-3 Downloading dependency 127 of 429: libcurl4t64:amd64=8.17.0~rc2-1 Downloading dependency 128 of 429: media-types:amd64=14.0.0 Downloading dependency 129 of 429: libctf-nobfd0:amd64=2.45-7 Downloading dependency 130 of 429: libpython3.13-minimal:amd64=3.13.9-1Get:1 http://deb.debian.org/debian unstable/main amd64 libpython3.13-minimal amd64 3.13.9-1 [865 kB] Fetched 865 kB in 0s (67.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpck_3as3v/libpython3.13-minimal_3.13.9-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-sphinxcontrib.applehelp all 2.0.0-1 [18.3 kB] Fetched 18.3 kB in 0s (254 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpchic4vez/python3-sphinxcontrib.applehelp_2.0.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.72-3.1 [494 kB] Fetched 494 kB in 0s (46.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr67v0oz2/autoconf_2.72-3.1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 tar amd64 1.35+dfsg-3.1 [815 kB] Fetched 815 kB in 0s (66.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp8l36tul/tar_1.35+dfsg-3.1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-networkx all 3.4.2-2 [24.2 MB] Fetched 24.2 MB in 0s (82.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_f89liqs/python3-networkx_3.4.2-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpython3.13-dev amd64 3.13.9-1 [5311 kB] Fetched 5311 kB in 0s (138 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpeus6hqkn/libpython3.13-dev_3.13.9-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libmpfr6 amd64 4.2.2-2 [742 kB] Fetched 742 kB in 0s (59.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj46vi42w/libmpfr6_4.2.2-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 sphinx-rtd-theme-common all 3.0.2+dfsg-3 [1023 kB] Fetched 1023 kB in 0s (78.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppavi9quc/sphinx-rtd-theme-common_3.0.2+dfsg-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 gcc amd64 4:15.2.0-4 [5160 B] Fetched 5160 B in 0s (0 B/s) dpkg-name: info: moved 'gcc_4%3a15.2.0-4_amd64.deb' to '/srv/rebuilderd/tmp/tmpfm2dw6n2/gcc_15.2.0-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-freetype all 2.5.1-2 [89.4 kB] Fetched 89.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplek3_0pz/python3-freetype_2.5.1-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgdbm-compat4t64 amd64 1.26-1 [52.8 kB] Fetched 52.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9vylvb9a/libgdbm-compat4t64_1.26-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-contourpy amd64 1.3.1-2 [215 kB] Fetched 215 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd8tjuxa8/python3-contourpy_1.3.1-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-installer all 0.7.0+dfsg1-3 [18.6 kB] Fetched 18.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkossqj6p/python3-installer_0.7.0+dfsg1-3_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main amd64 cpp-15 amd64 15.2.0-5 [1276 B] Fetched 1276 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu7h22ush/cpp-15_15.2.0-5_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251021T083202Z sid/main amd64 libelf1t64 amd64 0.193-3 [192 kB] Fetched 192 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7sknao9k/libelf1t64_0.193-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libcap2 amd64 1:2.75-10+b1 [28.8 kB] Fetched 28.8 kB in 0s (0 B/s) dpkg-name: info: moved 'libcap2_1%3a2.75-10+b1_amd64.deb' to '/srv/rebuilderd/tmp/tmpimhud8pi/libcap2_2.75-10+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 dash amd64 0.5.12-12 [98.5 kB] Fetched 98.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnaewv9oj/dash_0.5.12-12_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libzopfli1 amd64 1.0.3-3 [106 kB] Fetched 106 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphsydqzxt/libzopfli1_1.0.3-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpython3-all-dev amd64 3.13.7-1 [1068 B] Fetched 1068 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpa1mxmjgq/libpython3-all-dev_3.13.7-1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251021T083202Z sid/main amd64 libgnutls30t64 amd64 3.8.10-2 [1484 kB] Fetched 1484 kB in 0s (96.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0blfg59f/libgnutls30t64_3.8.10-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpng16-16t64 amd64 1.6.50-1 [282 kB] Fetched 282 kB in 0s (25.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphyxwbj4x/libpng16-16t64_1.6.50-1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251021T083202Z sid/main amd64 libcurl3t64-gnutls amd64 8.17.0~rc2-1 [400 kB] Fetched 400 kB in 0s (37.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2mc93fwu/libcurl3t64-gnutls_8.17.0~rc2-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libdav1d7 amd64 1.5.1-1 [559 kB] Fetched 559 kB in 0s (49.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpunb4hwor/libdav1d7_1.5.1-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 sphinx-common all 8.2.3-8 [619 kB] Fetched 619 kB in 0s (54.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpf6evq2w_/sphinx-common_8.2.3-8_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-setuptools all 78.1.1-0.1 [738 kB] Fetched 738 kB in 0s (64.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpod0qhaab/python3-setuptools_78.1.1-0.1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 xml-core all 0.19 [20.1 kB] Fetched 20.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppq_d89lb/xml-core_0.19_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libproc2-0 amd64 2:4.0.4-9 [65.6 kB] Fetched 65.6 kB in 0s (0 B/s) dpkg-name: info: moved 'libproc2-0_2%3a4.0.4-9_amd64.deb' to '/srv/rebuilderd/tmp/tmprj4g0176/libproc2-0_4.0.4-9_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-cycler all 0.12.1-2 [9616 B] Fetched 9616 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3_5ytb9t/python3-cycler_0.12.1-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 findutils amd64 4.10.0-3 [700 kB] Fetched 700 kB in 0s (61.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1bfgurfx/findutils_4.10.0-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 node-ms all 2.1.3+~cs0.7.31-3 [5648 B] Fetched 5648 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0cs0iel8/node-ms_2.1.3+~cs0.7.31-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-9 [1187 kB] Fetched 1187 kB in 0s (84.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3f6w9_bc/groff-base_1.23.0-9_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251021T083202Z sid/main amd64 python3-pil.imagetk amd64 11.3.0-1 [81.1 kB] Fetched 81.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwqsae920/python3-pil.imagetk_11.3.0-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-docutils all 0.22.2+dfsg-2 [432 kB] Fetched 432 kB in 0s (40.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp59oboo0t/python3-docutils_0.22.2+dfsg-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgmp10 amd64 2:6.3.0+dfsg-5 [574 kB] Fetched 574 kB in 0s (54.7 MB/s) dpkg-name: info: moved 'libgmp10_2%3a6.3.0+dfsg-5_amd64.deb' to '/srv/rebuilderd/tmp/tmpkim2dn_g/libgmp10_6.3.0+dfsg-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 liblapack3 amd64 3.12.1-7 [2785 kB] Fetched 2785 kB in 0s (125 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4uuf79t4/liblapack3_3.12.1-7_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3.13 amd64 3.13.9-1 [764 kB] Fetched 764 kB in 0s (65.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptc_yj7np/python3.13_3.13.9-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-packaging all 25.0-1 [56.6 kB] Fetched 56.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyw8ik8bu/python3-packaging_25.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 fonts-mathjax all 2.7.9+dfsg-1 [2210 kB] Fetched 2210 kB in 0s (113 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9tanvy42/fonts-mathjax_2.7.9+dfsg-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 readline-common all 8.3-3 [74.8 kB] Fetched 74.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnpjs3zsp/readline-common_8.3-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpython3.13-stdlib amd64 3.13.9-1 [1965 kB] Fetched 1965 kB in 0s (109 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnukwfgki/libpython3.13-stdlib_3.13.9-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libtiff6 amd64 4.7.1-1 [361 kB] Fetched 361 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpa_a4hwjs/libtiff6_4.7.1-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 base-passwd amd64 3.6.7 [53.7 kB] Fetched 53.7 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj3qzuy7h/base-passwd_3.6.7_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libcairo2 amd64 1.18.4-1+b1 [538 kB] Fetched 538 kB in 0s (49.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo_kkzti4/libcairo2_1.18.4-1+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-msmb-theme all 1.2.0-4 [33.8 kB] Fetched 33.8 kB in 0s (375 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpw01a3p4z/python3-msmb-theme_1.2.0-4_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-reportlab all 4.4.4-2 [1170 kB] Fetched 1170 kB in 0s (7016 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptae3ww8k/python3-reportlab_4.4.4-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libllhttp9.3 amd64 9.3.3~really9.3.0+~cs12.11.8-3 [29.3 kB] Fetched 29.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4_0_x_rw/libllhttp9.3_9.3.3~really9.3.0+~cs12.11.8-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-sphinxcontrib.htmlhelp all 2.1.0-1 [21.2 kB] Fetched 21.2 kB in 0s (300 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqexvf0rw/python3-sphinxcontrib.htmlhelp_2.1.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3.13-doc all 3.13.9-1 [15.4 MB] Fetched 15.4 MB in 0s (103 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp05m135nn/python3.13-doc_3.13.9-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main amd64 libatomic1 amd64 15.2.0-5 [9492 B] Fetched 9492 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvvy27e21/libatomic1_15.2.0-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-mono all 2.37-8 [489 kB] Fetched 489 kB in 0s (47.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_35zb18_/fonts-dejavu-mono_2.37-8_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libjpeg62-turbo amd64 1:2.1.5-4 [168 kB] Fetched 168 kB in 0s (0 B/s) dpkg-name: info: moved 'libjpeg62-turbo_1%3a2.1.5-4_amd64.deb' to '/srv/rebuilderd/tmp/tmpeawf41lt/libjpeg62-turbo_2.1.5-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgdbm6t64 amd64 1.26-1 [78.5 kB] Fetched 78.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqekojj4r/libgdbm6t64_1.26-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libblkid1 amd64 2.41.2-4 [174 kB] Fetched 174 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv_3wbvys/libblkid1_2.41.2-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libisl23 amd64 0.27-1 [659 kB] Fetched 659 kB in 0s (57.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0pc8u5ob/libisl23_0.27-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 coreutils amd64 9.7-3 [3024 kB] Fetched 3024 kB in 0s (131 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwu4cu8_0/coreutils_9.7-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libcom-err2 amd64 1.47.2-3+b3 [25.0 kB] Fetched 25.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqw7hr_kj/libcom-err2_1.47.2-3+b3_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251021T083202Z sid/main amd64 python3-numpy amd64 1:2.3.3+ds-3 [5151 kB] Fetched 5151 kB in 0s (145 MB/s) dpkg-name: info: moved 'python3-numpy_1%3a2.3.3+ds-3_amd64.deb' to '/srv/rebuilderd/tmp/tmp0lfgzcnf/python3-numpy_2.3.3+ds-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libbrotli1 amd64 1.1.0-2+b7 [307 kB] Fetched 307 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgn1elylb/libbrotli1_1.1.0-2+b7_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 make amd64 4.4.1-2 [463 kB] Fetched 463 kB in 0s (41.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqj70e6u4/make_4.4.1-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 perl amd64 5.40.1-6 [267 kB] Fetched 267 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc5kv93s4/perl_5.40.1-6_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libwebp7 amd64 1.5.0-0.1 [318 kB] Fetched 318 kB in 0s (30.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp085i2sul/libwebp7_1.5.0-0.1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpam-modules-bin amd64 1.7.0-5 [49.1 kB] Fetched 49.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1zqsoxme/libpam-modules-bin_1.7.0-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxcb-render0 amd64 1.17.0-2+b1 [115 kB] Fetched 115 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd0omtwcj/libxcb-render0_1.17.0-2+b1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251021T083202Z sid/main amd64 python-scipy-doc all 1.16.2-2 [24.8 MB] Fetched 24.8 MB in 0s (53.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4iv49o2k/python-scipy-doc_1.16.2-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libidn2-0 amd64 2.3.8-4 [110 kB] Fetched 110 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1l8pigia/libidn2-0_2.3.8-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libtcl8.6 amd64 8.6.17+dfsg-1 [1041 kB] Fetched 1041 kB in 0s (72.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2pyrnch0/libtcl8.6_8.6.17+dfsg-1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main amd64 g++-15 amd64 15.2.0-5 [24.0 kB] Fetched 24.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnw6c1dw6/g++-15_15.2.0-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 fonts-open-sans all 1.11-2 [574 kB] Fetched 574 kB in 0s (52.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpctfdn4x0/fonts-open-sans_1.11-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251021T083202Z sid/main amd64 libaom3 amd64 3.13.1-1 [1905 kB] Fetched 1905 kB in 0s (103 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl7xkuyxo/libaom3_3.13.1-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libx11-6 amd64 2:1.8.12-1 [815 kB] Fetched 815 kB in 0s (63.5 MB/s) dpkg-name: info: moved 'libx11-6_2%3a1.8.12-1_amd64.deb' to '/srv/rebuilderd/tmp/tmpu179kzp7/libx11-6_1.8.12-1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251021T083202Z sid/main amd64 libgprofng0 amd64 2.45-7 [869 kB] Fetched 869 kB in 0s (66.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_rn4xfzz/libgprofng0_2.45-7_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main amd64 libgomp1 amd64 15.2.0-5 [140 kB] Fetched 140 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuyz5j1dx/libgomp1_15.2.0-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-inflect all 7.5.0-1 [33.0 kB] Fetched 33.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3s4pu9lk/python3-inflect_7.5.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxft2 amd64 2.3.6-1+b4 [54.5 kB] Fetched 54.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkvme0i49/libxft2_2.3.6-1+b4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-certifi all 2025.1.31+ds-1 [9652 B] Fetched 9652 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkqs7kfhq/python3-certifi_2025.1.31+ds-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3.13-tk amd64 3.13.9-1 [108 kB] Fetched 108 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7ljqwyji/python3.13-tk_3.13.9-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libsz2 amd64 1.1.4-2 [8108 B] Fetched 8108 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpw0l17l48/libsz2_1.1.4-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 node-undici all 7.16.0+dfsg+~cs3.2.0-2 [373 kB] Fetched 373 kB in 0s (36.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6nob7m3r/node-undici_7.16.0+dfsg+~cs3.2.0-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 gzip amd64 1.13-1 [138 kB] Fetched 138 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwnk79m03/gzip_1.13-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libexpat1-dev amd64 2.7.3-1 [165 kB] Fetched 165 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmuxttk35/libexpat1-dev_2.7.3-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 ncurses-bin amd64 6.5+20250216-2 [438 kB] Fetched 438 kB in 0s (38.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy1143rlg/ncurses-bin_6.5+20250216-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgpg-error0 amd64 1.56-2 [89.1 kB] Fetched 89.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvyr852ll/libgpg-error0_1.56-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libsqlite3-0 amd64 3.46.1-8 [968 kB] Fetched 968 kB in 0s (75.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpef78mfkm/libsqlite3-0_3.46.1-8_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libwebpdemux2 amd64 1.5.0-0.1 [113 kB] Fetched 113 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpa1q11cl7/libwebpdemux2_1.5.0-0.1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251021T083202Z sid/main amd64 libxml2-16 amd64 2.14.6+dfsg-0.1 [651 kB] Fetched 651 kB in 0s (46.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpeb9q2aw8/libxml2-16_2.14.6+dfsg-0.1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgav1-1 amd64 0.19.0-3+b1 [353 kB] Fetched 353 kB in 0s (33.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmyclwasj/libgav1-1_0.19.0-3+b1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main amd64 libgcc-s1 amd64 15.2.0-5 [71.7 kB] Fetched 71.7 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgkx54o0p/libgcc-s1_15.2.0-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 node-llhttp all 9.3.3~really9.3.0+~cs12.11.8-3 [150 kB] Fetched 150 kB in 0s (14.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1ug2hfz4/node-llhttp_9.3.3~really9.3.0+~cs12.11.8-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libreadline8t64 amd64 8.3-3 [191 kB] Fetched 191 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp280q_uu4/libreadline8t64_8.3-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libmd0 amd64 1.1.0-2+b1 [36.3 kB] Fetched 36.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbda2qji8/libmd0_1.1.0-2+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-snowballstemmer all 3.0.1-1 [63.5 kB] Fetched 63.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqn6d_90a/python3-snowballstemmer_3.0.1-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-babel all 2.17.0-1 [117 kB] Fetched 117 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7ip799ys/python3-babel_2.17.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libtk8.6 amd64 8.6.17-1 [794 kB] Fetched 794 kB in 0s (62.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnztgt8k9/libtk8.6_8.6.17-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libopenjp2-7 amd64 2.5.3-2.1 [204 kB] Fetched 204 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpflj3rp8n/libopenjp2-7_2.5.3-2.1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-sphinxcontrib.serializinghtml all 2.0.0-1 [17.3 kB] Fetched 17.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpamdzxbmy/python3-sphinxcontrib.serializinghtml_2.0.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-threadpoolctl all 3.1.0-1 [21.2 kB] Fetched 21.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6_5r_veh/python3-threadpoolctl_3.1.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 w3c-sgml-lib all 1.3-3 [273 kB] Fetched 273 kB in 0s (2009 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplby43hkx/w3c-sgml-lib_1.3-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-duecredit all 0.10.2-2 [70.6 kB] Fetched 70.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpydx1vyg4/python3-duecredit_0.10.2-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libc-dev-bin amd64 2.41-12 [58.2 kB] Fetched 58.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgmauhbe2/libc-dev-bin_2.41-12_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-platformdirs all 4.4.0-1 [16.7 kB] Fetched 16.7 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplintt65v/python3-platformdirs_4.4.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 debianutils amd64 5.23.2 [92.4 kB] Fetched 92.4 kB in 0s (8674 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6mygsn5u/debianutils_5.23.2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-10 [19.8 kB] Fetched 19.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxdq3ye25/libsasl2-modules-db_2.1.28+dfsg1-10_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251021T083202Z sid/main amd64 python3-pandas all 2.3.3+dfsg-1 [2934 kB] Fetched 2934 kB in 0s (125 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpty2jogw1/python3-pandas_2.3.3+dfsg-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-pytest all 8.4.2-1 [266 kB] Fetched 266 kB in 0s (25.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprxiqgs5c/python3-pytest_8.4.2-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-brotli amd64 1.1.0-2+b7 [320 kB] Fetched 320 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4agskr9v/python3-brotli_1.1.0-2+b7_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.20-2 [325 kB] Fetched 325 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_mvvge0n/m4_1.4.20-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 liblcms2-2 amd64 2.16-2 [160 kB] Fetched 160 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpapx_1rny/liblcms2-2_2.16-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libharfbuzz0b amd64 12.1.0-1 [530 kB] Fetched 530 kB in 0s (45.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp07ryvkau/libharfbuzz0b_12.1.0-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libnettle8t64 amd64 3.10.2-1 [307 kB] Fetched 307 kB in 0s (30.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwtq2uhzb/libnettle8t64_3.10.2-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-tqdm all 4.67.1-6 [90.9 kB] Fetched 90.9 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplxw9f6ab/python3-tqdm_4.67.1-6_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 init-system-helpers all 1.69 [39.3 kB] Fetched 39.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy_rig09_/init-system-helpers_1.69_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main amd64 libtsan2 amd64 15.2.0-5 [2491 kB] Fetched 2491 kB in 0s (117 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppl1tixe2/libtsan2_15.2.0-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libngtcp2-crypto-ossl0 amd64 1.16.0-1 [27.5 kB] Fetched 27.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpf1bx0cri/libngtcp2-crypto-ossl0_1.16.0-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-mrcfile all 1.5.4-2 [118 kB] Fetched 118 kB in 0s (1098 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjpubz9p7/python3-mrcfile_1.5.4-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-sphinx-rtd-theme all 3.0.2+dfsg-3 [29.7 kB] Fetched 29.7 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsbynsppb/python3-sphinx-rtd-theme_3.0.2+dfsg-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libc6 amd64 2.41-12 [2846 kB] Fetched 2846 kB in 0s (109 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpe5eaj06j/libc6_2.41-12_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main amd64 libasan8 amd64 15.2.0-5 [2779 kB] Fetched 2779 kB in 0s (127 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcvhaszss/libasan8_15.2.0-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libc6-dev amd64 2.41-12 [1991 kB] Fetched 1991 kB in 0s (109 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpe1cazbim/libc6-dev_2.41-12_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libncursesw6 amd64 6.5+20250216-2 [135 kB] Fetched 135 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8wi0_9tt/libncursesw6_6.5+20250216-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 procps amd64 2:4.0.4-9 [882 kB] Fetched 882 kB in 0s (66.5 MB/s) dpkg-name: info: moved 'procps_2%3a4.0.4-9_amd64.deb' to '/srv/rebuilderd/tmp/tmpna2er0pq/procps_4.0.4-9_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 librav1e0.8 amd64 0.8.1-5 [976 kB] Fetched 976 kB in 0s (73.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgyy4uht_/librav1e0.8_0.8.1-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-fs all 2.4.16-8 [95.2 kB] Fetched 95.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwi4u2ja0/python3-fs_2.4.16-8_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libattr1 amd64 1:2.5.2-3 [22.9 kB] Fetched 22.9 kB in 0s (0 B/s) dpkg-name: info: moved 'libattr1_1%3a2.5.2-3_amd64.deb' to '/srv/rebuilderd/tmp/tmpsj3jzn8c/libattr1_2.5.2-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxdmcp6 amd64 1:1.1.5-1 [27.8 kB] Fetched 27.8 kB in 0s (0 B/s) dpkg-name: info: moved 'libxdmcp6_1%3a1.1.5-1_amd64.deb' to '/srv/rebuilderd/tmp/tmppjwxnjmq/libxdmcp6_1.1.5-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 perl-base amd64 5.40.1-6 [1666 kB] Fetched 1666 kB in 0s (104 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfj60ieo1/perl-base_5.40.1-6_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 sed amd64 4.9-2 [329 kB] Fetched 329 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_mn7vr2x/sed_4.9-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 tk8.6-blt2.5 amd64 2.5.3+dfsg-8 [591 kB] Fetched 591 kB in 0s (54.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2wcixfv5/tk8.6-blt2.5_2.5.3+dfsg-8_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libglib2.0-0t64 amd64 2.86.1-1 [1546 kB] Fetched 1546 kB in 0s (98.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprbus51yy/libglib2.0-0t64_2.86.1-1_amd64.deb' Downloading dependency 131 of 429: python3-sphinxcontrib.applehelp:amd64=2.0.0-1 Downloading dependency 132 of 429: autoconf:amd64=2.72-3.1 Downloading dependency 133 of 429: tar:amd64=1.35+dfsg-3.1 Downloading dependency 134 of 429: python3-networkx:amd64=3.4.2-2 Downloading dependency 135 of 429: libpython3.13-dev:amd64=3.13.9-1 Downloading dependency 136 of 429: libmpfr6:amd64=4.2.2-2 Downloading dependency 137 of 429: sphinx-rtd-theme-common:amd64=3.0.2+dfsg-3 Downloading dependency 138 of 429: gcc:amd64=4:15.2.0-4 Downloading dependency 139 of 429: python3-freetype:amd64=2.5.1-2 Downloading dependency 140 of 429: libgdbm-compat4t64:amd64=1.26-1 Downloading dependency 141 of 429: 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libbrotli1:amd64=1.1.0-2+b7 Downloading dependency 188 of 429: make:amd64=4.4.1-2 Downloading dependency 189 of 429: perl:amd64=5.40.1-6 Downloading dependency 190 of 429: libwebp7:amd64=1.5.0-0.1 Downloading dependency 191 of 429: libpam-modules-bin:amd64=1.7.0-5 Downloading dependency 192 of 429: libxcb-render0:amd64=1.17.0-2+b1 Downloading dependency 193 of 429: python-scipy-doc:amd64=1.16.2-2 Downloading dependency 194 of 429: libidn2-0:amd64=2.3.8-4 Downloading dependency 195 of 429: libtcl8.6:amd64=8.6.17+dfsg-1 Downloading dependency 196 of 429: g++-15:amd64=15.2.0-5 Downloading dependency 197 of 429: fonts-open-sans:amd64=1.11-2 Downloading dependency 198 of 429: libaom3:amd64=3.13.1-1 Downloading dependency 199 of 429: libx11-6:amd64=2:1.8.12-1 Downloading dependency 200 of 429: libgprofng0:amd64=2.45-7 Downloading dependency 201 of 429: libgomp1:amd64=15.2.0-5 Downloading dependency 202 of 429: python3-inflect:amd64=7.5.0-1 Downloading dependency 203 of 429: 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libreadline8t64:amd64=8.3-3 Downloading dependency 219 of 429: libmd0:amd64=1.1.0-2+b1 Downloading dependency 220 of 429: python3-snowballstemmer:amd64=3.0.1-1 Downloading dependency 221 of 429: python3-babel:amd64=2.17.0-1 Downloading dependency 222 of 429: libtk8.6:amd64=8.6.17-1 Downloading dependency 223 of 429: libopenjp2-7:amd64=2.5.3-2.1 Downloading dependency 224 of 429: python3-sphinxcontrib.serializinghtml:amd64=2.0.0-1 Downloading dependency 225 of 429: python3-threadpoolctl:amd64=3.1.0-1 Downloading dependency 226 of 429: w3c-sgml-lib:amd64=1.3-3 Downloading dependency 227 of 429: python3-duecredit:amd64=0.10.2-2 Downloading dependency 228 of 429: libc-dev-bin:amd64=2.41-12 Downloading dependency 229 of 429: python3-platformdirs:amd64=4.4.0-1 Downloading dependency 230 of 429: debianutils:amd64=5.23.2 Downloading dependency 231 of 429: libsasl2-modules-db:amd64=2.1.28+dfsg1-10 Downloading dependency 232 of 429: python3-pandas:amd64=2.3.3+dfsg-1 Downloading dependency 233 of 429: python3-pytest:amd64=8.4.2-1 Downloading dependency 234 of 429: python3-brotli:amd64=1.1.0-2+b7 Downloading dependency 235 of 429: m4:amd64=1.4.20-2 Downloading dependency 236 of 429: liblcms2-2:amd64=2.16-2 Downloading dependency 237 of 429: libharfbuzz0b:amd64=12.1.0-1 Downloading dependency 238 of 429: libnettle8t64:amd64=3.10.2-1 Downloading dependency 239 of 429: python3-tqdm:amd64=4.67.1-6 Downloading dependency 240 of 429: init-system-helpers:amd64=1.69 Downloading dependency 241 of 429: libtsan2:amd64=15.2.0-5 Downloading dependency 242 of 429: libngtcp2-crypto-ossl0:amd64=1.16.0-1 Downloading dependency 243 of 429: python3-mrcfile:amd64=1.5.4-2 Downloading dependency 244 of 429: python3-sphinx-rtd-theme:amd64=3.0.2+dfsg-3 Downloading dependency 245 of 429: libc6:amd64=2.41-12 Downloading dependency 246 of 429: libasan8:amd64=15.2.0-5 Downloading dependency 247 of 429: libc6-dev:amd64=2.41-12 Downloading dependency 248 of 429: libncursesw6:amd64=6.5+20250216-2 Downloading dependency 249 of 429: procps:amd64=2:4.0.4-9 Downloading dependency 250 of 429: librav1e0.8:amd64=0.8.1-5 Downloading dependency 251 of 429: python3-fs:amd64=2.4.16-8 Downloading dependency 252 of 429: libattr1:amd64=1:2.5.2-3 Downloading dependency 253 of 429: libxdmcp6:amd64=1:1.1.5-1 Downloading dependency 254 of 429: perl-base:amd64=5.40.1-6 Downloading dependency 255 of 429: sed:amd64=4.9-2 Downloading dependency 256 of 429: tk8.6-blt2.5:amd64=2.5.3+dfsg-8 Downloading dependency 257 of 429: libglib2.0-0t64:amd64=2.86.1-1 Downloading dependency 258 of 429: libpsl5t64:amd64=0.21.2-1.1+b1Get:1 http://deb.debian.org/debian unstable/main amd64 libpsl5t64 amd64 0.21.2-1.1+b1 [57.2 kB] Fetched 57.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpofrgldul/libpsl5t64_0.21.2-1.1+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 pybuild-plugin-pyproject all 6.20250414 [11.8 kB] Fetched 11.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppvsp1nb1/pybuild-plugin-pyproject_6.20250414_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.15.0-1 [19.9 kB] Fetched 19.9 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp54lezzjs/libfile-stripnondeterminism-perl_1.15.0-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main amd64 libquadmath0 amd64 15.2.0-5 [145 kB] Fetched 145 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp51mf7ufx/libquadmath0_15.2.0-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpython3-dev amd64 3.13.7-1 [10.5 kB] Fetched 10.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjvlpn2ri/libpython3-dev_3.13.7-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-chardet all 5.2.0+dfsg-2 [108 kB] Fetched 108 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp31lbw166/python3-chardet_5.2.0+dfsg-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libjson-perl all 4.10000-1 [87.5 kB] Fetched 87.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1jjlqs1q/libjson-perl_4.10000-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.text all 4.0.0-1 [11.4 kB] Fetched 11.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpijnv7zsr/python3-jaraco.text_4.0.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-requests all 2.32.5+dfsg-1 [72.4 kB] Fetched 72.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp733lfbg5/python3-requests_2.32.5+dfsg-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-pybtex-docutils all 1.0.3-1 [8224 B] Fetched 8224 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmda795i5/python3-pybtex-docutils_1.0.3-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main amd64 gcc-15 amd64 15.2.0-5 [525 kB] Fetched 525 kB in 0s (47.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz3cxd1u2/gcc-15_15.2.0-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-h5py-serial amd64 3.14.0-3 [1157 kB] Fetched 1157 kB in 0s (80.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpixv93tyl/python3-h5py-serial_3.14.0-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-10 [57.8 kB] Fetched 57.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpym9cd_l6/libsasl2-2_2.1.28+dfsg1-10_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-wheel all 0.46.1-2 [21.7 kB] Fetched 21.7 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl2nmkr3e/python3-wheel_0.46.1-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 dh-python all 6.20250414 [116 kB] Fetched 116 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjgest2pp/dh-python_6.20250414_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main amd64 gcc-15-x86-64-linux-gnu amd64 15.2.0-5 [23.3 MB] Fetched 23.3 MB in 0s (85.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpe9qit11u/gcc-15-x86-64-linux-gnu_15.2.0-5_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251021T083202Z sid/main amd64 python3-biopython amd64 1.85+dfsg-5 [1674 kB] Fetched 1674 kB in 0s (4965 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprr32tbb8/python3-biopython_1.85+dfsg-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 node-js-yaml all 4.1.0+dfsg+~4.0.5-7 [66.6 kB] Fetched 66.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuzp7rp_4/node-js-yaml_4.1.0+dfsg+~4.0.5-7_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251021T083202Z sid/main amd64 python-matplotlib-data all 3.10.1+dfsg1-6 [2737 kB] Fetched 2737 kB in 0s (126 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpckgtdnj_/python-matplotlib-data_3.10.1+dfsg1-6_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-alabaster all 0.7.16-0.1 [27.9 kB] Fetched 27.9 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkj34rjj3/python3-alabaster_0.7.16-0.1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgcrypt20 amd64 1.11.2-2 [865 kB] Fetched 865 kB in 0s (60.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsb5p1tvj/libgcrypt20_1.11.2-2_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251021T083202Z sid/main amd64 binutils-common amd64 2.45-7 [2558 kB] Fetched 2558 kB in 0s (110 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnuz_mi98/binutils-common_2.45-7_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libaec0 amd64 1.1.4-2 [23.8 kB] Fetched 23.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxeikqu40/libaec0_1.1.4-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-attr all 25.4.0-1 [73.1 kB] Fetched 73.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgywa1ma2/python3-attr_25.4.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-pkg-resources all 78.1.1-0.1 [224 kB] Fetched 224 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyygqzvq8/python3-pkg-resources_78.1.1-0.1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.23.1-2+b1 [244 kB] Fetched 244 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnqvzb19o/gettext-base_0.23.1-2+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 netbase all 6.5 [12.4 kB] Fetched 12.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqyswoewe/netbase_6.5_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 g++-x86-64-linux-gnu amd64 4:15.2.0-4 [1196 B] Fetched 1196 B in 0s (0 B/s) dpkg-name: info: moved 'g++-x86-64-linux-gnu_4%3a15.2.0-4_amd64.deb' to '/srv/rebuilderd/tmp/tmpv3usm877/g++-x86-64-linux-gnu_15.2.0-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpam-modules amd64 1.7.0-5 [179 kB] Fetched 179 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpf_2n6mln/libpam-modules_1.7.0-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-looseversion all 1.3.0-3 [8964 B] Fetched 8964 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_5tpyod9/python3-looseversion_1.3.0-3_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251021T083202Z sid/main amd64 python3-matplotlib amd64 3.10.1+dfsg1-6 [23.8 MB] Fetched 23.8 MB in 0s (73.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp058rt8v0/python3-matplotlib_3.10.1+dfsg1-6_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251021T083202Z sid/main amd64 python-gsd-doc all 4.0.0-1 [131 kB] Fetched 131 kB in 0s (640 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv88rehs0/python-gsd-doc_4.0.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-core all 2.37-8 [840 kB] Fetched 840 kB in 0s (69.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmvkxsw_i/fonts-dejavu-core_2.37-8_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 node-balanced-match all 2.0.0-1 [4872 B] Fetched 4872 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuzcx1omc/node-balanced-match_2.0.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 debconf all 1.5.91 [121 kB] Fetched 121 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp08s5tyfn/debconf_1.5.91_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Fetched 116 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgas7cu5z/libjs-underscore_1.13.4~dfsg+~1.11.4-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-cftime amd64 1.6.5-1 [396 kB] Fetched 396 kB in 0s (38.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbi6ly6wz/python3-cftime_1.6.5-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libunistring5 amd64 1.3-2 [477 kB] Fetched 477 kB in 0s (41.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu42z_78l/libunistring5_1.3-2_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main amd64 libubsan1 amd64 15.2.0-5 [1108 kB] Fetched 1108 kB in 0s (80.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3aybdmvm/libubsan1_15.2.0-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-2 [68.5 kB] Fetched 68.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmlpsmvj1/libuchardet0_0.0.8-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-fasteners all 0.19-2 [14.4 kB] Fetched 14.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpiophkbti/python3-fasteners_0.19-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libjansson4 amd64 2.14-2+b3 [39.8 kB] Fetched 39.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp74ib0sjk/libjansson4_2.14-2+b3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 openssl amd64 3.5.4-1 [1496 kB] Fetched 1496 kB in 0s (96.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp10er1qiu/openssl_3.5.4-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.18.1-2 [877 kB] Fetched 877 kB in 0s (68.7 MB/s) dpkg-name: info: moved 'automake_1%3a1.18.1-2_all.deb' to '/srv/rebuilderd/tmp/tmpywqfh586/automake_1.18.1-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251021T083202Z sid/main amd64 binutils-x86-64-linux-gnu amd64 2.45-7 [1097 kB] Fetched 1097 kB in 0s (82.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptq7hqffy/binutils-x86-64-linux-gnu_2.45-7_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.15.0-1 [8812 B] Fetched 8812 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkfotxbq7/dh-strip-nondeterminism_1.15.0-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251021T083202Z sid/main amd64 libctf0 amd64 2.45-7 [100 kB] Fetched 100 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd5tppx6e/libctf0_2.45-7_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251021T083202Z sid/main amd64 python3-iniconfig all 1.1.1-2 [6396 B] Fetched 6396 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxwciig0z/python3-iniconfig_1.1.1-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 x11-common all 1:7.7+26 [217 kB] Fetched 217 kB in 0s (21.4 MB/s) dpkg-name: info: moved 'x11-common_1%3a7.7+26_all.deb' to '/srv/rebuilderd/tmp/tmpqsk5rnzz/x11-common_7.7+26_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 linux-libc-dev all 6.16.12-2 [2547 kB] Fetched 2547 kB in 0s (121 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4hxx03_9/linux-libc-dev_6.16.12-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-urllib3 all 2.5.0-1 [116 kB] Fetched 116 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpw90hpm8e/python3-urllib3_2.5.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 node-esprima all 4.0.1+ds+~4.0.3-2 [69.3 kB] Fetched 69.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6xb7rvgr/node-esprima_4.0.1+ds+~4.0.3-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main amd64 libgfortran5 amd64 15.2.0-5 [862 kB] Fetched 862 kB in 0s (59.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp44hxtxs3/libgfortran5_15.2.0-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libx11-data all 2:1.8.12-1 [343 kB] Fetched 343 kB in 0s (33.6 MB/s) dpkg-name: info: moved 'libx11-data_2%3a1.8.12-1_all.deb' to '/srv/rebuilderd/tmp/tmpcwc5tcpf/libx11-data_1.8.12-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-sortedcontainers all 2.4.0-2 [31.9 kB] Fetched 31.9 kB in 0s (3033 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnd94mg05/python3-sortedcontainers_2.4.0-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.21.3-5 [138 kB] Fetched 138 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph_gw0524/libgssapi-krb5-2_1.21.3-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-charset-normalizer amd64 3.4.3-1 [131 kB] Fetched 131 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzy25my9c/python3-charset-normalizer_3.4.3-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-yaml amd64 6.0.2-2 [137 kB] Fetched 137 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5onq1a6t/python3-yaml_6.0.2-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 util-linux amd64 2.41.2-4 [1163 kB] Fetched 1163 kB in 0s (85.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6qdbqxi8/util-linux_2.41.2-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-mda-xdrlib all 0.2.0-3 [11.6 kB] Fetched 11.6 kB in 0s (163 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpinb0wg3z/python3-mda-xdrlib_0.2.0-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 zlib1g amd64 1:1.3.dfsg+really1.3.1-1+b1 [88.9 kB] Fetched 88.9 kB in 0s (0 B/s) dpkg-name: info: moved 'zlib1g_1%3a1.3.dfsg+really1.3.1-1+b1_amd64.deb' to '/srv/rebuilderd/tmp/tmp6lf569t9/zlib1g_1.3.dfsg+really1.3.1-1+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libsharpyuv0 amd64 1.5.0-0.1 [116 kB] Fetched 116 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp48pbkao8/libsharpyuv0_1.5.0-0.1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libabsl20240722 amd64 20240722.0-4 [492 kB] Fetched 492 kB in 0s (45.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4uw52jn_/libabsl20240722_20240722.0-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpam-runtime all 1.7.0-5 [249 kB] Fetched 249 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp96qzhvb_/libpam-runtime_1.7.0-5_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-msgpack amd64 1.0.3-3+b4 [84.5 kB] Fetched 84.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp63wunjif/python3-msgpack_1.0.3-3+b4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3.13-minimal amd64 3.13.9-1 [2257 kB] Fetched 2257 kB in 0s (117 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzk23c9wb/python3.13-minimal_3.13.9-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpython3.13 amd64 3.13.9-1 [2184 kB] Fetched 2184 kB in 0s (112 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvhf8n86g/libpython3.13_3.13.9-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgraphite2-3 amd64 1.3.14-11 [76.7 kB] Fetched 76.7 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkcujp7ta/libgraphite2-3_1.3.14-11_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251021T083202Z sid/main amd64 libudev1 amd64 258.1-1 [156 kB] Fetched 156 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpf_30ennu/libudev1_258.1-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-more-itertools all 10.8.0-1 [71.7 kB] Fetched 71.7 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpa906mj22/python3-more-itertools_10.8.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libp11-kit0 amd64 0.25.9-2 [443 kB] Fetched 443 kB in 0s (42.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvjzl_xeb/libp11-kit0_0.25.9-2_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251021T083202Z sid/main amd64 python3-gsd amd64 4.0.0-1 [209 kB] Fetched 209 kB in 0s (1083 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuqe4xlt3/python3-gsd_4.0.0-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-pyproject-hooks all 1.2.0-1 [11.7 kB] Fetched 11.7 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj5datzuo/python3-pyproject-hooks_1.2.0-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251021T083202Z sid/main amd64 libsystemd0 amd64 258.1-1 [467 kB] Fetched 467 kB in 0s (46.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptdu9ksri/libsystemd0_258.1-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libyaml-0-2 amd64 0.2.5-2 [52.5 kB] Fetched 52.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkav7hdri/libyaml-0-2_0.2.5-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-monotonic all 1.6-3 [5340 B] Fetched 5340 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpeoxve8s4/python3-monotonic_1.6-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libkrb5-3 amd64 1.21.3-5 [326 kB] Fetched 326 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoixnkc4j/libkrb5-3_1.21.3-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-3 [58.3 kB] Fetched 58.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp86fi1yv1/librtmp1_2.4+20151223.gitfa8646d.1-3_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main amd64 libhwasan0 amd64 15.2.0-5 [1537 kB] Fetched 1537 kB in 0s (101 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcut23ley/libhwasan0_15.2.0-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-idna all 3.10-1 [42.0 kB] Fetched 42.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppzr57_y2/python3-idna_3.10-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-joblib all 1.4.2-5 [216 kB] Fetched 216 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9963l0lb/python3-joblib_1.4.2-5_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251021T083202Z sid/main amd64 liblz4-1 amd64 1.10.0-4 [63.9 kB] Fetched 63.9 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpehymcoii/liblz4-1_1.10.0-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.23.1-2+b1 [1680 kB] Fetched 1680 kB in 0s (101 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpacl0d5la/gettext_0.23.1-2+b1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251021T083202Z sid/main amd64 python-matplotlib-doc all 3.10.1+dfsg1-6 [170 MB] Fetched 170 MB in 5s (34.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4ayst_08/python-matplotlib-doc_3.10.1+dfsg1-6_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-sphinx-sitemap all 2.6.0-1 [8508 B] Fetched 8508 B in 0s (127 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpczzw72cn/python3-sphinx-sitemap_2.6.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-dateutil all 2.9.0-4 [79.4 kB] Fetched 79.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcpfrbiyh/python3-dateutil_2.9.0-4_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251021T083202Z sid/main amd64 libbinutils amd64 2.45-7 [580 kB] Fetched 580 kB in 0s (51.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnkrwehjc/libbinutils_2.45-7_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libfontconfig1 amd64 2.15.0-2.4 [401 kB] Fetched 401 kB in 0s (37.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3x2f8rdj/libfontconfig1_2.15.0-2.4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpcre2-8-0 amd64 10.46-1 [298 kB] Fetched 298 kB in 0s (28.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp49wyl6ga/libpcre2-8-0_10.46-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-pluggy all 1.6.0-1 [27.1 kB] Fetched 27.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3xwa25jv/python3-pluggy_1.6.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1+b1 [920 kB] Fetched 920 kB in 0s (70.6 MB/s) dpkg-name: info: moved 'zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1+b1_amd64.deb' to '/srv/rebuilderd/tmp/tmpzmlmmgub/zlib1g-dev_1.3.dfsg+really1.3.1-1+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libfontenc1 amd64 1:1.1.8-1+b2 [23.3 kB] Fetched 23.3 kB in 0s (0 B/s) dpkg-name: info: moved 'libfontenc1_1%3a1.1.8-1+b2_amd64.deb' to '/srv/rebuilderd/tmp/tmplgqg23bc/libfontenc1_1.1.8-1+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-seaborn all 0.13.2-5 [215 kB] Fetched 215 kB in 0s (20.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkwsxi6gg/python3-seaborn_0.13.2-5_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxext6 amd64 2:1.3.4-1+b3 [50.4 kB] Fetched 50.4 kB in 0s (0 B/s) dpkg-name: info: moved 'libxext6_2%3a1.3.4-1+b3_amd64.deb' to '/srv/rebuilderd/tmp/tmp0ujnbtsf/libxext6_1.3.4-1+b3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-sphinxcontrib.qthelp all 2.0.0-1 [16.1 kB] Fetched 16.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps8ch6wnl/python3-sphinxcontrib.qthelp_2.0.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20240727.1 [60.2 kB] Fetched 60.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuhuuawhr/autotools-dev_20240727.1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main amd64 gcc-15-base amd64 15.2.0-5 [53.1 kB] Fetched 53.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpk__kmfzc/gcc-15-base_15.2.0-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python-dask-doc all 2024.12.1+dfsg-2 [10.8 MB] Fetched 10.8 MB in 0s (141 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvay5ajaz/python-dask-doc_2024.12.1+dfsg-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libexpat1 amd64 2.7.3-1 [112 kB] Fetched 112 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpf46vtayt/libexpat1_2.7.3-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libngtcp2-16 amd64 1.16.0-1 [136 kB] Fetched 136 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdpou2tz6/libngtcp2-16_1.16.0-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libcares2 amd64 1.34.5-1 [98.2 kB] Fetched 98.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz_su6pet/libcares2_1.34.5-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-kiwisolver amd64 1.4.10~rc0-1 [61.9 kB] Fetched 61.9 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpolno8jgo/python3-kiwisolver_1.4.10~rc0-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libfribidi0 amd64 1.0.16-3 [26.6 kB] Fetched 26.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp76lm7rd8/libfribidi0_1.0.16-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 mawk amd64 1.3.4.20250131-1 [141 kB] Fetched 141 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvpo6ci9u/mawk_1.3.4.20250131-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-sklearn all 1.7.2+dfsg-3 [2601 kB] Fetched 2601 kB in 0s (12.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwddxu6oc/python3-sklearn_1.7.2+dfsg-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libc-bin amd64 2.41-12 [637 kB] Fetched 637 kB in 0s (53.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr7nxm6nq/libc-bin_2.41-12_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 perl-modules-5.40 all 5.40.1-6 [3019 kB] Fetched 3019 kB in 0s (128 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbjwvr8lj/perl-modules-5.40_5.40.1-6_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251021T083202Z sid/main amd64 binutils amd64 2.45-7 [269 kB] Fetched 269 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1d6br4ex/binutils_2.45-7_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251021T083202Z sid/main amd64 python3-pil amd64 11.3.0-1 [526 kB] Fetched 526 kB in 0s (47.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz68h_72o/python3-pil_11.3.0-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-sphinxcontrib.devhelp all 2.0.0-1 [13.9 kB] Fetched 13.9 kB in 0s (201 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl8oh9tn2/python3-sphinxcontrib.devhelp_2.0.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libacl1 amd64 2.3.2-2+b1 [32.9 kB] Fetched 32.9 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppkhhkqat/libacl1_2.3.2-2+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 ncurses-base all 6.5+20250216-2 [273 kB] Fetched 273 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwh7idjwv/ncurses-base_6.5+20250216-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libaudit1 amd64 1:4.1.2-1 [60.4 kB] Fetched 60.4 kB in 0s (0 B/s) dpkg-name: info: moved 'libaudit1_1%3a4.1.2-1_amd64.deb' to '/srv/rebuilderd/tmp/tmpi4eg3adk/libaudit1_4.1.2-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libzstd1 amd64 1.5.7+dfsg-2 [308 kB] Fetched 308 kB in 0s (30.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr4m099e1/libzstd1_1.5.7+dfsg-2_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251021T083202Z sid/main amd64 libsframe2 amd64 2.45-7 [81.0 kB] Fetched 81.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp76ujwjdd/libsframe2_2.45-7_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Fetched 22.9 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4yg0blt4/intltool-debian_0.35.0+20060710.6_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 dpkg-dev all 1.22.21 [1338 kB] Fetched 1338 kB in 0s (90.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpin0zfdlm/dpkg-dev_1.22.21_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 docutils-common all 0.22.2+dfsg-2 [128 kB] Fetched 128 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8ecj51tq/docutils-common_0.22.2+dfsg-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.28 [92.4 kB] Fetched 92.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpf9c8wjdv/libdebhelper-perl_13.28_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-filelock all 3.20.0-1 [12.6 kB] Fetched 12.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpw861o1z9/python3-filelock_3.20.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 fonts-lato all 2.015-1 [2780 kB] Fetched 2780 kB in 0s (114 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp972utjfk/fonts-lato_2.015-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.41.2-4 [98.5 kB] Fetched 98.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0l7plfl2/bsdextrautils_2.41.2-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 build-essential amd64 12.12 [4624 B] Fetched 4624 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpywep99s7/build-essential_12.12_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-all-dev amd64 3.13.7-1 [1068 B] Fetched 1068 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp127jd860/python3-all-dev_3.13.7-1_amd64.deb' Downloading dependency 259 of 429: pybuild-plugin-pyproject:amd64=6.20250414 Downloading dependency 260 of 429: libfile-stripnondeterminism-perl:amd64=1.15.0-1 Downloading dependency 261 of 429: libquadmath0:amd64=15.2.0-5 Downloading dependency 262 of 429: libpython3-dev:amd64=3.13.7-1 Downloading dependency 263 of 429: python3-chardet:amd64=5.2.0+dfsg-2 Downloading dependency 264 of 429: libjson-perl:amd64=4.10000-1 Downloading dependency 265 of 429: python3-jaraco.text:amd64=4.0.0-1 Downloading dependency 266 of 429: python3-requests:amd64=2.32.5+dfsg-1 Downloading dependency 267 of 429: python3-pybtex-docutils:amd64=1.0.3-1 Downloading dependency 268 of 429: gcc-15:amd64=15.2.0-5 Downloading dependency 269 of 429: python3-h5py-serial:amd64=3.14.0-3 Downloading dependency 270 of 429: libsasl2-2:amd64=2.1.28+dfsg1-10 Downloading dependency 271 of 429: python3-wheel:amd64=0.46.1-2 Downloading dependency 272 of 429: dh-python:amd64=6.20250414 Downloading dependency 273 of 429: gcc-15-x86-64-linux-gnu:amd64=15.2.0-5 Downloading dependency 274 of 429: python3-biopython:amd64=1.85+dfsg-5 Downloading dependency 275 of 429: node-js-yaml:amd64=4.1.0+dfsg+~4.0.5-7 Downloading dependency 276 of 429: python-matplotlib-data:amd64=3.10.1+dfsg1-6 Downloading dependency 277 of 429: python3-alabaster:amd64=0.7.16-0.1 Downloading dependency 278 of 429: 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python3-urllib3:amd64=2.5.0-1 Downloading dependency 309 of 429: node-esprima:amd64=4.0.1+ds+~4.0.3-2 Downloading dependency 310 of 429: libgfortran5:amd64=15.2.0-5 Downloading dependency 311 of 429: libx11-data:amd64=2:1.8.12-1 Downloading dependency 312 of 429: python3-sortedcontainers:amd64=2.4.0-2 Downloading dependency 313 of 429: libgssapi-krb5-2:amd64=1.21.3-5 Downloading dependency 314 of 429: python3-charset-normalizer:amd64=3.4.3-1 Downloading dependency 315 of 429: python3-yaml:amd64=6.0.2-2 Downloading dependency 316 of 429: util-linux:amd64=2.41.2-4 Downloading dependency 317 of 429: python3-mda-xdrlib:amd64=0.2.0-3 Downloading dependency 318 of 429: zlib1g:amd64=1:1.3.dfsg+really1.3.1-1+b1 Downloading dependency 319 of 429: libsharpyuv0:amd64=1.5.0-0.1 Downloading dependency 320 of 429: libabsl20240722:amd64=20240722.0-4 Downloading dependency 321 of 429: libpam-runtime:amd64=1.7.0-5 Downloading dependency 322 of 429: python3-msgpack:amd64=1.0.3-3+b4 Downloading dependency 323 of 429: python3.13-minimal:amd64=3.13.9-1 Downloading dependency 324 of 429: libpython3.13:amd64=3.13.9-1 Downloading dependency 325 of 429: libgraphite2-3:amd64=1.3.14-11 Downloading dependency 326 of 429: libudev1:amd64=258.1-1 Downloading dependency 327 of 429: python3-more-itertools:amd64=10.8.0-1 Downloading dependency 328 of 429: libp11-kit0:amd64=0.25.9-2 Downloading dependency 329 of 429: python3-gsd:amd64=4.0.0-1 Downloading dependency 330 of 429: python3-pyproject-hooks:amd64=1.2.0-1 Downloading dependency 331 of 429: libsystemd0:amd64=258.1-1 Downloading dependency 332 of 429: libyaml-0-2:amd64=0.2.5-2 Downloading dependency 333 of 429: python3-monotonic:amd64=1.6-3 Downloading dependency 334 of 429: libkrb5-3:amd64=1.21.3-5 Downloading dependency 335 of 429: librtmp1:amd64=2.4+20151223.gitfa8646d.1-3 Downloading dependency 336 of 429: libhwasan0:amd64=15.2.0-5 Downloading dependency 337 of 429: python3-idna:amd64=3.10-1 Downloading dependency 338 of 429: python3-joblib:amd64=1.4.2-5 Downloading dependency 339 of 429: liblz4-1:amd64=1.10.0-4 Downloading dependency 340 of 429: gettext:amd64=0.23.1-2+b1 Downloading dependency 341 of 429: python-matplotlib-doc:amd64=3.10.1+dfsg1-6 Downloading dependency 342 of 429: python3-sphinx-sitemap:amd64=2.6.0-1 Downloading dependency 343 of 429: python3-dateutil:amd64=2.9.0-4 Downloading dependency 344 of 429: libbinutils:amd64=2.45-7 Downloading dependency 345 of 429: libfontconfig1:amd64=2.15.0-2.4 Downloading dependency 346 of 429: libpcre2-8-0:amd64=10.46-1 Downloading dependency 347 of 429: python3-pluggy:amd64=1.6.0-1 Downloading dependency 348 of 429: zlib1g-dev:amd64=1:1.3.dfsg+really1.3.1-1+b1 Downloading dependency 349 of 429: libfontenc1:amd64=1:1.1.8-1+b2 Downloading dependency 350 of 429: python3-seaborn:amd64=0.13.2-5 Downloading dependency 351 of 429: libxext6:amd64=2:1.3.4-1+b3 Downloading dependency 352 of 429: python3-sphinxcontrib.qthelp:amd64=2.0.0-1 Downloading dependency 353 of 429: autotools-dev:amd64=20240727.1 Downloading dependency 354 of 429: gcc-15-base:amd64=15.2.0-5 Downloading dependency 355 of 429: python-dask-doc:amd64=2024.12.1+dfsg-2 Downloading dependency 356 of 429: libexpat1:amd64=2.7.3-1 Downloading dependency 357 of 429: libngtcp2-16:amd64=1.16.0-1 Downloading dependency 358 of 429: libcares2:amd64=1.34.5-1 Downloading dependency 359 of 429: python3-kiwisolver:amd64=1.4.10~rc0-1 Downloading dependency 360 of 429: libfribidi0:amd64=1.0.16-3 Downloading dependency 361 of 429: mawk:amd64=1.3.4.20250131-1 Downloading dependency 362 of 429: python3-sklearn:amd64=1.7.2+dfsg-3 Downloading dependency 363 of 429: libc-bin:amd64=2.41-12 Downloading dependency 364 of 429: perl-modules-5.40:amd64=5.40.1-6 Downloading dependency 365 of 429: binutils:amd64=2.45-7 Downloading dependency 366 of 429: python3-pil:amd64=11.3.0-1 Downloading dependency 367 of 429: python3-sphinxcontrib.devhelp:amd64=2.0.0-1 Downloading dependency 368 of 429: libacl1:amd64=2.3.2-2+b1 Downloading dependency 369 of 429: ncurses-base:amd64=6.5+20250216-2 Downloading dependency 370 of 429: libaudit1:amd64=1:4.1.2-1 Downloading dependency 371 of 429: libzstd1:amd64=1.5.7+dfsg-2 Downloading dependency 372 of 429: libsframe2:amd64=2.45-7 Downloading dependency 373 of 429: intltool-debian:amd64=0.35.0+20060710.6 Downloading dependency 374 of 429: dpkg-dev:amd64=1.22.21 Downloading dependency 375 of 429: docutils-common:amd64=0.22.2+dfsg-2 Downloading dependency 376 of 429: libdebhelper-perl:amd64=13.28 Downloading dependency 377 of 429: python3-filelock:amd64=3.20.0-1 Downloading dependency 378 of 429: fonts-lato:amd64=2.015-1 Downloading dependency 379 of 429: bsdextrautils:amd64=2.41.2-4 Downloading dependency 380 of 429: build-essential:amd64=12.12 Downloading dependency 381 of 429: python3-all-dev:amd64=3.13.7-1 Downloading dependency 382 of 429: openssl-provider-legacy:amd64=3.5.4-1Get:1 http://deb.debian.org/debian unstable/main amd64 openssl-provider-legacy amd64 3.5.4-1 [308 kB] Fetched 308 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4favt7w4/openssl-provider-legacy_3.5.4-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-sphinxcontrib.bibtex all 2.6.5-3 [33.2 kB] Fetched 33.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpq_uf3xwg/python3-sphinxcontrib.bibtex_2.6.5-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpam0g amd64 1.7.0-5 [69.9 kB] Fetched 69.9 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp02j6llj1/libpam0g_1.7.0-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3 amd64 3.13.7-1 [28.3 kB] Fetched 28.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptv45b17t/python3_3.13.7-1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251021T083202Z sid/main amd64 python3-numpy-dev amd64 1:2.3.3+ds-3 [138 kB] Fetched 138 kB in 0s (0 B/s) dpkg-name: info: moved 'python3-numpy-dev_1%3a2.3.3+ds-3_amd64.deb' to '/srv/rebuilderd/tmp/tmprjehy269/python3-numpy-dev_2.3.3+ds-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.1-1 [1469 kB] Fetched 1469 kB in 0s (92.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkafnebl_/man-db_2.13.1-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-markupsafe amd64 3.0.3-1 [13.8 kB] Fetched 13.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmkptotn6/python3-markupsafe_3.0.3-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Fetched 248 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvtaspdzs/po-debconf_1.0.21+nmu1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-zipp all 3.23.0-1 [11.0 kB] Fetched 11.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0iobuyrl/python3-zipp_3.23.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libyuv0 amd64 0.0.1919.20250919-1 [175 kB] Fetched 175 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4ljypqg3/libyuv0_0.0.1919.20250919-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 liblzma5 amd64 5.8.1-2 [310 kB] Fetched 310 kB in 0s (30.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu69s8y6y/liblzma5_5.8.1-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libwebpmux3 amd64 1.5.0-0.1 [126 kB] Fetched 126 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8s4llvg3/libwebpmux3_1.5.0-0.1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libhdf5-hl-310 amd64 1.14.5+repack-4 [72.6 kB] Fetched 72.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_slbdetd/libhdf5-hl-310_1.14.5+repack-4_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251022T143047Z sid/main amd64 libgcc-15-dev amd64 15.2.0-5 [2719 kB] Fetched 2719 kB in 0s (118 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8t531gfs/libgcc-15-dev_15.2.0-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 node-lru-cache all 10.0.1-3 [62.6 kB] Fetched 62.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz1vbist6/node-lru-cache_10.0.1-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-griddataformats all 1.0.2-2 [2048 kB] Fetched 2048 kB in 0s (10.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwv3st6mn/python3-griddataformats_1.0.2-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxau6 amd64 1:1.0.11-1 [20.4 kB] Fetched 20.4 kB in 0s (0 B/s) dpkg-name: info: moved 'libxau6_1%3a1.0.11-1_amd64.deb' to '/srv/rebuilderd/tmp/tmpskehffo8/libxau6_1.0.11-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 unicode-data all 16.0.0-1 [9197 kB] Fetched 9197 kB in 0s (168 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdw5sxgeb/unicode-data_16.0.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 cpp amd64 4:15.2.0-4 [1564 B] Fetched 1564 B in 0s (0 B/s) dpkg-name: info: moved 'cpp_4%3a15.2.0-4_amd64.deb' to '/srv/rebuilderd/tmp/tmpnyxj0ki5/cpp_15.2.0-4_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251021T083202Z sid/main amd64 python3-pandas-lib amd64 2.3.3+dfsg-1 [4360 kB] Fetched 4360 kB in 0s (134 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppbmmin92/python3-pandas-lib_2.3.3+dfsg-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libnetcdf22 amd64 1:4.9.3-1+b1 [517 kB] Fetched 517 kB in 0s (46.6 MB/s) dpkg-name: info: moved 'libnetcdf22_1%3a4.9.3-1+b1_amd64.deb' to '/srv/rebuilderd/tmp/tmpxh82elu9/libnetcdf22_4.9.3-1+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [517 kB] Fetched 517 kB in 0s (49.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcirbsu09/fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 ca-certificates all 20250419 [162 kB] Fetched 162 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkc6numw3/ca-certificates_20250419_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-typing-extensions all 4.15.0-1 [92.4 kB] Fetched 92.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfeckoay9/python3-typing-extensions_4.15.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libhogweed6t64 amd64 3.10.2-1 [336 kB] Fetched 336 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp11e785cy/libhogweed6t64_3.10.2-1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251021T083202Z sid/main amd64 sysvinit-utils amd64 3.14-4 [34.1 kB] Fetched 34.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdhx44lf5/sysvinit-utils_3.14-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libhdf5-310 amd64 1.14.5+repack-4 [1448 kB] Fetched 1448 kB in 0s (92.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpas27cq_4/libhdf5-310_1.14.5+repack-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxcb-shm0 amd64 1.17.0-2+b1 [105 kB] Fetched 105 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppop7b890/libxcb-shm0_1.17.0-2+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.46-5 [43.6 kB] Fetched 43.6 kB in 0s (0 B/s) dpkg-name: info: moved 'file_1%3a5.46-5_amd64.deb' to '/srv/rebuilderd/tmp/tmp7ivfvtct/file_5.46-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libtool all 2.5.4-7 [540 kB] Fetched 540 kB in 0s (47.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd5u05i6x/libtool_2.5.4-7_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libsvtav1enc2 amd64 2.3.0+dfsg-1 [2489 kB] Fetched 2489 kB in 0s (116 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptnz7t8ln/libsvtav1enc2_2.3.0+dfsg-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.46-5 [338 kB] Fetched 338 kB in 0s (33.2 MB/s) dpkg-name: info: moved 'libmagic-mgc_1%3a5.46-5_amd64.deb' to '/srv/rebuilderd/tmp/tmpjdl95ktz/libmagic-mgc_5.46-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 fontconfig-config amd64 2.15.0-2.4 [318 kB] Fetched 318 kB in 0s (31.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpe0hjy1qv/fontconfig-config_2.15.0-2.4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libdebconfclient0 amd64 0.280 [10.6 kB] Fetched 10.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnk6guxk1/libdebconfclient0_0.280_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libnode115 amd64 20.19.5+dfsg+~cs20.19.12-4 [12.3 MB] Fetched 12.3 MB in 0s (124 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp888ojbg7/libnode115_20.19.5+dfsg+~cs20.19.12-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libbz2-1.0 amd64 1.0.8-6 [37.9 kB] Fetched 37.9 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpims2_on9/libbz2-1.0_1.0.8-6_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-sphinx all 8.2.3-8 [477 kB] Fetched 477 kB in 0s (40.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzrntnq6_/python3-sphinx_8.2.3-8_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libmount1 amd64 2.41.2-4 [211 kB] Fetched 211 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzhk9w17o/libmount1_2.41.2-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-all amd64 3.13.7-1 [1048 B] Fetched 1048 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoypg5zn2/python3-all_3.13.7-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 tzdata all 2025b-5 [260 kB] Fetched 260 kB in 0s (24.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr1xudfq4/tzdata_2025b-5_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libjs-jquery all 3.7.1+dfsg+~3.5.33-1 [319 kB] Fetched 319 kB in 0s (31.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpa2iepk83/libjs-jquery_3.7.1+dfsg+~3.5.33-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-decorator all 5.2.1-2 [33.0 kB] Fetched 33.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_4mk_qb4/python3-decorator_5.2.1-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 diffutils amd64 1:3.12-1 [405 kB] Fetched 405 kB in 0s (0 B/s) dpkg-name: info: moved 'diffutils_1%3a3.12-1_amd64.deb' to '/srv/rebuilderd/tmp/tmpi8wy_r9q/diffutils_3.12-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libcap-ng0 amd64 0.8.5-4+b1 [17.6 kB] Fetched 17.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsm34bxa8/libcap-ng0_0.8.5-4+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 xz-utils amd64 5.8.1-2 [660 kB] Fetched 660 kB in 0s (58.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp35i1cnej/xz-utils_5.8.1-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libjs-sprintf-js all 1.1.2+ds1+~1.1.2-1 [12.8 kB] Fetched 12.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx29q1pje/libjs-sprintf-js_1.1.2+ds1+~1.1.2-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251021T083202Z sid/main amd64 python3-hypothesis all 6.140.2-1 [364 kB] Fetched 364 kB in 0s (35.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwrjji2g1/python3-hypothesis_6.140.2-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 xfonts-encodings all 1:1.0.4-2.2 [577 kB] Fetched 577 kB in 0s (50.3 MB/s) dpkg-name: info: moved 'xfonts-encodings_1%3a1.0.4-2.2_all.deb' to '/srv/rebuilderd/tmp/tmpjxbxplp9/xfonts-encodings_1.0.4-2.2_all.deb' dpkg-buildpackage: info: source package debootsnap-dummy dpkg-buildpackage: info: source version 1.0 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Equivs Dummy Package Generator dpkg-buildpackage: info: host architecture amd64 dpkg-source --before-build . debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/debootsnap-dummy/ dh_install dh_installdocs dh_installchangelogs dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'debootsnap-dummy' in '../debootsnap-dummy_1.0_all.deb'. dpkg-genbuildinfo --build=binary -O../debootsnap-dummy_1.0_amd64.buildinfo dpkg-genchanges --build=binary -O../debootsnap-dummy_1.0_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) The package has been created. Attention, the package has been created in the /srv/rebuilderd/tmp/tmpp_w7ji0n/cache directory, not in ".." as indicated by the message above! I: automatically chosen mode: unshare I: chroot architecture amd64 is equal to the host's architecture I: using /srv/rebuilderd/tmp/mmdebstrap.38AaWai1qa as tempdir I: running --setup-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/setup00.sh /srv/rebuilderd/tmp/mmdebstrap.38AaWai1qa 127.0.0.1 - - [01/Nov/2025 13:31:06] code 404, message File not found 127.0.0.1 - - [01/Nov/2025 13:31:06] "GET /./InRelease HTTP/1.1" 404 - Ign:1 http://localhost:35755 ./ InRelease 127.0.0.1 - - [01/Nov/2025 13:31:06] "GET /./Release HTTP/1.1" 200 - Get:2 http://localhost:35755 ./ Release [462 B] 127.0.0.1 - - [01/Nov/2025 13:31:06] code 404, message File not found 127.0.0.1 - - [01/Nov/2025 13:31:06] "GET /./Release.gpg HTTP/1.1" 404 - Ign:3 http://localhost:35755 ./ Release.gpg 127.0.0.1 - - [01/Nov/2025 13:31:06] "GET /./Packages HTTP/1.1" 200 - Get:4 http://localhost:35755 ./ Packages [531 kB] Fetched 531 kB in 0s (17.2 MB/s) Reading package lists... usr-is-merged found but not real -- not running merged-usr setup hook I: skipping apt-get update because it was already run I: downloading packages with apt... 127.0.0.1 - - [01/Nov/2025 13:31:06] "GET /./gcc-15-base_15.2.0-5_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Nov/2025 13:31:06] "GET /./libc6_2.41-12_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Nov/2025 13:31:06] "GET /./libgcc-s1_15.2.0-5_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Nov/2025 13:31:06] "GET /./mawk_1.3.4.20250131-1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Nov/2025 13:31:06] "GET /./base-files_14_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Nov/2025 13:31:06] "GET /./libtinfo6_6.5%2b20250216-2_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Nov/2025 13:31:06] "GET /./debianutils_5.23.2_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Nov/2025 13:31:06] "GET /./bash_5.3-1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Nov/2025 13:31:06] "GET /./libacl1_2.3.2-2%2bb1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Nov/2025 13:31:06] "GET /./libattr1_2.5.2-3_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Nov/2025 13:31:06] "GET /./libcap2_2.75-10%2bb1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Nov/2025 13:31:06] "GET /./libgmp10_6.3.0%2bdfsg-5_amd64.deb HTTP/1.1" 200 - 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127.0.0.1 - - [01/Nov/2025 13:31:06] "GET /./libsmartcols1_2.41.2-4_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Nov/2025 13:31:06] "GET /./libudev1_258.1-1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Nov/2025 13:31:06] "GET /./libuuid1_2.41.2-4_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Nov/2025 13:31:06] "GET /./util-linux_2.41.2-4_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Nov/2025 13:31:06] "GET /./libdebconfclient0_0.280_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Nov/2025 13:31:06] "GET /./base-passwd_3.6.7_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Nov/2025 13:31:06] "GET /./init-system-helpers_1.69_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Nov/2025 13:31:06] "GET /./libc-bin_2.41-12_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Nov/2025 13:31:06] "GET /./ncurses-base_6.5%2b20250216-2_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Nov/2025 13:31:06] "GET /./sysvinit-utils_3.14-4_amd64.deb HTTP/1.1" 200 - I: extracting archives... I: running --extract-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/extract00.sh /srv/rebuilderd/tmp/mmdebstrap.38AaWai1qa 127.0.0.1 - - [01/Nov/2025 13:31:08] code 404, message File not found 127.0.0.1 - - [01/Nov/2025 13:31:08] "GET /./InRelease HTTP/1.1" 404 - Ign:1 http://localhost:35755 ./ InRelease 127.0.0.1 - - [01/Nov/2025 13:31:08] "GET /./Release HTTP/1.1" 304 - Hit:2 http://localhost:35755 ./ Release 127.0.0.1 - - [01/Nov/2025 13:31:08] code 404, message File not found 127.0.0.1 - - [01/Nov/2025 13:31:08] "GET /./Release.gpg HTTP/1.1" 404 - Ign:3 http://localhost:35755 ./ Release.gpg Reading package lists... usr-is-merged found but not real -- not running merged-usr extract hook I: installing essential packages... I: running --essential-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/essential00.sh /srv/rebuilderd/tmp/mmdebstrap.38AaWai1qa usr-is-merged was not installed in a previous hook -- not running merged-usr essential hook I: installing remaining packages inside the chroot... 127.0.0.1 - - [01/Nov/2025 13:31:14] "GET /./fonts-lato_2.015-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Nov/2025 13:31:14] "GET /./libexpat1_2.7.3-1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Nov/2025 13:31:14] "GET /./libpython3.13-minimal_3.13.9-1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Nov/2025 13:31:14] "GET /./python3.13-minimal_3.13.9-1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Nov/2025 13:31:14] "GET /./python3-minimal_3.13.7-1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Nov/2025 13:31:14] "GET /./media-types_14.0.0_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Nov/2025 13:31:14] "GET /./netbase_6.5_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [01/Nov/2025 13:31:14] "GET /./tzdata_2025b-5_all.deb HTTP/1.1" 200 - 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Building dependency tree... Reading state information... node-corepack is already the newest version (0.24.0-5). node-corepack set to manually installed. libdpkg-perl is already the newest version (1.22.21). libdpkg-perl set to manually installed. python3-pygments is already the newest version (2.18.0+dfsg-2). python3-pygments set to manually installed. python3-pyparsing is already the newest version (3.1.3-1). python3-pyparsing set to manually installed. base-files is already the newest version (14). node-acorn is already the newest version (8.8.1+ds+~cs25.17.7-2). node-acorn set to manually installed. python3-jaraco.context is already the newest version (6.0.1-1). python3-jaraco.context set to manually installed. node-argparse is already the newest version (2.0.1-2). node-argparse set to manually installed. libjbig0 is already the newest version (2.1-6.1+b2). libjbig0 set to manually installed. node-sprintf-js is already the newest version (1.1.2+ds1+~1.1.2-1). node-sprintf-js set to manually installed. libjs-sphinxdoc is already the newest version (8.2.3-8). libjs-sphinxdoc set to manually installed. python3-netcdf4 is already the newest version (1.7.3-1). python3-netcdf4 set to manually installed. libavif16 is already the newest version (1.3.0-1+b1). libavif16 set to manually installed. python3-rlpycairo is already the newest version (0.3.0-4). python3-rlpycairo set to manually installed. libjs-mathjax is already the newest version (2.7.9+dfsg-1). libjs-mathjax set to manually installed. libseccomp2 is already the newest version (2.6.0-2). libseccomp2 set to manually installed. libstdc++-15-dev is already the newest version (15.2.0-5). libstdc++-15-dev set to manually installed. fonts-lyx is already the newest version (2.4.4-2). fonts-lyx set to manually installed. python3-citeproc is already the newest version (0.9.0-1). python3-citeproc set to manually installed. python3-mmtf is already the newest version (1.1.3-1). python3-mmtf set to manually installed. python3-pybtex is already the newest version (0.25.1-1). python3-pybtex set to manually installed. libaudit-common is already the newest version (1:4.1.2-1). libicu76 is already the newest version (76.1-4). libicu76 set to manually installed. rdkit-doc is already the newest version (202503.6-2). rdkit-doc set to manually installed. python-h5py-doc is already the newest version (3.14.0-3). python-h5py-doc set to manually installed. python3-zopfli is already the newest version (0.2.3.post1-1+b1). python3-zopfli set to manually installed. blt is already the newest version (2.5.3+dfsg-8). blt set to manually installed. bash is already the newest version (5.3-1). python3-defusedxml is already the newest version (0.7.1-3). python3-defusedxml set to manually installed. libmpc3 is already the newest version (1.3.1-2). libmpc3 set to manually installed. grep is already the newest version (3.12-1). libssl3t64 is already the newest version (3.5.4-1). libpipeline1 is already the newest version (1.5.8-1). libpipeline1 set to manually installed. python3-ufolib2 is already the newest version (0.17.1+dfsg1-1). python3-ufolib2 set to manually installed. libblas3 is already the newest version (3.12.1-7). libblas3 set to manually installed. python3-latexcodec is already the newest version (3.0.0-1). python3-latexcodec set to manually installed. python3-fonttools is already the newest version (4.57.0-2). python3-fonttools set to manually installed. python3-sympy is already the newest version (1.14.0-2). python3-sympy set to manually installed. liblzf1 is already the newest version (3.6-4+b3). liblzf1 set to manually installed. python3-pytz is already the newest version (2025.2-4). python3-pytz set to manually installed. python3-tk is already the newest version (3.13.9-1). python3-tk set to manually installed. cython3 is already the newest version (3.0.11+dfsg-2+b1). cython3 set to manually installed. node-semver is already the newest version (7.6.1+~7.5.8-2). node-semver set to manually installed. xfonts-utils 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libxcb1 is already the newest version (1.17.0-2+b1). libxcb1 set to manually installed. liblsan0 is already the newest version (15.2.0-5). liblsan0 set to manually installed. gcc-x86-64-linux-gnu is already the newest version (4:15.2.0-4). gcc-x86-64-linux-gnu set to manually installed. libitm1 is already the newest version (15.2.0-5). libitm1 set to manually installed. libcrypt-dev is already the newest version (1:4.4.38-1). libcrypt-dev set to manually installed. libnghttp2-14 is already the newest version (1.64.0-1.1+b1). libnghttp2-14 set to manually installed. node-debug is already the newest version (4.4.1+~4.1.12-1). node-debug set to manually installed. python3-sklearn-lib is already the newest version (1.7.2+dfsg-3). python3-sklearn-lib set to manually installed. libraqm0 is already the newest version (0.10.3-1). libraqm0 set to manually installed. python3-imagesize is already the newest version (1.4.1-1). python3-imagesize set to manually installed. g++ is already the newest version (4:15.2.0-4). g++ set to manually installed. python3-minimal is already the newest version (3.13.7-1). python3-minimal set to manually installed. python-numpy-doc is already the newest version (1:2.3.3+ds-3). python-numpy-doc set to manually installed. python3-jinja2 is already the newest version (3.1.6-1). python3-jinja2 set to manually installed. libcc1-0 is already the newest version (15.2.0-5). libcc1-0 set to manually installed. patch is already the newest version (2.8-2). patch set to manually installed. python3-h5py is already the newest version (3.14.0-3). python3-h5py set to manually installed. python3-build is already the newest version (1.2.2-4). python3-build set to manually installed. python3-lz4 is already the newest version (4.4.4+dfsg-3). python3-lz4 set to manually installed. libdb5.3t64 is already the newest version (5.3.28+dfsg2-10). libxss1 is already the newest version (1:1.2.3-1+b3). libxss1 set to manually installed. nodejs is already the newest version (20.19.5+dfsg+~cs20.19.12-4). nodejs set to manually installed. dh-autoreconf is already the newest version (21). dh-autoreconf set to manually installed. libdeflate0 is already the newest version (1.23-2). libdeflate0 set to manually installed. autopoint is already the newest version (0.23.1-2). autopoint set to manually installed. python3-mpmath is already the newest version (1.3.0-1). python3-mpmath set to manually installed. python3.13-dev is already the newest version (3.13.9-1). python3.13-dev set to manually installed. cpp-x86-64-linux-gnu is already the newest version (4:15.2.0-4). cpp-x86-64-linux-gnu set to manually installed. hostname is already the newest version (3.25). libsmartcols1 is already the newest version (2.41.2-4). dpkg is already the newest version (1.22.21). python3-sphinxcontrib.jquery is already the newest version (4.1-6). python3-sphinxcontrib.jquery set to manually installed. liblerc4 is already the newest version (4.0.0+ds-5). liblerc4 set to manually installed. libqhull-r8.0 is already the newest version (2020.2-7). libqhull-r8.0 set to manually installed. python3-doc is already the newest version (3.13.7-1). python3-doc set to manually installed. rpcsvc-proto is already the newest version (1.4.3-1). rpcsvc-proto set to manually installed. libkeyutils1 is already the newest version (1.6.3-6). libkeyutils1 set to manually installed. libldap2 is already the newest version (2.6.10+dfsg-1). libldap2 set to manually installed. libarchive-zip-perl is already the newest version (1.68-1). libarchive-zip-perl set to manually installed. python3-roman-numerals is already the newest version (3.1.0-2). python3-roman-numerals set to manually installed. python3-jaraco.functools is already the newest version (4.1.0-1). python3-jaraco.functools set to manually installed. python3-scipy is already the newest version (1.16.2-2). python3-scipy set to manually installed. dwz is already the newest version (0.16-2). dwz set to manually installed. 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(1.21.3-5). libkrb5support0 set to manually installed. sensible-utils is already the newest version (0.0.26). sensible-utils set to manually installed. python3-dev is already the newest version (3.13.7-1). python3-dev set to manually installed. libnghttp3-9 is already the newest version (1.12.0-1). libnghttp3-9 set to manually installed. libselinux1 is already the newest version (3.9-2). python3-cairo is already the newest version (1.27.0-2). python3-cairo set to manually installed. bzip2 is already the newest version (1.0.8-6). bzip2 set to manually installed. libpixman-1-0 is already the newest version (0.46.4-1). libpixman-1-0 set to manually installed. node-xtend is already the newest version (4.0.2-3). node-xtend set to manually installed. libcurl4t64 is already the newest version (8.17.0~rc2-1). libcurl4t64 set to manually installed. media-types is already the newest version (14.0.0). media-types set to manually installed. libctf-nobfd0 is already the newest version (2.45-7). libctf-nobfd0 set to manually installed. libpython3.13-minimal is already the newest version (3.13.9-1). libpython3.13-minimal set to manually installed. python3-sphinxcontrib.applehelp is already the newest version (2.0.0-1). python3-sphinxcontrib.applehelp set to manually installed. autoconf is already the newest version (2.72-3.1). autoconf set to manually installed. tar is already the newest version (1.35+dfsg-3.1). python3-networkx is already the newest version (3.4.2-2). python3-networkx set to manually installed. libpython3.13-dev is already the newest version (3.13.9-1). libpython3.13-dev set to manually installed. libmpfr6 is already the newest version (4.2.2-2). libmpfr6 set to manually installed. sphinx-rtd-theme-common is already the newest version (3.0.2+dfsg-3). sphinx-rtd-theme-common set to manually installed. gcc is already the newest version (4:15.2.0-4). gcc set to manually installed. python3-freetype is already the newest version (2.5.1-2). python3-freetype set to manually installed. libgdbm-compat4t64 is already the newest version (1.26-1). libgdbm-compat4t64 set to manually installed. python3-contourpy is already the newest version (1.3.1-2). python3-contourpy set to manually installed. python3-installer is already the newest version (0.7.0+dfsg1-3). python3-installer set to manually installed. cpp-15 is already the newest version (15.2.0-5). cpp-15 set to manually installed. libelf1t64 is already the newest version (0.193-3). libelf1t64 set to manually installed. libcap2 is already the newest version (1:2.75-10+b1). dash is already the newest version (0.5.12-12). libzopfli1 is already the newest version (1.0.3-3). libzopfli1 set to manually installed. libpython3-all-dev is already the newest version (3.13.7-1). libpython3-all-dev set to manually installed. libgnutls30t64 is already the newest version (3.8.10-2). libgnutls30t64 set to manually installed. libpng16-16t64 is already the newest version (1.6.50-1). libpng16-16t64 set to manually installed. libcurl3t64-gnutls is already the newest version (8.17.0~rc2-1). libcurl3t64-gnutls set to manually installed. libdav1d7 is already the newest version (1.5.1-1). libdav1d7 set to manually installed. sphinx-common is already the newest version (8.2.3-8). sphinx-common set to manually installed. python3-setuptools is already the newest version (78.1.1-0.1). python3-setuptools set to manually installed. xml-core is already the newest version (0.19). xml-core set to manually installed. libproc2-0 is already the newest version (2:4.0.4-9). libproc2-0 set to manually installed. python3-cycler is already the newest version (0.12.1-2). python3-cycler set to manually installed. findutils is already the newest version (4.10.0-3). node-ms is already the newest version (2.1.3+~cs0.7.31-3). node-ms set to manually installed. groff-base is already the newest version (1.23.0-9). groff-base set to manually installed. python3-pil.imagetk is already the newest version (11.3.0-1). python3-pil.imagetk set to manually installed. python3-docutils is already the newest version (0.22.2+dfsg-2). python3-docutils set to manually installed. libgmp10 is already the newest version (2:6.3.0+dfsg-5). liblapack3 is already the newest version (3.12.1-7). liblapack3 set to manually installed. python3.13 is already the newest version (3.13.9-1). python3.13 set to manually installed. python3-packaging is already the newest version (25.0-1). python3-packaging set to manually installed. fonts-mathjax is already the newest version (2.7.9+dfsg-1). fonts-mathjax set to manually installed. readline-common is already the newest version (8.3-3). readline-common set to manually installed. libpython3.13-stdlib is already the newest version (3.13.9-1). libpython3.13-stdlib set to manually installed. libtiff6 is already the newest version (4.7.1-1). libtiff6 set to manually installed. base-passwd is already the newest version (3.6.7). libcairo2 is already the newest version (1.18.4-1+b1). libcairo2 set to manually installed. python3-msmb-theme is already the newest version (1.2.0-4). python3-msmb-theme set to manually installed. python3-reportlab is already the newest version (4.4.4-2). python3-reportlab set to manually installed. libllhttp9.3 is already the newest version (9.3.3~really9.3.0+~cs12.11.8-3). libllhttp9.3 set to manually installed. python3-sphinxcontrib.htmlhelp is already the newest version (2.1.0-1). python3-sphinxcontrib.htmlhelp set to manually installed. python3.13-doc is already the newest version (3.13.9-1). python3.13-doc set to manually installed. libatomic1 is already the newest version (15.2.0-5). libatomic1 set to manually installed. fonts-dejavu-mono is already the newest version (2.37-8). fonts-dejavu-mono set to manually installed. libjpeg62-turbo is already the newest version (1:2.1.5-4). libjpeg62-turbo set to manually installed. libgdbm6t64 is already the newest version (1.26-1). libgdbm6t64 set to manually installed. libblkid1 is already the newest version (2.41.2-4). libisl23 is already the newest version (0.27-1). libisl23 set to manually installed. coreutils is already the newest version (9.7-3). libcom-err2 is already the newest version (1.47.2-3+b3). libcom-err2 set to manually installed. python3-numpy is already the newest version (1:2.3.3+ds-3). python3-numpy set to manually installed. libbrotli1 is already the newest version (1.1.0-2+b7). libbrotli1 set to manually installed. make is already the newest version (4.4.1-2). make set to manually installed. perl is already the newest version (5.40.1-6). perl set to manually installed. libwebp7 is already the newest version (1.5.0-0.1). libwebp7 set to manually installed. libpam-modules-bin is already the newest version (1.7.0-5). libxcb-render0 is already the newest version (1.17.0-2+b1). libxcb-render0 set to manually installed. python-scipy-doc is already the newest version (1.16.2-2). python-scipy-doc set to manually installed. libidn2-0 is already the newest version (2.3.8-4). libidn2-0 set to manually installed. libtcl8.6 is already the newest version (8.6.17+dfsg-1). libtcl8.6 set to manually installed. g++-15 is already the newest version (15.2.0-5). g++-15 set to manually installed. fonts-open-sans is already the newest version (1.11-2). fonts-open-sans set to manually installed. libaom3 is already the newest version (3.13.1-1). libaom3 set to manually installed. libx11-6 is already the newest version (2:1.8.12-1). libx11-6 set to manually installed. libgprofng0 is already the newest version (2.45-7). libgprofng0 set to manually installed. libgomp1 is already the newest version (15.2.0-5). libgomp1 set to manually installed. python3-inflect is already the newest version (7.5.0-1). python3-inflect set to manually installed. libxft2 is already the newest version (2.3.6-1+b4). libxft2 set to manually installed. python3-certifi is already the newest version (2025.1.31+ds-1). python3-certifi set to manually installed. python3.13-tk is already the newest version (3.13.9-1). python3.13-tk set to manually installed. libsz2 is already the newest version (1.1.4-2). libsz2 set to manually installed. node-undici is already the newest version (7.16.0+dfsg+~cs3.2.0-2). node-undici set to manually installed. gzip is already the newest version (1.13-1). libexpat1-dev is already the newest version (2.7.3-1). libexpat1-dev set to manually installed. ncurses-bin is already the newest version (6.5+20250216-2). libgpg-error0 is already the newest version (1.56-2). libgpg-error0 set to manually installed. libsqlite3-0 is already the newest version (3.46.1-8). libsqlite3-0 set to manually installed. libwebpdemux2 is already the newest version (1.5.0-0.1). libwebpdemux2 set to manually installed. libxml2-16 is already the newest version (2.14.6+dfsg-0.1). libxml2-16 set to manually installed. libgav1-1 is already the newest version (0.19.0-3+b1). libgav1-1 set to manually installed. libgcc-s1 is already the newest version (15.2.0-5). node-llhttp is already the newest version (9.3.3~really9.3.0+~cs12.11.8-3). node-llhttp set to manually installed. libreadline8t64 is already the newest version (8.3-3). libreadline8t64 set to manually installed. libmd0 is already the newest version (1.1.0-2+b1). python3-snowballstemmer is already the newest version (3.0.1-1). python3-snowballstemmer set to manually installed. python3-babel is already the newest version (2.17.0-1). python3-babel set to manually installed. libtk8.6 is already the newest version (8.6.17-1). libtk8.6 set to manually installed. libopenjp2-7 is already the newest version (2.5.3-2.1). libopenjp2-7 set to manually installed. python3-sphinxcontrib.serializinghtml is already the newest version (2.0.0-1). python3-sphinxcontrib.serializinghtml set to manually installed. python3-threadpoolctl is already the newest version (3.1.0-1). python3-threadpoolctl set to manually installed. w3c-sgml-lib is already the newest version (1.3-3). w3c-sgml-lib set to manually installed. python3-duecredit is already the newest version (0.10.2-2). python3-duecredit set to manually installed. libc-dev-bin is already the newest version (2.41-12). libc-dev-bin set to manually installed. python3-platformdirs is already the newest version (4.4.0-1). python3-platformdirs set to manually installed. debianutils is already the newest version (5.23.2). libsasl2-modules-db is already the newest version (2.1.28+dfsg1-10). libsasl2-modules-db set to manually installed. python3-pandas is already the newest version (2.3.3+dfsg-1). python3-pandas set to manually installed. python3-pytest is already the newest version (8.4.2-1). python3-pytest set to manually installed. python3-brotli is already the newest version (1.1.0-2+b7). python3-brotli set to manually installed. m4 is already the newest version (1.4.20-2). m4 set to manually installed. liblcms2-2 is already the newest version (2.16-2). liblcms2-2 set to manually installed. libharfbuzz0b is already the newest version (12.1.0-1). libharfbuzz0b set to manually installed. libnettle8t64 is already the newest version (3.10.2-1). libnettle8t64 set to manually installed. python3-tqdm is already the newest version (4.67.1-6). python3-tqdm set to manually installed. init-system-helpers is already the newest version (1.69). libtsan2 is already the newest version (15.2.0-5). libtsan2 set to manually installed. libngtcp2-crypto-ossl0 is already the newest version (1.16.0-1). libngtcp2-crypto-ossl0 set to manually installed. python3-mrcfile is already the newest version (1.5.4-2). python3-mrcfile set to manually installed. python3-sphinx-rtd-theme is already the newest version (3.0.2+dfsg-3). python3-sphinx-rtd-theme set to manually installed. libc6 is already the newest version (2.41-12). libasan8 is already the newest version (15.2.0-5). libasan8 set to manually installed. libc6-dev is already the newest version (2.41-12). libc6-dev set to manually installed. libncursesw6 is already the newest version (6.5+20250216-2). libncursesw6 set to manually installed. procps is already the newest version (2:4.0.4-9). procps set to manually installed. librav1e0.8 is already the newest version (0.8.1-5). librav1e0.8 set to manually installed. python3-fs is already the newest version (2.4.16-8). python3-fs set to manually installed. libattr1 is already the newest version (1:2.5.2-3). libxdmcp6 is already the newest version (1:1.1.5-1). libxdmcp6 set to manually installed. perl-base is already the newest version (5.40.1-6). sed is already the newest version (4.9-2). tk8.6-blt2.5 is already the newest version (2.5.3+dfsg-8). tk8.6-blt2.5 set to manually installed. libglib2.0-0t64 is already the newest version (2.86.1-1). libglib2.0-0t64 set to manually installed. libpsl5t64 is already the newest version (0.21.2-1.1+b1). libpsl5t64 set to manually installed. pybuild-plugin-pyproject is already the newest version (6.20250414). pybuild-plugin-pyproject set to manually installed. libfile-stripnondeterminism-perl is already the newest version (1.15.0-1). libfile-stripnondeterminism-perl set to manually installed. libquadmath0 is already the newest version (15.2.0-5). libquadmath0 set to manually installed. libpython3-dev is already the newest version (3.13.7-1). libpython3-dev set to manually installed. python3-chardet is already the newest version (5.2.0+dfsg-2). python3-chardet set to manually installed. libjson-perl is already the newest version (4.10000-1). libjson-perl set to manually installed. python3-jaraco.text is already the newest version (4.0.0-1). python3-jaraco.text set to manually installed. python3-requests is already the newest version (2.32.5+dfsg-1). python3-requests set to manually installed. python3-pybtex-docutils is already the newest version (1.0.3-1). python3-pybtex-docutils set to manually installed. gcc-15 is already the newest version (15.2.0-5). gcc-15 set to manually installed. python3-h5py-serial is already the newest version (3.14.0-3). python3-h5py-serial set to manually installed. libsasl2-2 is already the newest version (2.1.28+dfsg1-10). libsasl2-2 set to manually installed. python3-wheel is already the newest version (0.46.1-2). python3-wheel set to manually installed. dh-python is already the newest version (6.20250414). dh-python set to manually installed. gcc-15-x86-64-linux-gnu is already the newest version (15.2.0-5). gcc-15-x86-64-linux-gnu set to manually installed. python3-biopython is already the newest version (1.85+dfsg-5). python3-biopython set to manually installed. node-js-yaml is already the newest version (4.1.0+dfsg+~4.0.5-7). node-js-yaml set to manually installed. python-matplotlib-data is already the newest version (3.10.1+dfsg1-6). python-matplotlib-data set to manually installed. python3-alabaster is already the newest version (0.7.16-0.1). python3-alabaster set to manually installed. libgcrypt20 is already the newest version (1.11.2-2). libgcrypt20 set to manually installed. binutils-common is already the newest version (2.45-7). binutils-common set to manually installed. libaec0 is already the newest version (1.1.4-2). libaec0 set to manually installed. python3-attr is already the newest version (25.4.0-1). python3-attr set to manually installed. python3-pkg-resources is already the newest version (78.1.1-0.1). python3-pkg-resources set to manually installed. gettext-base is already the newest version (0.23.1-2+b1). gettext-base set to manually installed. netbase is already the newest version (6.5). netbase set to manually installed. g++-x86-64-linux-gnu is already the newest version (4:15.2.0-4). g++-x86-64-linux-gnu set to manually installed. libpam-modules is already the newest version (1.7.0-5). python3-looseversion is already the newest version (1.3.0-3). python3-looseversion set to manually installed. python3-matplotlib is already the newest version (3.10.1+dfsg1-6). python3-matplotlib set to manually installed. python-gsd-doc is already the newest version (4.0.0-1). python-gsd-doc set to manually installed. fonts-dejavu-core is already the newest version (2.37-8). fonts-dejavu-core set to manually installed. node-balanced-match is already the newest version (2.0.0-1). node-balanced-match set to manually installed. debconf is already the newest version (1.5.91). libjs-underscore is already the newest version (1.13.4~dfsg+~1.11.4-3). libjs-underscore set to manually installed. python3-cftime is already the newest version (1.6.5-1). python3-cftime set to manually installed. libunistring5 is already the newest version (1.3-2). libunistring5 set to manually installed. libubsan1 is already the newest version (15.2.0-5). libubsan1 set to manually installed. libuchardet0 is already the newest version (0.0.8-2). libuchardet0 set to manually installed. python3-fasteners is already the newest version (0.19-2). python3-fasteners set to manually installed. libjansson4 is already the newest version (2.14-2+b3). libjansson4 set to manually installed. openssl is already the newest version (3.5.4-1). openssl set to manually installed. automake is already the newest version (1:1.18.1-2). automake set to manually installed. binutils-x86-64-linux-gnu is already the newest version (2.45-7). binutils-x86-64-linux-gnu set to manually installed. dh-strip-nondeterminism is already the newest version (1.15.0-1). dh-strip-nondeterminism set to manually installed. libctf0 is already the newest version (2.45-7). libctf0 set to manually installed. python3-iniconfig is already the newest version (1.1.1-2). python3-iniconfig set to manually installed. x11-common is already the newest version (1:7.7+26). x11-common set to manually installed. linux-libc-dev is already the newest version (6.16.12-2). linux-libc-dev set to manually installed. python3-urllib3 is already the newest version (2.5.0-1). python3-urllib3 set to manually installed. node-esprima is already the newest version (4.0.1+ds+~4.0.3-2). node-esprima set to manually installed. libgfortran5 is already the newest version (15.2.0-5). libgfortran5 set to manually installed. libx11-data is already the newest version (2:1.8.12-1). libx11-data set to manually installed. python3-sortedcontainers is already the newest version (2.4.0-2). python3-sortedcontainers set to manually installed. libgssapi-krb5-2 is already the newest version (1.21.3-5). libgssapi-krb5-2 set to manually installed. python3-charset-normalizer is already the newest version (3.4.3-1). python3-charset-normalizer set to manually installed. python3-yaml is already the newest version (6.0.2-2). python3-yaml set to manually installed. util-linux is already the newest version (2.41.2-4). python3-mda-xdrlib is already the newest version (0.2.0-3). python3-mda-xdrlib set to manually installed. zlib1g is already the newest version (1:1.3.dfsg+really1.3.1-1+b1). libsharpyuv0 is already the newest version (1.5.0-0.1). libsharpyuv0 set to manually installed. libabsl20240722 is already the newest version (20240722.0-4). libabsl20240722 set to manually installed. libpam-runtime is already the newest version (1.7.0-5). python3-msgpack is already the newest version (1.0.3-3+b4). python3-msgpack set to manually installed. python3.13-minimal is already the newest version (3.13.9-1). python3.13-minimal set to manually installed. libpython3.13 is already the newest version (3.13.9-1). libpython3.13 set to manually installed. libgraphite2-3 is already the newest version (1.3.14-11). libgraphite2-3 set to manually installed. libudev1 is already the newest version (258.1-1). python3-more-itertools is already the newest version (10.8.0-1). python3-more-itertools set to manually installed. libp11-kit0 is already the newest version (0.25.9-2). libp11-kit0 set to manually installed. python3-gsd is already the newest version (4.0.0-1). python3-gsd set to manually installed. python3-pyproject-hooks is already the newest version (1.2.0-1). python3-pyproject-hooks set to manually installed. libsystemd0 is already the newest version (258.1-1). libyaml-0-2 is already the newest version (0.2.5-2). libyaml-0-2 set to manually installed. python3-monotonic is already the newest version (1.6-3). python3-monotonic set to manually installed. libkrb5-3 is already the newest version (1.21.3-5). libkrb5-3 set to manually installed. librtmp1 is already the newest version (2.4+20151223.gitfa8646d.1-3). librtmp1 set to manually installed. libhwasan0 is already the newest version (15.2.0-5). libhwasan0 set to manually installed. python3-idna is already the newest version (3.10-1). python3-idna set to manually installed. python3-joblib is already the newest version (1.4.2-5). python3-joblib set to manually installed. liblz4-1 is already the newest version (1.10.0-4). liblz4-1 set to manually installed. gettext is already the newest version (0.23.1-2+b1). gettext set to manually installed. python-matplotlib-doc is already the newest version (3.10.1+dfsg1-6). python-matplotlib-doc set to manually installed. python3-sphinx-sitemap is already the newest version (2.6.0-1). python3-sphinx-sitemap set to manually installed. python3-dateutil is already the newest version (2.9.0-4). python3-dateutil set to manually installed. libbinutils is already the newest version (2.45-7). libbinutils set to manually installed. libfontconfig1 is already the newest version (2.15.0-2.4). libfontconfig1 set to manually installed. libpcre2-8-0 is already the newest version (10.46-1). python3-pluggy is already the newest version (1.6.0-1). python3-pluggy set to manually installed. zlib1g-dev is already the newest version (1:1.3.dfsg+really1.3.1-1+b1). zlib1g-dev set to manually installed. libfontenc1 is already the newest version (1:1.1.8-1+b2). libfontenc1 set to manually installed. python3-seaborn is already the newest version (0.13.2-5). python3-seaborn set to manually installed. libxext6 is already the newest version (2:1.3.4-1+b3). libxext6 set to manually installed. python3-sphinxcontrib.qthelp is already the newest version (2.0.0-1). python3-sphinxcontrib.qthelp set to manually installed. autotools-dev is already the newest version (20240727.1). autotools-dev set to manually installed. gcc-15-base is already the newest version (15.2.0-5). python-dask-doc is already the newest version (2024.12.1+dfsg-2). python-dask-doc set to manually installed. libexpat1 is already the newest version (2.7.3-1). libexpat1 set to manually installed. libngtcp2-16 is already the newest version (1.16.0-1). libngtcp2-16 set to manually installed. libcares2 is already the newest version (1.34.5-1). libcares2 set to manually installed. python3-kiwisolver is already the newest version (1.4.10~rc0-1). python3-kiwisolver set to manually installed. libfribidi0 is already the newest version (1.0.16-3). libfribidi0 set to manually installed. mawk is already the newest version (1.3.4.20250131-1). python3-sklearn is already the newest version (1.7.2+dfsg-3). python3-sklearn set to manually installed. libc-bin is already the newest version (2.41-12). perl-modules-5.40 is already the newest version (5.40.1-6). perl-modules-5.40 set to manually installed. binutils is already the newest version (2.45-7). binutils set to manually installed. python3-pil is already the newest version (11.3.0-1). python3-pil set to manually installed. python3-sphinxcontrib.devhelp is already the newest version (2.0.0-1). python3-sphinxcontrib.devhelp set to manually installed. libacl1 is already the newest version (2.3.2-2+b1). ncurses-base is already the newest version (6.5+20250216-2). libaudit1 is already the newest version (1:4.1.2-1). libzstd1 is already the newest version (1.5.7+dfsg-2). libsframe2 is already the newest version (2.45-7). libsframe2 set to manually installed. intltool-debian is already the newest version (0.35.0+20060710.6). intltool-debian set to manually installed. dpkg-dev is already the newest version (1.22.21). dpkg-dev set to manually installed. docutils-common is already the newest version (0.22.2+dfsg-2). docutils-common set to manually installed. libdebhelper-perl is already the newest version (13.28). libdebhelper-perl set to manually installed. python3-filelock is already the newest version (3.20.0-1). python3-filelock set to manually installed. fonts-lato is already the newest version (2.015-1). fonts-lato set to manually installed. bsdextrautils is already the newest version (2.41.2-4). bsdextrautils set to manually installed. build-essential is already the newest version (12.12). build-essential set to manually installed. python3-all-dev is already the newest version (3.13.7-1). python3-all-dev set to manually installed. openssl-provider-legacy is already the newest version (3.5.4-1). python3-sphinxcontrib.bibtex is already the newest version (2.6.5-3). python3-sphinxcontrib.bibtex set to manually installed. libpam0g is already the newest version (1.7.0-5). python3 is already the newest version (3.13.7-1). python3 set to manually installed. python3-numpy-dev is already the newest version (1:2.3.3+ds-3). python3-numpy-dev set to manually installed. man-db is already the newest version (2.13.1-1). man-db set to manually installed. python3-markupsafe is already the newest version (3.0.3-1). python3-markupsafe set to manually installed. po-debconf is already the newest version (1.0.21+nmu1). po-debconf set to manually installed. python3-zipp is already the newest version (3.23.0-1). python3-zipp set to manually installed. libyuv0 is already the newest version (0.0.1919.20250919-1). libyuv0 set to manually installed. liblzma5 is already the newest version (5.8.1-2). libwebpmux3 is already the newest version (1.5.0-0.1). libwebpmux3 set to manually installed. libhdf5-hl-310 is already the newest version (1.14.5+repack-4). libhdf5-hl-310 set to manually installed. libgcc-15-dev is already the newest version (15.2.0-5). libgcc-15-dev set to manually installed. node-lru-cache is already the newest version (10.0.1-3). node-lru-cache set to manually installed. python3-griddataformats is already the newest version (1.0.2-2). python3-griddataformats set to manually installed. libxau6 is already the newest version (1:1.0.11-1). libxau6 set to manually installed. unicode-data is already the newest version (16.0.0-1). unicode-data set to manually installed. cpp is already the newest version (4:15.2.0-4). cpp set to manually installed. python3-pandas-lib is already the newest version (2.3.3+dfsg-1). python3-pandas-lib set to manually installed. libnetcdf22 is already the newest version (1:4.9.3-1+b1). libnetcdf22 set to manually installed. fonts-font-awesome is already the newest version (5.0.10+really4.7.0~dfsg-4.1). fonts-font-awesome set to manually installed. ca-certificates is already the newest version (20250419). ca-certificates set to manually installed. python3-typing-extensions is already the newest version (4.15.0-1). python3-typing-extensions set to manually installed. libhogweed6t64 is already the newest version (3.10.2-1). libhogweed6t64 set to manually installed. sysvinit-utils is already the newest version (3.14-4). libhdf5-310 is already the newest version (1.14.5+repack-4). libhdf5-310 set to manually installed. libxcb-shm0 is already the newest version (1.17.0-2+b1). libxcb-shm0 set to manually installed. file is already the newest version (1:5.46-5). file set to manually installed. libtool is already the newest version (2.5.4-7). libtool set to manually installed. libsvtav1enc2 is already the newest version (2.3.0+dfsg-1). libsvtav1enc2 set to manually installed. libmagic-mgc is already the newest version (1:5.46-5). libmagic-mgc set to manually installed. fontconfig-config is already the newest version (2.15.0-2.4). fontconfig-config set to manually installed. libdebconfclient0 is already the newest version (0.280). libnode115 is already the newest version (20.19.5+dfsg+~cs20.19.12-4). libnode115 set to manually installed. libbz2-1.0 is already the newest version (1.0.8-6). python3-sphinx is already the newest version (8.2.3-8). python3-sphinx set to manually installed. libmount1 is already the newest version (2.41.2-4). python3-all is already the newest version (3.13.7-1). python3-all set to manually installed. tzdata is already the newest version (2025b-5). tzdata set to manually installed. libjs-jquery is already the newest version (3.7.1+dfsg+~3.5.33-1). libjs-jquery set to manually installed. python3-decorator is already the newest version (5.2.1-2). python3-decorator set to manually installed. diffutils is already the newest version (1:3.12-1). libcap-ng0 is already the newest version (0.8.5-4+b1). xz-utils is already the newest version (5.8.1-2). xz-utils set to manually installed. libjs-sprintf-js is already the newest version (1.1.2+ds1+~1.1.2-1). libjs-sprintf-js set to manually installed. python3-hypothesis is already the newest version (6.140.2-1). python3-hypothesis set to manually installed. xfonts-encodings is already the newest version (1:1.0.4-2.2). xfonts-encodings set to manually installed. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: running --customize-hook in shell: sh -c 'chroot "$1" dpkg -r debootsnap-dummy' exec /srv/rebuilderd/tmp/mmdebstrap.38AaWai1qa (Reading database ... 77033 files and directories currently installed.) Removing debootsnap-dummy (1.0) ... I: running --customize-hook in shell: sh -c 'chroot "$1" dpkg-query --showformat '${binary:Package}=${Version}\n' --show > "$1/pkglist"' exec /srv/rebuilderd/tmp/mmdebstrap.38AaWai1qa I: running special hook: download /pkglist ./pkglist I: running --customize-hook in shell: sh -c 'rm "$1/pkglist"' exec /srv/rebuilderd/tmp/mmdebstrap.38AaWai1qa I: running special hook: upload sources.list /etc/apt/sources.list I: waiting for background processes to finish... I: cleaning package lists and apt cache... I: skipping cleanup/reproducible as requested I: creating tarball... I: done I: removing tempdir /srv/rebuilderd/tmp/mmdebstrap.38AaWai1qa... I: success in 202.9677 seconds Downloading dependency 383 of 429: python3-sphinxcontrib.bibtex:amd64=2.6.5-3 Downloading dependency 384 of 429: libpam0g:amd64=1.7.0-5 Downloading dependency 385 of 429: python3:amd64=3.13.7-1 Downloading dependency 386 of 429: python3-numpy-dev:amd64=1:2.3.3+ds-3 Downloading dependency 387 of 429: man-db:amd64=2.13.1-1 Downloading dependency 388 of 429: python3-markupsafe:amd64=3.0.3-1 Downloading dependency 389 of 429: po-debconf:amd64=1.0.21+nmu1 Downloading dependency 390 of 429: python3-zipp:amd64=3.23.0-1 Downloading dependency 391 of 429: libyuv0:amd64=0.0.1919.20250919-1 Downloading dependency 392 of 429: liblzma5:amd64=5.8.1-2 Downloading dependency 393 of 429: libwebpmux3:amd64=1.5.0-0.1 Downloading dependency 394 of 429: libhdf5-hl-310:amd64=1.14.5+repack-4 Downloading dependency 395 of 429: libgcc-15-dev:amd64=15.2.0-5 Downloading dependency 396 of 429: node-lru-cache:amd64=10.0.1-3 Downloading dependency 397 of 429: python3-griddataformats:amd64=1.0.2-2 Downloading dependency 398 of 429: libxau6:amd64=1:1.0.11-1 Downloading dependency 399 of 429: unicode-data:amd64=16.0.0-1 Downloading dependency 400 of 429: cpp:amd64=4:15.2.0-4 Downloading dependency 401 of 429: python3-pandas-lib:amd64=2.3.3+dfsg-1 Downloading dependency 402 of 429: libnetcdf22:amd64=1:4.9.3-1+b1 Downloading dependency 403 of 429: fonts-font-awesome:amd64=5.0.10+really4.7.0~dfsg-4.1 Downloading dependency 404 of 429: ca-certificates:amd64=20250419 Downloading dependency 405 of 429: python3-typing-extensions:amd64=4.15.0-1 Downloading dependency 406 of 429: libhogweed6t64:amd64=3.10.2-1 Downloading dependency 407 of 429: sysvinit-utils:amd64=3.14-4 Downloading dependency 408 of 429: libhdf5-310:amd64=1.14.5+repack-4 Downloading dependency 409 of 429: libxcb-shm0:amd64=1.17.0-2+b1 Downloading dependency 410 of 429: file:amd64=1:5.46-5 Downloading dependency 411 of 429: libtool:amd64=2.5.4-7 Downloading dependency 412 of 429: libsvtav1enc2:amd64=2.3.0+dfsg-1 Downloading dependency 413 of 429: libmagic-mgc:amd64=1:5.46-5 Downloading dependency 414 of 429: fontconfig-config:amd64=2.15.0-2.4 Downloading dependency 415 of 429: libdebconfclient0:amd64=0.280 Downloading dependency 416 of 429: libnode115:amd64=20.19.5+dfsg+~cs20.19.12-4 Downloading dependency 417 of 429: libbz2-1.0:amd64=1.0.8-6 Downloading dependency 418 of 429: python3-sphinx:amd64=8.2.3-8 Downloading dependency 419 of 429: libmount1:amd64=2.41.2-4 Downloading dependency 420 of 429: python3-all:amd64=3.13.7-1 Downloading dependency 421 of 429: tzdata:amd64=2025b-5 Downloading dependency 422 of 429: libjs-jquery:amd64=3.7.1+dfsg+~3.5.33-1 Downloading dependency 423 of 429: python3-decorator:amd64=5.2.1-2 Downloading dependency 424 of 429: diffutils:amd64=1:3.12-1 Downloading dependency 425 of 429: libcap-ng0:amd64=0.8.5-4+b1 Downloading dependency 426 of 429: xz-utils:amd64=5.8.1-2 Downloading dependency 427 of 429: libjs-sprintf-js:amd64=1.1.2+ds1+~1.1.2-1 Downloading dependency 428 of 429: python3-hypothesis:amd64=6.140.2-1 Downloading dependency 429 of 429: xfonts-encodings:amd64=1:1.0.4-2.2 env --chdir=/srv/rebuilderd/tmp/rebuilderdnQaZYI/out DEB_BUILD_OPTIONS=parallel=6 LANG=C.UTF-8 LC_COLLATE=C.UTF-8 LC_CTYPE=C.UTF-8 SOURCE_DATE_EPOCH=1761087011 SBUILD_CONFIG=/srv/rebuilderd/tmp/debrebuild_RjVY5/debrebuild.sbuildrc.LGpJ6kqcmGce sbuild --build=amd64 --host=amd64 --no-source --no-arch-any --arch-all --chroot=/srv/rebuilderd/tmp/debrebuild_RjVY5/debrebuild.tar.yXBsd0IUA0kr --chroot-mode=unshare --dist=unstable --no-run-lintian --no-run-piuparts --no-run-autopkgtest --no-apt-update --no-apt-upgrade --no-apt-distupgrade --verbose --nolog --bd-uninstallable-explainer= --build-path=/build/reproducible-path --dsc-dir=mdanalysis-2.10.0 /srv/rebuilderd/tmp/rebuilderdnQaZYI/inputs/mdanalysis_2.10.0-1.dsc I: consider moving your ~/.sbuildrc to /srv/rebuilderd/.config/sbuild/config.pl The Debian buildds switched to the "unshare" backend and sbuild will default to it in the future. To start using "unshare" add this to your `~/.config/sbuild/config.pl`: $chroot_mode = "unshare"; If you want to keep the old "schroot" mode even in the future, add the following to your `~/.config/sbuild/config.pl`: $chroot_mode = "schroot"; $schroot = "schroot"; sbuild (Debian sbuild) 0.89.3+deb13u1 (16 August 2025) on ionos25-amd64.debian.net +==============================================================================+ | mdanalysis 2.10.0-1 (amd64) Sat, 01 Nov 2025 13:34:30 +0000 | +==============================================================================+ Package: mdanalysis Version: 2.10.0-1 Source Version: 2.10.0-1 Distribution: unstable Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 Build Type: all I: No tarballs found in /srv/rebuilderd/.cache/sbuild I: Unpacking /srv/rebuilderd/tmp/debrebuild_RjVY5/debrebuild.tar.yXBsd0IUA0kr to /srv/rebuilderd/tmp/tmp.sbuild.VMNQGvyoJy... I: Setting up the chroot... I: Creating chroot session... I: Setting up log color... I: Setting up apt archive... +------------------------------------------------------------------------------+ | Fetch source files Sat, 01 Nov 2025 13:34:41 +0000 | +------------------------------------------------------------------------------+ Local sources ------------- /srv/rebuilderd/tmp/rebuilderdnQaZYI/inputs/mdanalysis_2.10.0-1.dsc exists in /srv/rebuilderd/tmp/rebuilderdnQaZYI/inputs; copying to chroot +------------------------------------------------------------------------------+ | Install package build dependencies Sat, 01 Nov 2025 13:34:43 +0000 | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), cython3, dh-sequence-python3, pybuild-plugin-pyproject, python3-all-dev, python3-setuptools, python3-numpy, python3-numpy-dev, python3-biopython (>= 1.80), python3-networkx, python3-griddataformats, python3-mmtf, python3-joblib, python3-scipy, python3-matplotlib, python3-mda-xdrlib, python3-tqdm, python3-threadpoolctl, python3-packaging, python3-filelock, python3-fasteners, python3-gsd (>= 3.0.1~), python3-netcdf4, python3-h5py, python3-seaborn, python3-sklearn, python3-duecredit, python3-hypothesis, python3-pytest, python3-sphinx, build-essential, python3-msmb-theme, python3-pybtex, python3-sphinx-rtd-theme, python3-sphinx-sitemap, python3-sphinxcontrib.applehelp, python3-sphinxcontrib.bibtex, python3-sphinxcontrib.devhelp, python3-sphinxcontrib.htmlhelp, python3-sphinxcontrib.qthelp, python3-sphinxcontrib.serializinghtml, python3-doc, python-gsd-doc, python-h5py-doc, python-matplotlib-doc, python-numpy-doc, python-dask-doc, python-scipy-doc, libjs-mathjax, rdkit-doc Filtered Build-Depends: debhelper-compat (= 13), cython3, dh-sequence-python3, pybuild-plugin-pyproject, python3-all-dev, python3-setuptools, python3-numpy, python3-numpy-dev, python3-biopython (>= 1.80), python3-networkx, python3-griddataformats, python3-mmtf, python3-joblib, python3-scipy, python3-matplotlib, python3-mda-xdrlib, python3-tqdm, python3-threadpoolctl, python3-packaging, python3-filelock, python3-fasteners, python3-gsd (>= 3.0.1~), python3-netcdf4, python3-h5py, python3-seaborn, python3-sklearn, python3-duecredit, python3-hypothesis, python3-pytest, python3-sphinx, build-essential, python3-msmb-theme, python3-pybtex, python3-sphinx-rtd-theme, python3-sphinx-sitemap, python3-sphinxcontrib.applehelp, python3-sphinxcontrib.bibtex, python3-sphinxcontrib.devhelp, python3-sphinxcontrib.htmlhelp, python3-sphinxcontrib.qthelp, python3-sphinxcontrib.serializinghtml, python3-doc, python-gsd-doc, python-h5py-doc, python-matplotlib-doc, python-numpy-doc, python-dask-doc, python-scipy-doc, libjs-mathjax, rdkit-doc dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/build/reproducible-path/resolver-aAjbzz/apt_archive/sbuild-build-depends-main-dummy.deb'. Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies +------------------------------------------------------------------------------+ | Check architectures Sat, 01 Nov 2025 13:34:47 +0000 | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in any all) +------------------------------------------------------------------------------+ | Build environment Sat, 01 Nov 2025 13:34:47 +0000 | +------------------------------------------------------------------------------+ Kernel: Linux 6.12.48+deb13-cloud-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.48-1 (2025-09-20) amd64 (x86_64) Toolchain package versions: binutils_2.45-7 dpkg-dev_1.22.21 g++-15_15.2.0-5 gcc-15_15.2.0-5 libc6-dev_2.41-12 libstdc++-15-dev_15.2.0-5 libstdc++6_15.2.0-5 linux-libc-dev_6.16.12-2 Package versions: autoconf_2.72-3.1 automake_1:1.18.1-2 autopoint_0.23.1-2 autotools-dev_20240727.1 base-files_14 base-passwd_3.6.7 bash_5.3-1 binutils_2.45-7 binutils-common_2.45-7 binutils-x86-64-linux-gnu_2.45-7 blt_2.5.3+dfsg-8 bsdextrautils_2.41.2-4 build-essential_12.12 bzip2_1.0.8-6 ca-certificates_20250419 coreutils_9.7-3 cpp_4:15.2.0-4 cpp-15_15.2.0-5 cpp-15-x86-64-linux-gnu_15.2.0-5 cpp-x86-64-linux-gnu_4:15.2.0-4 cython3_3.0.11+dfsg-2+b1 dash_0.5.12-12 debconf_1.5.91 debhelper_13.28 debianutils_5.23.2 dh-autoreconf_21 dh-python_6.20250414 dh-strip-nondeterminism_1.15.0-1 diffutils_1:3.12-1 docutils-common_0.22.2+dfsg-2 dpkg_1.22.21 dpkg-dev_1.22.21 dwz_0.16-2 file_1:5.46-5 findutils_4.10.0-3 fontconfig-config_2.15.0-2.4 fonts-dejavu-core_2.37-8 fonts-dejavu-mono_2.37-8 fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1 fonts-lato_2.015-1 fonts-lyx_2.4.4-2 fonts-mathjax_2.7.9+dfsg-1 fonts-open-sans_1.11-2 fonts-urw-base35_20200910-8 g++_4:15.2.0-4 g++-15_15.2.0-5 g++-15-x86-64-linux-gnu_15.2.0-5 g++-x86-64-linux-gnu_4:15.2.0-4 gcc_4:15.2.0-4 gcc-15_15.2.0-5 gcc-15-base_15.2.0-5 gcc-15-x86-64-linux-gnu_15.2.0-5 gcc-x86-64-linux-gnu_4:15.2.0-4 gettext_0.23.1-2+b1 gettext-base_0.23.1-2+b1 grep_3.12-1 groff-base_1.23.0-9 gzip_1.13-1 hostname_3.25 init-system-helpers_1.69 intltool-debian_0.35.0+20060710.6 libabsl20240722_20240722.0-4 libacl1_2.3.2-2+b1 libaec0_1.1.4-2 libaom3_3.13.1-1 libarchive-zip-perl_1.68-1 libasan8_15.2.0-5 libatomic1_15.2.0-5 libattr1_1:2.5.2-3 libaudit-common_1:4.1.2-1 libaudit1_1:4.1.2-1 libavif16_1.3.0-1+b1 libbinutils_2.45-7 libblas3_3.12.1-7 libblkid1_2.41.2-4 libbrotli1_1.1.0-2+b7 libbz2-1.0_1.0.8-6 libc-bin_2.41-12 libc-dev-bin_2.41-12 libc6_2.41-12 libc6-dev_2.41-12 libcairo2_1.18.4-1+b1 libcap-ng0_0.8.5-4+b1 libcap2_1:2.75-10+b1 libcares2_1.34.5-1 libcc1-0_15.2.0-5 libcom-err2_1.47.2-3+b3 libcrypt-dev_1:4.4.38-1 libcrypt1_1:4.4.38-1 libctf-nobfd0_2.45-7 libctf0_2.45-7 libcurl3t64-gnutls_8.17.0~rc2-1 libcurl4t64_8.17.0~rc2-1 libdav1d7_1.5.1-1 libdb5.3t64_5.3.28+dfsg2-10 libdebconfclient0_0.280 libdebhelper-perl_13.28 libdeflate0_1.23-2 libdpkg-perl_1.22.21 libelf1t64_0.193-3 libexpat1_2.7.3-1 libexpat1-dev_2.7.3-1 libffi8_3.5.2-2 libfile-stripnondeterminism-perl_1.15.0-1 libfontconfig1_2.15.0-2.4 libfontenc1_1:1.1.8-1+b2 libfreetype6_2.13.3+dfsg-1 libfribidi0_1.0.16-3 libgav1-1_0.19.0-3+b1 libgcc-15-dev_15.2.0-5 libgcc-s1_15.2.0-5 libgcrypt20_1.11.2-2 libgdbm-compat4t64_1.26-1 libgdbm6t64_1.26-1 libgfortran5_15.2.0-5 libglib2.0-0t64_2.86.1-1 libgmp10_2:6.3.0+dfsg-5 libgnutls30t64_3.8.10-2 libgomp1_15.2.0-5 libgpg-error0_1.56-2 libgprofng0_2.45-7 libgraphite2-3_1.3.14-11 libgssapi-krb5-2_1.21.3-5 libharfbuzz0b_12.1.0-1 libhdf5-310_1.14.5+repack-4 libhdf5-hl-310_1.14.5+repack-4 libhogweed6t64_3.10.2-1 libhwasan0_15.2.0-5 libicu76_76.1-4 libidn2-0_2.3.8-4 libimagequant0_4.4.0-3 libisl23_0.27-1 libitm1_15.2.0-5 libjansson4_2.14-2+b3 libjbig0_2.1-6.1+b2 libjpeg62-turbo_1:2.1.5-4 libjs-jquery_3.7.1+dfsg+~3.5.33-1 libjs-mathjax_2.7.9+dfsg-1 libjs-sphinxdoc_8.2.3-8 libjs-sprintf-js_1.1.2+ds1+~1.1.2-1 libjs-underscore_1.13.4~dfsg+~1.11.4-3 libjson-perl_4.10000-1 libk5crypto3_1.21.3-5 libkeyutils1_1.6.3-6 libkrb5-3_1.21.3-5 libkrb5support0_1.21.3-5 liblapack3_3.12.1-7 liblcms2-2_2.16-2 libldap2_2.6.10+dfsg-1 liblerc4_4.0.0+ds-5 libllhttp9.3_9.3.3~really9.3.0+~cs12.11.8-3 liblsan0_15.2.0-5 liblz4-1_1.10.0-4 liblzf1_3.6-4+b3 liblzma5_5.8.1-2 libmagic-mgc_1:5.46-5 libmagic1t64_1:5.46-5 libmd0_1.1.0-2+b1 libmount1_2.41.2-4 libmpc3_1.3.1-2 libmpfr6_4.2.2-2 libncursesw6_6.5+20250216-2 libnetcdf22_1:4.9.3-1+b1 libnettle8t64_3.10.2-1 libnghttp2-14_1.64.0-1.1+b1 libnghttp3-9_1.12.0-1 libngtcp2-16_1.16.0-1 libngtcp2-crypto-gnutls8_1.16.0-1 libngtcp2-crypto-ossl0_1.16.0-1 libnode115_20.19.5+dfsg+~cs20.19.12-4 libopenjp2-7_2.5.3-2.1 libp11-kit0_0.25.9-2 libpam-modules_1.7.0-5 libpam-modules-bin_1.7.0-5 libpam-runtime_1.7.0-5 libpam0g_1.7.0-5 libpcre2-8-0_10.46-1 libperl5.40_5.40.1-6 libpipeline1_1.5.8-1 libpixman-1-0_0.46.4-1 libpng16-16t64_1.6.50-1 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sysvinit-utils_3.14-4 tar_1.35+dfsg-3.1 tk8.6-blt2.5_2.5.3+dfsg-8 tzdata_2025b-5 unicode-data_16.0.0-1 util-linux_2.41.2-4 w3c-sgml-lib_1.3-3 x11-common_1:7.7+26 xfonts-encodings_1:1.0.4-2.2 xfonts-utils_1:7.7+7 xml-core_0.19 xz-utils_5.8.1-2 zlib1g_1:1.3.dfsg+really1.3.1-1+b1 zlib1g-dev_1:1.3.dfsg+really1.3.1-1+b1 +------------------------------------------------------------------------------+ | Build Sat, 01 Nov 2025 13:34:47 +0000 | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: mdanalysis Binary: python3-mdanalysis, python-mdanalysis-doc Architecture: any all Version: 2.10.0-1 Maintainer: Debichem Team Uploaders: Drew Parsons Homepage: https://www.mdanalysis.org/ Standards-Version: 4.7.2 Vcs-Browser: https://salsa.debian.org/debichem-team/mdanalysis Vcs-Git: https://salsa.debian.org/debichem-team/mdanalysis.git Testsuite: autopkgtest Testsuite-Triggers: @builddeps@, python3-all, python3-hypothesis, python3-pytest, python3-sklearn Build-Depends: debhelper-compat (= 13), cython3, dh-sequence-python3, pybuild-plugin-pyproject, python3-all-dev, python3-setuptools, python3-numpy, python3-numpy-dev, python3-biopython (>= 1.80) [amd64 arm64 armel armhf i386 mips64el ppc64el riscv64 s390x], python3-networkx, python3-griddataformats, python3-mmtf, python3-joblib, python3-scipy, python3-matplotlib, python3-mda-xdrlib, python3-tqdm, python3-threadpoolctl, python3-packaging, python3-filelock, python3-fasteners, python3-gsd (>= 3.0.1~) [!s390x !hppa !m68k !powerpc !ppc64 !sparc64], python3-netcdf4, python3-h5py, python3-seaborn, python3-sklearn, python3-duecredit, python3-hypothesis , python3-pytest , python3-sphinx Build-Depends-Indep: python3-msmb-theme, python3-pybtex, python3-sphinx-rtd-theme, python3-sphinx-sitemap, python3-sphinxcontrib.applehelp, python3-sphinxcontrib.bibtex, python3-sphinxcontrib.devhelp, python3-sphinxcontrib.htmlhelp, python3-sphinxcontrib.qthelp, python3-sphinxcontrib.serializinghtml, python3-doc, python-gsd-doc, python-h5py-doc, python-matplotlib-doc, python-numpy-doc, python-dask-doc, python-scipy-doc, libjs-mathjax, rdkit-doc Package-List: python-mdanalysis-doc deb doc optional arch=all python3-mdanalysis deb python optional arch=any Checksums-Sha1: 7b456bb6e81e6c16eac40444067da4985dfe5ee2 61501775 mdanalysis_2.10.0.orig.tar.gz 0208beaf789953fbb4717fcb904c18e639d378fe 14568 mdanalysis_2.10.0-1.debian.tar.xz Checksums-Sha256: e36ee45e58236a777842f1bf8fdc7a9dc5b1d0836dd450e8ded42a24b40f653b 61501775 mdanalysis_2.10.0.orig.tar.gz a32ea520844a6717dea95fe09cc4bc6aa4e2fde5aab4f19dc767604c5e2ddfa0 14568 mdanalysis_2.10.0-1.debian.tar.xz Files: 1ee5d68c0e0513f27a64e9d4f8025398 61501775 mdanalysis_2.10.0.orig.tar.gz 4a56336ba983b0f26684da7d40951af5 14568 mdanalysis_2.10.0-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- 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/build/reproducible-path/mdanalysis-2.10.0 dpkg-source: info: unpacking mdanalysis_2.10.0.orig.tar.gz dpkg-source: info: unpacking mdanalysis_2.10.0-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying docs_use_built_module.patch dpkg-source: info: applying docs_sphinx_warnings_are_not_errors.patch dpkg-source: info: applying docs_local_mathjax.patch dpkg-source: info: applying doc_no_mdanalysis_sphinx.patch dpkg-source: info: applying improve_test_timeout_PR4584.diff dpkg-source: info: applying skip_gsd_tests.patch dpkg-source: info: applying docs_intersphinx_local.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=6 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LC_COLLATE=C.UTF-8 LC_CTYPE=C.UTF-8 LOGNAME=sbuild PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SHELL=/bin/sh SOURCE_DATE_EPOCH=1761087011 USER=sbuild dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -us -uc -A dpkg-buildpackage: info: source package mdanalysis dpkg-buildpackage: info: source version 2.10.0-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Drew Parsons dpkg-source --before-build . dpkg-source: info: using options from mdanalysis-2.10.0/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ debian/rules clean dh clean --with sphinxdoc --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild debian/rules execute_after_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/mdanalysis-2.10.0' rm -f .duecredit.p rm -f package/MDAnalysis/authors.py rm -f package/MDAnalysis/analysis/encore/clustering/affinityprop.c \ package/MDAnalysis/analysis/encore/cutils.c \ package/MDAnalysis/analysis/encore/dimensionality_reduction/stochasticproxembed.c \ package/MDAnalysis/coordinates/timestep.cpp \ package/MDAnalysis/lib/_augment.cpp \ package/MDAnalysis/lib/_cutil.cpp \ package/MDAnalysis/lib/c_distances.c \ package/MDAnalysis/lib/c_distances_openmp.c \ package/MDAnalysis/lib/formats/cython_util.c \ package/MDAnalysis/lib/formats/libdcd.c \ package/MDAnalysis/lib/formats/libmdaxdr.c \ package/MDAnalysis/lib/nsgrid.cpp \ package/MDAnalysis/lib/qcprot.c rm -rf package/MDAnalysis.egg-info rm -f testsuite/MDAnalysisTests/data/.*_offsets.npz testsuite/MDAnalysisTests/data/*/.*_offsets.npz rm -rf testsuite/.pytest_cache make[1]: Leaving directory '/build/reproducible-path/mdanalysis-2.10.0' dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary-indep dh binary-indep --with sphinxdoc --buildsystem=pybuild dh_update_autotools_config -i -O--buildsystem=pybuild dh_autoreconf -i -O--buildsystem=pybuild dh_auto_configure -i -O--buildsystem=pybuild dh_auto_build -i -O--buildsystem=pybuild I: pybuild plugin_pyproject:129: Building wheel for python3.13 with "build" module I: pybuild base:311: python3.13 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/reproducible-path/mdanalysis-2.10.0/.pybuild/cpython3_3.13_mdanalysis * Building wheel... performance hint: MDAnalysis/lib/c_distances.pyx:275:5: Exception check on '_minimum_image_orthogonal' will always require the GIL to be acquired. Possible solutions: 1. Declare '_minimum_image_orthogonal' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_minimum_image_orthogonal' to allow an error code to be returned. performance hint: MDAnalysis/lib/c_distances.pyx:302:5: Exception check on '_minimum_image_triclinic' will always require the GIL to be acquired. Possible solutions: 1. Declare '_minimum_image_triclinic' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_minimum_image_triclinic' to allow an error code to be returned. performance hint: MDAnalysis/lib/c_distances.pyx:390:37: Exception check after calling '__pyx_fuse_0_minimum_image_orthogonal' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_minimum_image_orthogonal' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0_minimum_image_orthogonal' to allow an error code to be returned. performance hint: MDAnalysis/lib/c_distances.pyx:390:37: Exception check after calling '__pyx_fuse_1_minimum_image_orthogonal' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_minimum_image_orthogonal' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_1_minimum_image_orthogonal' to allow an error code to be returned. performance hint: MDAnalysis/lib/c_distances.pyx:414:36: Exception check after calling '__pyx_fuse_0_minimum_image_triclinic' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_minimum_image_triclinic' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0_minimum_image_triclinic' to allow an error code to be returned. performance hint: MDAnalysis/lib/c_distances.pyx:414:36: Exception check after calling '__pyx_fuse_1_minimum_image_triclinic' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_minimum_image_triclinic' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_1_minimum_image_triclinic' to allow an error code to be returned. performance hint: MDAnalysis/lib/nsgrid.pyx:417:37: Exception check after calling 'coord2cellid' will always require the GIL to be acquired. Declare 'coord2cellid' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: MDAnalysis/lib/nsgrid.pyx:431:26: Exception check after calling 'coord2cellxyz' will always require the GIL to be acquired. Possible solutions: 1. Declare 'coord2cellxyz' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'coord2cellxyz' to allow an error code to be returned. performance hint: MDAnalysis/lib/nsgrid.pyx:559:34: Exception check after calling 'coord2cellxyz' will always require the GIL to be acquired. Possible solutions: 1. Declare 'coord2cellxyz' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'coord2cellxyz' to allow an error code to be returned. performance hint: MDAnalysis/lib/nsgrid.pyx:567:56: Exception check after calling 'cellxyz2cellid' will always require the GIL to be acquired. Declare 'cellxyz2cellid' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: MDAnalysis/lib/nsgrid.pyx:574:53: Exception check after calling 'calc_distsq' will always require the GIL to be acquired. Declare 'calc_distsq' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: MDAnalysis/lib/nsgrid.pyx:578:57: Exception check after calling 'add_neighbors' will always require the GIL to be acquired. Possible solutions: 1. Declare 'add_neighbors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'add_neighbors' to allow an error code to be returned. Attempting to autodetect OpenMP support... Compiler supports OpenMP Will attempt to use Cython. Compiling MDAnalysis/lib/formats/libdcd.pyx because it changed. Compiling MDAnalysis/lib/c_distances.pyx because it changed. Compiling MDAnalysis/lib/c_distances_openmp.pyx because it changed. Compiling MDAnalysis/lib/qcprot.pyx because it changed. Compiling MDAnalysis/lib/formats/libmdaxdr.pyx because it changed. Compiling MDAnalysis/lib/formats/cython_util.pyx because it changed. Compiling MDAnalysis/analysis/encore/cutils.pyx because it changed. Compiling MDAnalysis/analysis/encore/clustering/affinityprop.pyx because it changed. Compiling MDAnalysis/analysis/encore/dimensionality_reduction/stochasticproxembed.pyx because it changed. Compiling MDAnalysis/lib/_cutil.pyx because it changed. Compiling MDAnalysis/lib/_augment.pyx because it changed. Compiling MDAnalysis/lib/nsgrid.pyx because it changed. Compiling MDAnalysis/coordinates/timestep.pyx because it changed. [ 1/13] Cythonizing MDAnalysis/analysis/encore/clustering/affinityprop.pyx [ 2/13] Cythonizing MDAnalysis/analysis/encore/cutils.pyx [ 3/13] Cythonizing MDAnalysis/analysis/encore/dimensionality_reduction/stochasticproxembed.pyx [ 4/13] Cythonizing MDAnalysis/coordinates/timestep.pyx [ 5/13] Cythonizing MDAnalysis/lib/_augment.pyx [ 6/13] Cythonizing MDAnalysis/lib/_cutil.pyx [ 7/13] Cythonizing MDAnalysis/lib/c_distances.pyx [ 8/13] Cythonizing MDAnalysis/lib/c_distances_openmp.pyx [ 9/13] Cythonizing MDAnalysis/lib/formats/cython_util.pyx [10/13] Cythonizing MDAnalysis/lib/formats/libdcd.pyx [11/13] Cythonizing MDAnalysis/lib/formats/libmdaxdr.pyx [12/13] Cythonizing MDAnalysis/lib/nsgrid.pyx [13/13] Cythonizing MDAnalysis/lib/qcprot.pyx /usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'test_suite' warnings.warn(msg) /usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:289: UserWarning: Unknown distribution option: 'tests_require' warnings.warn(msg) /usr/lib/python3/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated !! ******************************************************************************** Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). By 2026-Feb-18, you need to update your project and remove deprecated calls or your builds will no longer be supported. See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! corresp(dist, value, root_dir) /usr/lib/python3/dist-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: GNU Lesser General Public License v3 or later (LGPLv3+) See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! dist._finalize_license_expression() /usr/lib/python3/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: GNU Lesser General Public License v3 or later (LGPLv3+) See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() running bdist_wheel running build running build_py creating build/lib.linux-x86_64-cpython-313/MDAnalysis copying MDAnalysis/units.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis copying MDAnalysis/due.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis copying MDAnalysis/__init__.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis copying MDAnalysis/authors.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis copying MDAnalysis/version.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis copying MDAnalysis/exceptions.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis creating build/lib.linux-x86_64-cpython-313/MDAnalysis/core copying MDAnalysis/core/accessors.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/core copying MDAnalysis/core/selection.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/core copying MDAnalysis/core/topologyobjects.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/core copying MDAnalysis/core/__init__.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/core copying MDAnalysis/core/topologyattrs.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/core copying MDAnalysis/core/_get_readers.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/core copying MDAnalysis/core/topology.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/core copying MDAnalysis/core/groups.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/core copying MDAnalysis/core/universe.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/core creating build/lib.linux-x86_64-cpython-313/MDAnalysis/selections copying MDAnalysis/selections/jmol.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/selections copying MDAnalysis/selections/pymol.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/selections copying MDAnalysis/selections/charmm.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/selections copying MDAnalysis/selections/vmd.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/selections copying MDAnalysis/selections/__init__.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/selections copying MDAnalysis/selections/gromacs.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/selections copying MDAnalysis/selections/base.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/selections creating build/lib.linux-x86_64-cpython-313/MDAnalysis/auxiliary copying MDAnalysis/auxiliary/EDR.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/auxiliary copying MDAnalysis/auxiliary/__init__.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/auxiliary copying MDAnalysis/auxiliary/core.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/auxiliary copying MDAnalysis/auxiliary/base.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/auxiliary copying MDAnalysis/auxiliary/XVG.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/auxiliary creating build/lib.linux-x86_64-cpython-313/MDAnalysis/transformations copying MDAnalysis/transformations/wrap.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/transformations copying MDAnalysis/transformations/translate.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/transformations copying MDAnalysis/transformations/boxdimensions.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/transformations copying MDAnalysis/transformations/positionaveraging.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/transformations copying MDAnalysis/transformations/fit.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/transformations copying MDAnalysis/transformations/__init__.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/transformations copying MDAnalysis/transformations/nojump.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/transformations copying MDAnalysis/transformations/rotate.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/transformations copying MDAnalysis/transformations/base.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/transformations creating build/lib.linux-x86_64-cpython-313/MDAnalysis/guesser copying MDAnalysis/guesser/default_guesser.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/guesser copying MDAnalysis/guesser/__init__.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/guesser copying MDAnalysis/guesser/base.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/guesser copying MDAnalysis/guesser/tables.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/guesser creating build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis copying MDAnalysis/analysis/pca.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis copying MDAnalysis/analysis/leaflet.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis copying MDAnalysis/analysis/dihedrals.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis copying MDAnalysis/analysis/backends.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis copying MDAnalysis/analysis/contacts.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis copying MDAnalysis/analysis/waterdynamics.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis copying MDAnalysis/analysis/atomicdistances.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis copying MDAnalysis/analysis/rms.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis copying MDAnalysis/analysis/nucleicacids.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis copying MDAnalysis/analysis/align.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis copying MDAnalysis/analysis/psa.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis copying MDAnalysis/analysis/lineardensity.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis copying MDAnalysis/analysis/helix_analysis.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis copying MDAnalysis/analysis/distances.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis copying MDAnalysis/analysis/gnm.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis copying MDAnalysis/analysis/__init__.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis copying MDAnalysis/analysis/bat.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis copying MDAnalysis/analysis/rdf.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis copying MDAnalysis/analysis/base.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis copying MDAnalysis/analysis/dielectric.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis copying MDAnalysis/analysis/results.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis copying MDAnalysis/analysis/msd.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis copying MDAnalysis/analysis/nuclinfo.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis copying MDAnalysis/analysis/polymer.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis copying MDAnalysis/analysis/density.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis copying MDAnalysis/analysis/diffusionmap.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis creating build/lib.linux-x86_64-cpython-313/MDAnalysis/topology copying MDAnalysis/topology/PQRParser.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/topology copying MDAnalysis/topology/ParmEdParser.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/topology copying MDAnalysis/topology/GMSParser.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/topology copying MDAnalysis/topology/MOL2Parser.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/topology copying MDAnalysis/topology/CRDParser.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/topology copying MDAnalysis/topology/GSDParser.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/topology copying MDAnalysis/topology/LAMMPSParser.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/topology copying MDAnalysis/topology/MinimalParser.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/topology copying MDAnalysis/topology/FHIAIMSParser.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/topology copying MDAnalysis/topology/ExtendedPDBParser.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/topology copying MDAnalysis/topology/HoomdXMLParser.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/topology copying MDAnalysis/topology/XYZParser.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/topology copying MDAnalysis/topology/guessers.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/topology copying MDAnalysis/topology/PDBParser.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/topology copying MDAnalysis/topology/PSFParser.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/topology copying MDAnalysis/topology/TOPParser.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/topology copying MDAnalysis/topology/__init__.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/topology copying MDAnalysis/topology/core.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/topology copying MDAnalysis/topology/GROParser.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/topology copying MDAnalysis/topology/TPRParser.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/topology copying MDAnalysis/topology/ITPParser.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/topology copying MDAnalysis/topology/base.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/topology copying MDAnalysis/topology/TXYZParser.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/topology copying MDAnalysis/topology/PDBQTParser.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/topology copying MDAnalysis/topology/DMSParser.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/topology copying MDAnalysis/topology/MMTFParser.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/topology copying MDAnalysis/topology/tables.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/topology copying MDAnalysis/topology/DLPolyParser.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/topology creating build/lib.linux-x86_64-cpython-313/MDAnalysis/converters copying MDAnalysis/converters/ParmEdParser.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/converters copying MDAnalysis/converters/RDKitParser.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/converters copying MDAnalysis/converters/ParmEd.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/converters copying MDAnalysis/converters/RDKit.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/converters copying MDAnalysis/converters/OpenMMParser.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/converters copying MDAnalysis/converters/OpenMM.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/converters copying MDAnalysis/converters/__init__.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/converters copying MDAnalysis/converters/RDKitInferring.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/converters copying MDAnalysis/converters/base.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/converters creating build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates copying MDAnalysis/coordinates/TNG.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates copying MDAnalysis/coordinates/MMTF.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates copying MDAnalysis/coordinates/ParmEd.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates copying MDAnalysis/coordinates/chemfiles.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates copying MDAnalysis/coordinates/XDR.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates copying MDAnalysis/coordinates/H5MD.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates copying MDAnalysis/coordinates/TPR.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates copying MDAnalysis/coordinates/TRZ.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates copying MDAnalysis/coordinates/GSD.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates copying MDAnalysis/coordinates/chain.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates copying MDAnalysis/coordinates/MOL2.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates copying MDAnalysis/coordinates/memory.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates copying MDAnalysis/coordinates/LAMMPS.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates copying MDAnalysis/coordinates/TRJ.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates copying MDAnalysis/coordinates/DMS.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates copying MDAnalysis/coordinates/CRD.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates copying MDAnalysis/coordinates/NAMDBIN.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates copying MDAnalysis/coordinates/FHIAIMS.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates copying MDAnalysis/coordinates/IMD.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates copying MDAnalysis/coordinates/XYZ.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates copying MDAnalysis/coordinates/XTC.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates copying MDAnalysis/coordinates/INPCRD.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates copying MDAnalysis/coordinates/__init__.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates copying MDAnalysis/coordinates/core.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates copying MDAnalysis/coordinates/TRC.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates copying MDAnalysis/coordinates/GMS.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates copying MDAnalysis/coordinates/base.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates copying MDAnalysis/coordinates/null.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates copying MDAnalysis/coordinates/TXYZ.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates copying MDAnalysis/coordinates/TRR.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates copying MDAnalysis/coordinates/DLPoly.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates copying MDAnalysis/coordinates/PDBQT.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates copying MDAnalysis/coordinates/PQR.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates copying MDAnalysis/coordinates/GRO.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates copying MDAnalysis/coordinates/PDB.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates copying MDAnalysis/coordinates/DCD.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates creating build/lib.linux-x86_64-cpython-313/MDAnalysis/lib copying MDAnalysis/lib/distances.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib copying MDAnalysis/lib/util.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib copying MDAnalysis/lib/NeighborSearch.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib copying MDAnalysis/lib/__init__.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib copying MDAnalysis/lib/mdamath.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib copying MDAnalysis/lib/pkdtree.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib copying MDAnalysis/lib/correlations.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib copying MDAnalysis/lib/_distopia.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib copying MDAnalysis/lib/transformations.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib copying MDAnalysis/lib/picklable_file_io.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib copying MDAnalysis/lib/log.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib creating build/lib.linux-x86_64-cpython-313/MDAnalysis/tests copying MDAnalysis/tests/__init__.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/tests copying MDAnalysis/tests/datafiles.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/tests creating build/lib.linux-x86_64-cpython-313/MDAnalysis/visualization copying MDAnalysis/visualization/streamlines_3D.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/visualization copying MDAnalysis/visualization/__init__.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/visualization copying MDAnalysis/visualization/streamlines.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/visualization creating build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore copying MDAnalysis/analysis/encore/similarity.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore copying MDAnalysis/analysis/encore/bootstrap.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore copying MDAnalysis/analysis/encore/__init__.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore copying MDAnalysis/analysis/encore/utils.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore copying MDAnalysis/analysis/encore/confdistmatrix.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore copying MDAnalysis/analysis/encore/covariance.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore creating build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/dssp copying MDAnalysis/analysis/dssp/dssp.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/dssp copying MDAnalysis/analysis/dssp/pydssp_numpy.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/dssp copying MDAnalysis/analysis/dssp/__init__.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/dssp creating build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/data copying MDAnalysis/analysis/data/filenames.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/data copying MDAnalysis/analysis/data/__init__.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/data creating build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/hbonds copying MDAnalysis/analysis/hbonds/__init__.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/hbonds copying MDAnalysis/analysis/hbonds/hbond_autocorrel.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/hbonds creating build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/hydrogenbonds copying MDAnalysis/analysis/hydrogenbonds/wbridge_analysis.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/hydrogenbonds copying MDAnalysis/analysis/hydrogenbonds/hbond_analysis.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/hydrogenbonds copying MDAnalysis/analysis/hydrogenbonds/__init__.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/hydrogenbonds copying MDAnalysis/analysis/hydrogenbonds/hbond_autocorrel.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/hydrogenbonds creating build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/legacy copying MDAnalysis/analysis/legacy/x3dna.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/legacy copying MDAnalysis/analysis/legacy/__init__.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/legacy creating build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/hole2 copying MDAnalysis/analysis/hole2/__init__.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/hole2 creating build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/dimensionality_reduction copying MDAnalysis/analysis/encore/dimensionality_reduction/__init__.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/dimensionality_reduction copying MDAnalysis/analysis/encore/dimensionality_reduction/DimensionalityReductionMethod.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/dimensionality_reduction copying MDAnalysis/analysis/encore/dimensionality_reduction/reduce_dimensionality.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/dimensionality_reduction creating build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/clustering copying MDAnalysis/analysis/encore/clustering/cluster.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/clustering copying MDAnalysis/analysis/encore/clustering/ClusterCollection.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/clustering copying MDAnalysis/analysis/encore/clustering/__init__.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/clustering copying MDAnalysis/analysis/encore/clustering/ClusteringMethod.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/clustering creating build/lib.linux-x86_64-cpython-313/MDAnalysis/topology/tpr copying MDAnalysis/topology/tpr/setting.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/topology/tpr copying MDAnalysis/topology/tpr/obj.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/topology/tpr copying MDAnalysis/topology/tpr/__init__.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/topology/tpr copying MDAnalysis/topology/tpr/utils.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/topology/tpr creating build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/include copying MDAnalysis/lib/include/__init__.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/include creating build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats copying MDAnalysis/lib/formats/__init__.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats creating build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/libmdanalysis copying MDAnalysis/lib/libmdanalysis/__init__.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/libmdanalysis creating build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/src/transformations copying MDAnalysis/lib/src/transformations/__init__.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/src/transformations creating build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats/include copying MDAnalysis/lib/formats/include/__init__.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats/include creating build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats/src copying MDAnalysis/lib/formats/src/__init__.py -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats/src creating build/lib.linux-x86_64-cpython-313/doc/sphinx/source copying doc/sphinx/source/conf.py -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source running egg_info creating MDAnalysis.egg-info writing MDAnalysis.egg-info/PKG-INFO writing dependency_links to MDAnalysis.egg-info/dependency_links.txt writing requirements to MDAnalysis.egg-info/requires.txt writing top-level names to MDAnalysis.egg-info/top_level.txt writing manifest file 'MDAnalysis.egg-info/SOURCES.txt' dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /build/reproducible-path/mdanalysis-2.10.0/package/MDAnalysis/lib/include/calc_distances.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /build/reproducible-path/mdanalysis-2.10.0/package/MDAnalysis/lib/include/calc_distances.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /build/reproducible-path/mdanalysis-2.10.0/package/MDAnalysis/analysis/encore/clustering/include/ap.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /build/reproducible-path/mdanalysis-2.10.0/package/MDAnalysis/analysis/encore/dimensionality_reduction/include/spe.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /build/reproducible-path/mdanalysis-2.10.0/package/MDAnalysis/lib/include/calc_distances.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /build/reproducible-path/mdanalysis-2.10.0/package/MDAnalysis/lib/include/calc_distances.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative reading manifest file 'MDAnalysis.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files matching 'doc/html/html' found anywhere in distribution warning: no previously-included files matching '*.pyc' found anywhere in distribution warning: no previously-included files matching '*.pyo' found anywhere in distribution warning: no previously-included files matching '*.pyd' found anywhere in distribution warning: no previously-included files matching '*~' found anywhere in distribution warning: no previously-included files matching '.git' found anywhere in distribution adding license file 'LICENSE' adding license file 'AUTHORS' writing manifest file 'MDAnalysis.egg-info/SOURCES.txt' copying MDAnalysis/analysis/data/janin_ref_data.npy -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/data copying MDAnalysis/analysis/data/rama_ref_data.npy -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/data copying doc/README -> build/lib.linux-x86_64-cpython-313/doc copying MDAnalysis/coordinates/timestep.cpp -> build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates copying MDAnalysis/coordinates/timestep.pxd -> build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates copying MDAnalysis/coordinates/timestep.pyx -> build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates copying MDAnalysis/lib/_augment.cpp -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib copying MDAnalysis/lib/_augment.pyx -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib copying MDAnalysis/lib/_cutil.cpp -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib copying MDAnalysis/lib/_cutil.pxd -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib copying MDAnalysis/lib/_cutil.pyx -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib copying MDAnalysis/lib/c_distances.c -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib copying MDAnalysis/lib/c_distances.pxd -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib copying MDAnalysis/lib/c_distances.pyx -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib copying MDAnalysis/lib/c_distances_openmp.c -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib copying MDAnalysis/lib/c_distances_openmp.pyx -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib copying MDAnalysis/lib/nsgrid.cpp -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib copying MDAnalysis/lib/nsgrid.pyx -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib copying MDAnalysis/lib/qcprot.c -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib copying MDAnalysis/lib/qcprot.pyx -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib copying MDAnalysis/analysis/encore/cutils.c -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore copying MDAnalysis/analysis/encore/cutils.pyx -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore copying MDAnalysis/analysis/encore/dimensionality_reduction/stochasticproxembed.c -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/dimensionality_reduction copying MDAnalysis/analysis/encore/dimensionality_reduction/stochasticproxembed.pyx -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/dimensionality_reduction copying MDAnalysis/analysis/encore/clustering/affinityprop.c -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/clustering copying MDAnalysis/analysis/encore/clustering/affinityprop.pyx -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/clustering creating build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/dimensionality_reduction/include copying MDAnalysis/analysis/encore/dimensionality_reduction/include/spe.h -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/dimensionality_reduction/include creating build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/dimensionality_reduction/src copying MDAnalysis/analysis/encore/dimensionality_reduction/src/spe.c -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/dimensionality_reduction/src creating build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/clustering/include copying MDAnalysis/analysis/encore/clustering/include/ap.h -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/clustering/include creating build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/clustering/src copying MDAnalysis/analysis/encore/clustering/src/ap.c -> build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/clustering/src copying MDAnalysis/lib/include/calc_distances.h -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/include copying MDAnalysis/lib/formats/cython_util.c -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats copying MDAnalysis/lib/formats/cython_util.pxd -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats copying MDAnalysis/lib/formats/cython_util.pyx -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats copying MDAnalysis/lib/formats/libdcd.c -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats copying MDAnalysis/lib/formats/libdcd.pxd -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats copying MDAnalysis/lib/formats/libdcd.pyx -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats copying MDAnalysis/lib/formats/libmdaxdr.c -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats copying MDAnalysis/lib/formats/libmdaxdr.pxd -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats copying MDAnalysis/lib/formats/libmdaxdr.pyx -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats copying MDAnalysis/lib/libmdanalysis/__init__.pxd -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/libmdanalysis copying MDAnalysis/lib/src/transformations/AUTHOR -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/src/transformations copying MDAnalysis/lib/src/transformations/LICENCE -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/src/transformations copying MDAnalysis/lib/src/transformations/transformations.c -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/src/transformations copying MDAnalysis/lib/formats/include/endianswap.h -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats/include copying MDAnalysis/lib/formats/include/fastio.h -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats/include copying MDAnalysis/lib/formats/include/readdcd.h -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats/include copying MDAnalysis/lib/formats/include/trr_seek.h -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats/include copying MDAnalysis/lib/formats/include/xdrfile.h -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats/include copying MDAnalysis/lib/formats/include/xdrfile_trr.h -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats/include copying MDAnalysis/lib/formats/include/xdrfile_xtc.h -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats/include copying MDAnalysis/lib/formats/include/xtc_seek.h -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats/include copying MDAnalysis/lib/formats/src/trr_seek.c -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats/src copying MDAnalysis/lib/formats/src/xdrfile.c -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats/src copying MDAnalysis/lib/formats/src/xdrfile_trr.c -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats/src copying MDAnalysis/lib/formats/src/xdrfile_xtc.c -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats/src copying MDAnalysis/lib/formats/src/xtc_seek.c -> build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats/src copying doc/sphinx/Makefile -> build/lib.linux-x86_64-cpython-313/doc/sphinx copying doc/sphinx/source/index.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source copying doc/sphinx/source/references.bib -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source creating build/lib.linux-x86_64-cpython-313/doc/sphinx/source/images copying doc/sphinx/source/images/AnalysisBase_parallel.png -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/images copying doc/sphinx/source/images/RSMD_plot.png -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/images copying doc/sphinx/source/images/janin_demo_plot.png -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/images copying doc/sphinx/source/images/janin_ref_plot.png -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/images copying doc/sphinx/source/images/msd_demo_plot.png -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/images copying doc/sphinx/source/images/parallelization_time.png -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/images copying doc/sphinx/source/images/rama_demo_plot.png -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/images copying doc/sphinx/source/images/rama_ref_plot.png -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/images creating build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages copying doc/sphinx/source/documentation_pages/analysis_modules.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages copying doc/sphinx/source/documentation_pages/auxiliary_modules.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages copying doc/sphinx/source/documentation_pages/converters.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages copying doc/sphinx/source/documentation_pages/coordinates_modules.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages copying doc/sphinx/source/documentation_pages/core_modules.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages copying doc/sphinx/source/documentation_pages/exceptions.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages copying doc/sphinx/source/documentation_pages/guesser_modules.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages copying doc/sphinx/source/documentation_pages/lib_modules.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages copying doc/sphinx/source/documentation_pages/overview.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages copying doc/sphinx/source/documentation_pages/references.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages copying doc/sphinx/source/documentation_pages/selections.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages copying doc/sphinx/source/documentation_pages/selections_modules.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages copying doc/sphinx/source/documentation_pages/topology.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages copying doc/sphinx/source/documentation_pages/topology_modules.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages copying doc/sphinx/source/documentation_pages/trajectory_transformations.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages copying doc/sphinx/source/documentation_pages/units.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages copying doc/sphinx/source/documentation_pages/version.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages copying doc/sphinx/source/documentation_pages/visualization_modules.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages creating build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/core copying doc/sphinx/source/documentation_pages/core/accessors.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/core copying doc/sphinx/source/documentation_pages/core/groups.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/core copying doc/sphinx/source/documentation_pages/core/init.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/core copying doc/sphinx/source/documentation_pages/core/selection.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/core copying doc/sphinx/source/documentation_pages/core/topology.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/core copying doc/sphinx/source/documentation_pages/core/topologyattrs.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/core copying doc/sphinx/source/documentation_pages/core/topologyobjects.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/core copying doc/sphinx/source/documentation_pages/core/universe.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/core creating build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/selections copying doc/sphinx/source/documentation_pages/selections/base.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/selections copying doc/sphinx/source/documentation_pages/selections/charmm.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/selections copying doc/sphinx/source/documentation_pages/selections/gromacs.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/selections copying doc/sphinx/source/documentation_pages/selections/jmol.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/selections copying doc/sphinx/source/documentation_pages/selections/pymol.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/selections copying doc/sphinx/source/documentation_pages/selections/vmd.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/selections creating build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/auxiliary copying doc/sphinx/source/documentation_pages/auxiliary/EDR.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/auxiliary copying doc/sphinx/source/documentation_pages/auxiliary/XVG.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/auxiliary copying doc/sphinx/source/documentation_pages/auxiliary/base.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/auxiliary copying doc/sphinx/source/documentation_pages/auxiliary/core.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/auxiliary copying doc/sphinx/source/documentation_pages/auxiliary/init.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/auxiliary creating build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/guesser_modules copying doc/sphinx/source/documentation_pages/guesser_modules/base.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/guesser_modules copying doc/sphinx/source/documentation_pages/guesser_modules/default_guesser.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/guesser_modules copying doc/sphinx/source/documentation_pages/guesser_modules/init.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/guesser_modules copying doc/sphinx/source/documentation_pages/guesser_modules/tables.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/guesser_modules creating build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/transformations copying doc/sphinx/source/documentation_pages/transformations/base.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/transformations copying doc/sphinx/source/documentation_pages/transformations/boxdimensions.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/transformations copying doc/sphinx/source/documentation_pages/transformations/fit.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/transformations copying doc/sphinx/source/documentation_pages/transformations/nojump.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/transformations copying doc/sphinx/source/documentation_pages/transformations/positionaveraging.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/transformations copying doc/sphinx/source/documentation_pages/transformations/rotate.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/transformations copying doc/sphinx/source/documentation_pages/transformations/translate.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/transformations copying doc/sphinx/source/documentation_pages/transformations/wrap.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/transformations creating build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis copying doc/sphinx/source/documentation_pages/analysis/align.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis copying doc/sphinx/source/documentation_pages/analysis/atomicdistances.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis copying doc/sphinx/source/documentation_pages/analysis/backends.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis copying doc/sphinx/source/documentation_pages/analysis/base.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis copying doc/sphinx/source/documentation_pages/analysis/bat.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis copying doc/sphinx/source/documentation_pages/analysis/contacts.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis copying doc/sphinx/source/documentation_pages/analysis/data.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis copying doc/sphinx/source/documentation_pages/analysis/density.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis copying doc/sphinx/source/documentation_pages/analysis/dielectric.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis copying doc/sphinx/source/documentation_pages/analysis/diffusionmap.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis copying doc/sphinx/source/documentation_pages/analysis/dihedrals.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis copying doc/sphinx/source/documentation_pages/analysis/distances.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis copying doc/sphinx/source/documentation_pages/analysis/dssp.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis copying doc/sphinx/source/documentation_pages/analysis/encore.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis copying doc/sphinx/source/documentation_pages/analysis/gnm.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis copying doc/sphinx/source/documentation_pages/analysis/hbond_autocorrel.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis copying doc/sphinx/source/documentation_pages/analysis/hbond_autocorrel_deprecated.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis copying doc/sphinx/source/documentation_pages/analysis/helix_analysis.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis copying doc/sphinx/source/documentation_pages/analysis/hole2.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis copying doc/sphinx/source/documentation_pages/analysis/hydrogenbonds.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis copying doc/sphinx/source/documentation_pages/analysis/leaflet.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis copying doc/sphinx/source/documentation_pages/analysis/legacy_modules.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis copying doc/sphinx/source/documentation_pages/analysis/lineardensity.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis copying doc/sphinx/source/documentation_pages/analysis/msd.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis copying doc/sphinx/source/documentation_pages/analysis/nucleicacids.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis copying doc/sphinx/source/documentation_pages/analysis/nuclinfo.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis copying doc/sphinx/source/documentation_pages/analysis/parallelization.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis copying doc/sphinx/source/documentation_pages/analysis/pca.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis copying doc/sphinx/source/documentation_pages/analysis/polymer.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis copying doc/sphinx/source/documentation_pages/analysis/psa.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis copying doc/sphinx/source/documentation_pages/analysis/rdf.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis copying doc/sphinx/source/documentation_pages/analysis/results.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis copying doc/sphinx/source/documentation_pages/analysis/rms.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis copying doc/sphinx/source/documentation_pages/analysis/waterdynamics.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis copying doc/sphinx/source/documentation_pages/analysis/wbridge_analysis.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis creating build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology copying doc/sphinx/source/documentation_pages/topology/CRDParser.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology copying doc/sphinx/source/documentation_pages/topology/DLPolyParser.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology copying doc/sphinx/source/documentation_pages/topology/DMSParser.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology copying doc/sphinx/source/documentation_pages/topology/ExtendedPDBParser.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology copying doc/sphinx/source/documentation_pages/topology/FHIAIMSParser.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology copying doc/sphinx/source/documentation_pages/topology/GMSParser.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology copying doc/sphinx/source/documentation_pages/topology/GROParser.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology copying doc/sphinx/source/documentation_pages/topology/GSDParser.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology copying doc/sphinx/source/documentation_pages/topology/HoomdXMLParser.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology copying doc/sphinx/source/documentation_pages/topology/ITPParser.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology copying doc/sphinx/source/documentation_pages/topology/LAMMPSParser.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology copying doc/sphinx/source/documentation_pages/topology/MMTFParser.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology copying doc/sphinx/source/documentation_pages/topology/MOL2Parser.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology copying doc/sphinx/source/documentation_pages/topology/MinimalParser.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology copying doc/sphinx/source/documentation_pages/topology/PDBParser.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology copying doc/sphinx/source/documentation_pages/topology/PDBQTParser.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology copying doc/sphinx/source/documentation_pages/topology/PQRParser.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology copying doc/sphinx/source/documentation_pages/topology/PSFParser.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology copying doc/sphinx/source/documentation_pages/topology/TOPParser.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology copying doc/sphinx/source/documentation_pages/topology/TPRParser.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology copying doc/sphinx/source/documentation_pages/topology/TXYZParser.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology copying doc/sphinx/source/documentation_pages/topology/XYZParser.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology copying doc/sphinx/source/documentation_pages/topology/base.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology copying doc/sphinx/source/documentation_pages/topology/core.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology copying doc/sphinx/source/documentation_pages/topology/guessers.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology copying doc/sphinx/source/documentation_pages/topology/init.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology copying doc/sphinx/source/documentation_pages/topology/tables.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology copying doc/sphinx/source/documentation_pages/topology/tpr_util.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology creating build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/converters copying doc/sphinx/source/documentation_pages/converters/OpenMM.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/converters copying doc/sphinx/source/documentation_pages/converters/ParmEd.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/converters copying doc/sphinx/source/documentation_pages/converters/RDKit.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/converters copying doc/sphinx/source/documentation_pages/converters/base.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/converters creating build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates copying doc/sphinx/source/documentation_pages/coordinates/CRD.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates copying doc/sphinx/source/documentation_pages/coordinates/DCD.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates copying doc/sphinx/source/documentation_pages/coordinates/DLPoly.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates copying doc/sphinx/source/documentation_pages/coordinates/DMS.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates copying doc/sphinx/source/documentation_pages/coordinates/FHIAIMS.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates copying doc/sphinx/source/documentation_pages/coordinates/GMS.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates copying doc/sphinx/source/documentation_pages/coordinates/GRO.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates copying doc/sphinx/source/documentation_pages/coordinates/GSD.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates copying doc/sphinx/source/documentation_pages/coordinates/H5MD.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates copying doc/sphinx/source/documentation_pages/coordinates/IMD.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates copying doc/sphinx/source/documentation_pages/coordinates/INPCRD.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates copying doc/sphinx/source/documentation_pages/coordinates/LAMMPS.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates copying doc/sphinx/source/documentation_pages/coordinates/MMTF.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates copying doc/sphinx/source/documentation_pages/coordinates/MOL2.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates copying doc/sphinx/source/documentation_pages/coordinates/NAMDBIN.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates copying doc/sphinx/source/documentation_pages/coordinates/PDB.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates copying doc/sphinx/source/documentation_pages/coordinates/PDBQT.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates copying doc/sphinx/source/documentation_pages/coordinates/PQR.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates copying doc/sphinx/source/documentation_pages/coordinates/TNG.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates copying doc/sphinx/source/documentation_pages/coordinates/TPR.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates copying doc/sphinx/source/documentation_pages/coordinates/TRC.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates copying doc/sphinx/source/documentation_pages/coordinates/TRJ.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates copying doc/sphinx/source/documentation_pages/coordinates/TRR.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates copying doc/sphinx/source/documentation_pages/coordinates/TRZ.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates copying doc/sphinx/source/documentation_pages/coordinates/TXYZ.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates copying doc/sphinx/source/documentation_pages/coordinates/XDR.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates copying doc/sphinx/source/documentation_pages/coordinates/XTC.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates copying doc/sphinx/source/documentation_pages/coordinates/XYZ.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates copying doc/sphinx/source/documentation_pages/coordinates/base.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates copying doc/sphinx/source/documentation_pages/coordinates/chain.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates copying doc/sphinx/source/documentation_pages/coordinates/chemfiles.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates copying doc/sphinx/source/documentation_pages/coordinates/core.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates copying doc/sphinx/source/documentation_pages/coordinates/init.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates copying doc/sphinx/source/documentation_pages/coordinates/memory.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates copying doc/sphinx/source/documentation_pages/coordinates/null.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates copying doc/sphinx/source/documentation_pages/coordinates/pickle_readers.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates copying doc/sphinx/source/documentation_pages/coordinates/timestep.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates creating build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/lib copying doc/sphinx/source/documentation_pages/lib/NeighborSearch.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/lib copying doc/sphinx/source/documentation_pages/lib/c_distances.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/lib copying doc/sphinx/source/documentation_pages/lib/c_distances_openmp.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/lib copying doc/sphinx/source/documentation_pages/lib/correlations.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/lib copying doc/sphinx/source/documentation_pages/lib/distances.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/lib copying doc/sphinx/source/documentation_pages/lib/log.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/lib copying doc/sphinx/source/documentation_pages/lib/mdamath.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/lib copying doc/sphinx/source/documentation_pages/lib/nsgrid.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/lib copying doc/sphinx/source/documentation_pages/lib/picklable_file_io.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/lib copying doc/sphinx/source/documentation_pages/lib/pkdtree.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/lib copying doc/sphinx/source/documentation_pages/lib/qcprot.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/lib copying doc/sphinx/source/documentation_pages/lib/transformations.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/lib copying doc/sphinx/source/documentation_pages/lib/util.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/lib creating build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/visualization copying doc/sphinx/source/documentation_pages/visualization/streamlines.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/visualization copying doc/sphinx/source/documentation_pages/visualization/streamlines_3D.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/visualization copying doc/sphinx/source/documentation_pages/visualization/test_streamplot_3D.png -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/visualization copying doc/sphinx/source/documentation_pages/visualization/testing_streamline.png -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/visualization creating build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/encore copying doc/sphinx/source/documentation_pages/analysis/encore/bootstrap.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/encore copying doc/sphinx/source/documentation_pages/analysis/encore/clustering.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/encore copying doc/sphinx/source/documentation_pages/analysis/encore/confdistmatrix.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/encore copying doc/sphinx/source/documentation_pages/analysis/encore/covariance.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/encore copying doc/sphinx/source/documentation_pages/analysis/encore/dimensionality_reduction.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/encore copying doc/sphinx/source/documentation_pages/analysis/encore/similarity.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/encore copying doc/sphinx/source/documentation_pages/analysis/encore/utils.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/encore creating build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/legacy copying doc/sphinx/source/documentation_pages/analysis/legacy/x3dna.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/legacy creating build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/lib/formats copying doc/sphinx/source/documentation_pages/lib/formats/libdcd.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/lib/formats copying doc/sphinx/source/documentation_pages/lib/formats/libmdaxdr.rst -> build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/lib/formats running build_ext building 'MDAnalysis.lib.formats.libdcd' extension creating build/temp.linux-x86_64-cpython-313/MDAnalysis/lib/formats x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mdanalysis-2.10.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/build/reproducible-path/mdanalysis-2.10.0/package/MDAnalysis/lib/formats -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/build/reproducible-path/mdanalysis-2.10.0/package/MDAnalysis/lib/formats/include -I/usr/include/python3.13 -c MDAnalysis/lib/formats/libdcd.c -o build/temp.linux-x86_64-cpython-313/MDAnalysis/lib/formats/libdcd.o -std=c11 -O3 -funroll-loops -fsigned-zeros x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mdanalysis-2.10.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-313/MDAnalysis/lib/formats/libdcd.o -L/usr/lib/x86_64-linux-gnu -o build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats/libdcd.cpython-313-x86_64-linux-gnu.so building 'MDAnalysis.lib.c_distances' extension x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mdanalysis-2.10.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/build/reproducible-path/mdanalysis-2.10.0/package/MDAnalysis/lib/include -I/usr/include/python3.13 -c MDAnalysis/lib/c_distances.c -o build/temp.linux-x86_64-cpython-313/MDAnalysis/lib/c_distances.o -std=c11 -O3 -funroll-loops -fsigned-zeros x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mdanalysis-2.10.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-313/MDAnalysis/lib/c_distances.o -L/usr/lib/x86_64-linux-gnu -lm -o build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/c_distances.cpython-313-x86_64-linux-gnu.so building 'MDAnalysis.lib.c_distances_openmp' extension x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mdanalysis-2.10.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DPARALLEL -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/build/reproducible-path/mdanalysis-2.10.0/package/MDAnalysis/lib/include -I/usr/include/python3.13 -c MDAnalysis/lib/c_distances_openmp.c -o build/temp.linux-x86_64-cpython-313/MDAnalysis/lib/c_distances_openmp.o -fopenmp -std=c11 -O3 -funroll-loops -fsigned-zeros x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mdanalysis-2.10.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-313/MDAnalysis/lib/c_distances_openmp.o -L/usr/lib/x86_64-linux-gnu -lm -lgomp -o build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/c_distances_openmp.cpython-313-x86_64-linux-gnu.so -fopenmp building 'MDAnalysis.lib.qcprot' extension x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mdanalysis-2.10.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MDAnalysis/lib/qcprot.c -o build/temp.linux-x86_64-cpython-313/MDAnalysis/lib/qcprot.o -std=c11 -O3 -funroll-loops -fsigned-zeros x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mdanalysis-2.10.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-313/MDAnalysis/lib/qcprot.o -L/usr/lib/x86_64-linux-gnu -o build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/qcprot.cpython-313-x86_64-linux-gnu.so building 'MDAnalysis.lib._transformations' extension creating build/temp.linux-x86_64-cpython-313/MDAnalysis/lib/src/transformations x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mdanalysis-2.10.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MDAnalysis/lib/src/transformations/transformations.c -o build/temp.linux-x86_64-cpython-313/MDAnalysis/lib/src/transformations/transformations.o -std=c11 -O3 -funroll-loops -fsigned-zeros x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mdanalysis-2.10.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-313/MDAnalysis/lib/src/transformations/transformations.o -L/usr/lib/x86_64-linux-gnu -lm -o build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/_transformations.cpython-313-x86_64-linux-gnu.so building 'MDAnalysis.lib.formats.libmdaxdr' extension creating build/temp.linux-x86_64-cpython-313/MDAnalysis/lib/formats/src x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mdanalysis-2.10.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -I/build/reproducible-path/mdanalysis-2.10.0/package/MDAnalysis/lib/formats -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/build/reproducible-path/mdanalysis-2.10.0/package/MDAnalysis/lib/formats/include -I/build/reproducible-path/mdanalysis-2.10.0/package/MDAnalysis/lib/formats -I/usr/include/python3.13 -c MDAnalysis/lib/formats/libmdaxdr.c -o build/temp.linux-x86_64-cpython-313/MDAnalysis/lib/formats/libmdaxdr.o -std=c11 -O3 -funroll-loops -fsigned-zeros x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mdanalysis-2.10.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -I/build/reproducible-path/mdanalysis-2.10.0/package/MDAnalysis/lib/formats -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/build/reproducible-path/mdanalysis-2.10.0/package/MDAnalysis/lib/formats/include -I/build/reproducible-path/mdanalysis-2.10.0/package/MDAnalysis/lib/formats -I/usr/include/python3.13 -c MDAnalysis/lib/formats/src/trr_seek.c -o build/temp.linux-x86_64-cpython-313/MDAnalysis/lib/formats/src/trr_seek.o -std=c11 -O3 -funroll-loops -fsigned-zeros x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mdanalysis-2.10.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -I/build/reproducible-path/mdanalysis-2.10.0/package/MDAnalysis/lib/formats -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/build/reproducible-path/mdanalysis-2.10.0/package/MDAnalysis/lib/formats/include -I/build/reproducible-path/mdanalysis-2.10.0/package/MDAnalysis/lib/formats -I/usr/include/python3.13 -c MDAnalysis/lib/formats/src/xdrfile.c -o build/temp.linux-x86_64-cpython-313/MDAnalysis/lib/formats/src/xdrfile.o -std=c11 -O3 -funroll-loops -fsigned-zeros x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mdanalysis-2.10.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -I/build/reproducible-path/mdanalysis-2.10.0/package/MDAnalysis/lib/formats -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/build/reproducible-path/mdanalysis-2.10.0/package/MDAnalysis/lib/formats/include -I/build/reproducible-path/mdanalysis-2.10.0/package/MDAnalysis/lib/formats -I/usr/include/python3.13 -c MDAnalysis/lib/formats/src/xdrfile_trr.c -o build/temp.linux-x86_64-cpython-313/MDAnalysis/lib/formats/src/xdrfile_trr.o -std=c11 -O3 -funroll-loops -fsigned-zeros x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mdanalysis-2.10.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -I/build/reproducible-path/mdanalysis-2.10.0/package/MDAnalysis/lib/formats -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/build/reproducible-path/mdanalysis-2.10.0/package/MDAnalysis/lib/formats/include -I/build/reproducible-path/mdanalysis-2.10.0/package/MDAnalysis/lib/formats -I/usr/include/python3.13 -c MDAnalysis/lib/formats/src/xdrfile_xtc.c -o build/temp.linux-x86_64-cpython-313/MDAnalysis/lib/formats/src/xdrfile_xtc.o -std=c11 -O3 -funroll-loops -fsigned-zeros x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mdanalysis-2.10.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -I/build/reproducible-path/mdanalysis-2.10.0/package/MDAnalysis/lib/formats -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/build/reproducible-path/mdanalysis-2.10.0/package/MDAnalysis/lib/formats/include -I/build/reproducible-path/mdanalysis-2.10.0/package/MDAnalysis/lib/formats -I/usr/include/python3.13 -c MDAnalysis/lib/formats/src/xtc_seek.c -o build/temp.linux-x86_64-cpython-313/MDAnalysis/lib/formats/src/xtc_seek.o -std=c11 -O3 -funroll-loops -fsigned-zeros x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mdanalysis-2.10.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-313/MDAnalysis/lib/formats/libmdaxdr.o build/temp.linux-x86_64-cpython-313/MDAnalysis/lib/formats/src/trr_seek.o build/temp.linux-x86_64-cpython-313/MDAnalysis/lib/formats/src/xdrfile.o build/temp.linux-x86_64-cpython-313/MDAnalysis/lib/formats/src/xdrfile_trr.o build/temp.linux-x86_64-cpython-313/MDAnalysis/lib/formats/src/xdrfile_xtc.o build/temp.linux-x86_64-cpython-313/MDAnalysis/lib/formats/src/xtc_seek.o -L/usr/lib/x86_64-linux-gnu -o build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats/libmdaxdr.cpython-313-x86_64-linux-gnu.so building 'MDAnalysis.lib.formats.cython_util' extension x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mdanalysis-2.10.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MDAnalysis/lib/formats/cython_util.c -o build/temp.linux-x86_64-cpython-313/MDAnalysis/lib/formats/cython_util.o -std=c11 -O3 -funroll-loops -fsigned-zeros x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mdanalysis-2.10.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-313/MDAnalysis/lib/formats/cython_util.o -L/usr/lib/x86_64-linux-gnu -o build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats/cython_util.cpython-313-x86_64-linux-gnu.so building 'MDAnalysis.analysis.encore.cutils' extension creating build/temp.linux-x86_64-cpython-313/MDAnalysis/analysis/encore x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mdanalysis-2.10.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MDAnalysis/analysis/encore/cutils.c -o build/temp.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/cutils.o -std=c11 -funroll-loops -fsigned-zeros -O3 x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mdanalysis-2.10.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/cutils.o -L/usr/lib/x86_64-linux-gnu -o build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/cutils.cpython-313-x86_64-linux-gnu.so building 'MDAnalysis.analysis.encore.clustering.affinityprop' extension creating build/temp.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/clustering creating build/temp.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/clustering/src x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mdanalysis-2.10.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/build/reproducible-path/mdanalysis-2.10.0/package/MDAnalysis/analysis/encore/clustering/include -I/usr/include/python3.13 -c MDAnalysis/analysis/encore/clustering/affinityprop.c -o build/temp.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/clustering/affinityprop.o -std=c11 -funroll-loops -fsigned-zeros -O3 x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mdanalysis-2.10.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/build/reproducible-path/mdanalysis-2.10.0/package/MDAnalysis/analysis/encore/clustering/include -I/usr/include/python3.13 -c MDAnalysis/analysis/encore/clustering/src/ap.c -o build/temp.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/clustering/src/ap.o -std=c11 -funroll-loops -fsigned-zeros -O3 x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mdanalysis-2.10.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/clustering/affinityprop.o build/temp.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/clustering/src/ap.o -L/usr/lib/x86_64-linux-gnu -lm -o build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/clustering/affinityprop.cpython-313-x86_64-linux-gnu.so building 'MDAnalysis.analysis.encore.dimensionality_reduction.stochasticproxembed' extension creating build/temp.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/dimensionality_reduction/src x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mdanalysis-2.10.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/build/reproducible-path/mdanalysis-2.10.0/package/MDAnalysis/analysis/encore/dimensionality_reduction/include -I/usr/include/python3.13 -c MDAnalysis/analysis/encore/dimensionality_reduction/src/spe.c -o build/temp.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/dimensionality_reduction/src/spe.o -std=c11 -funroll-loops -fsigned-zeros -O3 x86_64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mdanalysis-2.10.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/build/reproducible-path/mdanalysis-2.10.0/package/MDAnalysis/analysis/encore/dimensionality_reduction/include -I/usr/include/python3.13 -c MDAnalysis/analysis/encore/dimensionality_reduction/stochasticproxembed.c -o build/temp.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/dimensionality_reduction/stochasticproxembed.o -std=c11 -funroll-loops -fsigned-zeros -O3 x86_64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mdanalysis-2.10.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/dimensionality_reduction/src/spe.o build/temp.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/dimensionality_reduction/stochasticproxembed.o -L/usr/lib/x86_64-linux-gnu -lm -o build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/dimensionality_reduction/stochasticproxembed.cpython-313-x86_64-linux-gnu.so building 'MDAnalysis.lib._cutil' extension x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/mdanalysis-2.10.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/build/reproducible-path/mdanalysis-2.10.0/package/MDAnalysis/lib/include -I/usr/include/python3.13 -c MDAnalysis/lib/_cutil.cpp -o build/temp.linux-x86_64-cpython-313/MDAnalysis/lib/_cutil.o -O3 -funroll-loops -fsigned-zeros -std=c++11 x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/mdanalysis-2.10.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -O2 -ffile-prefix-map=/build/reproducible-path/mdanalysis-2.10.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-313/MDAnalysis/lib/_cutil.o -L/usr/lib/x86_64-linux-gnu -lm -o build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/_cutil.cpython-313-x86_64-linux-gnu.so building 'MDAnalysis.lib._augment' extension x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/mdanalysis-2.10.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MDAnalysis/lib/_augment.cpp -o build/temp.linux-x86_64-cpython-313/MDAnalysis/lib/_augment.o -O3 -funroll-loops -fsigned-zeros -std=c++11 x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/mdanalysis-2.10.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -O2 -ffile-prefix-map=/build/reproducible-path/mdanalysis-2.10.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-313/MDAnalysis/lib/_augment.o -L/usr/lib/x86_64-linux-gnu -o build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/_augment.cpython-313-x86_64-linux-gnu.so building 'MDAnalysis.lib.nsgrid' extension x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/mdanalysis-2.10.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/build/reproducible-path/mdanalysis-2.10.0/package/MDAnalysis/lib/include -I/usr/include/python3.13 -c MDAnalysis/lib/nsgrid.cpp -o build/temp.linux-x86_64-cpython-313/MDAnalysis/lib/nsgrid.o -O3 -funroll-loops -fsigned-zeros -std=c++11 x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/mdanalysis-2.10.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -O2 -ffile-prefix-map=/build/reproducible-path/mdanalysis-2.10.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-313/MDAnalysis/lib/nsgrid.o -L/usr/lib/x86_64-linux-gnu -o build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/nsgrid.cpython-313-x86_64-linux-gnu.so building 'MDAnalysis.coordinates.timestep' extension creating build/temp.linux-x86_64-cpython-313/MDAnalysis/coordinates x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/mdanalysis-2.10.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MDAnalysis/coordinates/timestep.cpp -o build/temp.linux-x86_64-cpython-313/MDAnalysis/coordinates/timestep.o -O3 -funroll-loops -fsigned-zeros -std=c++11 x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/mdanalysis-2.10.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -O2 -ffile-prefix-map=/build/reproducible-path/mdanalysis-2.10.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-cpython-313/MDAnalysis/coordinates/timestep.o -L/usr/lib/x86_64-linux-gnu -o build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates/timestep.cpython-313-x86_64-linux-gnu.so installing to build/bdist.linux-x86_64/wheel running install running install_lib creating build/bdist.linux-x86_64/wheel creating build/bdist.linux-x86_64/wheel/MDAnalysis creating build/bdist.linux-x86_64/wheel/MDAnalysis/core copying build/lib.linux-x86_64-cpython-313/MDAnalysis/core/accessors.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/core copying build/lib.linux-x86_64-cpython-313/MDAnalysis/core/selection.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/core copying build/lib.linux-x86_64-cpython-313/MDAnalysis/core/topologyobjects.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/core copying build/lib.linux-x86_64-cpython-313/MDAnalysis/core/__init__.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/core copying build/lib.linux-x86_64-cpython-313/MDAnalysis/core/topologyattrs.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/core copying build/lib.linux-x86_64-cpython-313/MDAnalysis/core/_get_readers.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/core copying build/lib.linux-x86_64-cpython-313/MDAnalysis/core/topology.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/core copying build/lib.linux-x86_64-cpython-313/MDAnalysis/core/groups.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/core copying build/lib.linux-x86_64-cpython-313/MDAnalysis/core/universe.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/core creating build/bdist.linux-x86_64/wheel/MDAnalysis/selections copying build/lib.linux-x86_64-cpython-313/MDAnalysis/selections/jmol.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/selections copying build/lib.linux-x86_64-cpython-313/MDAnalysis/selections/pymol.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/selections copying build/lib.linux-x86_64-cpython-313/MDAnalysis/selections/charmm.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/selections copying build/lib.linux-x86_64-cpython-313/MDAnalysis/selections/vmd.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/selections copying build/lib.linux-x86_64-cpython-313/MDAnalysis/selections/__init__.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/selections copying build/lib.linux-x86_64-cpython-313/MDAnalysis/selections/gromacs.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/selections copying build/lib.linux-x86_64-cpython-313/MDAnalysis/selections/base.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/selections creating build/bdist.linux-x86_64/wheel/MDAnalysis/auxiliary copying build/lib.linux-x86_64-cpython-313/MDAnalysis/auxiliary/EDR.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/auxiliary copying build/lib.linux-x86_64-cpython-313/MDAnalysis/auxiliary/__init__.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/auxiliary copying build/lib.linux-x86_64-cpython-313/MDAnalysis/auxiliary/core.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/auxiliary copying build/lib.linux-x86_64-cpython-313/MDAnalysis/auxiliary/base.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/auxiliary copying build/lib.linux-x86_64-cpython-313/MDAnalysis/auxiliary/XVG.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/auxiliary creating build/bdist.linux-x86_64/wheel/MDAnalysis/transformations copying build/lib.linux-x86_64-cpython-313/MDAnalysis/transformations/wrap.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/transformations copying build/lib.linux-x86_64-cpython-313/MDAnalysis/transformations/translate.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/transformations copying build/lib.linux-x86_64-cpython-313/MDAnalysis/transformations/boxdimensions.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/transformations copying build/lib.linux-x86_64-cpython-313/MDAnalysis/transformations/positionaveraging.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/transformations copying build/lib.linux-x86_64-cpython-313/MDAnalysis/transformations/fit.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/transformations copying build/lib.linux-x86_64-cpython-313/MDAnalysis/transformations/__init__.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/transformations copying build/lib.linux-x86_64-cpython-313/MDAnalysis/transformations/nojump.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/transformations copying build/lib.linux-x86_64-cpython-313/MDAnalysis/transformations/rotate.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/transformations copying build/lib.linux-x86_64-cpython-313/MDAnalysis/transformations/base.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/transformations creating build/bdist.linux-x86_64/wheel/MDAnalysis/guesser copying build/lib.linux-x86_64-cpython-313/MDAnalysis/guesser/default_guesser.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/guesser copying build/lib.linux-x86_64-cpython-313/MDAnalysis/guesser/__init__.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/guesser copying build/lib.linux-x86_64-cpython-313/MDAnalysis/guesser/base.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/guesser copying build/lib.linux-x86_64-cpython-313/MDAnalysis/guesser/tables.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/guesser creating build/bdist.linux-x86_64/wheel/MDAnalysis/analysis copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/pca.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/leaflet.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis creating build/bdist.linux-x86_64/wheel/MDAnalysis/analysis/encore copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/similarity.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis/encore copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/bootstrap.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis/encore copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/cutils.pyx -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis/encore copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/__init__.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis/encore copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/cutils.c -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis/encore copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/utils.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis/encore creating build/bdist.linux-x86_64/wheel/MDAnalysis/analysis/encore/dimensionality_reduction copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/dimensionality_reduction/stochasticproxembed.cpython-313-x86_64-linux-gnu.so -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis/encore/dimensionality_reduction copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/dimensionality_reduction/stochasticproxembed.c -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis/encore/dimensionality_reduction creating build/bdist.linux-x86_64/wheel/MDAnalysis/analysis/encore/dimensionality_reduction/include copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/dimensionality_reduction/include/spe.h -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis/encore/dimensionality_reduction/include creating build/bdist.linux-x86_64/wheel/MDAnalysis/analysis/encore/dimensionality_reduction/src copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/dimensionality_reduction/src/spe.c -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis/encore/dimensionality_reduction/src copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/dimensionality_reduction/stochasticproxembed.pyx -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis/encore/dimensionality_reduction copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/dimensionality_reduction/__init__.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis/encore/dimensionality_reduction copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/dimensionality_reduction/DimensionalityReductionMethod.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis/encore/dimensionality_reduction copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/dimensionality_reduction/reduce_dimensionality.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis/encore/dimensionality_reduction copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/confdistmatrix.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis/encore creating build/bdist.linux-x86_64/wheel/MDAnalysis/analysis/encore/clustering copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/clustering/cluster.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis/encore/clustering creating build/bdist.linux-x86_64/wheel/MDAnalysis/analysis/encore/clustering/include copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/clustering/include/ap.h -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis/encore/clustering/include creating build/bdist.linux-x86_64/wheel/MDAnalysis/analysis/encore/clustering/src copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/clustering/src/ap.c -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis/encore/clustering/src copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/clustering/affinityprop.pyx -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis/encore/clustering copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/clustering/affinityprop.c -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis/encore/clustering copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/clustering/affinityprop.cpython-313-x86_64-linux-gnu.so -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis/encore/clustering copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/clustering/ClusterCollection.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis/encore/clustering copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/clustering/__init__.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis/encore/clustering copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/clustering/ClusteringMethod.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis/encore/clustering copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/covariance.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis/encore copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/encore/cutils.cpython-313-x86_64-linux-gnu.so -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis/encore copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/dihedrals.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/backends.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/contacts.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/waterdynamics.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis creating build/bdist.linux-x86_64/wheel/MDAnalysis/analysis/dssp copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/dssp/dssp.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis/dssp copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/dssp/pydssp_numpy.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis/dssp copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/dssp/__init__.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis/dssp copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/atomicdistances.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/rms.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis creating build/bdist.linux-x86_64/wheel/MDAnalysis/analysis/data copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/data/janin_ref_data.npy -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis/data copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/data/filenames.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis/data copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/data/__init__.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis/data copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/data/rama_ref_data.npy -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis/data creating build/bdist.linux-x86_64/wheel/MDAnalysis/analysis/hbonds copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/hbonds/__init__.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis/hbonds copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/hbonds/hbond_autocorrel.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis/hbonds copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/nucleicacids.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/align.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/psa.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/lineardensity.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/helix_analysis.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/distances.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis creating build/bdist.linux-x86_64/wheel/MDAnalysis/analysis/hydrogenbonds copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/hydrogenbonds/wbridge_analysis.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis/hydrogenbonds copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/hydrogenbonds/hbond_analysis.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis/hydrogenbonds copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/hydrogenbonds/__init__.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis/hydrogenbonds copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/hydrogenbonds/hbond_autocorrel.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis/hydrogenbonds copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/gnm.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/__init__.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/bat.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/rdf.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/base.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis creating build/bdist.linux-x86_64/wheel/MDAnalysis/analysis/legacy copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/legacy/x3dna.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis/legacy copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/legacy/__init__.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis/legacy copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/dielectric.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/results.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/msd.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/nuclinfo.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/polymer.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/density.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/diffusionmap.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis creating build/bdist.linux-x86_64/wheel/MDAnalysis/analysis/hole2 copying build/lib.linux-x86_64-cpython-313/MDAnalysis/analysis/hole2/__init__.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/analysis/hole2 creating build/bdist.linux-x86_64/wheel/MDAnalysis/topology copying build/lib.linux-x86_64-cpython-313/MDAnalysis/topology/PQRParser.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/topology copying build/lib.linux-x86_64-cpython-313/MDAnalysis/topology/ParmEdParser.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/topology creating build/bdist.linux-x86_64/wheel/MDAnalysis/topology/tpr copying build/lib.linux-x86_64-cpython-313/MDAnalysis/topology/tpr/setting.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/topology/tpr copying build/lib.linux-x86_64-cpython-313/MDAnalysis/topology/tpr/obj.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/topology/tpr copying build/lib.linux-x86_64-cpython-313/MDAnalysis/topology/tpr/__init__.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/topology/tpr copying build/lib.linux-x86_64-cpython-313/MDAnalysis/topology/tpr/utils.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/topology/tpr copying build/lib.linux-x86_64-cpython-313/MDAnalysis/topology/GMSParser.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/topology copying build/lib.linux-x86_64-cpython-313/MDAnalysis/topology/MOL2Parser.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/topology copying build/lib.linux-x86_64-cpython-313/MDAnalysis/topology/CRDParser.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/topology copying build/lib.linux-x86_64-cpython-313/MDAnalysis/topology/GSDParser.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/topology copying build/lib.linux-x86_64-cpython-313/MDAnalysis/topology/LAMMPSParser.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/topology copying build/lib.linux-x86_64-cpython-313/MDAnalysis/topology/MinimalParser.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/topology copying build/lib.linux-x86_64-cpython-313/MDAnalysis/topology/FHIAIMSParser.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/topology copying build/lib.linux-x86_64-cpython-313/MDAnalysis/topology/ExtendedPDBParser.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/topology copying build/lib.linux-x86_64-cpython-313/MDAnalysis/topology/HoomdXMLParser.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/topology copying build/lib.linux-x86_64-cpython-313/MDAnalysis/topology/XYZParser.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/topology copying build/lib.linux-x86_64-cpython-313/MDAnalysis/topology/guessers.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/topology copying build/lib.linux-x86_64-cpython-313/MDAnalysis/topology/PDBParser.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/topology copying build/lib.linux-x86_64-cpython-313/MDAnalysis/topology/PSFParser.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/topology copying build/lib.linux-x86_64-cpython-313/MDAnalysis/topology/TOPParser.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/topology copying build/lib.linux-x86_64-cpython-313/MDAnalysis/topology/__init__.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/topology copying build/lib.linux-x86_64-cpython-313/MDAnalysis/topology/core.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/topology copying build/lib.linux-x86_64-cpython-313/MDAnalysis/topology/GROParser.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/topology copying build/lib.linux-x86_64-cpython-313/MDAnalysis/topology/TPRParser.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/topology copying build/lib.linux-x86_64-cpython-313/MDAnalysis/topology/ITPParser.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/topology copying build/lib.linux-x86_64-cpython-313/MDAnalysis/topology/base.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/topology copying build/lib.linux-x86_64-cpython-313/MDAnalysis/topology/TXYZParser.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/topology copying build/lib.linux-x86_64-cpython-313/MDAnalysis/topology/PDBQTParser.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/topology copying build/lib.linux-x86_64-cpython-313/MDAnalysis/topology/DMSParser.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/topology copying build/lib.linux-x86_64-cpython-313/MDAnalysis/topology/MMTFParser.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/topology copying build/lib.linux-x86_64-cpython-313/MDAnalysis/topology/tables.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/topology copying build/lib.linux-x86_64-cpython-313/MDAnalysis/topology/DLPolyParser.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/topology copying build/lib.linux-x86_64-cpython-313/MDAnalysis/units.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis copying build/lib.linux-x86_64-cpython-313/MDAnalysis/due.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis copying build/lib.linux-x86_64-cpython-313/MDAnalysis/__init__.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis creating build/bdist.linux-x86_64/wheel/MDAnalysis/converters copying build/lib.linux-x86_64-cpython-313/MDAnalysis/converters/ParmEdParser.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/converters copying build/lib.linux-x86_64-cpython-313/MDAnalysis/converters/RDKitParser.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/converters copying build/lib.linux-x86_64-cpython-313/MDAnalysis/converters/ParmEd.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/converters copying build/lib.linux-x86_64-cpython-313/MDAnalysis/converters/RDKit.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/converters copying build/lib.linux-x86_64-cpython-313/MDAnalysis/converters/OpenMMParser.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/converters copying build/lib.linux-x86_64-cpython-313/MDAnalysis/converters/OpenMM.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/converters copying build/lib.linux-x86_64-cpython-313/MDAnalysis/converters/__init__.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/converters copying build/lib.linux-x86_64-cpython-313/MDAnalysis/converters/RDKitInferring.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/converters copying build/lib.linux-x86_64-cpython-313/MDAnalysis/converters/base.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/converters copying build/lib.linux-x86_64-cpython-313/MDAnalysis/authors.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis creating build/bdist.linux-x86_64/wheel/MDAnalysis/coordinates copying build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates/TNG.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/coordinates copying build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates/MMTF.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/coordinates copying build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates/ParmEd.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/coordinates copying build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates/chemfiles.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/coordinates copying build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates/XDR.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/coordinates copying build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates/timestep.pxd -> build/bdist.linux-x86_64/wheel/./MDAnalysis/coordinates copying build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates/H5MD.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/coordinates copying build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates/TPR.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/coordinates copying build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates/TRZ.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/coordinates copying build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates/GSD.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/coordinates copying build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates/chain.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/coordinates copying build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates/MOL2.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/coordinates copying build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates/memory.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/coordinates copying build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates/LAMMPS.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/coordinates copying build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates/TRJ.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/coordinates copying build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates/DMS.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/coordinates copying build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates/CRD.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/coordinates copying build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates/timestep.cpython-313-x86_64-linux-gnu.so -> build/bdist.linux-x86_64/wheel/./MDAnalysis/coordinates copying build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates/NAMDBIN.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/coordinates copying build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates/FHIAIMS.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/coordinates copying build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates/IMD.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/coordinates copying build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates/XYZ.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/coordinates copying build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates/timestep.cpp -> build/bdist.linux-x86_64/wheel/./MDAnalysis/coordinates copying build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates/XTC.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/coordinates copying build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates/INPCRD.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/coordinates copying build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates/__init__.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/coordinates copying build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates/core.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/coordinates copying build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates/TRC.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/coordinates copying build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates/GMS.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/coordinates copying build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates/base.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/coordinates copying build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates/null.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/coordinates copying build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates/TXYZ.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/coordinates copying build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates/TRR.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/coordinates copying build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates/DLPoly.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/coordinates copying build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates/PDBQT.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/coordinates copying build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates/PQR.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/coordinates copying build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates/GRO.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/coordinates copying build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates/PDB.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/coordinates copying build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates/timestep.pyx -> build/bdist.linux-x86_64/wheel/./MDAnalysis/coordinates copying build/lib.linux-x86_64-cpython-313/MDAnalysis/coordinates/DCD.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/coordinates copying build/lib.linux-x86_64-cpython-313/MDAnalysis/version.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis copying build/lib.linux-x86_64-cpython-313/MDAnalysis/exceptions.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis creating build/bdist.linux-x86_64/wheel/MDAnalysis/lib copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/_cutil.pxd -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib creating build/bdist.linux-x86_64/wheel/MDAnalysis/lib/include copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/include/__init__.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib/include copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/include/calc_distances.h -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib/include copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/nsgrid.cpp -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib creating build/bdist.linux-x86_64/wheel/MDAnalysis/lib/src creating build/bdist.linux-x86_64/wheel/MDAnalysis/lib/src/transformations copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/src/transformations/AUTHOR -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib/src/transformations copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/src/transformations/LICENCE -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib/src/transformations copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/src/transformations/__init__.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib/src/transformations copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/src/transformations/transformations.c -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib/src/transformations copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/qcprot.pyx -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/_cutil.cpp -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/_augment.cpython-313-x86_64-linux-gnu.so -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/qcprot.c -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/nsgrid.cpython-313-x86_64-linux-gnu.so -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib creating build/bdist.linux-x86_64/wheel/MDAnalysis/lib/formats creating build/bdist.linux-x86_64/wheel/MDAnalysis/lib/formats/include copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats/include/fastio.h -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib/formats/include copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats/include/xdrfile_trr.h -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib/formats/include copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats/include/readdcd.h -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib/formats/include copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats/include/xtc_seek.h -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib/formats/include copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats/include/trr_seek.h -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib/formats/include copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats/include/__init__.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib/formats/include copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats/include/xdrfile.h -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib/formats/include copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats/include/xdrfile_xtc.h -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib/formats/include copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats/include/endianswap.h -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib/formats/include creating build/bdist.linux-x86_64/wheel/MDAnalysis/lib/formats/src copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats/src/xdrfile_trr.c -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib/formats/src copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats/src/xdrfile.c -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib/formats/src copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats/src/xtc_seek.c -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib/formats/src copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats/src/__init__.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib/formats/src copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats/src/xdrfile_xtc.c -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib/formats/src copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats/src/trr_seek.c -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib/formats/src copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats/libmdaxdr.pxd -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib/formats copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats/cython_util.pyx -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib/formats copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats/cython_util.c -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib/formats copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats/libdcd.cpython-313-x86_64-linux-gnu.so -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib/formats copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats/__init__.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib/formats copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats/libdcd.pyx -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib/formats copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats/libmdaxdr.c -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib/formats copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats/libmdaxdr.cpython-313-x86_64-linux-gnu.so -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib/formats copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats/cython_util.pxd -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib/formats copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats/libmdaxdr.pyx -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib/formats copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats/libdcd.c -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib/formats copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats/cython_util.cpython-313-x86_64-linux-gnu.so -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib/formats copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/formats/libdcd.pxd -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib/formats copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/c_distances.pyx -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/c_distances_openmp.cpython-313-x86_64-linux-gnu.so -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/c_distances.pxd -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/qcprot.cpython-313-x86_64-linux-gnu.so -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/c_distances.cpython-313-x86_64-linux-gnu.so -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/distances.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/util.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/NeighborSearch.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/_augment.cpp -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/__init__.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/mdamath.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/pkdtree.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/_transformations.cpython-313-x86_64-linux-gnu.so -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/_cutil.pyx -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/correlations.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib creating build/bdist.linux-x86_64/wheel/MDAnalysis/lib/libmdanalysis copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/libmdanalysis/__init__.pxd -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib/libmdanalysis copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/libmdanalysis/__init__.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib/libmdanalysis copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/_cutil.cpython-313-x86_64-linux-gnu.so -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/_distopia.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/c_distances_openmp.pyx -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/c_distances.c -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/transformations.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/picklable_file_io.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/log.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/_augment.pyx -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/c_distances_openmp.c -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib copying build/lib.linux-x86_64-cpython-313/MDAnalysis/lib/nsgrid.pyx -> build/bdist.linux-x86_64/wheel/./MDAnalysis/lib creating build/bdist.linux-x86_64/wheel/MDAnalysis/tests copying build/lib.linux-x86_64-cpython-313/MDAnalysis/tests/__init__.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/tests copying build/lib.linux-x86_64-cpython-313/MDAnalysis/tests/datafiles.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/tests creating build/bdist.linux-x86_64/wheel/MDAnalysis/visualization copying build/lib.linux-x86_64-cpython-313/MDAnalysis/visualization/streamlines_3D.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/visualization copying build/lib.linux-x86_64-cpython-313/MDAnalysis/visualization/__init__.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/visualization copying build/lib.linux-x86_64-cpython-313/MDAnalysis/visualization/streamlines.py -> build/bdist.linux-x86_64/wheel/./MDAnalysis/visualization creating build/bdist.linux-x86_64/wheel/doc creating build/bdist.linux-x86_64/wheel/doc/sphinx copying build/lib.linux-x86_64-cpython-313/doc/sphinx/Makefile -> build/bdist.linux-x86_64/wheel/./doc/sphinx creating build/bdist.linux-x86_64/wheel/doc/sphinx/source copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/references.bib -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/conf.py -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source creating build/bdist.linux-x86_64/wheel/doc/sphinx/source/images copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/images/msd_demo_plot.png -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/images copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/images/RSMD_plot.png -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/images copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/images/janin_demo_plot.png -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/images copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/images/rama_demo_plot.png -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/images copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/images/AnalysisBase_parallel.png -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/images copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/images/rama_ref_plot.png -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/images copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/images/parallelization_time.png -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/images copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/images/janin_ref_plot.png -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/images copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/index.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source creating build/bdist.linux-x86_64/wheel/doc/sphinx/source/documentation_pages creating build/bdist.linux-x86_64/wheel/doc/sphinx/source/documentation_pages/core copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/core/universe.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/core copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/core/topology.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/core copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/core/groups.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/core copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/core/accessors.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/core copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/core/init.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/core copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/core/selection.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/core copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/core/topologyobjects.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/core copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/core/topologyattrs.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/core copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/converters.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/version.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/selections.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages creating build/bdist.linux-x86_64/wheel/doc/sphinx/source/documentation_pages/selections copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/selections/charmm.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/selections copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/selections/gromacs.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/selections copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/selections/jmol.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/selections copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/selections/base.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/selections copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/selections/vmd.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/selections copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/selections/pymol.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/selections copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/visualization_modules.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages creating build/bdist.linux-x86_64/wheel/doc/sphinx/source/documentation_pages/auxiliary copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/auxiliary/EDR.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/auxiliary copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/auxiliary/core.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/auxiliary copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/auxiliary/init.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/auxiliary copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/auxiliary/XVG.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/auxiliary copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/auxiliary/base.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/auxiliary copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/units.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages creating build/bdist.linux-x86_64/wheel/doc/sphinx/source/documentation_pages/guesser_modules copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/guesser_modules/default_guesser.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/guesser_modules copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/guesser_modules/tables.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/guesser_modules copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/guesser_modules/init.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/guesser_modules copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/guesser_modules/base.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/guesser_modules copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis_modules.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages creating build/bdist.linux-x86_64/wheel/doc/sphinx/source/documentation_pages/transformations copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/transformations/wrap.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/transformations copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/transformations/positionaveraging.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/transformations copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/transformations/fit.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/transformations copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/transformations/boxdimensions.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/transformations copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/transformations/base.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/transformations copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/transformations/translate.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/transformations copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/transformations/rotate.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/transformations copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/transformations/nojump.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/transformations copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/core_modules.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages creating build/bdist.linux-x86_64/wheel/doc/sphinx/source/documentation_pages/analysis copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/dssp.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/analysis copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/lineardensity.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/analysis copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/nuclinfo.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/analysis copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/psa.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/analysis copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/density.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/analysis creating build/bdist.linux-x86_64/wheel/doc/sphinx/source/documentation_pages/analysis/encore copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/encore/utils.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/analysis/encore copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/encore/clustering.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/analysis/encore copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/encore/bootstrap.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/analysis/encore copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/encore/confdistmatrix.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/analysis/encore copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/encore/similarity.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/analysis/encore copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/encore/covariance.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/analysis/encore copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/encore/dimensionality_reduction.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/analysis/encore copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/atomicdistances.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/analysis copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/dielectric.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/analysis copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/polymer.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/analysis copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/results.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/analysis copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/dihedrals.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/analysis copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/nucleicacids.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/analysis copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/hydrogenbonds.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/analysis copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/align.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/analysis copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/backends.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/analysis copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/encore.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/analysis copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/contacts.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/analysis copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/helix_analysis.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/analysis copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/leaflet.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/analysis copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/distances.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/analysis copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/legacy_modules.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/analysis copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/msd.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/analysis copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/data.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/analysis copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/gnm.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/analysis copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/hbond_autocorrel_deprecated.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/analysis copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/parallelization.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/analysis creating build/bdist.linux-x86_64/wheel/doc/sphinx/source/documentation_pages/analysis/legacy copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/legacy/x3dna.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/analysis/legacy copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/rdf.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/analysis copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/base.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/analysis copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/wbridge_analysis.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/analysis copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/hbond_autocorrel.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/analysis copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/hole2.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/analysis copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/bat.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/analysis copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/pca.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/analysis copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/rms.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/analysis copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/diffusionmap.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/analysis copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/analysis/waterdynamics.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/analysis copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/selections_modules.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/overview.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages creating build/bdist.linux-x86_64/wheel/doc/sphinx/source/documentation_pages/topology copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology/TPRParser.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/topology copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology/DLPolyParser.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/topology copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology/MOL2Parser.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/topology copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology/TXYZParser.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/topology copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology/PQRParser.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/topology copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology/tables.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/topology copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology/CRDParser.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/topology copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology/guessers.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/topology copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology/XYZParser.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/topology copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology/PDBQTParser.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/topology copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology/tpr_util.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/topology copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology/core.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/topology copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology/init.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/topology copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology/ExtendedPDBParser.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/topology copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology/TOPParser.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/topology copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology/LAMMPSParser.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/topology copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology/HoomdXMLParser.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/topology copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology/PDBParser.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/topology copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology/GROParser.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/topology copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology/DMSParser.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/topology copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology/GMSParser.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/topology copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology/PSFParser.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/topology copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology/MMTFParser.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/topology copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology/FHIAIMSParser.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/topology copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology/GSDParser.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/topology copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology/base.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/topology copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology/MinimalParser.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/topology copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology/ITPParser.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/topology creating build/bdist.linux-x86_64/wheel/doc/sphinx/source/documentation_pages/converters copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/converters/OpenMM.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/converters copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/converters/ParmEd.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/converters copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/converters/base.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/converters copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/converters/RDKit.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/converters copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/topology_modules.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/guesser_modules.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates_modules.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages creating build/bdist.linux-x86_64/wheel/doc/sphinx/source/documentation_pages/coordinates copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates/GSD.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/coordinates copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates/CRD.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/coordinates copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates/chain.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/coordinates copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates/DCD.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/coordinates copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates/GMS.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/coordinates copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates/memory.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/coordinates copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates/XYZ.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/coordinates copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates/TXYZ.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/coordinates copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates/XDR.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/coordinates copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates/PQR.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/coordinates copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates/pickle_readers.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/coordinates copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates/core.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/coordinates copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates/init.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/coordinates copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates/PDB.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/coordinates copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates/TRC.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/coordinates copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates/TPR.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/coordinates copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates/DLPoly.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/coordinates copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates/FHIAIMS.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/coordinates copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates/INPCRD.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/coordinates copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates/H5MD.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/coordinates copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates/timestep.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/coordinates copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates/base.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/coordinates copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates/PDBQT.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/coordinates copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates/TRJ.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/coordinates copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates/TNG.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/coordinates copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates/MOL2.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/coordinates copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates/GRO.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/coordinates copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates/IMD.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/coordinates copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates/null.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/coordinates copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates/DMS.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/coordinates copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates/MMTF.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/coordinates copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates/LAMMPS.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/coordinates copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates/chemfiles.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/coordinates copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates/TRR.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/coordinates copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates/NAMDBIN.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/coordinates copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates/TRZ.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/coordinates copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/coordinates/XTC.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/coordinates copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/exceptions.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/trajectory_transformations.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/auxiliary_modules.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/references.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/lib_modules.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages creating build/bdist.linux-x86_64/wheel/doc/sphinx/source/documentation_pages/lib copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/lib/log.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/lib copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/lib/mdamath.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/lib copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/lib/qcprot.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/lib creating build/bdist.linux-x86_64/wheel/doc/sphinx/source/documentation_pages/lib/formats copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/lib/formats/libmdaxdr.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/lib/formats copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/lib/formats/libdcd.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/lib/formats copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/lib/c_distances.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/lib copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/lib/picklable_file_io.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/lib copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/lib/pkdtree.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/lib copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/lib/NeighborSearch.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/lib copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/lib/correlations.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/lib copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/lib/transformations.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/lib copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/lib/distances.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/lib copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/lib/util.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/lib copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/lib/nsgrid.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/lib copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/lib/c_distances_openmp.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/lib creating build/bdist.linux-x86_64/wheel/doc/sphinx/source/documentation_pages/visualization copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/visualization/streamlines_3D.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/visualization copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/visualization/streamlines.rst -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/visualization copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/visualization/testing_streamline.png -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/visualization copying build/lib.linux-x86_64-cpython-313/doc/sphinx/source/documentation_pages/visualization/test_streamplot_3D.png -> build/bdist.linux-x86_64/wheel/./doc/sphinx/source/documentation_pages/visualization copying build/lib.linux-x86_64-cpython-313/doc/README -> build/bdist.linux-x86_64/wheel/./doc running install_egg_info Copying MDAnalysis.egg-info to build/bdist.linux-x86_64/wheel/./MDAnalysis-2.10.0.egg-info running install_scripts creating build/bdist.linux-x86_64/wheel/mdanalysis-2.10.0.dist-info/WHEEL creating '/build/reproducible-path/mdanalysis-2.10.0/.pybuild/cpython3_3.13_mdanalysis/.tmp-6ftnx20p/mdanalysis-2.10.0-cp313-cp313-linux_x86_64.whl' and adding 'build/bdist.linux-x86_64/wheel' to it adding 'MDAnalysis/__init__.py' adding 'MDAnalysis/authors.py' adding 'MDAnalysis/due.py' adding 'MDAnalysis/exceptions.py' adding 'MDAnalysis/units.py' adding 'MDAnalysis/version.py' adding 'MDAnalysis/analysis/__init__.py' adding 'MDAnalysis/analysis/align.py' adding 'MDAnalysis/analysis/atomicdistances.py' adding 'MDAnalysis/analysis/backends.py' adding 'MDAnalysis/analysis/base.py' adding 'MDAnalysis/analysis/bat.py' adding 'MDAnalysis/analysis/contacts.py' adding 'MDAnalysis/analysis/density.py' adding 'MDAnalysis/analysis/dielectric.py' adding 'MDAnalysis/analysis/diffusionmap.py' adding 'MDAnalysis/analysis/dihedrals.py' adding 'MDAnalysis/analysis/distances.py' adding 'MDAnalysis/analysis/gnm.py' adding 'MDAnalysis/analysis/helix_analysis.py' adding 'MDAnalysis/analysis/leaflet.py' adding 'MDAnalysis/analysis/lineardensity.py' adding 'MDAnalysis/analysis/msd.py' adding 'MDAnalysis/analysis/nucleicacids.py' adding 'MDAnalysis/analysis/nuclinfo.py' adding 'MDAnalysis/analysis/pca.py' adding 'MDAnalysis/analysis/polymer.py' adding 'MDAnalysis/analysis/psa.py' adding 'MDAnalysis/analysis/rdf.py' adding 'MDAnalysis/analysis/results.py' adding 'MDAnalysis/analysis/rms.py' adding 'MDAnalysis/analysis/waterdynamics.py' adding 'MDAnalysis/analysis/data/__init__.py' adding 'MDAnalysis/analysis/data/filenames.py' adding 'MDAnalysis/analysis/data/janin_ref_data.npy' adding 'MDAnalysis/analysis/data/rama_ref_data.npy' adding 'MDAnalysis/analysis/dssp/__init__.py' adding 'MDAnalysis/analysis/dssp/dssp.py' adding 'MDAnalysis/analysis/dssp/pydssp_numpy.py' adding 'MDAnalysis/analysis/encore/__init__.py' adding 'MDAnalysis/analysis/encore/bootstrap.py' adding 'MDAnalysis/analysis/encore/confdistmatrix.py' adding 'MDAnalysis/analysis/encore/covariance.py' adding 'MDAnalysis/analysis/encore/cutils.c' adding 'MDAnalysis/analysis/encore/cutils.cpython-313-x86_64-linux-gnu.so' adding 'MDAnalysis/analysis/encore/cutils.pyx' adding 'MDAnalysis/analysis/encore/similarity.py' adding 'MDAnalysis/analysis/encore/utils.py' adding 'MDAnalysis/analysis/encore/clustering/ClusterCollection.py' adding 'MDAnalysis/analysis/encore/clustering/ClusteringMethod.py' adding 'MDAnalysis/analysis/encore/clustering/__init__.py' adding 'MDAnalysis/analysis/encore/clustering/affinityprop.c' adding 'MDAnalysis/analysis/encore/clustering/affinityprop.cpython-313-x86_64-linux-gnu.so' adding 'MDAnalysis/analysis/encore/clustering/affinityprop.pyx' adding 'MDAnalysis/analysis/encore/clustering/cluster.py' adding 'MDAnalysis/analysis/encore/clustering/include/ap.h' adding 'MDAnalysis/analysis/encore/clustering/src/ap.c' adding 'MDAnalysis/analysis/encore/dimensionality_reduction/DimensionalityReductionMethod.py' adding 'MDAnalysis/analysis/encore/dimensionality_reduction/__init__.py' adding 'MDAnalysis/analysis/encore/dimensionality_reduction/reduce_dimensionality.py' adding 'MDAnalysis/analysis/encore/dimensionality_reduction/stochasticproxembed.c' adding 'MDAnalysis/analysis/encore/dimensionality_reduction/stochasticproxembed.cpython-313-x86_64-linux-gnu.so' adding 'MDAnalysis/analysis/encore/dimensionality_reduction/stochasticproxembed.pyx' adding 'MDAnalysis/analysis/encore/dimensionality_reduction/include/spe.h' adding 'MDAnalysis/analysis/encore/dimensionality_reduction/src/spe.c' adding 'MDAnalysis/analysis/hbonds/__init__.py' adding 'MDAnalysis/analysis/hbonds/hbond_autocorrel.py' adding 'MDAnalysis/analysis/hole2/__init__.py' adding 'MDAnalysis/analysis/hydrogenbonds/__init__.py' adding 'MDAnalysis/analysis/hydrogenbonds/hbond_analysis.py' adding 'MDAnalysis/analysis/hydrogenbonds/hbond_autocorrel.py' adding 'MDAnalysis/analysis/hydrogenbonds/wbridge_analysis.py' adding 'MDAnalysis/analysis/legacy/__init__.py' adding 'MDAnalysis/analysis/legacy/x3dna.py' adding 'MDAnalysis/auxiliary/EDR.py' adding 'MDAnalysis/auxiliary/XVG.py' adding 'MDAnalysis/auxiliary/__init__.py' adding 'MDAnalysis/auxiliary/base.py' adding 'MDAnalysis/auxiliary/core.py' adding 'MDAnalysis/converters/OpenMM.py' adding 'MDAnalysis/converters/OpenMMParser.py' adding 'MDAnalysis/converters/ParmEd.py' adding 'MDAnalysis/converters/ParmEdParser.py' adding 'MDAnalysis/converters/RDKit.py' adding 'MDAnalysis/converters/RDKitInferring.py' adding 'MDAnalysis/converters/RDKitParser.py' adding 'MDAnalysis/converters/__init__.py' adding 'MDAnalysis/converters/base.py' adding 'MDAnalysis/coordinates/CRD.py' adding 'MDAnalysis/coordinates/DCD.py' adding 'MDAnalysis/coordinates/DLPoly.py' adding 'MDAnalysis/coordinates/DMS.py' adding 'MDAnalysis/coordinates/FHIAIMS.py' adding 'MDAnalysis/coordinates/GMS.py' adding 'MDAnalysis/coordinates/GRO.py' adding 'MDAnalysis/coordinates/GSD.py' adding 'MDAnalysis/coordinates/H5MD.py' adding 'MDAnalysis/coordinates/IMD.py' adding 'MDAnalysis/coordinates/INPCRD.py' adding 'MDAnalysis/coordinates/LAMMPS.py' adding 'MDAnalysis/coordinates/MMTF.py' adding 'MDAnalysis/coordinates/MOL2.py' adding 'MDAnalysis/coordinates/NAMDBIN.py' adding 'MDAnalysis/coordinates/PDB.py' adding 'MDAnalysis/coordinates/PDBQT.py' adding 'MDAnalysis/coordinates/PQR.py' adding 'MDAnalysis/coordinates/ParmEd.py' adding 'MDAnalysis/coordinates/TNG.py' adding 'MDAnalysis/coordinates/TPR.py' adding 'MDAnalysis/coordinates/TRC.py' adding 'MDAnalysis/coordinates/TRJ.py' adding 'MDAnalysis/coordinates/TRR.py' adding 'MDAnalysis/coordinates/TRZ.py' adding 'MDAnalysis/coordinates/TXYZ.py' adding 'MDAnalysis/coordinates/XDR.py' adding 'MDAnalysis/coordinates/XTC.py' adding 'MDAnalysis/coordinates/XYZ.py' adding 'MDAnalysis/coordinates/__init__.py' adding 'MDAnalysis/coordinates/base.py' adding 'MDAnalysis/coordinates/chain.py' adding 'MDAnalysis/coordinates/chemfiles.py' adding 'MDAnalysis/coordinates/core.py' adding 'MDAnalysis/coordinates/memory.py' adding 'MDAnalysis/coordinates/null.py' adding 'MDAnalysis/coordinates/timestep.cpp' adding 'MDAnalysis/coordinates/timestep.cpython-313-x86_64-linux-gnu.so' adding 'MDAnalysis/coordinates/timestep.pxd' adding 'MDAnalysis/coordinates/timestep.pyx' adding 'MDAnalysis/core/__init__.py' adding 'MDAnalysis/core/_get_readers.py' adding 'MDAnalysis/core/accessors.py' adding 'MDAnalysis/core/groups.py' adding 'MDAnalysis/core/selection.py' adding 'MDAnalysis/core/topology.py' adding 'MDAnalysis/core/topologyattrs.py' adding 'MDAnalysis/core/topologyobjects.py' adding 'MDAnalysis/core/universe.py' adding 'MDAnalysis/guesser/__init__.py' adding 'MDAnalysis/guesser/base.py' adding 'MDAnalysis/guesser/default_guesser.py' adding 'MDAnalysis/guesser/tables.py' adding 'MDAnalysis/lib/NeighborSearch.py' adding 'MDAnalysis/lib/__init__.py' adding 'MDAnalysis/lib/_augment.cpp' adding 'MDAnalysis/lib/_augment.cpython-313-x86_64-linux-gnu.so' adding 'MDAnalysis/lib/_augment.pyx' adding 'MDAnalysis/lib/_cutil.cpp' adding 'MDAnalysis/lib/_cutil.cpython-313-x86_64-linux-gnu.so' adding 'MDAnalysis/lib/_cutil.pxd' adding 'MDAnalysis/lib/_cutil.pyx' adding 'MDAnalysis/lib/_distopia.py' adding 'MDAnalysis/lib/_transformations.cpython-313-x86_64-linux-gnu.so' adding 'MDAnalysis/lib/c_distances.c' adding 'MDAnalysis/lib/c_distances.cpython-313-x86_64-linux-gnu.so' adding 'MDAnalysis/lib/c_distances.pxd' adding 'MDAnalysis/lib/c_distances.pyx' adding 'MDAnalysis/lib/c_distances_openmp.c' adding 'MDAnalysis/lib/c_distances_openmp.cpython-313-x86_64-linux-gnu.so' adding 'MDAnalysis/lib/c_distances_openmp.pyx' adding 'MDAnalysis/lib/correlations.py' adding 'MDAnalysis/lib/distances.py' adding 'MDAnalysis/lib/log.py' adding 'MDAnalysis/lib/mdamath.py' adding 'MDAnalysis/lib/nsgrid.cpp' adding 'MDAnalysis/lib/nsgrid.cpython-313-x86_64-linux-gnu.so' adding 'MDAnalysis/lib/nsgrid.pyx' adding 'MDAnalysis/lib/picklable_file_io.py' adding 'MDAnalysis/lib/pkdtree.py' adding 'MDAnalysis/lib/qcprot.c' adding 'MDAnalysis/lib/qcprot.cpython-313-x86_64-linux-gnu.so' adding 'MDAnalysis/lib/qcprot.pyx' adding 'MDAnalysis/lib/transformations.py' adding 'MDAnalysis/lib/util.py' adding 'MDAnalysis/lib/formats/__init__.py' adding 'MDAnalysis/lib/formats/cython_util.c' adding 'MDAnalysis/lib/formats/cython_util.cpython-313-x86_64-linux-gnu.so' adding 'MDAnalysis/lib/formats/cython_util.pxd' adding 'MDAnalysis/lib/formats/cython_util.pyx' adding 'MDAnalysis/lib/formats/libdcd.c' adding 'MDAnalysis/lib/formats/libdcd.cpython-313-x86_64-linux-gnu.so' adding 'MDAnalysis/lib/formats/libdcd.pxd' adding 'MDAnalysis/lib/formats/libdcd.pyx' adding 'MDAnalysis/lib/formats/libmdaxdr.c' adding 'MDAnalysis/lib/formats/libmdaxdr.cpython-313-x86_64-linux-gnu.so' adding 'MDAnalysis/lib/formats/libmdaxdr.pxd' adding 'MDAnalysis/lib/formats/libmdaxdr.pyx' adding 'MDAnalysis/lib/formats/include/__init__.py' adding 'MDAnalysis/lib/formats/include/endianswap.h' adding 'MDAnalysis/lib/formats/include/fastio.h' adding 'MDAnalysis/lib/formats/include/readdcd.h' adding 'MDAnalysis/lib/formats/include/trr_seek.h' adding 'MDAnalysis/lib/formats/include/xdrfile.h' adding 'MDAnalysis/lib/formats/include/xdrfile_trr.h' adding 'MDAnalysis/lib/formats/include/xdrfile_xtc.h' adding 'MDAnalysis/lib/formats/include/xtc_seek.h' adding 'MDAnalysis/lib/formats/src/__init__.py' adding 'MDAnalysis/lib/formats/src/trr_seek.c' adding 'MDAnalysis/lib/formats/src/xdrfile.c' adding 'MDAnalysis/lib/formats/src/xdrfile_trr.c' adding 'MDAnalysis/lib/formats/src/xdrfile_xtc.c' adding 'MDAnalysis/lib/formats/src/xtc_seek.c' adding 'MDAnalysis/lib/include/__init__.py' adding 'MDAnalysis/lib/include/calc_distances.h' adding 'MDAnalysis/lib/libmdanalysis/__init__.pxd' adding 'MDAnalysis/lib/libmdanalysis/__init__.py' adding 'MDAnalysis/lib/src/transformations/AUTHOR' adding 'MDAnalysis/lib/src/transformations/LICENCE' adding 'MDAnalysis/lib/src/transformations/__init__.py' adding 'MDAnalysis/lib/src/transformations/transformations.c' adding 'MDAnalysis/selections/__init__.py' adding 'MDAnalysis/selections/base.py' adding 'MDAnalysis/selections/charmm.py' adding 'MDAnalysis/selections/gromacs.py' adding 'MDAnalysis/selections/jmol.py' adding 'MDAnalysis/selections/pymol.py' adding 'MDAnalysis/selections/vmd.py' adding 'MDAnalysis/tests/__init__.py' adding 'MDAnalysis/tests/datafiles.py' adding 'MDAnalysis/topology/CRDParser.py' adding 'MDAnalysis/topology/DLPolyParser.py' adding 'MDAnalysis/topology/DMSParser.py' adding 'MDAnalysis/topology/ExtendedPDBParser.py' adding 'MDAnalysis/topology/FHIAIMSParser.py' adding 'MDAnalysis/topology/GMSParser.py' adding 'MDAnalysis/topology/GROParser.py' adding 'MDAnalysis/topology/GSDParser.py' adding 'MDAnalysis/topology/HoomdXMLParser.py' adding 'MDAnalysis/topology/ITPParser.py' adding 'MDAnalysis/topology/LAMMPSParser.py' adding 'MDAnalysis/topology/MMTFParser.py' adding 'MDAnalysis/topology/MOL2Parser.py' adding 'MDAnalysis/topology/MinimalParser.py' adding 'MDAnalysis/topology/PDBParser.py' adding 'MDAnalysis/topology/PDBQTParser.py' adding 'MDAnalysis/topology/PQRParser.py' adding 'MDAnalysis/topology/PSFParser.py' adding 'MDAnalysis/topology/ParmEdParser.py' adding 'MDAnalysis/topology/TOPParser.py' adding 'MDAnalysis/topology/TPRParser.py' adding 'MDAnalysis/topology/TXYZParser.py' adding 'MDAnalysis/topology/XYZParser.py' adding 'MDAnalysis/topology/__init__.py' adding 'MDAnalysis/topology/base.py' adding 'MDAnalysis/topology/core.py' adding 'MDAnalysis/topology/guessers.py' adding 'MDAnalysis/topology/tables.py' adding 'MDAnalysis/topology/tpr/__init__.py' adding 'MDAnalysis/topology/tpr/obj.py' adding 'MDAnalysis/topology/tpr/setting.py' adding 'MDAnalysis/topology/tpr/utils.py' adding 'MDAnalysis/transformations/__init__.py' adding 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'doc/sphinx/source/documentation_pages/analysis/hbond_autocorrel.rst' adding 'doc/sphinx/source/documentation_pages/analysis/hbond_autocorrel_deprecated.rst' adding 'doc/sphinx/source/documentation_pages/analysis/helix_analysis.rst' adding 'doc/sphinx/source/documentation_pages/analysis/hole2.rst' adding 'doc/sphinx/source/documentation_pages/analysis/hydrogenbonds.rst' adding 'doc/sphinx/source/documentation_pages/analysis/leaflet.rst' adding 'doc/sphinx/source/documentation_pages/analysis/legacy_modules.rst' adding 'doc/sphinx/source/documentation_pages/analysis/lineardensity.rst' adding 'doc/sphinx/source/documentation_pages/analysis/msd.rst' adding 'doc/sphinx/source/documentation_pages/analysis/nucleicacids.rst' adding 'doc/sphinx/source/documentation_pages/analysis/nuclinfo.rst' adding 'doc/sphinx/source/documentation_pages/analysis/parallelization.rst' adding 'doc/sphinx/source/documentation_pages/analysis/pca.rst' adding 'doc/sphinx/source/documentation_pages/analysis/polymer.rst' adding 'doc/sphinx/source/documentation_pages/analysis/psa.rst' adding 'doc/sphinx/source/documentation_pages/analysis/rdf.rst' adding 'doc/sphinx/source/documentation_pages/analysis/results.rst' adding 'doc/sphinx/source/documentation_pages/analysis/rms.rst' adding 'doc/sphinx/source/documentation_pages/analysis/waterdynamics.rst' adding 'doc/sphinx/source/documentation_pages/analysis/wbridge_analysis.rst' adding 'doc/sphinx/source/documentation_pages/analysis/encore/bootstrap.rst' adding 'doc/sphinx/source/documentation_pages/analysis/encore/clustering.rst' adding 'doc/sphinx/source/documentation_pages/analysis/encore/confdistmatrix.rst' adding 'doc/sphinx/source/documentation_pages/analysis/encore/covariance.rst' adding 'doc/sphinx/source/documentation_pages/analysis/encore/dimensionality_reduction.rst' adding 'doc/sphinx/source/documentation_pages/analysis/encore/similarity.rst' adding 'doc/sphinx/source/documentation_pages/analysis/encore/utils.rst' adding 'doc/sphinx/source/documentation_pages/analysis/legacy/x3dna.rst' adding 'doc/sphinx/source/documentation_pages/auxiliary/EDR.rst' adding 'doc/sphinx/source/documentation_pages/auxiliary/XVG.rst' adding 'doc/sphinx/source/documentation_pages/auxiliary/base.rst' adding 'doc/sphinx/source/documentation_pages/auxiliary/core.rst' adding 'doc/sphinx/source/documentation_pages/auxiliary/init.rst' adding 'doc/sphinx/source/documentation_pages/converters/OpenMM.rst' adding 'doc/sphinx/source/documentation_pages/converters/ParmEd.rst' adding 'doc/sphinx/source/documentation_pages/converters/RDKit.rst' adding 'doc/sphinx/source/documentation_pages/converters/base.rst' adding 'doc/sphinx/source/documentation_pages/coordinates/CRD.rst' adding 'doc/sphinx/source/documentation_pages/coordinates/DCD.rst' adding 'doc/sphinx/source/documentation_pages/coordinates/DLPoly.rst' adding 'doc/sphinx/source/documentation_pages/coordinates/DMS.rst' adding 'doc/sphinx/source/documentation_pages/coordinates/FHIAIMS.rst' adding 'doc/sphinx/source/documentation_pages/coordinates/GMS.rst' adding 'doc/sphinx/source/documentation_pages/coordinates/GRO.rst' adding 'doc/sphinx/source/documentation_pages/coordinates/GSD.rst' adding 'doc/sphinx/source/documentation_pages/coordinates/H5MD.rst' adding 'doc/sphinx/source/documentation_pages/coordinates/IMD.rst' adding 'doc/sphinx/source/documentation_pages/coordinates/INPCRD.rst' adding 'doc/sphinx/source/documentation_pages/coordinates/LAMMPS.rst' adding 'doc/sphinx/source/documentation_pages/coordinates/MMTF.rst' adding 'doc/sphinx/source/documentation_pages/coordinates/MOL2.rst' adding 'doc/sphinx/source/documentation_pages/coordinates/NAMDBIN.rst' adding 'doc/sphinx/source/documentation_pages/coordinates/PDB.rst' adding 'doc/sphinx/source/documentation_pages/coordinates/PDBQT.rst' adding 'doc/sphinx/source/documentation_pages/coordinates/PQR.rst' adding 'doc/sphinx/source/documentation_pages/coordinates/TNG.rst' adding 'doc/sphinx/source/documentation_pages/coordinates/TPR.rst' adding 'doc/sphinx/source/documentation_pages/coordinates/TRC.rst' adding 'doc/sphinx/source/documentation_pages/coordinates/TRJ.rst' adding 'doc/sphinx/source/documentation_pages/coordinates/TRR.rst' adding 'doc/sphinx/source/documentation_pages/coordinates/TRZ.rst' adding 'doc/sphinx/source/documentation_pages/coordinates/TXYZ.rst' adding 'doc/sphinx/source/documentation_pages/coordinates/XDR.rst' adding 'doc/sphinx/source/documentation_pages/coordinates/XTC.rst' adding 'doc/sphinx/source/documentation_pages/coordinates/XYZ.rst' adding 'doc/sphinx/source/documentation_pages/coordinates/base.rst' adding 'doc/sphinx/source/documentation_pages/coordinates/chain.rst' adding 'doc/sphinx/source/documentation_pages/coordinates/chemfiles.rst' adding 'doc/sphinx/source/documentation_pages/coordinates/core.rst' adding 'doc/sphinx/source/documentation_pages/coordinates/init.rst' adding 'doc/sphinx/source/documentation_pages/coordinates/memory.rst' adding 'doc/sphinx/source/documentation_pages/coordinates/null.rst' adding 'doc/sphinx/source/documentation_pages/coordinates/pickle_readers.rst' adding 'doc/sphinx/source/documentation_pages/coordinates/timestep.rst' adding 'doc/sphinx/source/documentation_pages/core/accessors.rst' adding 'doc/sphinx/source/documentation_pages/core/groups.rst' adding 'doc/sphinx/source/documentation_pages/core/init.rst' adding 'doc/sphinx/source/documentation_pages/core/selection.rst' adding 'doc/sphinx/source/documentation_pages/core/topology.rst' adding 'doc/sphinx/source/documentation_pages/core/topologyattrs.rst' adding 'doc/sphinx/source/documentation_pages/core/topologyobjects.rst' adding 'doc/sphinx/source/documentation_pages/core/universe.rst' adding 'doc/sphinx/source/documentation_pages/guesser_modules/base.rst' adding 'doc/sphinx/source/documentation_pages/guesser_modules/default_guesser.rst' adding 'doc/sphinx/source/documentation_pages/guesser_modules/init.rst' adding 'doc/sphinx/source/documentation_pages/guesser_modules/tables.rst' adding 'doc/sphinx/source/documentation_pages/lib/NeighborSearch.rst' adding 'doc/sphinx/source/documentation_pages/lib/c_distances.rst' adding 'doc/sphinx/source/documentation_pages/lib/c_distances_openmp.rst' adding 'doc/sphinx/source/documentation_pages/lib/correlations.rst' adding 'doc/sphinx/source/documentation_pages/lib/distances.rst' adding 'doc/sphinx/source/documentation_pages/lib/log.rst' adding 'doc/sphinx/source/documentation_pages/lib/mdamath.rst' adding 'doc/sphinx/source/documentation_pages/lib/nsgrid.rst' adding 'doc/sphinx/source/documentation_pages/lib/picklable_file_io.rst' adding 'doc/sphinx/source/documentation_pages/lib/pkdtree.rst' adding 'doc/sphinx/source/documentation_pages/lib/qcprot.rst' adding 'doc/sphinx/source/documentation_pages/lib/transformations.rst' adding 'doc/sphinx/source/documentation_pages/lib/util.rst' adding 'doc/sphinx/source/documentation_pages/lib/formats/libdcd.rst' adding 'doc/sphinx/source/documentation_pages/lib/formats/libmdaxdr.rst' adding 'doc/sphinx/source/documentation_pages/selections/base.rst' adding 'doc/sphinx/source/documentation_pages/selections/charmm.rst' adding 'doc/sphinx/source/documentation_pages/selections/gromacs.rst' adding 'doc/sphinx/source/documentation_pages/selections/jmol.rst' adding 'doc/sphinx/source/documentation_pages/selections/pymol.rst' adding 'doc/sphinx/source/documentation_pages/selections/vmd.rst' adding 'doc/sphinx/source/documentation_pages/topology/CRDParser.rst' adding 'doc/sphinx/source/documentation_pages/topology/DLPolyParser.rst' adding 'doc/sphinx/source/documentation_pages/topology/DMSParser.rst' adding 'doc/sphinx/source/documentation_pages/topology/ExtendedPDBParser.rst' adding 'doc/sphinx/source/documentation_pages/topology/FHIAIMSParser.rst' adding 'doc/sphinx/source/documentation_pages/topology/GMSParser.rst' adding 'doc/sphinx/source/documentation_pages/topology/GROParser.rst' adding 'doc/sphinx/source/documentation_pages/topology/GSDParser.rst' adding 'doc/sphinx/source/documentation_pages/topology/HoomdXMLParser.rst' adding 'doc/sphinx/source/documentation_pages/topology/ITPParser.rst' adding 'doc/sphinx/source/documentation_pages/topology/LAMMPSParser.rst' adding 'doc/sphinx/source/documentation_pages/topology/MMTFParser.rst' adding 'doc/sphinx/source/documentation_pages/topology/MOL2Parser.rst' adding 'doc/sphinx/source/documentation_pages/topology/MinimalParser.rst' adding 'doc/sphinx/source/documentation_pages/topology/PDBParser.rst' adding 'doc/sphinx/source/documentation_pages/topology/PDBQTParser.rst' adding 'doc/sphinx/source/documentation_pages/topology/PQRParser.rst' adding 'doc/sphinx/source/documentation_pages/topology/PSFParser.rst' adding 'doc/sphinx/source/documentation_pages/topology/TOPParser.rst' adding 'doc/sphinx/source/documentation_pages/topology/TPRParser.rst' adding 'doc/sphinx/source/documentation_pages/topology/TXYZParser.rst' adding 'doc/sphinx/source/documentation_pages/topology/XYZParser.rst' adding 'doc/sphinx/source/documentation_pages/topology/base.rst' adding 'doc/sphinx/source/documentation_pages/topology/core.rst' adding 'doc/sphinx/source/documentation_pages/topology/guessers.rst' adding 'doc/sphinx/source/documentation_pages/topology/init.rst' adding 'doc/sphinx/source/documentation_pages/topology/tables.rst' adding 'doc/sphinx/source/documentation_pages/topology/tpr_util.rst' adding 'doc/sphinx/source/documentation_pages/transformations/base.rst' adding 'doc/sphinx/source/documentation_pages/transformations/boxdimensions.rst' adding 'doc/sphinx/source/documentation_pages/transformations/fit.rst' adding 'doc/sphinx/source/documentation_pages/transformations/nojump.rst' adding 'doc/sphinx/source/documentation_pages/transformations/positionaveraging.rst' adding 'doc/sphinx/source/documentation_pages/transformations/rotate.rst' adding 'doc/sphinx/source/documentation_pages/transformations/translate.rst' adding 'doc/sphinx/source/documentation_pages/transformations/wrap.rst' adding 'doc/sphinx/source/documentation_pages/visualization/streamlines.rst' adding 'doc/sphinx/source/documentation_pages/visualization/streamlines_3D.rst' adding 'doc/sphinx/source/documentation_pages/visualization/test_streamplot_3D.png' adding 'doc/sphinx/source/documentation_pages/visualization/testing_streamline.png' adding 'doc/sphinx/source/images/AnalysisBase_parallel.png' adding 'doc/sphinx/source/images/RSMD_plot.png' adding 'doc/sphinx/source/images/janin_demo_plot.png' adding 'doc/sphinx/source/images/janin_ref_plot.png' adding 'doc/sphinx/source/images/msd_demo_plot.png' adding 'doc/sphinx/source/images/parallelization_time.png' adding 'doc/sphinx/source/images/rama_demo_plot.png' adding 'doc/sphinx/source/images/rama_ref_plot.png' adding 'mdanalysis-2.10.0.dist-info/licenses/AUTHORS' adding 'mdanalysis-2.10.0.dist-info/licenses/LICENSE' adding 'mdanalysis-2.10.0.dist-info/METADATA' adding 'mdanalysis-2.10.0.dist-info/WHEEL' adding 'mdanalysis-2.10.0.dist-info/top_level.txt' adding 'mdanalysis-2.10.0.dist-info/RECORD' removing build/bdist.linux-x86_64/wheel Successfully built mdanalysis-2.10.0-cp313-cp313-linux_x86_64.whl I: pybuild plugin_pyproject:144: Unpacking wheel built for python3.13 with "installer" module debian/rules execute_after_dh_auto_build-indep make[1]: Entering directory '/build/reproducible-path/mdanalysis-2.10.0' PYTHONPATH=/build/reproducible-path/mdanalysis-2.10.0/.pybuild/cpython3_3.13_mdanalysis/build make html -C package/doc/sphinx/ BUILDDIR=/build/reproducible-path/mdanalysis-2.10.0/.pybuild # HTML generator make[2]: Entering directory '/build/reproducible-path/mdanalysis-2.10.0/package/doc/sphinx' sphinx-build -v -b html source /build/reproducible-path/mdanalysis-2.10.0/.pybuild/html Running Sphinx v8.2.3 loading translations [en]... locale_dir /build/reproducible-path/mdanalysis-2.10.0/package/doc/sphinx/source/locales/en/LC_MESSAGES does not exist locale_dir /build/reproducible-path/mdanalysis-2.10.0/package/doc/sphinx/source/locales/en/LC_MESSAGES does not exist done making output directory... done Converting `source_suffix = '.rst'` to `source_suffix = {'.rst': 'restructuredtext'}`. checking bibtex cache... out of date parsing bibtex file /build/reproducible-path/mdanalysis-2.10.0/package/doc/sphinx/source/references.bib... parsed 69 entries locale_dir /build/reproducible-path/mdanalysis-2.10.0/package/doc/sphinx/source/locales/en/LC_MESSAGES does not exist loading intersphinx inventory 'h5py' from /usr/share/doc/python-h5py-doc/html/objects.inv ... loading intersphinx inventory 'python' from /usr/share/doc/python3/html/objects.inv ... loading intersphinx inventory 'scipy' from /usr/share/doc/python-scipy-doc/html/objects.inv ... loading intersphinx inventory 'gsd' from /usr/share/doc/python-gsd-doc/html/objects.inv ... loading intersphinx inventory 'maplotlib' from /usr/share/doc/python-matplotlib-doc/html/objects.inv ... loading intersphinx inventory 'pmda' from https://mdanalysis.org/pmda/objects.inv ... loading intersphinx inventory 'griddataformats' from https://mdanalysis.org/GridDataFormats/objects.inv ... loading intersphinx inventory 'networkx' from https://networkx.org/documentation/stable/objects.inv ... loading intersphinx inventory 'numpy' from /usr/share/doc/python-numpy/html/objects.inv ... loading intersphinx inventory 'parmed' from https://parmed.github.io/ParmEd/html/objects.inv ... loading intersphinx inventory 'waterdynamics' from https://www.mdanalysis.org/waterdynamics/objects.inv ... loading intersphinx inventory 'rdkit' from 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WARNING: failed to reach any of the inventories with the following issues: intersphinx inventory 'https://parmed.github.io/ParmEd/html/objects.inv' not fetchable due to : HTTPSConnectionPool(host='parmed.github.io', port=443): Max retries exceeded with url: /ParmEd/html/objects.inv (Caused by ProxyError('Unable to connect to proxy', NewConnectionError(': Failed to establish a new connection: [Errno 111] Connection refused'))) WARNING: failed to reach any of the inventories with the following issues: intersphinx inventory 'https://networkx.org/documentation/stable/objects.inv' not fetchable due to : HTTPSConnectionPool(host='networkx.org', port=443): Max retries exceeded with url: /documentation/stable/objects.inv (Caused by ProxyError('Unable to connect to proxy', NewConnectionError(': Failed to establish a new connection: [Errno 111] Connection refused'))) loading intersphinx inventory 'mdahole2' from https://www.mdanalysis.org/mdahole2/objects.inv ... WARNING: failed to reach any of the inventories with the following issues: intersphinx inventory 'https://www.mdanalysis.org/waterdynamics/objects.inv' not fetchable due to : HTTPSConnectionPool(host='www.mdanalysis.org', port=443): Max retries exceeded with url: /waterdynamics/objects.inv (Caused by ProxyError('Unable to connect to proxy', NewConnectionError(': Failed to establish a new connection: [Errno 111] Connection refused'))) loading intersphinx inventory 'pathsimanalysis' from https://www.mdanalysis.org/PathSimAnalysis/objects.inv ... WARNING: failed to reach any of the inventories with the following issues: intersphinx inventory 'https://mdanalysis.org/GridDataFormats/objects.inv' not fetchable due to : HTTPSConnectionPool(host='mdanalysis.org', port=443): Max retries exceeded with url: /GridDataFormats/objects.inv (Caused by ProxyError('Unable to connect to proxy', NewConnectionError(': Failed to establish a new connection: [Errno 111] Connection refused'))) loading intersphinx inventory 'dask' from /usr/share/doc/python-dask-doc/html/objects.inv ... WARNING: failed to reach any of the inventories with the following issues: intersphinx inventory 'https://mdanalysis.org/pmda/objects.inv' not fetchable due to : HTTPSConnectionPool(host='mdanalysis.org', port=443): Max retries exceeded with url: /pmda/objects.inv (Caused by ProxyError('Unable to connect to proxy', NewConnectionError(': Failed to establish a new connection: [Errno 111] Connection refused'))) loading intersphinx inventory 'imdclient' from https://imdclient.readthedocs.io/en/stable/objects.inv ... WARNING: failed to reach any of the inventories with the following issues: intersphinx inventory 'https://www.mdanalysis.org/PathSimAnalysis/objects.inv' not fetchable due to : HTTPSConnectionPool(host='www.mdanalysis.org', port=443): Max retries exceeded with url: /PathSimAnalysis/objects.inv (Caused by ProxyError('Unable to connect to proxy', NewConnectionError(': Failed to establish a new connection: [Errno 111] Connection refused'))) WARNING: failed to reach any of the inventories with the following issues: intersphinx inventory 'https://imdclient.readthedocs.io/en/stable/objects.inv' not fetchable due to : HTTPSConnectionPool(host='imdclient.readthedocs.io', port=443): Max retries exceeded with url: /en/stable/objects.inv (Caused by ProxyError('Unable to connect to proxy', NewConnectionError(': Failed to establish a new connection: [Errno 111] Connection refused'))) WARNING: failed to reach any of the inventories with the following issues: intersphinx inventory 'https://www.mdanalysis.org/mdahole2/objects.inv' not fetchable due to : HTTPSConnectionPool(host='www.mdanalysis.org', port=443): Max retries exceeded with url: /mdahole2/objects.inv (Caused by ProxyError('Unable to connect to proxy', NewConnectionError(': Failed to establish a new connection: [Errno 111] Connection refused'))) locale_dir /build/reproducible-path/mdanalysis-2.10.0/package/doc/sphinx/source/locales/en/LC_MESSAGES does not exist building [mo]: targets for 0 po files that are out of date writing output... building [html]: targets for 179 source files that are out of date updating environment: locale_dir /build/reproducible-path/mdanalysis-2.10.0/package/doc/sphinx/source/locales/en/LC_MESSAGES does not exist [new config] 179 added, 0 changed, 0 removed reading sources... [ 1%] documentation_pages/analysis/align /usr/lib/python3/dist-packages/Bio/Application/__init__.py:39: BiopythonDeprecationWarning: The Bio.Application modules and modules relying on it have been deprecated. Due to the on going maintenance burden of keeping command line application wrappers up to date, we have decided to deprecate and eventually remove these modules. We instead now recommend building your command line and invoking it directly with the subprocess module. warnings.warn( reading sources... [ 1%] documentation_pages/analysis/atomicdistances reading sources... [ 2%] documentation_pages/analysis/backends reading sources... [ 2%] documentation_pages/analysis/base reading sources... [ 3%] documentation_pages/analysis/bat reading sources... [ 3%] documentation_pages/analysis/contacts reading sources... [ 4%] documentation_pages/analysis/data reading sources... [ 4%] documentation_pages/analysis/density reading sources... [ 5%] documentation_pages/analysis/dielectric reading sources... [ 6%] documentation_pages/analysis/diffusionmap reading sources... [ 6%] documentation_pages/analysis/dihedrals mkdir -p failed for path /sbuild-nonexistent/.config/matplotlib: [Errno 13] Permission denied: '/sbuild-nonexistent' Matplotlib created a temporary cache directory at /tmp/matplotlib-whrkxexa because there was an issue with the default path (/sbuild-nonexistent/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing. reading sources... [ 7%] documentation_pages/analysis/distances reading sources... [ 7%] documentation_pages/analysis/dssp reading sources... [ 8%] documentation_pages/analysis/encore reading sources... 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[100%] index /build/reproducible-path/mdanalysis-2.10.0/.pybuild/cpython3_3.13_mdanalysis/build/MDAnalysis/analysis/dssp/dssp.py:docstring of MDAnalysis.analysis.dssp.dssp:25: WARNING: Explicit markup ends without a blank line; unexpected unindent. [docutils] WARNING: autodoc: failed to import module 'utils' from module 'MDAnalysis.analysis.hole2'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'MDAnalysis.analysis.hole2.utils'\n"] [autodoc.import_object] WARNING: autodoc: failed to import module 'templates' from module 'MDAnalysis.analysis.hole2'; the following exception was raised: ['Traceback (most recent call last):\n', ' File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/importer.py", line 269, in import_object\n module = import_module(modname, try_reload=True)\n', ' File "/usr/lib/python3/dist-packages/sphinx/ext/autodoc/importer.py", line 172, in import_module\n raise ModuleNotFoundError(msg, name=modname) # NoQA: TRY301\n ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^\n', "ModuleNotFoundError: No module named 'MDAnalysis.analysis.hole2.templates'\n"] [autodoc.import_object] /build/reproducible-path/mdanalysis-2.10.0/.pybuild/cpython3_3.13_mdanalysis/build/MDAnalysis/analysis/msd.py:docstring of MDAnalysis.analysis.msd.EinsteinMSD:40: ERROR: Unexpected indentation. [docutils] /build/reproducible-path/mdanalysis-2.10.0/.pybuild/cpython3_3.13_mdanalysis/build/MDAnalysis/analysis/rdf.py:docstring of MDAnalysis.analysis.rdf.nested_array_sum:13: ERROR: Unexpected indentation. [docutils] /build/reproducible-path/mdanalysis-2.10.0/.pybuild/cpython3_3.13_mdanalysis/build/MDAnalysis/analysis/rdf.py:docstring of MDAnalysis.analysis.rdf.nested_array_sum:14: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils] /build/reproducible-path/mdanalysis-2.10.0/.pybuild/cpython3_3.13_mdanalysis/build/MDAnalysis/coordinates/PDB.py:docstring of MDAnalysis.coordinates.PDB.PDBReader:68: WARNING: Inline emphasis start-string without end-string. [docutils] /build/reproducible-path/mdanalysis-2.10.0/.pybuild/cpython3_3.13_mdanalysis/build/MDAnalysis/core/universe.py:docstring of MDAnalysis.core.universe.Universe:127: WARNING: Inline strong start-string without end-string. [docutils] /build/reproducible-path/mdanalysis-2.10.0/.pybuild/cpython3_3.13_mdanalysis/build/MDAnalysis/guesser/default_guesser.py:docstring of MDAnalysis.guesser.default_guesser.DefaultGuesser:5: ERROR: Unexpected indentation. [docutils] /build/reproducible-path/mdanalysis-2.10.0/package/doc/sphinx/source/documentation_pages/references.rst:232: ERROR: Unknown directive type "comment". .. comment:: If you use IMD capability with :mod:`MDAnalysis.coordinates.IMD.py`, please cite [IMDv3paper]_. .. [IMDv3paper] Authors (YEAR). IMDv3 Manuscript Title. *Journal*, 185. doi:`insert-doi-here `_ [docutils] /build/reproducible-path/mdanalysis-2.10.0/.pybuild/cpython3_3.13_mdanalysis/build/MDAnalysis/topology/ExtendedPDBParser.py:docstring of MDAnalysis.topology.ExtendedPDBParser.ExtendedPDBParser:29: ERROR: Unexpected section title. See Also -------- [docutils] /build/reproducible-path/mdanalysis-2.10.0/.pybuild/cpython3_3.13_mdanalysis/build/MDAnalysis/topology/TPRParser.py:docstring of MDAnalysis.topology.TPRParser:46: WARNING: Footnote [*] is not referenced. [ref.footnote] docstring of MDAnalysis.topology.tables.atomelements:3: ERROR: Unexpected indentation. [docutils] docstring of MDAnalysis.topology.tables.atomelements:4: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils] docstring of MDAnalysis.topology.tables.atomelements:7: ERROR: Unexpected indentation. [docutils] docstring of MDAnalysis.topology.tables.atomelements:8: WARNING: Inline strong start-string without end-string. [docutils] docstring of MDAnalysis.topology.tables.masses:3: ERROR: Unexpected indentation. [docutils] docstring of MDAnalysis.topology.tables.masses:4: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils] docstring of MDAnalysis.topology.tables.masses:7: ERROR: Unexpected indentation. [docutils] docstring of MDAnalysis.topology.tables.masses:8: WARNING: Inline strong start-string without end-string. [docutils] docstring of MDAnalysis.topology.tables.vdwradii:3: ERROR: Unexpected indentation. [docutils] docstring of MDAnalysis.topology.tables.vdwradii:4: WARNING: Block quote ends without a blank line; unexpected unindent. [docutils] docstring of MDAnalysis.topology.tables.vdwradii:7: ERROR: Unexpected indentation. [docutils] docstring of MDAnalysis.topology.tables.vdwradii:8: WARNING: Inline strong start-string without end-string. [docutils] looking for now-outdated files... none found pickling environment... done checking consistency... done preparing documents... WARNING: unsupported theme option 'mda_official' given done copying assets... copying static files... 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The HTML pages are in /build/reproducible-path/mdanalysis-2.10.0/.pybuild/html. make[2]: Leaving directory '/build/reproducible-path/mdanalysis-2.10.0/package/doc/sphinx' make[1]: Leaving directory '/build/reproducible-path/mdanalysis-2.10.0' create-stamp debian/debhelper-build-stamp dh_testroot -i -O--buildsystem=pybuild dh_prep -i -O--buildsystem=pybuild dh_auto_install -i -O--buildsystem=pybuild I: pybuild plugin_pyproject:178: Copying package built for python3.13 to destdir dh_installdocs -i -O--buildsystem=pybuild dh_installdocs: warning: Cannot auto-detect main package for python-mdanalysis-doc. 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Closes: #1114702 - Build-Depends-Indep: python3-sphinxcontrib.* for doc build: applehelp, bibtex, devhelp, htmlhelp, qthelp, serializinghtml * simplify debian/rules by removing nproc handling for tests * Build-Depends: python3-numpy-dev (for dh_numpy3) * debian patch docs_intersphinx_local.patch adds intersphinx links to local documentation. 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cpp-15-x86-64-linux-gnu (= 15.2.0-5), cpp-x86-64-linux-gnu (= 4:15.2.0-4), cython3 (= 3.0.11+dfsg-2+b1), dash (= 0.5.12-12), debconf (= 1.5.91), debhelper (= 13.28), debianutils (= 5.23.2), dh-autoreconf (= 21), dh-python (= 6.20250414), dh-strip-nondeterminism (= 1.15.0-1), diffutils (= 1:3.12-1), docutils-common (= 0.22.2+dfsg-2), dpkg (= 1.22.21), dpkg-dev (= 1.22.21), dwz (= 0.16-2), file (= 1:5.46-5), findutils (= 4.10.0-3), fontconfig-config (= 2.15.0-2.4), fonts-dejavu-core (= 2.37-8), fonts-dejavu-mono (= 2.37-8), fonts-font-awesome (= 5.0.10+really4.7.0~dfsg-4.1), fonts-lato (= 2.015-1), fonts-lyx (= 2.4.4-2), fonts-mathjax (= 2.7.9+dfsg-1), fonts-open-sans (= 1.11-2), fonts-urw-base35 (= 20200910-8), g++ (= 4:15.2.0-4), g++-15 (= 15.2.0-5), g++-15-x86-64-linux-gnu (= 15.2.0-5), g++-x86-64-linux-gnu (= 4:15.2.0-4), gcc (= 4:15.2.0-4), gcc-15 (= 15.2.0-5), gcc-15-base (= 15.2.0-5), gcc-15-x86-64-linux-gnu (= 15.2.0-5), gcc-x86-64-linux-gnu (= 4:15.2.0-4), gettext (= 0.23.1-2+b1), gettext-base (= 0.23.1-2+b1), grep (= 3.12-1), groff-base (= 1.23.0-9), gzip (= 1.13-1), hostname (= 3.25), init-system-helpers (= 1.69), intltool-debian (= 0.35.0+20060710.6), libabsl20240722 (= 20240722.0-4), libacl1 (= 2.3.2-2+b1), libaec0 (= 1.1.4-2), libaom3 (= 3.13.1-1), libarchive-zip-perl (= 1.68-1), libasan8 (= 15.2.0-5), libatomic1 (= 15.2.0-5), libattr1 (= 1:2.5.2-3), libaudit-common (= 1:4.1.2-1), libaudit1 (= 1:4.1.2-1), libavif16 (= 1.3.0-1+b1), libbinutils (= 2.45-7), libblas3 (= 3.12.1-7), libblkid1 (= 2.41.2-4), libbrotli1 (= 1.1.0-2+b7), libbz2-1.0 (= 1.0.8-6), libc-bin (= 2.41-12), libc-dev-bin (= 2.41-12), libc6 (= 2.41-12), libc6-dev (= 2.41-12), libcairo2 (= 1.18.4-1+b1), libcap-ng0 (= 0.8.5-4+b1), libcap2 (= 1:2.75-10+b1), libcares2 (= 1.34.5-1), libcc1-0 (= 15.2.0-5), libcom-err2 (= 1.47.2-3+b3), libcrypt-dev (= 1:4.4.38-1), libcrypt1 (= 1:4.4.38-1), libctf-nobfd0 (= 2.45-7), libctf0 (= 2.45-7), libcurl3t64-gnutls (= 8.17.0~rc2-1), libcurl4t64 (= 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libicu76 (= 76.1-4), libidn2-0 (= 2.3.8-4), libimagequant0 (= 4.4.0-3), libisl23 (= 0.27-1), libitm1 (= 15.2.0-5), libjansson4 (= 2.14-2+b3), libjbig0 (= 2.1-6.1+b2), libjpeg62-turbo (= 1:2.1.5-4), libjs-jquery (= 3.7.1+dfsg+~3.5.33-1), libjs-mathjax (= 2.7.9+dfsg-1), libjs-sphinxdoc (= 8.2.3-8), libjs-sprintf-js (= 1.1.2+ds1+~1.1.2-1), libjs-underscore (= 1.13.4~dfsg+~1.11.4-3), libjson-perl (= 4.10000-1), libk5crypto3 (= 1.21.3-5), libkeyutils1 (= 1.6.3-6), libkrb5-3 (= 1.21.3-5), libkrb5support0 (= 1.21.3-5), liblapack3 (= 3.12.1-7), liblcms2-2 (= 2.16-2), libldap2 (= 2.6.10+dfsg-1), liblerc4 (= 4.0.0+ds-5), libllhttp9.3 (= 9.3.3~really9.3.0+~cs12.11.8-3), liblsan0 (= 15.2.0-5), liblz4-1 (= 1.10.0-4), liblzf1 (= 3.6-4+b3), liblzma5 (= 5.8.1-2), libmagic-mgc (= 1:5.46-5), libmagic1t64 (= 1:5.46-5), libmd0 (= 1.1.0-2+b1), libmount1 (= 2.41.2-4), libmpc3 (= 1.3.1-2), libmpfr6 (= 4.2.2-2), libncursesw6 (= 6.5+20250216-2), libnetcdf22 (= 1:4.9.3-1+b1), libnettle8t64 (= 3.10.2-1), libnghttp2-14 (= 1.64.0-1.1+b1), libnghttp3-9 (= 1.12.0-1), libngtcp2-16 (= 1.16.0-1), libngtcp2-crypto-gnutls8 (= 1.16.0-1), libngtcp2-crypto-ossl0 (= 1.16.0-1), libnode115 (= 20.19.5+dfsg+~cs20.19.12-4), libopenjp2-7 (= 2.5.3-2.1), libp11-kit0 (= 0.25.9-2), libpam-modules (= 1.7.0-5), libpam-modules-bin (= 1.7.0-5), libpam-runtime (= 1.7.0-5), libpam0g (= 1.7.0-5), libpcre2-8-0 (= 10.46-1), libperl5.40 (= 5.40.1-6), libpipeline1 (= 1.5.8-1), libpixman-1-0 (= 0.46.4-1), libpng16-16t64 (= 1.6.50-1), libproc2-0 (= 2:4.0.4-9), libpsl5t64 (= 0.21.2-1.1+b1), libpython3-all-dev (= 3.13.7-1), libpython3-dev (= 3.13.7-1), libpython3-stdlib (= 3.13.7-1), libpython3.13 (= 3.13.9-1), libpython3.13-dev (= 3.13.9-1), libpython3.13-minimal (= 3.13.9-1), libpython3.13-stdlib (= 3.13.9-1), libqhull-r8.0 (= 2020.2-7), libquadmath0 (= 15.2.0-5), libraqm0 (= 0.10.3-1), librav1e0.8 (= 0.8.1-5), libreadline8t64 (= 8.3-3), librtmp1 (= 2.4+20151223.gitfa8646d.1-3), libsasl2-2 (= 2.1.28+dfsg1-10), libsasl2-modules-db (= 2.1.28+dfsg1-10), libseccomp2 (= 2.6.0-2), libselinux1 (= 3.9-2), libsframe2 (= 2.45-7), libsharpyuv0 (= 1.5.0-0.1), libsmartcols1 (= 2.41.2-4), libsqlite3-0 (= 3.46.1-8), libssh2-1t64 (= 1.11.1-1), libssl3t64 (= 3.5.4-1), libstdc++-15-dev (= 15.2.0-5), libstdc++6 (= 15.2.0-5), libsvtav1enc2 (= 2.3.0+dfsg-1), libsystemd0 (= 258.1-1), libsz2 (= 1.1.4-2), libtasn1-6 (= 4.20.0-2), libtcl8.6 (= 8.6.17+dfsg-1), libtiff6 (= 4.7.1-1), libtinfo6 (= 6.5+20250216-2), libtk8.6 (= 8.6.17-1), libtool (= 2.5.4-7), libtsan2 (= 15.2.0-5), libubsan1 (= 15.2.0-5), libuchardet0 (= 0.0.8-2), libudev1 (= 258.1-1), libunistring5 (= 1.3-2), libuuid1 (= 2.41.2-4), libuv1t64 (= 1.51.0-2), libwebp7 (= 1.5.0-0.1), libwebpdemux2 (= 1.5.0-0.1), libwebpmux3 (= 1.5.0-0.1), libx11-6 (= 2:1.8.12-1), libx11-data (= 2:1.8.12-1), libxau6 (= 1:1.0.11-1), libxcb-render0 (= 1.17.0-2+b1), libxcb-shm0 (= 1.17.0-2+b1), libxcb1 (= 1.17.0-2+b1), libxdmcp6 (= 1:1.1.5-1), libxext6 (= 2:1.3.4-1+b3), libxft2 (= 2.3.6-1+b4), libxml2-16 (= 2.14.6+dfsg-0.1), libxrender1 (= 1:0.9.12-1), libxslt1.1 (= 1.1.43-0.2), libxss1 (= 1:1.2.3-1+b3), libxxhash0 (= 0.8.3-2), libyaml-0-2 (= 0.2.5-2), libyuv0 (= 0.0.1919.20250919-1), libzopfli1 (= 1.0.3-3), libzstd1 (= 1.5.7+dfsg-2), linux-libc-dev (= 6.16.12-2), m4 (= 1.4.20-2), make (= 4.4.1-2), man-db (= 2.13.1-1), mawk (= 1.3.4.20250131-1), media-types (= 14.0.0), ncurses-base (= 6.5+20250216-2), ncurses-bin (= 6.5+20250216-2), netbase (= 6.5), node-acorn (= 8.8.1+ds+~cs25.17.7-2), node-argparse (= 2.0.1-2), node-balanced-match (= 2.0.0-1), node-brace-expansion (= 2.0.1+~1.1.0-2), node-cjs-module-lexer (= 1.2.3+dfsg-1), node-corepack (= 0.24.0-5), node-debug (= 4.4.1+~4.1.12-1), node-esprima (= 4.0.1+ds+~4.0.3-2), node-js-yaml (= 4.1.0+dfsg+~4.0.5-7), node-llhttp (= 9.3.3~really9.3.0+~cs12.11.8-3), node-lru-cache (= 10.0.1-3), node-minimatch (= 9.0.3-6), node-ms (= 2.1.3+~cs0.7.31-3), node-semver (= 7.6.1+~7.5.8-2), node-sprintf-js (= 1.1.2+ds1+~1.1.2-1), node-undici (= 7.16.0+dfsg+~cs3.2.0-2), node-xtend (= 4.0.2-3), nodejs (= 20.19.5+dfsg+~cs20.19.12-4), openssl (= 3.5.4-1), openssl-provider-legacy (= 3.5.4-1), patch (= 2.8-2), perl (= 5.40.1-6), perl-base (= 5.40.1-6), perl-modules-5.40 (= 5.40.1-6), po-debconf (= 1.0.21+nmu1), procps (= 2:4.0.4-9), pybuild-plugin-pyproject (= 6.20250414), python-babel-localedata (= 2.17.0-1), python-dask-doc (= 2024.12.1+dfsg-2), python-gsd-doc (= 4.0.0-1), python-h5py-doc (= 3.14.0-3), python-matplotlib-data (= 3.10.1+dfsg1-6), python-matplotlib-doc (= 3.10.1+dfsg1-6), python-numpy-doc (= 1:2.3.3+ds-3), python-scipy-doc (= 1.16.2-2), python3 (= 3.13.7-1), python3-alabaster (= 0.7.16-0.1), python3-all (= 3.13.7-1), python3-all-dev (= 3.13.7-1), python3-attr (= 25.4.0-1), python3-autocommand (= 2.2.2-3), python3-babel (= 2.17.0-1), python3-biopython (= 1.85+dfsg-5), python3-brotli (= 1.1.0-2+b7), python3-build (= 1.2.2-4), python3-cairo (= 1.27.0-2), python3-certifi (= 2025.1.31+ds-1), python3-cftime (= 1.6.5-1), python3-chardet (= 5.2.0+dfsg-2), python3-charset-normalizer (= 3.4.3-1), python3-citeproc (= 0.9.0-1), python3-contourpy (= 1.3.1-2), python3-cycler (= 0.12.1-2), python3-dateutil (= 2.9.0-4), python3-decorator (= 5.2.1-2), python3-defusedxml (= 0.7.1-3), python3-dev (= 3.13.7-1), python3-doc (= 3.13.7-1), python3-docutils (= 0.22.2+dfsg-2), python3-duecredit (= 0.10.2-2), python3-fasteners (= 0.19-2), python3-filelock (= 3.20.0-1), python3-fonttools (= 4.57.0-2), python3-freetype (= 2.5.1-2), python3-fs (= 2.4.16-8), python3-griddataformats (= 1.0.2-2), python3-gsd (= 4.0.0-1), python3-h5py (= 3.14.0-3), python3-h5py-serial (= 3.14.0-3), python3-hypothesis (= 6.140.2-1), python3-idna (= 3.10-1), python3-imagesize (= 1.4.1-1), python3-inflect (= 7.5.0-1), python3-iniconfig (= 1.1.1-2), python3-installer (= 0.7.0+dfsg1-3), python3-jaraco.context (= 6.0.1-1), python3-jaraco.functools (= 4.1.0-1), python3-jaraco.text (= 4.0.0-1), python3-jinja2 (= 3.1.6-1), python3-joblib (= 1.4.2-5), python3-kiwisolver (= 1.4.10~rc0-1), python3-latexcodec (= 3.0.0-1), python3-looseversion (= 1.3.0-3), python3-lxml (= 6.0.2-1), python3-lz4 (= 4.4.4+dfsg-3), python3-markupsafe (= 3.0.3-1), python3-matplotlib (= 3.10.1+dfsg1-6), python3-mda-xdrlib (= 0.2.0-3), python3-minimal (= 3.13.7-1), python3-mmtf (= 1.1.3-1), python3-monotonic (= 1.6-3), python3-more-itertools (= 10.8.0-1), python3-mpmath (= 1.3.0-1), python3-mrcfile (= 1.5.4-2), python3-msgpack (= 1.0.3-3+b4), python3-msmb-theme (= 1.2.0-4), python3-netcdf4 (= 1.7.3-1), python3-networkx (= 3.4.2-2), python3-numpy (= 1:2.3.3+ds-3), python3-numpy-dev (= 1:2.3.3+ds-3), python3-packaging (= 25.0-1), python3-pandas (= 2.3.3+dfsg-1), python3-pandas-lib (= 2.3.3+dfsg-1), python3-pil (= 11.3.0-1), python3-pil.imagetk (= 11.3.0-1), python3-pkg-resources (= 78.1.1-0.1), python3-platformdirs (= 4.4.0-1), python3-pluggy (= 1.6.0-1), python3-pybtex (= 0.25.1-1), python3-pybtex-docutils (= 1.0.3-1), python3-pygments (= 2.18.0+dfsg-2), python3-pyparsing (= 3.1.3-1), python3-pyproject-hooks (= 1.2.0-1), python3-pytest (= 8.4.2-1), python3-pytz (= 2025.2-4), python3-reportlab (= 4.4.4-2), python3-requests (= 2.32.5+dfsg-1), python3-rlpycairo (= 0.3.0-4), python3-roman-numerals (= 3.1.0-2), python3-scipy (= 1.16.2-2), python3-seaborn (= 0.13.2-5), python3-setuptools (= 78.1.1-0.1), python3-sklearn (= 1.7.2+dfsg-3), python3-sklearn-lib (= 1.7.2+dfsg-3), python3-snowballstemmer (= 3.0.1-1), python3-sortedcontainers (= 2.4.0-2), python3-sphinx (= 8.2.3-8), python3-sphinx-rtd-theme (= 3.0.2+dfsg-3), python3-sphinx-sitemap (= 2.6.0-1), python3-sphinxcontrib.applehelp (= 2.0.0-1), python3-sphinxcontrib.bibtex (= 2.6.5-3), python3-sphinxcontrib.devhelp (= 2.0.0-1), python3-sphinxcontrib.htmlhelp (= 2.1.0-1), python3-sphinxcontrib.jquery (= 4.1-6), python3-sphinxcontrib.qthelp (= 2.0.0-1), python3-sphinxcontrib.serializinghtml (= 2.0.0-1), python3-sympy (= 1.14.0-2), python3-threadpoolctl (= 3.1.0-1), python3-tk (= 3.13.9-1), python3-tqdm (= 4.67.1-6), python3-typeguard (= 4.4.4-1), python3-typing-extensions (= 4.15.0-1), python3-ufolib2 (= 0.17.1+dfsg1-1), python3-urllib3 (= 2.5.0-1), python3-wheel (= 0.46.1-2), python3-yaml (= 6.0.2-2), python3-zipp (= 3.23.0-1), python3-zopfli (= 0.2.3.post1-1+b1), python3.13 (= 3.13.9-1), python3.13-dev (= 3.13.9-1), python3.13-doc (= 3.13.9-1), python3.13-minimal (= 3.13.9-1), python3.13-tk (= 3.13.9-1), rdkit-doc (= 202503.6-2), readline-common (= 8.3-3), rpcsvc-proto (= 1.4.3-1), sed (= 4.9-2), sensible-utils (= 0.0.26), sgml-base (= 1.31+nmu1), sphinx-common (= 8.2.3-8), sphinx-rtd-theme-common (= 3.0.2+dfsg-3), sysvinit-utils (= 3.14-4), tar (= 1.35+dfsg-3.1), tk8.6-blt2.5 (= 2.5.3+dfsg-8), tzdata (= 2025b-5), unicode-data (= 16.0.0-1), util-linux (= 2.41.2-4), w3c-sgml-lib (= 1.3-3), x11-common (= 1:7.7+26), xfonts-encodings (= 1:1.0.4-2.2), xfonts-utils (= 1:7.7+7), xml-core (= 0.19), xz-utils (= 5.8.1-2), zlib1g (= 1:1.3.dfsg+really1.3.1-1+b1), zlib1g-dev (= 1:1.3.dfsg+really1.3.1-1+b1) Environment: DEB_BUILD_OPTIONS="parallel=6" LANG="C.UTF-8" LC_COLLATE="C.UTF-8" LC_CTYPE="C.UTF-8" SOURCE_DATE_EPOCH="1761087011" +------------------------------------------------------------------------------+ | Package contents Sat, 01 Nov 2025 13:38:14 +0000 | +------------------------------------------------------------------------------+ python-mdanalysis-doc_2.10.0-1_all.deb -------------------------------------- new Debian package, version 2.0. size 3549048 bytes: control archive=14208 bytes. 1596 bytes, 36 lines control 65331 bytes, 538 lines md5sums Package: python-mdanalysis-doc Source: mdanalysis Version: 2.10.0-1 Architecture: all Maintainer: Debichem Team Installed-Size: 24715 Depends: libjs-mathjax, libjs-sphinxdoc (>= 8.2) Section: doc Priority: optional Multi-Arch: foreign Homepage: https://www.mdanalysis.org/ Description: analyse molecular dynamics files and trajectories ( documentation) MDAnalysis is a Python library for the analysis of computer simulations of many-body systems at the molecular scale, spanning use cases from interactions of drugs with proteins to novel materials. It is widely used in the scientific community and is written by scientists for scientists. . MDAnalysis allows one to read particle-based trajectories (including individual coordinate frames such as biomolecules in the PDB format) and access the atomic coordinates through NumPy arrays. This provides a flexible and relatively fast framework for complex analysis tasks. In addition, powerful atom selection commands are implemented. Trajectories can also be manipulated (for instance, fit to a reference structure) and written out. . It works with a wide range of popular simulation packages including Gromacs, Amber, NAMD, CHARMM, DL_Poly, HooMD, LAMMPS and many others — see the lists of supported trajectory formats and topology formats. MDAnalysis also includes widely used analysis algorithms in the MDAnalysis.analysis module. . The MDAnalysis project uses an open governance model and is fiscally sponsored by NumFOCUS. . 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2025-10-21 22:50 ./usr/share/doc/python-mdanalysis-doc/html/sitemap.xml.gz +------------------------------------------------------------------------------+ | Post Build Sat, 01 Nov 2025 13:38:14 +0000 | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup Sat, 01 Nov 2025 13:38:14 +0000 | +------------------------------------------------------------------------------+ Purging /build/reproducible-path Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary Sat, 01 Nov 2025 13:38:18 +0000 | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Type: all Build-Space: 355316 Build-Time: 198 Distribution: unstable Host Architecture: amd64 Install-Time: 4 Job: /srv/rebuilderd/tmp/rebuilderdnQaZYI/inputs/mdanalysis_2.10.0-1.dsc Machine Architecture: amd64 Package: mdanalysis Package-Time: 222 Source-Version: 2.10.0-1 Space: 355316 Status: successful Version: 2.10.0-1 -------------------------------------------------------------------------------- Finished at 2025-11-01T13:38:12Z Build needed 00:03:42, 355316k disk space build artifacts stored in /srv/rebuilderd/tmp/rebuilderdnQaZYI/out checking python-mdanalysis-doc_2.10.0-1_all.deb: size differs for python-mdanalysis-doc_2.10.0-1_all.deb