=============================================================================== About this build: this rebuild has been done as part of reproduce.debian.net where we aim to reproduce Debian binary packages distributed via ftp.debian.org, by rebuilding using the exact same packages as the original build on the buildds, as described in the relevant .buildinfo file from buildinfos.debian.net. For more information please go to https://reproduce.debian.net or join #debian-reproducible on irc.debian.org =============================================================================== Preparing download of sources for /srv/rebuilderd/tmp/rebuilderdCFStT7/inputs/r-bioc-grohmm_1.40.3-3_amd64.buildinfo Source: r-bioc-grohmm Version: 1.40.3-3 rebuilderd-worker node: osuosl4-amd64 +------------------------------------------------------------------------------+ | Downloading sources Sat, 09 Aug 2025 21:20:22 +0000 | +------------------------------------------------------------------------------+ Get:1 https://deb.debian.org/debian trixie InRelease [138 kB] Get:2 https://deb.debian.org/debian sid InRelease [216 kB] Get:3 https://deb.debian.org/debian trixie/main Sources [10.5 MB] Get:4 https://deb.debian.org/debian sid/main Sources [11.0 MB] Fetched 21.9 MB in 2s (10.0 MB/s) Reading package lists... 'https://deb.debian.org/debian/pool/main/r/r-bioc-grohmm/r-bioc-grohmm_1.40.3-3.dsc' r-bioc-grohmm_1.40.3-3.dsc 2223 SHA256:a41f096ba682158637b9f376a3297498b26d6c1d2c33a41991c91f4de9c29b2e 'https://deb.debian.org/debian/pool/main/r/r-bioc-grohmm/r-bioc-grohmm_1.40.3.orig.tar.gz' r-bioc-grohmm_1.40.3.orig.tar.gz 4364803 SHA256:2c5c187f42b084f304eeeb9fae11678de0d526780cb2cc9c5d21608533eda97f 'https://deb.debian.org/debian/pool/main/r/r-bioc-grohmm/r-bioc-grohmm_1.40.3-3.debian.tar.xz' r-bioc-grohmm_1.40.3-3.debian.tar.xz 4556 SHA256:34a18e569eff6d3cbfdf3f298cc2040331a045f0d9dba6b22f258505502fe549 2c5c187f42b084f304eeeb9fae11678de0d526780cb2cc9c5d21608533eda97f r-bioc-grohmm_1.40.3.orig.tar.gz 34a18e569eff6d3cbfdf3f298cc2040331a045f0d9dba6b22f258505502fe549 r-bioc-grohmm_1.40.3-3.debian.tar.xz a41f096ba682158637b9f376a3297498b26d6c1d2c33a41991c91f4de9c29b2e r-bioc-grohmm_1.40.3-3.dsc +------------------------------------------------------------------------------+ | Calling debrebuild Sat, 09 Aug 2025 21:20:25 +0000 | +------------------------------------------------------------------------------+ Rebuilding r-bioc-grohmm=1.40.3-3 in /srv/rebuilderd/tmp/rebuilderdCFStT7/inputs now. +------------------------------------------------------------------------------+ | WARNING: calling debrebuild without --cache, hammering snapshot.d.o :( | +------------------------------------------------------------------------------+ + nice /usr/bin/debrebuild --buildresult=/srv/rebuilderd/tmp/rebuilderdCFStT7/out --builder=sbuild+unshare -- /srv/rebuilderd/tmp/rebuilderdCFStT7/inputs/r-bioc-grohmm_1.40.3-3_amd64.buildinfo /srv/rebuilderd/tmp/rebuilderdCFStT7/inputs/r-bioc-grohmm_1.40.3-3_amd64.buildinfo contains a GPG signature which has NOT been validated Using defined Build-Path: /build/reproducible-path/r-bioc-grohmm-1.40.3 I: verifying dsc... successful! dpkg-name: info: moved 'a596798c43b00a507bd26b2f5ef5af509c41cf93' to '/srv/rebuilderd/tmp/tmpo6jovc20/libdb5.3t64_5.3.28+dfsg2-9_amd64.deb' dpkg-name: info: moved '145f1be0efb24a586282758ea5ea5e3496e2b8dc' to '/srv/rebuilderd/tmp/tmp3x6gc337/cpp-x86-64-linux-gnu_14.2.0-1_amd64.deb' dpkg-name: info: moved '44b247687c034c8a4142204f0827f7286614b354' to '/srv/rebuilderd/tmp/tmp9evcebg_/libselinux1_3.8.1-1_amd64.deb' dpkg-name: info: moved 'e14183a68d59c151293b551e0e0923c189d94b3b' to '/srv/rebuilderd/tmp/tmpsz_fo9k7/libncurses-dev_6.5+20250216-2_amd64.deb' dpkg-name: info: moved '9c3c589e4650276987127e9c521913d39aafd5ed' to '/srv/rebuilderd/tmp/tmpjig8p0v5/libkrb5-3_1.21.3-5_amd64.deb' dpkg-name: info: moved '2f2c7dbb9a6ab04a149b44daf47a719f0715fa71' to '/srv/rebuilderd/tmp/tmpx7gzan3y/libpkgconf3_1.8.1-4_amd64.deb' dpkg-name: info: moved '716cbed29d8c66de3363e40a9d2ed7959af1b659' to '/srv/rebuilderd/tmp/tmps4ebrzpz/xdg-utils_1.2.1-2_all.deb' dpkg-name: info: moved 'b094813d4ea39997a3a798b356961ab080b31428' to '/srv/rebuilderd/tmp/tmp4ek2anvp/libreadline8t64_8.2-6_amd64.deb' dpkg-name: info: moved 'd37305bbead70f077cc984734e0a92edf49b7cc3' to '/srv/rebuilderd/tmp/tmpl5tfc127/libboost1.83-dev_1.83.0-4.2_amd64.deb' dpkg-name: info: moved 'ffcadd6d1344effb12506689f64c7e2758d01b45' to '/srv/rebuilderd/tmp/tmpr7sjau05/dh-strip-nondeterminism_1.14.1-2_all.deb' dpkg-name: info: moved 'e06bb16e07a1f267fd8e8c62c3bf6ea6226c636f' to '/srv/rebuilderd/tmp/tmpsf6o_rwf/libpackage-deprecationmanager-perl_0.18-1_all.deb' dpkg-name: info: moved 'f7467a7bd574cbb3b1466b0640e21f1cf9a05cd5' to '/srv/rebuilderd/tmp/tmp_5j90hza/r-cran-cpp11_0.5.2-1_all.deb' dpkg-name: info: moved '2390204ccaf310cea4f55ffbcd223d403c7bf0ac' to '/srv/rebuilderd/tmp/tmpt19zs21p/libmpfr6_4.2.2-1_amd64.deb' dpkg-name: info: moved 'f7b230ddaa3127073239649f4af2d6d8897d717a' to '/srv/rebuilderd/tmp/tmp__9klbs6/cpp_14.2.0-1_amd64.deb' dpkg-name: info: moved 'c448da94739cdf78f6c3b52184d844d1985dbf71' to '/srv/rebuilderd/tmp/tmp5wqbit8s/ncurses-bin_6.5+20250216-2_amd64.deb' dpkg-name: info: moved '99812922c68bb465d51ea6a02819449f038830f4' to '/srv/rebuilderd/tmp/tmpq1btr_s8/libblas3_3.12.1-2_amd64.deb' dpkg-name: info: moved '2d15c26c60a7d26e40e6335bc16287c300c055df' to '/srv/rebuilderd/tmp/tmp7857a5pr/m4_1.4.19-8_amd64.deb' dpkg-name: info: moved '4d9e9db02daf74178b6aa6d99b3cc64cc4308a74' to '/srv/rebuilderd/tmp/tmp1jx1kntq/libffi8_3.4.8-2_amd64.deb' dpkg-name: info: moved 'e6b3f1d392a73d2905bd5f3ed704b885ff4d907c' to '/srv/rebuilderd/tmp/tmpv62f7_6g/r-cran-mime_0.12-2_amd64.deb' dpkg-name: info: moved '13d0fbcd55784b387c2c3732f2b9c1393dc76656' to '/srv/rebuilderd/tmp/tmpo974ia2a/r-cran-jsonlite_1.9.1+dfsg-1_amd64.deb' dpkg-name: info: moved '691331f4a339abb0f77701dfb6dad9d3fa4aff4a' to '/srv/rebuilderd/tmp/tmpn8ji_9ek/r-cran-matrix_1.7-3-1_amd64.deb' dpkg-name: info: moved '0d96f540dea3afe5081c1f63f1d96971974eaaca' to '/srv/rebuilderd/tmp/tmpvn8rrklc/libpcre2-posix3_10.45-1_amd64.deb' dpkg-name: info: moved '27d50447e3dc5c8433f84d6ecc37a565e2abf4aa' to '/srv/rebuilderd/tmp/tmp40y0kk5e/r-cran-snow_0.4.4-2_all.deb' dpkg-name: info: moved '785d98c02f469c07263905d291be5f1e95d0f4eb' to '/srv/rebuilderd/tmp/tmpaxa4nr7x/dwz_0.15-1+b1_amd64.deb' dpkg-name: info: moved 'e4f413d0831dd8595af7b42d73fe441032cd588c' to '/srv/rebuilderd/tmp/tmp5wiox5cn/libnamespace-clean-perl_0.27-2_all.deb' dpkg-name: info: moved '82b9cd3f79e24ce65c1e9ef3398f40b3b1d71776' to '/srv/rebuilderd/tmp/tmpnjnp_07g/r-cran-restfulr_0.0.15-1_amd64.deb' dpkg-name: info: moved 'd0a17d2fd0129c86bb0302e7591142567c24491a' to '/srv/rebuilderd/tmp/tmpi4z9vg7t/libsub-identify-perl_0.14-3+b3_amd64.deb' dpkg-name: info: moved 'ec2a18da55b53e48472fc88c9893b0c574d4fc3b' to '/srv/rebuilderd/tmp/tmpvrgwr3t5/libnghttp3-9_1.8.0-1_amd64.deb' dpkg-name: info: moved '8a9ad8e68f7c76c1a7d07a38c0d41a87687c0958' to '/srv/rebuilderd/tmp/tmp_z_b7es7/libuuid1_2.41-4_amd64.deb' dpkg-name: info: moved 'f86b6bf0b69e2187cb2f063a790fda7387f481a1' to '/srv/rebuilderd/tmp/tmpfdnaej5k/libxt6t64_1.2.1-1.2+b2_amd64.deb' dpkg-name: info: moved '9d3dd3d5dacc003fe03ad55d6aa418f62fd98edc' to '/srv/rebuilderd/tmp/tmpve4acm_d/libmount1_2.41-4_amd64.deb' dpkg-name: info: moved '5d211a4b24943b3e2cf8a17c46043c6d86d84176' to '/srv/rebuilderd/tmp/tmpjqfz0mic/libxft2_2.3.6-1+b4_amd64.deb' dpkg-name: info: moved '440b748a4c3a2e8ce2efa462eaa39ec11cc80fec' to '/srv/rebuilderd/tmp/tmpn8ub3f5b/libreadline-dev_8.2-6_amd64.deb' dpkg-name: info: moved 'ac8c7d8bf9611123b258c1367761d7a7c5b947ee' to '/srv/rebuilderd/tmp/tmpaok_hyyi/r-bioc-biostrings_2.74.1+dfsg-2_amd64.deb' dpkg-name: info: moved '6fcf4cea44e16adc867b1ef137b682bd231c0375' to '/srv/rebuilderd/tmp/tmpuwlj7atd/zip_3.0-15_amd64.deb' dpkg-name: info: moved '95c13b719f566b4bf35665bf6e97e38f6c76aac2' to '/srv/rebuilderd/tmp/tmpaen57p40/libtasn1-6_4.20.0-2_amd64.deb' dpkg-name: info: moved '7074e54ad2299b13627d8c7b31f5abf6f6e6bda1' to '/srv/rebuilderd/tmp/tmp4yl00386/libdevel-overloadinfo-perl_0.007-1_all.deb' dpkg-name: info: moved '2dcf1d28b17c7ad22fdbd8ae4e8389e45f30ece7' to '/srv/rebuilderd/tmp/tmpbz2j0a4u/libcom-err2_1.47.2-1+b1_amd64.deb' dpkg-name: info: moved 'f61bcdb048e19375d7d440c04369cd41ea3915e7' to '/srv/rebuilderd/tmp/tmpc52xzagf/libsystemd0_257.5-2_amd64.deb' dpkg-name: info: moved '5f641dd0360c1c434afc87407fa30aca3a83e436' to '/srv/rebuilderd/tmp/tmpyydqszze/libpam-modules-bin_1.7.0-3_amd64.deb' dpkg-name: info: moved 'a8e9e646433bccd399aeae2b635a76b9dcd96279' to '/srv/rebuilderd/tmp/tmp9auwth28/libclass-load-xs-perl_0.10-2+b4_amd64.deb' dpkg-name: info: moved 'b7fb1c0f753df055d7fb3e9a05368cb5d10c609f' to '/srv/rebuilderd/tmp/tmpa59_qwyj/libsub-exporter-perl_0.990-1_all.deb' dpkg-name: info: moved 'c33e852294d401967f3cc059e897294f805722a9' to '/srv/rebuilderd/tmp/tmpmakpgqx2/r-cran-rcurl_1.98-1.16+dfsg-1_amd64.deb' dpkg-name: info: moved '9e4d02ea5bb9018fff66731a7772086ac2333d7f' to '/srv/rebuilderd/tmp/tmp9ro4gfdm/libncursesw6_6.5+20250216-2_amd64.deb' dpkg-name: info: moved '35d0919bfaccb06d3ff36e443700f3c41760fb33' to '/srv/rebuilderd/tmp/tmpauqaobib/libencode-locale-perl_1.05-3_all.deb' dpkg-name: info: moved 'b404f35895f61d21ff74d3b05e9835d88db1461a' to '/srv/rebuilderd/tmp/tmp7kahg4om/libpng16-16t64_1.6.47-1.1_amd64.deb' dpkg-name: info: moved 'a2adf378ad7d94c6039b44572464d4fb7532b658' to '/srv/rebuilderd/tmp/tmpdgqbpmlg/bash_5.2.37-2_amd64.deb' dpkg-name: info: moved '9c0de48c6d7394c11f033bbfc6450c460f9fdbd1' to '/srv/rebuilderd/tmp/tmpnb6lppcs/libclass-c3-perl_0.35-2_all.deb' dpkg-name: info: moved '66492159529d171cb6e0b2257177632ffaee79e0' to '/srv/rebuilderd/tmp/tmpaussvgm1/libeval-closure-perl_0.14-3_all.deb' dpkg-name: info: moved '0ffdad3f7f0ac9538cd6be4d51a9e02e72f733bf' to '/srv/rebuilderd/tmp/tmp8xsdld0r/r-cran-yaml_2.3.10-1_amd64.deb' dpkg-name: info: moved 'a93fa689de642b7df338c49bd948d00052894e84' to '/srv/rebuilderd/tmp/tmptoaorhbd/liblapack-dev_3.12.1-2_amd64.deb' dpkg-name: info: moved '8b65ea4d11e396dfe3f25cb59228cc83b8929d05' to '/srv/rebuilderd/tmp/tmp6su4lyx6/r-bioc-summarizedexperiment_1.36.0+dfsg-2_all.deb' dpkg-name: info: moved 'c22eb1f2ef879b6267afbfd4c03f7df9416d656c' to '/srv/rebuilderd/tmp/tmpxf8qel65/libdevel-globaldestruction-perl_0.14-4_all.deb' dpkg-name: info: moved 'bce43f0f072e7b7a006af003794e439520678a8e' to '/srv/rebuilderd/tmp/tmp4ht5zhmc/ucf_3.0051_all.deb' dpkg-name: info: moved '0871447d503bebecdb00c78ee1de6ac86b55e04c' to '/srv/rebuilderd/tmp/tmpzik1dy1u/libpackage-stash-xs-perl_0.30-1+b4_amd64.deb' dpkg-name: info: moved 'd04a7083effc3294a82a6db9f050f69bdf1b5adf' to '/srv/rebuilderd/tmp/tmpe_kogpnt/gcc-x86-64-linux-gnu_14.2.0-1_amd64.deb' dpkg-name: info: moved 'cefbbeb41869ffacff621e1a31bf66617df50832' to '/srv/rebuilderd/tmp/tmpgj1zoak7/libelf1t64_0.192-4_amd64.deb' dpkg-name: info: moved 'aa875840d018eaefad88dfdb55fd3307d93e5a69' to '/srv/rebuilderd/tmp/tmpnr7h32uu/libicu-dev_76.1-3_amd64.deb' dpkg-name: info: moved '721d9692ffd65ded56bf4de880f199ec188aa04f' to '/srv/rebuilderd/tmp/tmpw1tsb1e8/libpsl5t64_0.21.2-1.1+b1_amd64.deb' dpkg-name: info: moved 'f48c3d0623dee0ec391a3889424e8660369a4da8' to '/srv/rebuilderd/tmp/tmpckzuy9ee/libdynaloader-functions-perl_0.004-2_all.deb' dpkg-name: info: moved 'dfabfaf82e6e07e2d08a8aef9ac1864898634c76' to '/srv/rebuilderd/tmp/tmppwzgr4bu/libharfbuzz0b_10.2.0-1+b1_amd64.deb' dpkg-name: info: moved 'd63b7660a967fd9c4638fcd086890ca86c23a946' to '/srv/rebuilderd/tmp/tmp3j_9znga/libmoose-perl_2.2207-1+b3_amd64.deb' dpkg-name: info: moved 'f18c65851945accdac8706a6175eb94dbeb70912' to '/srv/rebuilderd/tmp/tmpi2689i30/libhogweed6t64_3.10.1-1_amd64.deb' dpkg-name: info: moved '6521c4fb859cda27142c655d2aa30c9d31e40ff7' to '/srv/rebuilderd/tmp/tmp2_db6stn/zlib1g_1.3.dfsg+really1.3.1-1+b1_amd64.deb' dpkg-name: info: moved '4772aba15d8f6bdd7e6410106da0a81e84da3ce9' to '/srv/rebuilderd/tmp/tmpf7z2u986/r-bioc-ucsc.utils_1.2.0+ds-2_all.deb' dpkg-name: info: moved '17e2275e726dad554ab38aa3f3d240f5270923cb' to '/srv/rebuilderd/tmp/tmpr7svj93p/gzip_1.13-1_amd64.deb' dpkg-name: info: moved 'b747e3c3e48f614b7b495127df56be5b5ef1b7c5' to '/srv/rebuilderd/tmp/tmpq2nsqtpv/libmodule-implementation-perl_0.09-2_all.deb' dpkg-name: info: moved '413e1099ce7054cba369061be0cd27ed62ea8fbe' to '/srv/rebuilderd/tmp/tmp__8amay_/libpcre2-32-0_10.45-1_amd64.deb' dpkg-name: info: moved '4bdf04dea0fdc741d5dd942a2d02f26cef5378a6' to '/srv/rebuilderd/tmp/tmp9l0k0whu/libtimedate-perl_2.3300-2_all.deb' dpkg-name: info: moved '706ed322be3f8c5eaef0fa1e1fc9529e6320e53d' to '/srv/rebuilderd/tmp/tmph8pxo4a3/libnettle8t64_3.10.1-1_amd64.deb' dpkg-name: info: moved '4541a0dcad720ce49073003c359e32c87a5acf19' to '/srv/rebuilderd/tmp/tmpmvs_koji/libdevel-callchecker-perl_0.009-2_amd64.deb' dpkg-name: info: moved '49e3032a7bb85c144d013d237eb8022e499a640c' to '/srv/rebuilderd/tmp/tmpsjiz19dw/libunistring5_1.3-2_amd64.deb' dpkg-name: info: moved 'ed449d06d1e84c56deb2487977971e46ba5cf699' to '/srv/rebuilderd/tmp/tmpt0kn7klk/intltool-debian_0.35.0+20060710.6_all.deb' dpkg-name: info: moved 'e3bb06b8e1842b3876f98c276d12bf98b51fd907' to '/srv/rebuilderd/tmp/tmp1parzcoi/diffutils_3.10-4_amd64.deb' dpkg-name: info: moved 'e89e756bb96922a7d849f18c9a9438ce448c999f' to '/srv/rebuilderd/tmp/tmpalo2vs9f/libpaper2_2.2.5-0.3+b2_amd64.deb' dpkg-name: info: moved 'a6cefb3d0f9dfc035682d19ad0315b72181aaef1' to '/srv/rebuilderd/tmp/tmp7r8zxmtg/openssl-provider-legacy_3.5.0-1_amd64.deb' dpkg-name: info: moved '0b4a4bfa9dbbb08a0824a082e9eaeb4ea736feeb' to '/srv/rebuilderd/tmp/tmpmmftc6mv/perl-modules-5.40_5.40.1-3_all.deb' dpkg-name: info: moved 'd4bf45ca8c15b071cc9275057c1e1c8a283b2613' to '/srv/rebuilderd/tmp/tmp1y3mrjpk/r-bioc-xvector_0.46.0-2_amd64.deb' dpkg-name: info: moved 'b4661297127730046296994de75f95dc2ede3778' to '/srv/rebuilderd/tmp/tmp5_bn15ju/r-cran-rjson_0.2.23-1_amd64.deb' dpkg-name: info: moved '7af2404a70d975b8a0e61f41808855df52416820' to '/srv/rebuilderd/tmp/tmpmck8ht9j/sysvinit-utils_3.14-4_amd64.deb' dpkg-name: info: moved '8c5580c7ae6b55bc701e1fe53a05e8a4a48f86e4' to '/srv/rebuilderd/tmp/tmpgkh4wohc/sed_4.9-2_amd64.deb' dpkg-name: info: moved 'dc08393240cd1eb6cba97f4c848671b1bbe35551' to '/srv/rebuilderd/tmp/tmpltmk7yy6/libsmartcols1_2.41-4_amd64.deb' dpkg-name: info: moved 'be722047e5a5871712d9e0b163074900edd9f4e1' to '/srv/rebuilderd/tmp/tmph1ssnb09/r-bioc-biocgenerics_0.52.0-2_all.deb' dpkg-name: info: moved 'bed46e493d0ad74db6c16752a48c425d64b5bb92' to '/srv/rebuilderd/tmp/tmpjdi_2pxr/r-cran-r6_2.6.1-1_all.deb' dpkg-name: info: moved '60323f8664215da5e7d3c439eb948529efd87754' to '/srv/rebuilderd/tmp/tmpkpdkh7tw/r-bioc-delayedarray_0.32.0+dfsg-2_amd64.deb' dpkg-name: info: moved '7454f97adb4fe7a2687232ec1ff86c20a2f78529' to '/srv/rebuilderd/tmp/tmpz15tsvud/libgraphite2-3_1.3.14-2+b1_amd64.deb' dpkg-name: info: moved 'a343188918aea9e0ca88056d235d5d483f0d1ef4' to '/srv/rebuilderd/tmp/tmpe0q6lt6f/libsub-name-perl_0.28-1_amd64.deb' dpkg-name: info: moved '25e63837c1672ac9c7357d60be08886037a20a2b' to '/srv/rebuilderd/tmp/tmpaws9j33y/r-cran-matrixstats_1.5.0-1_amd64.deb' dpkg-name: info: moved '859f439847b6c17ded21ad8499c8e5e45d0a4f52' to '/srv/rebuilderd/tmp/tmpo1vq0pg5/libasan8_14.2.0-19_amd64.deb' dpkg-name: info: moved 'c05c22c6d6f5fa1fe15159159e6b1b7ab9a61158' to '/srv/rebuilderd/tmp/tmppm2qxkar/libclone-perl_0.47-1+b1_amd64.deb' dpkg-name: info: moved 'e59f918ef9e6c60b60e315905752c575c4b204f7' to '/srv/rebuilderd/tmp/tmpwttdn1ut/x11-common_7.7+24_all.deb' dpkg-name: info: moved 'e2dd45a3c223ab77978b2302940f1b958c189c94' to '/srv/rebuilderd/tmp/tmpz2z7gyhk/base-files_13.7_amd64.deb' dpkg-name: info: moved 'd9ac3d32319bd502abf2059b1d646cebb48bf2e5' to '/srv/rebuilderd/tmp/tmpk4co5oq_/automake_1.17-4_all.deb' dpkg-name: info: moved 'e04bbadaeedb99c0e6e8f6e0770cc840a895adeb' to '/srv/rebuilderd/tmp/tmpwehr5o_g/r-bioc-genomeinfodb_1.42.3+dfsg-1_all.deb' dpkg-name: info: moved '9cc6a691e8acacc7ab1f6ebeac2e9da3545659a4' to '/srv/rebuilderd/tmp/tmp9akh0ogn/libmagic1t64_5.46-5_amd64.deb' dpkg-name: info: moved '8b2853e52d50a8c2425dbb38843c5d07a8d17d62' to '/srv/rebuilderd/tmp/tmpalauiyez/libpng-dev_1.6.47-1.1_amd64.deb' dpkg-name: info: moved '273382c5e56614777ef78d42eb213ab1f55139b1' to '/srv/rebuilderd/tmp/tmp98p1sq2q/binutils-common_2.44-3_amd64.deb' dpkg-name: info: moved '5660b9f5233652f0771b66ff74ab46a426decd11' to '/srv/rebuilderd/tmp/tmpj6uf1wa9/r-cran-openssl_2.3.2+dfsg-1_amd64.deb' dpkg-name: info: moved '0869cea8b4dab4f2c31146246d634f4a579d5059' to '/srv/rebuilderd/tmp/tmpmvhg5jkm/libcurl3t64-gnutls_8.13.0-5_amd64.deb' dpkg-name: info: moved 'f90caa947938a8ba95c248a98f3e818e00501dbe' to '/srv/rebuilderd/tmp/tmpm6tzhu29/libgfortran5_14.2.0-19_amd64.deb' dpkg-name: info: moved '5bcff8ec16c718132cafc3898e9716388f6faaa3' to '/srv/rebuilderd/tmp/tmptimhgbyk/r-bioc-genomicranges_1.58.0+dfsg-2_amd64.deb' dpkg-name: info: moved '42593995a1400f50e78a3aae902b8300fac8c7e9' to '/srv/rebuilderd/tmp/tmpb4yet7w0/dctrl-tools_2.24-3+b1_amd64.deb' dpkg-name: info: moved '95311ea4ee9054ca9236ff503c03bd03a8c39634' to '/srv/rebuilderd/tmp/tmp0ro30363/libmodule-runtime-conflicts-perl_0.003-2_all.deb' dpkg-name: info: moved '42f47726ca619498a48aa3e67699637a75ef02aa' to '/srv/rebuilderd/tmp/tmp484v3329/libparams-classify-perl_0.015-2+b4_amd64.deb' dpkg-name: info: moved 'bf17a639aeed70052cf83cc714785508986b3e86' to '/srv/rebuilderd/tmp/tmp1886dtnp/libgfortran-14-dev_14.2.0-19_amd64.deb' dpkg-name: info: moved 'e4ba76930a27244845f51dbb53ecacf0c2f9356f' to '/srv/rebuilderd/tmp/tmp3dtfi4_2/r-cran-codetools_0.2-20-1_all.deb' dpkg-name: info: moved '8f34a82fd615f54fb58e0323eab7a9ec9ec88e06' to '/srv/rebuilderd/tmp/tmp60sdsmbu/r-bioc-genomeinfodbdata_1.2.13-2_all.deb' dpkg-name: info: moved 'aa243c859895c91f0fb48f4974a9d7b6b67065da' to '/srv/rebuilderd/tmp/tmpae3e8hbz/fonts-dejavu-mono_2.37-8_all.deb' dpkg-name: info: moved '1bd860f1b9bfbf1442147b4d032e272143fd49a7' to '/srv/rebuilderd/tmp/tmp4d8lr5ci/libclass-load-perl_0.25-2_all.deb' dpkg-name: info: moved '9acf73287584b4e492c3e57f43dcf191e4ec960c' to '/srv/rebuilderd/tmp/tmpnohnl4n8/libpangocairo-1.0-0_1.56.3-1_amd64.deb' dpkg-name: info: moved 'c0082b0bfe9227c700ea101beb56b183f4ea521e' to '/srv/rebuilderd/tmp/tmpk349k5j8/libalgorithm-c3-perl_0.11-2_all.deb' dpkg-name: info: moved '48405db7df8150615f1ba1f4bd3b160ac7f33d18' to '/srv/rebuilderd/tmp/tmp2_8gmdpu/libsm6_1.2.6-1_amd64.deb' dpkg-name: info: moved '816e8b1e4f5d0845fb01a1743a6f3de33395d0f5' to '/srv/rebuilderd/tmp/tmpcb5p_ra7/libsframe1_2.44-3_amd64.deb' dpkg-name: info: moved '8822ba59ddf9c816472154769d6cd2595ed91417' to '/srv/rebuilderd/tmp/tmpbpk406ut/libpam-runtime_1.7.0-3_all.deb' dpkg-name: info: moved '20beb35a40d87319e7cc17efd2d60c24f6e43c18' to '/srv/rebuilderd/tmp/tmp5jnc_bdk/libcurl4t64_8.13.0-5_amd64.deb' dpkg-name: info: moved '56e21dcef138ba28b011f05a10d04c2589b8fe28' to '/srv/rebuilderd/tmp/tmpd_cr8p_a/libsharpyuv0_1.5.0-0.1_amd64.deb' dpkg-name: info: moved 'fd240f868359b280c062867cd17c075522343b4a' to '/srv/rebuilderd/tmp/tmpbkcuagyb/libwww-curl-simple-perl_0.100191-3_all.deb' dpkg-name: info: moved '537c47a3d6cda3b7d09e534a3304b4c7501893c3' to '/srv/rebuilderd/tmp/tmpygfg9usd/hostname_3.25_amd64.deb' dpkg-name: info: moved 'f442e53233cb43d7c9d108051d76a73cfd48e473' to '/srv/rebuilderd/tmp/tmplc9rro2k/libtext-wrapi18n-perl_0.06-10_all.deb' dpkg-name: info: moved 'cccf00e6f476058c45604f0b0599d4a62a578469' to '/srv/rebuilderd/tmp/tmp0sp5w10y/libpcre2-16-0_10.45-1_amd64.deb' dpkg-name: info: moved 'e0df83113384442c8973fe35be13326370c99fd8' to '/srv/rebuilderd/tmp/tmp8_wwqc5c/zlib1g-dev_1.3.dfsg+really1.3.1-1+b1_amd64.deb' dpkg-name: info: moved 'bb093989f7535851cee6851f7ae33f2a129a6302' to '/srv/rebuilderd/tmp/tmpwjnq5l03/autoconf_2.72-3.1_all.deb' dpkg-name: info: moved '2ea74f213066e97c665c02b2e26697d168182eaa' to '/srv/rebuilderd/tmp/tmp2dytnis3/libblas-dev_3.12.1-2_amd64.deb' dpkg-name: info: moved '5f6ebeaf117c9a03447edc15ef90d60d34b41d86' to '/srv/rebuilderd/tmp/tmpzby6g5au/r-cran-futile.logger_1.4.3-4_all.deb' dpkg-name: info: moved 'd7440d194dd1142be8833d6167253ed019abd015' to '/srv/rebuilderd/tmp/tmpj5c8259z/libpixman-1-0_0.44.0-3_amd64.deb' dpkg-name: info: moved '7be5c58d2594133d0fa1dd5c9f7b8a7d2cd087c8' to '/srv/rebuilderd/tmp/tmp71z0ht4z/libwebp7_1.5.0-0.1_amd64.deb' Downloading dependency 1 of 366: libdb5.3t64:amd64=5.3.28+dfsg2-9 Downloading dependency 2 of 366: cpp-x86-64-linux-gnu:amd64=4:14.2.0-1 Downloading dependency 3 of 366: libselinux1:amd64=3.8.1-1 Downloading dependency 4 of 366: 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Downloading dependency 127 of 366: r-bioc-s4arrays:amd64=1.6.0+dfsg-2dpkg-name: info: moved 'cda4ffb8743b8d5e1c9fb0e3e76dbbd228de08fa' to '/srv/rebuilderd/tmp/tmpht1hhw0s/r-bioc-s4arrays_1.6.0+dfsg-2_amd64.deb' dpkg-name: info: moved '5ab99fde8b6c1bb93fe4df598eec4eedde72b6da' to '/srv/rebuilderd/tmp/tmpegvno23v/fontconfig_2.15.0-2.3_amd64.deb' dpkg-name: info: moved '8212065c80c91a05839e26821dc65088f4ffe67d' to '/srv/rebuilderd/tmp/tmppvhxc16s/libgdbm6t64_1.24-2_amd64.deb' dpkg-name: info: moved '9557c1b46f6f1ad89af8c586612e8d4efd080a4b' to '/srv/rebuilderd/tmp/tmp_dztp1wk/libxml2_2.12.7+dfsg+really2.9.14-0.4_amd64.deb' dpkg-name: info: moved 'c4e582026462e0b58feb8e4849b0804a3e15ebaf' to '/srv/rebuilderd/tmp/tmp36xw6_c1/libjpeg62-turbo_2.1.5-3.1_amd64.deb' dpkg-name: info: moved 'd1922ab37a3b1d767c0176cd192b3540359ee444' to '/srv/rebuilderd/tmp/tmpr2tt3e25/debconf_1.5.91_all.deb' dpkg-name: info: moved 'c5ed25322e0e478f39823c821a1ec408486e6079' to '/srv/rebuilderd/tmp/tmppyus2_cy/ncurses-base_6.5+20250216-2_all.deb' dpkg-name: info: moved '69db96c0518c282551e49d67e29819941fa4f7c4' to '/srv/rebuilderd/tmp/tmpd0_ejlld/libarchive-zip-perl_1.68-1_all.deb' dpkg-name: info: moved '3b53369564ae02cd1b78981be0b68c0f5eb44934' to '/srv/rebuilderd/tmp/tmpsbtubwhq/libdeflate-dev_1.23-2_amd64.deb' dpkg-name: info: moved '20e45f847eb9c2433ff936af7d3e425abb6c6390' to '/srv/rebuilderd/tmp/tmp7sk3qk_y/gcc-14-base_14.2.0-19_amd64.deb' dpkg-name: info: moved 'f6b0d5bc10135d7427e6164ea170bb1203941e59' to '/srv/rebuilderd/tmp/tmpl6kxsftl/binutils_2.44-3_amd64.deb' dpkg-name: info: moved '71f2f41f5570ca3482ffb5db97b34f46c6f42b65' to '/srv/rebuilderd/tmp/tmpmmzxmm2g/libtinfo6_6.5+20250216-2_amd64.deb' dpkg-name: info: moved '2009337b0d42ff7bb2e102655962e3ede6e3c53a' to '/srv/rebuilderd/tmp/tmpmd5ffjpc/libuchardet0_0.0.8-1+b2_amd64.deb' dpkg-name: info: moved 'fb0d8bea0ba6659624410e3671e934ab564e283e' to '/srv/rebuilderd/tmp/tmpiofsydxx/libcap-ng0_0.8.5-4+b1_amd64.deb' dpkg-name: info: moved '0a64b9bc26c1de98f5080aef6e35e6abb25c2a0d' to '/srv/rebuilderd/tmp/tmp7ypi1x0h/libncurses6_6.5+20250216-2_amd64.deb' dpkg-name: info: moved '519e4ffbb01aeefa404f227fcf2577e1185d80aa' to '/srv/rebuilderd/tmp/tmpugc9yrea/libtsan2_14.2.0-19_amd64.deb' dpkg-name: info: moved '89ab95a64c9d0c1c7962c4dc664b85594965e62b' to '/srv/rebuilderd/tmp/tmp6p4drz_q/libdata-optlist-perl_0.114-1_all.deb' dpkg-name: info: moved 'a9ee4cf4a67fed357816ba936634cafc8c282d76' to '/srv/rebuilderd/tmp/tmplfn1uizy/r-base-core_4.5.0-2_amd64.deb' dpkg-name: info: moved '63f1d1dfe27c54257297c70aad3862682e09d0fd' to '/srv/rebuilderd/tmp/tmpn19__4l7/libxdmcp6_1.1.5-1_amd64.deb' dpkg-name: info: moved '3eafb35668e2ab4820541fb1664fd7f5a13f7ae3' to '/srv/rebuilderd/tmp/tmpekniaaqf/libtirpc-dev_1.3.6+ds-1_amd64.deb' dpkg-name: info: moved '99e29af393d5a417cd3bd21d13011c6740844c4a' to '/srv/rebuilderd/tmp/tmpxi40mikg/libpam-modules_1.7.0-3_amd64.deb' dpkg-name: info: moved '1fd953c5b58614f17dce0aaa8ace2444ece520bc' to '/srv/rebuilderd/tmp/tmpgv_6_sf3/liblapack3_3.12.1-2_amd64.deb' dpkg-name: info: moved '6a3a97b4a3c2cbe776d9bfc5a8adf182a164558e' to '/srv/rebuilderd/tmp/tmpijvr3mix/libtiff6_4.7.0-3_amd64.deb' dpkg-name: info: moved '96dbb7ea8dced3367f661f31964693f4919c0f9a' to '/srv/rebuilderd/tmp/tmpylcdk7mj/libzstd1_1.5.7+dfsg-1_amd64.deb' dpkg-name: info: moved '95a1ad7f4e10da80d003f4383895db21d85aef82' to '/srv/rebuilderd/tmp/tmp8473o_lc/mawk_1.3.4.20250131-1_amd64.deb' dpkg-name: info: moved '6406f3766eeff59d81b414575ab0f966e8de836a' to '/srv/rebuilderd/tmp/tmpq6ukgjsa/libblkid1_2.41-4_amd64.deb' dpkg-name: info: moved '024da9a3b086be035775bb9a3f9487e9721d8f40' to '/srv/rebuilderd/tmp/tmpzef6ini9/r-bioc-biocio_1.16.0+dfsg-2_all.deb' dpkg-name: info: moved '51c8c4bbbb1b29dd6a53bf07a92a365bdad34b8a' to '/srv/rebuilderd/tmp/tmpn1n5br9k/gfortran_14.2.0-1_amd64.deb' 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'a1f3edfc9367fa57d0bb09f81b86853ece2d5d15' to '/srv/rebuilderd/tmp/tmppnpxviax/build-essential_12.12_amd64.deb' dpkg-name: info: moved '548991cb0fdffc7be38693f9a164113d0f3dde07' to '/srv/rebuilderd/tmp/tmpm74x37f9/libio-html-perl_1.004-3_all.deb' dpkg-name: info: moved '2ba00f7daaef0e1144f71dabcae428d0b2838787' to '/srv/rebuilderd/tmp/tmpq4tu1nwv/libngtcp2-crypto-gnutls8_1.11.0-1_amd64.deb' dpkg-name: info: moved '1b14105de465e270f54b34743eaa6615338b4461' to '/srv/rebuilderd/tmp/tmpkbw68qou/r-cran-lattice_0.22-7-1_amd64.deb' dpkg-name: info: moved 'a729442bb25a09aa9f3fa19d540b1abb3ce1c17a' to '/srv/rebuilderd/tmp/tmp8rmckl8l/base-passwd_3.6.7_amd64.deb' dpkg-name: info: moved '3617bde7a7571de051ea98d57a978f3a357631a3' to '/srv/rebuilderd/tmp/tmpypamjqzf/libxau6_1.0.11-1_amd64.deb' dpkg-name: info: moved '2b1ff33f18d295d06d1dfe4cbd51fb730157cd63' to '/srv/rebuilderd/tmp/tmph76rjpfx/gcc-14-x86-64-linux-gnu_14.2.0-19_amd64.deb' dpkg-name: info: moved '95f56c3a7efa2ced4ef1a4bbe5e698bc3b8fd404' to '/srv/rebuilderd/tmp/tmp6j0wd85y/libsub-install-perl_0.929-1_all.deb' dpkg-name: info: moved 'de29e541c6398dde3fa1bddc01dae89b95f103b5' to '/srv/rebuilderd/tmp/tmp3k2l6dnx/g++-14_14.2.0-19_amd64.deb' dpkg-name: info: moved '3e6f1f038dd77c8681e5b4e10e1b8dd932737598' to '/srv/rebuilderd/tmp/tmpvwgg3ht3/unzip_6.0-29_amd64.deb' dpkg-name: info: moved '150afad071e8968436aaef066ec3c66082abedf6' to '/srv/rebuilderd/tmp/tmppmjpupxu/libbinutils_2.44-3_amd64.deb' dpkg-name: info: moved 'd4657962ca3a903c5f26f0d7f2b1a46b5d7ec6c0' to '/srv/rebuilderd/tmp/tmpv2lz7ne1/libaudit-common_4.0.2-2_all.deb' dpkg-name: info: moved 'fe9bb2a40a8aa3f28df64b20dc72b8ec08e80d30' to '/srv/rebuilderd/tmp/tmpvlhkpjzc/autopoint_0.23.1-2_all.deb' dpkg-name: info: moved '1e2be10fe484cd4b6c6fbded82e09ab216d07019' to '/srv/rebuilderd/tmp/tmph1_kv_qe/liblzma5_5.8.1-1_amd64.deb' dpkg-name: info: moved 'ecbd1400fd55b23bfd93f5850f2d0b019261ccab' to '/srv/rebuilderd/tmp/tmpyeilnd12/libb-hooks-endofscope-perl_0.28-1_all.deb' dpkg-name: info: moved '222c3386ae357d03f576326f607f582c76838fdc' to '/srv/rebuilderd/tmp/tmpyizpjx_s/r-cran-askpass_1.2.1-1_amd64.deb' dpkg-name: info: moved 'fd53cdac1915e15c3bf6ce9d36daa948e455bf10' to '/srv/rebuilderd/tmp/tmpnnlordw1/libtext-charwidth-perl_0.04-11+b4_amd64.deb' dpkg-name: info: moved 'ca72c37ff19b901b427ab9489e6baa6894a95577' to '/srv/rebuilderd/tmp/tmp1je5h71_/libbz2-dev_1.0.8-6_amd64.deb' dpkg-name: info: moved '00e0c4572181281e7bb5597e64e12471803728ad' to '/srv/rebuilderd/tmp/tmpcslp25nn/r-bioc-iranges_2.40.1-3_amd64.deb' dpkg-name: info: moved 'fc9d1247247dd8d4e0e231b26ff01fe7509a55f1' to '/srv/rebuilderd/tmp/tmppi3pxefs/libxcb1_1.17.0-2+b1_amd64.deb' dpkg-name: info: moved '3382fc0968af380b8966d46342738234478b4c95' to '/srv/rebuilderd/tmp/tmpf5nm8joc/libtirpc3t64_1.3.6+ds-1_amd64.deb' dpkg-name: info: moved '784fb94aa5dde084a04630908e2d1b60f5784797' to '/srv/rebuilderd/tmp/tmpidloxfwa/r-cran-formatr_1.14-2_all.deb' dpkg-name: info: moved 'c985dc67d0596293d22a6c050b33fcb78d30326f' to '/srv/rebuilderd/tmp/tmpdyq1t98s/po-debconf_1.0.21+nmu1_all.deb' dpkg-name: info: moved 'cbf0f5fd9ed6cd08f04dc15d386f376fd1c13534' to '/srv/rebuilderd/tmp/tmpmigzx2po/man-db_2.13.0-1_amd64.deb' dpkg-name: info: moved 'ea9db04001b6b65ec9d11b4696f6548855902801' to '/srv/rebuilderd/tmp/tmp7j_ha428/liblerc4_4.0.0+ds-5_amd64.deb' dpkg-name: info: moved '2782000647a715362c32149319a685f939442dae' to '/srv/rebuilderd/tmp/tmp2u7xtehn/util-linux_2.41-4_amd64.deb' dpkg-name: info: moved '510fbc305d8dc86f0279c13f77fa06c4c1a6c75f' to '/srv/rebuilderd/tmp/tmpfgp7fcgd/libkeyutils1_1.6.3-6_amd64.deb' dpkg-name: info: moved '3680d84faa85fa090a565693365712680b9e5be6' to '/srv/rebuilderd/tmp/tmpozcy_so_/libcrypt1_4.4.38-1_amd64.deb' dpkg-name: info: moved '08612d442cee2b50cf70857653ee84f1aa68c98f' to '/srv/rebuilderd/tmp/tmpaiv1ccfn/libdpkg-perl_1.22.18_all.deb' dpkg-name: 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'4d344d8bcb21f660ca3b4dad77b975f047b0b29e' to '/srv/rebuilderd/tmp/tmpjja4thjm/libnghttp2-14_1.64.0-1.1_amd64.deb' dpkg-name: info: moved 'd1afdc48ff8bb2772c41172aa137d414402d51b0' to '/srv/rebuilderd/tmp/tmp_mhmxw61/libperl5.40_5.40.1-3_amd64.deb' dpkg-name: info: moved '84f251dec178be15b895bfdd9c563ed60160ba3f' to '/srv/rebuilderd/tmp/tmp5iuvfqor/r-cran-lambda.r_1.2.4-2_all.deb' dpkg-name: info: moved 'f29fa2693403dbecd6cb1edc4ab3d8b201301195' to '/srv/rebuilderd/tmp/tmp20nd28l6/r-bioc-rtracklayer_1.66.0-3_amd64.deb' dpkg-name: info: moved '89bdd8bf064018531f12aab495c0a6f2240bed6a' to '/srv/rebuilderd/tmp/tmpkg07yzmo/libgssapi-krb5-2_1.21.3-5_amd64.deb' dpkg-name: info: moved '976319bbd1e9b067c8abe5d8724606b8fb5738cb' to '/srv/rebuilderd/tmp/tmpghoe415r/libssh2-1t64_1.11.1-1_amd64.deb' dpkg-name: info: moved '9a5f16d514fa20032b674b0e0fb2a55e5b077603' to '/srv/rebuilderd/tmp/tmpm1f77jam/g++-14-x86-64-linux-gnu_14.2.0-19_amd64.deb' dpkg-name: info: moved '7d24c6a7f0551aa403140a9e8deaf5c2df47faae' to '/srv/rebuilderd/tmp/tmpuf18azhz/groff-base_1.23.0-7_amd64.deb' dpkg-name: info: moved 'e2b9ac2d0ea0bb8e1bee2418aba1c592f9c7d5ba' to '/srv/rebuilderd/tmp/tmpit7u2qsn/libgprofng0_2.44-3_amd64.deb' dpkg-name: info: moved '0547e3caf3f62a87b24283918a3099fcd39804ad' to '/srv/rebuilderd/tmp/tmpk42r_wf1/libdist-checkconflicts-perl_0.11-2_all.deb' dpkg-name: info: moved 'd4d9826409b4f834f9f354b9156cf22c2288595d' to '/srv/rebuilderd/tmp/tmphm7hw6ns/libzstd-dev_1.5.7+dfsg-1_amd64.deb' dpkg-name: info: moved '703a8577b17b52095c1af5c01842e1b18e7aedb5' to '/srv/rebuilderd/tmp/tmpz58pj9aq/libtirpc-common_1.3.6+ds-1_all.deb' dpkg-name: info: moved 'bcd8cee1738cf4727b6705b4c1609641189591e0' to '/srv/rebuilderd/tmp/tmp1as3j0nc/libfontconfig1_2.15.0-2.3_amd64.deb' dpkg-name: info: moved '5df086deac5b9360edd382fbeda98aedd8207f49' to '/srv/rebuilderd/tmp/tmpqrwna0zd/libtry-tiny-perl_0.32-1_all.deb' dpkg-name: info: moved 'f9458461ce861552a4d173ad8e5b504c957efc68' to '/srv/rebuilderd/tmp/tmp5il9kmd3/binutils-x86-64-linux-gnu_2.44-3_amd64.deb' dpkg-name: info: moved '5538f67b2d074913b64d9178d96da947f20b42de' to '/srv/rebuilderd/tmp/tmppg2pc9h3/libfreetype6_2.13.3+dfsg-1_amd64.deb' dpkg-name: info: moved 'c96a686c3966060959f6aa9296ed779feb67ebf9' to '/srv/rebuilderd/tmp/tmp5gg6xj7a/liblastlog2-2_2.41-4_amd64.deb' dpkg-name: info: moved 'a0ef37aac3d7e82078b20aab895985693d0df628' to '/srv/rebuilderd/tmp/tmplh9cnsc6/pkgconf-bin_1.8.1-4_amd64.deb' dpkg-name: info: moved '9e7858159e8efd9307100982fa4b277b27924cd7' to '/srv/rebuilderd/tmp/tmp1pf9kra0/libdatrie1_0.2.13-3+b1_amd64.deb' dpkg-name: info: moved '5d47fff6eebd2e60acb353cef3cb59fea9063dce' to '/srv/rebuilderd/tmp/tmpcoclscxc/liblwp-mediatypes-perl_6.04-2_all.deb' dpkg-name: info: moved 'd0a879d8e5ca6df8ce789d2a8bd9435afe2fd69a' to '/srv/rebuilderd/tmp/tmpjjtw5tu0/r-cran-crayon_1.5.3-1_all.deb' dpkg-name: info: moved '556a0ae1af08f099880757b6fb6920f6a584cb84' to '/srv/rebuilderd/tmp/tmpekwvso1z/r-cran-xml_3.99-0.18-1_amd64.deb' dpkg-name: info: moved '9581fae9cbf1bb9b8e9c59405f71259c5bb8524f' to '/srv/rebuilderd/tmp/tmpnr2oxs76/libgcc-14-dev_14.2.0-19_amd64.deb' dpkg-name: info: moved '130fe629bc1e87d51d2dda68bbc6107687d206a2' to '/srv/rebuilderd/tmp/tmpgg6keptq/libexpat1_2.7.1-1_amd64.deb' dpkg-name: info: moved 'e26a84b05448e96717593c0257a9055f82a6ec42' to '/srv/rebuilderd/tmp/tmpgxnhp3i9/libthai0_0.1.29-2+b1_amd64.deb' dpkg-name: info: moved 'ed5d2f1fa5b7952d917ccc401f5785ff4744e544' to '/srv/rebuilderd/tmp/tmpd3b5wu4o/gettext-base_0.23.1-2_amd64.deb' dpkg-name: info: moved 'b97f916891a4822986d2fa16454e975579e0364a' to '/srv/rebuilderd/tmp/tmp5t4ded9f/gfortran-x86-64-linux-gnu_14.2.0-1_amd64.deb' dpkg-name: info: moved '18f04b1aa4b3f4186ee9067925451d5574118505' to '/srv/rebuilderd/tmp/tmptqcbnzrq/libpcre2-8-0_10.45-1_amd64.deb' dpkg-name: info: moved '5f7efae3aaee1f95071753df0c93cccb7103348b' to '/srv/rebuilderd/tmp/tmp6f7q527a/libpaper-utils_2.2.5-0.3+b2_amd64.deb' dpkg-name: info: moved '60de5d3d955e4ec6ffc31ab0dfcc9e7e2b7f9ee1' to '/srv/rebuilderd/tmp/tmphiaffgmb/libwww-curl-perl_4.17-12_amd64.deb' dpkg-name: info: moved 'fccb158fb27f5c47ee688dfaf35fb3695fb62031' to '/srv/rebuilderd/tmp/tmpmlk1l8d5/gfortran-14_14.2.0-19_amd64.deb' dpkg-name: info: moved '5e56edf7ab85950c576bb13a178311dde08a888b' to '/srv/rebuilderd/tmp/tmplpnmi2tp/file_5.46-5_amd64.deb' dpkg-name: info: moved 'e86254993275a1e69d460ea8b8e54e328246dc89' to '/srv/rebuilderd/tmp/tmp9d8knojd/libc-dev-bin_2.41-7_amd64.deb' dpkg-name: info: moved 'f006b673abdf59ec8bc25d2e3c99101e65c75a29' to '/srv/rebuilderd/tmp/tmpjx7f77_b/init-system-helpers_1.68_all.deb' dpkg-name: info: moved 'bdc0b54ff7f971ecd56ae54aea604d2ab0e47aaf' to '/srv/rebuilderd/tmp/tmpzbb7r3w4/libgcc-s1_14.2.0-19_amd64.deb' dpkg-name: info: moved 'e5b70fdcf48a8da743384a7358c21c7a1e3c673f' to '/srv/rebuilderd/tmp/tmpzp5eysmu/libdebhelper-perl_13.24.2_all.deb' dpkg-name: info: moved '3003d7ee20f8100b1c4064f06db3347479a45468' to '/srv/rebuilderd/tmp/tmpzg8s6xxq/ca-certificates_20250419_all.deb' dpkg-name: info: moved '1ed2cd061aa54f2e2d75113b24676ddcac022d84' to '/srv/rebuilderd/tmp/tmp2w35evh1/libsqlite3-0_3.46.1-3_amd64.deb' dpkg-name: info: moved '131d38c5fea49d2fcd5d20216e64f310775bc2a0' to '/srv/rebuilderd/tmp/tmpd6_xst0u/linux-libc-dev_6.12.25-1_all.deb' dpkg-name: info: moved 'c6af572fe9fca655178e43e1f6023fa77e8d784d' to '/srv/rebuilderd/tmp/tmpshupy7h9/r-cran-sys_3.4.3-1_amd64.deb' dpkg-name: info: moved '6767b0db3a8873143b0db385102415f960318f77' to '/srv/rebuilderd/tmp/tmpc1d56gxl/libpango-1.0-0_1.56.3-1_amd64.deb' dpkg-name: info: moved '574f2968f90c0e4622fc6a081ab5f35316f3de8b' to '/srv/rebuilderd/tmp/tmp8bswp0fk/r-cran-abind_1.4-8-1_all.deb' Downloading dependency 128 of 366: fontconfig:amd64=2.15.0-2.3 Downloading dependency 129 of 366: libgdbm6t64:amd64=1.24-2 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Downloading dependency 254 of 366: r-cran-abind:amd64=1.4-8-1 Downloading dependency 255 of 366: libx11-6:amd64=2:1.8.12-1dpkg-name: info: moved '56ae4d0487891c46be6f33fb030c750950259511' to '/srv/rebuilderd/tmp/tmp224byk_v/libx11-6_1.8.12-1_amd64.deb' dpkg-name: info: moved '78687aee7dbf56e1f0fcc7c9b6bfb5b3850f31bc' to '/srv/rebuilderd/tmp/tmp4h1179ym/libboost-dev_1.83.0.2+b2_amd64.deb' dpkg-name: info: moved 'a478fbcba038f4a18db43b9771ee01a7da5ab23c' to '/srv/rebuilderd/tmp/tmp2u4bdwzw/libatomic1_14.2.0-19_amd64.deb' dpkg-name: info: moved '0167929bc1df456a6491de90b1f861fb0b6a4e89' to '/srv/rebuilderd/tmp/tmpe8yptcgg/readline-common_8.2-6_all.deb' dpkg-name: info: moved 'd2e596064e9b871c11f836b9f43886b0cf172c9d' to '/srv/rebuilderd/tmp/tmprgxs_yu9/bsdutils_2.41-4_amd64.deb' dpkg-name: info: moved '58218d5fd111e985646c0d8d109cf64162796716' to '/srv/rebuilderd/tmp/tmpm4gipou7/dh-autoreconf_20_all.deb' dpkg-name: info: moved '1d47b6af368facc2d560a7eaa2f827aea5671aba' to '/srv/rebuilderd/tmp/tmpq596n6dy/libisl23_0.27-1_amd64.deb' dpkg-name: info: moved '23aea262d2c56a31d6557ffe3c1a23c77772d304' to '/srv/rebuilderd/tmp/tmpspfjd0xy/gcc_14.2.0-1_amd64.deb' dpkg-name: info: moved '9b0e095dfb189b00efa9bbcba2f71c2f5c004ef4' to '/srv/rebuilderd/tmp/tmpx9e81mvu/icu-devtools_76.1-3_amd64.deb' dpkg-name: info: moved 'd91483c04c916f43fccfa9983cdba5ee38025b84' to '/srv/rebuilderd/tmp/tmpimex536m/libk5crypto3_1.21.3-5_amd64.deb' dpkg-name: info: moved '53f2b0612c8ed8a60970f9a206ae65eb84681f6e' to '/srv/rebuilderd/tmp/tmprn1jszso/libacl1_2.3.2-2+b1_amd64.deb' dpkg-name: info: moved 'a985c2d441f76d244fae3ba3262a44d4f4aed446' to '/srv/rebuilderd/tmp/tmpfhxfir3u/r-cran-bitops_1.0-9-1_amd64.deb' dpkg-name: info: moved '8afa39276bddd281c742e2461a4e797aff4ddc31' to '/srv/rebuilderd/tmp/tmphwvxblir/r-cran-futile.options_1.0.1-3_all.deb' dpkg-name: info: moved '134415294f4601b2ce95266d1b5bcd9632ef8e4a' to '/srv/rebuilderd/tmp/tmp6bqlvxe2/patch_2.8-1_amd64.deb' dpkg-name: 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'/srv/rebuilderd/tmp/tmp1d4wgheq/libitm1_14.2.0-19_amd64.deb' dpkg-name: info: moved 'a830bfa510bbc8d8e0e4fe2a0809550251dd7f6d' to '/srv/rebuilderd/tmp/tmp7_ktea38/libudev1_257.5-2_amd64.deb' dpkg-name: info: moved '668800d5f7cb8286a36dbcf9610d72ad4091ae5b' to '/srv/rebuilderd/tmp/tmp8sbi7uvb/libthai-data_0.1.29-2_all.deb' dpkg-name: info: moved '3c39a159d523a2c34ea1834d7dad04c3fcfb4a9b' to '/srv/rebuilderd/tmp/tmpc4k0drxr/dh-r_20241218_all.deb' dpkg-name: info: moved '2844c4b2cf59b0cdaabf71092330b3becdc32556' to '/srv/rebuilderd/tmp/tmpghjaebbh/libtool_2.5.4-4_all.deb' dpkg-name: info: moved '0ae76d73fc4249360765013225c3408eb5ca6518' to '/srv/rebuilderd/tmp/tmpt52wx9j4/libcap2_2.75-7_amd64.deb' dpkg-name: info: moved 'a8780caa8a5b791e8005e631530cf83a75376f9c' to '/srv/rebuilderd/tmp/tmpg42utrj6/coreutils_9.7-2_amd64.deb' dpkg-name: info: moved '12b4b1da432f3ebe2f166faf375426efac467d38' to '/srv/rebuilderd/tmp/tmp6q3dde45/libssl3t64_3.5.0-1_amd64.deb' dpkg-name: info: moved '376c8d2c6afc249c30d4e24123bda5504294cb6c' to '/srv/rebuilderd/tmp/tmppxfzn_qw/libxext6_1.3.4-1+b3_amd64.deb' dpkg-name: info: moved '5635bb60438f44af86da35a1c358288138bed3e6' to '/srv/rebuilderd/tmp/tmpj7kgthlf/r-bioc-rsamtools_2.22.0+dfsg-2_amd64.deb' dpkg-name: info: moved '9c4366e4fe4d151aef20ec7059fe79f8a6cfbdce' to '/srv/rebuilderd/tmp/tmp2r2km1bh/cpp-14-x86-64-linux-gnu_14.2.0-19_amd64.deb' dpkg-name: info: moved '71836091317421d399f7961093c95f4a1861ba92' to '/srv/rebuilderd/tmp/tmp5w5vwo3h/libquadmath0_14.2.0-19_amd64.deb' dpkg-name: info: moved '6114871860fdebba908748088303cd83bd1f8ad8' to '/srv/rebuilderd/tmp/tmppwjfw2zq/gfortran-14-x86-64-linux-gnu_14.2.0-19_amd64.deb' dpkg-name: info: moved '99eade0456a55035ce891d7f85cb620b0dcd7871' to '/srv/rebuilderd/tmp/tmpj3pejcqj/libgdbm-compat4t64_1.24-2_amd64.deb' dpkg-name: info: moved '082559e663a78f9a7bf294ad1fcec84f8bda4f43' to '/srv/rebuilderd/tmp/tmpqn7fs07j/libngtcp2-16_1.11.0-1_amd64.deb' dpkg-name: info: moved 'be1764f701ea88789e9ee6d31217b9d916019d87' to '/srv/rebuilderd/tmp/tmpcp1k7nq_/r-bioc-sparsearray_1.6.2+dfsg-2_amd64.deb' dpkg-name: info: moved '24123b32b6afb1f186a31ab8a2175dc438558653' to '/srv/rebuilderd/tmp/tmpt_ui_xac/libseccomp2_2.6.0-2_amd64.deb' dpkg-name: info: moved '6f2e2025e6d098cffc150e28ffeda1af34bf729d' to '/srv/rebuilderd/tmp/tmpwp9kwgr2/r-bioc-matrixgenerics_1.18.1-1_all.deb' dpkg-name: info: moved 'a4eab172138103db836568a126391383756bef89' to '/srv/rebuilderd/tmp/tmp7hrk9kna/perl_5.40.1-3_amd64.deb' dpkg-name: info: moved 'ddaabf84c98ab32185e16b0dcf032b1eba34ba81' to '/srv/rebuilderd/tmp/tmpd4w0ydfe/libglib2.0-0t64_2.84.1-2_amd64.deb' dpkg-name: info: moved '22d70a0fdb62bb5301a59e3cf0b5ce66f3868009' to '/srv/rebuilderd/tmp/tmpivzfbfb4/make_4.4.1-2_amd64.deb' dpkg-name: info: moved '5eb1f900f46b7787fee2082e3bcb32ed09ccaba6' to '/srv/rebuilderd/tmp/tmpr66jp4zk/sensible-utils_0.0.25_all.deb' dpkg-name: info: moved 'b19fc49b12bbd4549d1f69fa71dfc8d6cbcb9a74' to '/srv/rebuilderd/tmp/tmpek69dgpu/xz-utils_5.8.1-1_amd64.deb' dpkg-name: info: moved 'd33dd3ff8f88f8ae9a84bad1df925ea1b2ea0904' to '/srv/rebuilderd/tmp/tmpxzkqbk23/libsasl2-2_2.1.28+dfsg1-9_amd64.deb' dpkg-name: info: moved '726425792bfc4b1b3319367265b69e591afe0261' to '/srv/rebuilderd/tmp/tmpnwtj59hg/architecture-properties_0.2.6_amd64.deb' dpkg-name: info: moved 'a4de19585b88f367cc983002e28820af8e9f129c' to '/srv/rebuilderd/tmp/tmpp9oqn7h0/libdeflate0_1.23-2_amd64.deb' dpkg-name: info: moved 'be64e3d91cbba7df5603bcd731b1c4cf344fd12d' to '/srv/rebuilderd/tmp/tmpd64_ojfu/openssl_3.5.0-1_amd64.deb' dpkg-name: info: moved '8c66ab6412351683261d50959984811c0480087b' to '/srv/rebuilderd/tmp/tmpqczc1g_k/libsasl2-modules-db_2.1.28+dfsg1-9_amd64.deb' dpkg-name: info: moved 'e9ead5081c3b70e5b5831f6324910c883dd7ef40' to '/srv/rebuilderd/tmp/tmp41kbxwh9/g++-x86-64-linux-gnu_14.2.0-1_amd64.deb' dpkg-name: info: moved 'cd16c2700ce34ea9d02eff4a8c38fe189a5bc93a' to '/srv/rebuilderd/tmp/tmpwbwv4aqf/libjpeg62-turbo-dev_2.1.5-3.1_amd64.deb' dpkg-name: info: moved '5d08aecad44b86d892ea77f39125d4e28706e8df' to '/srv/rebuilderd/tmp/tmp2bef47xu/libpangoft2-1.0-0_1.56.3-1_amd64.deb' dpkg-name: info: moved 'd7cc66c713ee3a13713f3dffaec4e2b9fa43ffe2' to '/srv/rebuilderd/tmp/tmp6x3q5867/libbz2-1.0_1.0.8-6_amd64.deb' dpkg-name: info: moved 'f03fd2e9780012bf0c4fb68eccc7701d54b14e19' to '/srv/rebuilderd/tmp/tmp92nznwok/libkrb5support0_1.21.3-5_amd64.deb' dpkg-name: info: moved '1a9c47795cced7a9d127410e56164bf9ff76e83e' to '/srv/rebuilderd/tmp/tmpphdliz_j/r-bioc-genomicalignments_1.42.0-2_amd64.deb' dpkg-name: info: moved '24a66af9695012690ab65031b8021d8ae77f9f9e' to '/srv/rebuilderd/tmp/tmpsohht5xb/libxss1_1.2.3-1+b3_amd64.deb' dpkg-name: info: moved '893ce13de17a5f241dff5ac9fd79a5a92e41ced1' to '/srv/rebuilderd/tmp/tmpeec76euw/libmagic-mgc_5.46-5_amd64.deb' dpkg-name: info: moved '51d0abf121d9fb10e9d8a9ce6b78c93b84152297' to '/srv/rebuilderd/tmp/tmp54u53_7e/libcairo2_1.18.4-1+b1_amd64.deb' dpkg-name: info: moved 'eb369aacf6dd6ae54fefdbed4e4fe9775e07227c' to '/srv/rebuilderd/tmp/tmppkggw0dj/libjbig0_2.1-6.1+b2_amd64.deb' dpkg-name: info: moved '0b1fdf1baf48d943b98b670aa57dc748fd000e5b' to '/srv/rebuilderd/tmp/tmpwjxy_vt1/liburi-perl_5.30-1_all.deb' dpkg-name: info: moved '36425f4bebbc340e75958cfd12b5f56c34173b46' to '/srv/rebuilderd/tmp/tmpb80n0u5c/libtcl8.6_8.6.16+dfsg-1_amd64.deb' dpkg-name: info: moved '3ffde3f07f58b30dc5e8d5e3461362cd55435948' to '/srv/rebuilderd/tmp/tmpubgp6qm1/libsub-exporter-progressive-perl_0.001013-3_all.deb' dpkg-name: info: moved '94694566461cb64aaa0dd2bfa8020958a5ec0a9e' to '/srv/rebuilderd/tmp/tmphy3gd546/libxcb-render0_1.17.0-2+b1_amd64.deb' dpkg-name: info: moved '782a3b1b797968befd0144b8428ca069a4241cec' to '/srv/rebuilderd/tmp/tmpj6yqypgv/libc-bin_2.41-7_amd64.deb' dpkg-name: info: moved '7791f7c6ff038c7fad4677f8ce9be34d80f25284' to '/srv/rebuilderd/tmp/tmptu1ckus7/libx11-data_1.8.12-1_all.deb' dpkg-name: info: moved 'c443c0c0f2742f280607b603b6d62a2ae6c2743d' to '/srv/rebuilderd/tmp/tmpxc1j8hwc/g++_14.2.0-1_amd64.deb' dpkg-name: info: moved 'a8fad8c57c5cb5a4fa73af4c866d3347ba64fe83' to '/srv/rebuilderd/tmp/tmpngdxtqyn/gcc-14_14.2.0-19_amd64.deb' dpkg-name: info: moved '038b1cf2e09318b2206ddda615e2b31cbca25f61' to '/srv/rebuilderd/tmp/tmpab6hgqdw/libpam0g_1.7.0-3_amd64.deb' dpkg-name: info: moved '57bfcb47638bec5ea4490752a8a6e74978bd65e6' to '/srv/rebuilderd/tmp/tmp_jfjqyac/libhttp-date-perl_6.06-1_all.deb' dpkg-name: info: moved '0847b41fb4d86fbe68c32e4c1bbc5222c4faae23' to '/srv/rebuilderd/tmp/tmpj7cc2oar/xauth_1.1.2-1.1_amd64.deb' dpkg-name: info: moved 'af0e867223a0b3568ffa77c27fe172fd90ca1487' to '/srv/rebuilderd/tmp/tmpkwvdnj9x/libgomp1_14.2.0-19_amd64.deb' dpkg-name: info: moved '88eff3277c2e74be3878264096b958aab6ed33dd' to '/srv/rebuilderd/tmp/tmpbcuecmnk/libstdc++6_14.2.0-19_amd64.deb' dpkg-name: info: moved '890c75ffd3bd595233728f775acfa20693e53810' to '/srv/rebuilderd/tmp/tmpfs7aoizb/librtmp1_2.4+20151223.gitfa8646d.1-2+b5_amd64.deb' dpkg-name: info: moved 'e2c8ae102c47e6d7a509945b2cf34b18906bc555' to '/srv/rebuilderd/tmp/tmpl697pv60/libproc2-0_4.0.4-8_amd64.deb' dpkg-name: info: moved '63366c7a4935ec3db46d67fbe6d4c073b0c9fafb' to '/srv/rebuilderd/tmp/tmpviaaqv_l/libgmp10_6.3.0+dfsg-3_amd64.deb' dpkg-name: info: moved 'fd8035b2512c7ea141bb362d99cdb8edc83bb65b' to '/srv/rebuilderd/tmp/tmpuo7xyduw/cpp-14_14.2.0-19_amd64.deb' dpkg-name: info: moved 'fa115f879f903dd034373e0b8a034121bc896c7c' to '/srv/rebuilderd/tmp/tmp5bjq3_fe/libmodule-runtime-perl_0.018-1_all.deb' dpkg-name: info: moved '887f455ee8f1810536261fafd23df79d967f18ae' to '/srv/rebuilderd/tmp/tmpwm2i4wtd/libc6_2.41-7_amd64.deb' dpkg-name: info: moved '9f565e9b731dcf084216fa6ed867cc53c2a820ed' to '/srv/rebuilderd/tmp/tmplhsiw1ey/libhwasan0_14.2.0-19_amd64.deb' dpkg-name: info: moved '4e433c47f1dbb78a3ccf7004a74b9faef68cb949' to '/srv/rebuilderd/tmp/tmpdsei8xov/libtk8.6_8.6.16-1_amd64.deb' dpkg-name: info: moved '32cea9cdb0ed1f165b6ac40cc93af4135a0d42c2' to '/srv/rebuilderd/tmp/tmpg879fgiq/libparams-util-perl_1.102-3+b1_amd64.deb' dpkg-name: info: moved 'aec3197f6bcf7e2291d03ec699d088f590a33f83' to '/srv/rebuilderd/tmp/tmpofulap4b/liblsan0_14.2.0-19_amd64.deb' dpkg-name: info: moved 'e5e9327d88edff7e03a5d9f9ab0c46c1d8c06536' to '/srv/rebuilderd/tmp/tmpqypc33ra/libbrotli1_1.1.0-2+b7_amd64.deb' dpkg-name: info: moved '34d051d6a7c11fa262206e3086f827d87a63d0e9' to '/srv/rebuilderd/tmp/tmpbvlufv8k/libfile-stripnondeterminism-perl_1.14.1-2_all.deb' dpkg-name: info: moved 'c3e3ab098862b22a80f4bf418660ec448e0085dd' to '/srv/rebuilderd/tmp/tmpjctd40ls/libice6_1.1.1-1_amd64.deb' dpkg-name: info: moved '42fc22c76dade04c99d8a23141a5fe12d46ae697' to '/srv/rebuilderd/tmp/tmp3paodvlc/rpcsvc-proto_1.4.3-1_amd64.deb' dpkg-name: info: moved '61921be671ffab5ab351306b9cde74a0987cd62a' to '/srv/rebuilderd/tmp/tmpii4pdv06/findutils_4.10.0-3_amd64.deb' dpkg-name: info: moved '1df01dff6cf1fb531ae1f6845af2353adf463f98' to '/srv/rebuilderd/tmp/tmpvzwc9xmc/libswitch-perl_2.17-3_all.deb' dpkg-name: info: moved 'a55defce1d3092c37b9aeae9b98a45979efd27ea' to '/srv/rebuilderd/tmp/tmp_qhr5ynx/libpcre2-dev_10.45-1_amd64.deb' dpkg-name: info: moved '3c7a11b95bf17674f57763834134ebd4214f87ff' to '/srv/rebuilderd/tmp/tmps37o4bm7/libidn2-0_2.3.8-2_amd64.deb' dpkg-name: info: moved 'e1817234df69c35e66a256e911ba0a81eebdb111' to '/srv/rebuilderd/tmp/tmpid7jm74s/libaudit1_4.0.2-2+b2_amd64.deb' dpkg-name: info: moved '270987527962db11968d1d8bf2f50f5c4522b3af' to '/srv/rebuilderd/tmp/tmp_ivpgcoe/libmpc3_1.3.1-1+b3_amd64.deb' dpkg-name: info: moved '475722decc50725f650e326d52dfdd0c66853a6b' to '/srv/rebuilderd/tmp/tmpsypw4bq4/fonts-dejavu-core_2.37-8_all.deb' dpkg-name: info: moved '0b23e9913045875b317b4bdb7a4431c8782081bf' to '/srv/rebuilderd/tmp/tmpkd2aobtf/libldap2_2.6.9+dfsg-2_amd64.deb' dpkg-name: info: moved 'acab56dcc116f8299c197dff8e071559a4c0cbf9' to '/srv/rebuilderd/tmp/tmph4e0siut/grep_3.11-4_amd64.deb' dpkg-name: info: moved '2facbb10fd8a308c205c1217fe2928dad131ff64' to '/srv/rebuilderd/tmp/tmpjrjkuw7m/r-bioc-s4vectors_0.44.0+dfsg-2_amd64.deb' dpkg-name: info: moved '06f7234e9b67e89a6beefab94cc5440dfbbe5544' to '/srv/rebuilderd/tmp/tmpc5q5l1m4/libpackage-stash-perl_0.40-1_all.deb' dpkg-name: info: moved '1b039a35c6e9d3202f2226ecafd4ba19cce90b4e' to '/srv/rebuilderd/tmp/tmp7j2iku9c/libcc1-0_14.2.0-19_amd64.deb' dpkg-name: info: moved '14f727345a6c7b4b38782e321991b54844fe724f' to '/srv/rebuilderd/tmp/tmpe6uh8wem/bsdextrautils_2.41-4_amd64.deb' dpkg-name: info: moved 'b5e47d8c8c8a2532ea659d81df839aca048f6c13' to '/srv/rebuilderd/tmp/tmpa_mhly_j/pkgconf_1.8.1-4_amd64.deb' dpkg-name: info: moved '62a4f1119b1849b0cc9d676ad90e4a8ac5d3b721' to '/srv/rebuilderd/tmp/tmpimsdg92l/autotools-dev_20240727.1_all.deb' dpkg-name: info: moved '8656c80ef6d94cbe1d546c60bfa6018f0a374a29' to '/srv/rebuilderd/tmp/tmp4ici5t_m/perl-base_5.40.1-3_amd64.deb' dpkg-name: info: moved '624913997e172c9a330940051c719c832d9517ac' to '/srv/rebuilderd/tmp/tmpw3al83xp/dash_0.5.12-12_amd64.deb' dpkg-name: info: moved '7d5a9c212f57d84a3bd319a2407791b611707dce' to '/srv/rebuilderd/tmp/tmplpc_xn0l/debhelper_13.24.2_all.deb' dpkg-name: info: moved 'f4dc895f548553ad0f4d3990aece2014f3bffebf' to '/srv/rebuilderd/tmp/tmp_kw33m1o/r-cran-httr_1.4.7+dfsg-1_all.deb' dpkg-name: info: moved '41e32b67404120f64153d7155b44ec8d3dc39b48' to '/srv/rebuilderd/tmp/tmp5x573on1/liblzma-dev_5.8.1-1_amd64.deb' dpkg-name: info: moved '346f4c3e3d71e730ec6cfc39f6a5e84839b80ecc' to '/srv/rebuilderd/tmp/tmp6b97kg03/r-bioc-biocparallel_1.40.0-2_amd64.deb' dpkg-name: info: moved 'd0cb5516047722eea00700869d78cf0a6e36890e' to '/srv/rebuilderd/tmp/tmp03zzi_h1/libhttp-message-perl_7.00-2_all.deb' dpkg-name: info: moved '2b2689ceb04447f9e64d7660dd892cfaf98514f1' to '/srv/rebuilderd/tmp/tmpqml83frw/r-base-dev_4.5.0-2_all.deb' dpkg-name: info: moved '24a3a22da8a3c894ae31e2e72538d2d3d28e7790' to '/srv/rebuilderd/tmp/tmp3d0wqhrp/tar_1.35+dfsg-3.1_amd64.deb' dpkg-name: info: moved '42632289af95f004453b2deaf183de21282d7ca3' to '/srv/rebuilderd/tmp/tmpcox8o5tu/fontconfig-config_2.15.0-2.3_amd64.deb' dpkg-name: info: moved '5de899eb02651da6ae2a3fcbb4e9394c7ef802d4' to '/srv/rebuilderd/tmp/tmp7jv7ltyj/r-cran-curl_6.2.1+dfsg-1_amd64.deb' dpkg-buildpackage: info: source package debootsnap-dummy dpkg-buildpackage: info: source version 1.0 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Equivs Dummy Package Generator dpkg-buildpackage: info: host architecture amd64 dpkg-source --before-build . debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/debootsnap-dummy/ dh_install dh_installdocs dh_installchangelogs dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'debootsnap-dummy' in '../debootsnap-dummy_1.0_all.deb'. dpkg-genbuildinfo --build=binary -O../debootsnap-dummy_1.0_amd64.buildinfo dpkg-genchanges --build=binary -O../debootsnap-dummy_1.0_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) The package has been created. Attention, the package has been created in the /srv/rebuilderd/tmp/tmpmzxpoy_l/cache directory, not in ".." as indicated by the message above! I: automatically chosen mode: unshare I: chroot architecture amd64 is equal to the host's architecture I: using /srv/rebuilderd/tmp/mmdebstrap.EznyidMZfB as tempdir I: running --setup-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/setup00.sh /srv/rebuilderd/tmp/mmdebstrap.EznyidMZfB Ign:1 copy:/srv/rebuilderd/tmp/tmpmzxpoy_l/cache ./ InRelease Get:2 copy:/srv/rebuilderd/tmp/tmpmzxpoy_l/cache ./ Release [462 B] Ign:3 copy:/srv/rebuilderd/tmp/tmpmzxpoy_l/cache ./ Release.gpg Get:4 copy:/srv/rebuilderd/tmp/tmpmzxpoy_l/cache ./ Packages [457 kB] Fetched 458 kB in 0s (12.1 MB/s) Reading package lists... usr-is-merged found but not real -- not running merged-usr setup hook I: skipping apt-get update because it was already run I: downloading packages with apt... I: extracting archives... I: running --extract-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/extract00.sh /srv/rebuilderd/tmp/mmdebstrap.EznyidMZfB Ign:1 copy:/srv/rebuilderd/tmp/tmpmzxpoy_l/cache ./ InRelease Get:2 copy:/srv/rebuilderd/tmp/tmpmzxpoy_l/cache ./ Release [462 B] Ign:3 copy:/srv/rebuilderd/tmp/tmpmzxpoy_l/cache ./ Release.gpg Fetched 462 B in 0s (44.5 kB/s) Reading package lists... usr-is-merged found but not real -- not running merged-usr extract hook I: installing essential packages... I: running --essential-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/essential00.sh /srv/rebuilderd/tmp/mmdebstrap.EznyidMZfB usr-is-merged was not installed in a previous hook -- not running merged-usr essential hook I: installing remaining packages inside the chroot... I: running --customize-hook directly: /srv/rebuilderd/tmp/tmpmzxpoy_l/apt_install.sh /srv/rebuilderd/tmp/mmdebstrap.EznyidMZfB Reading package lists... Building dependency tree... Reading state information... libdb5.3t64 is already the newest version (5.3.28+dfsg2-9). cpp-x86-64-linux-gnu is already the newest version (4:14.2.0-1). cpp-x86-64-linux-gnu set to manually installed. libselinux1 is already the newest version (3.8.1-1). libncurses-dev is already the newest version (6.5+20250216-2). libncurses-dev set to manually installed. libkrb5-3 is already the newest version (1.21.3-5). libkrb5-3 set to manually installed. libpkgconf3 is already the newest version (1.8.1-4). libpkgconf3 set to manually installed. xdg-utils is already the newest version (1.2.1-2). xdg-utils set to manually installed. libreadline8t64 is already the newest version (8.2-6). libreadline8t64 set to manually installed. libboost1.83-dev is already the newest version (1.83.0-4.2). libboost1.83-dev set to manually installed. dh-strip-nondeterminism is already the newest version (1.14.1-2). dh-strip-nondeterminism set to manually installed. libpackage-deprecationmanager-perl is already the newest version (0.18-1). libpackage-deprecationmanager-perl set to manually installed. r-cran-cpp11 is already the newest version (0.5.2-1). r-cran-cpp11 set to manually installed. libmpfr6 is already the newest version (4.2.2-1). libmpfr6 set to manually installed. cpp is already the newest version (4:14.2.0-1). cpp set to manually installed. ncurses-bin is already the newest version (6.5+20250216-2). libblas3 is already the newest version (3.12.1-2). libblas3 set to manually installed. m4 is already the newest version (1.4.19-8). m4 set to manually installed. libffi8 is already the newest version (3.4.8-2). libffi8 set to manually installed. r-cran-mime is already the newest version (0.12-2). r-cran-mime set to manually installed. r-cran-jsonlite is already the newest version (1.9.1+dfsg-1). r-cran-jsonlite set to manually installed. r-cran-matrix is already the newest version (1.7-3-1). r-cran-matrix set to manually installed. libpcre2-posix3 is already the newest version (10.45-1). libpcre2-posix3 set to manually installed. r-cran-snow is already the newest version (1:0.4.4-2). r-cran-snow set to manually installed. dwz is already the newest version (0.15-1+b1). dwz set to manually installed. libnamespace-clean-perl is already the newest version (0.27-2). libnamespace-clean-perl set to manually installed. r-cran-restfulr is already the newest version (0.0.15-1). r-cran-restfulr set to manually installed. libsub-identify-perl is already the newest version (0.14-3+b3). libsub-identify-perl set to manually installed. libnghttp3-9 is already the newest version (1.8.0-1). libnghttp3-9 set to manually installed. libuuid1 is already the newest version (2.41-4). libxt6t64 is already the newest version (1:1.2.1-1.2+b2). libxt6t64 set to manually installed. libmount1 is already the newest version (2.41-4). libxft2 is already the newest version (2.3.6-1+b4). libxft2 set to manually installed. libreadline-dev is already the newest version (8.2-6). libreadline-dev set to manually installed. r-bioc-biostrings is already the newest version (2.74.1+dfsg-2). r-bioc-biostrings set to manually installed. zip is already the newest version (3.0-15). zip set to manually installed. libtasn1-6 is already the newest version (4.20.0-2). libtasn1-6 set to manually installed. libdevel-overloadinfo-perl is already the newest version (0.007-1). libdevel-overloadinfo-perl set to manually installed. libcom-err2 is already the newest version (1.47.2-1+b1). libcom-err2 set to manually installed. libsystemd0 is already the newest version (257.5-2). libpam-modules-bin is already the newest version (1.7.0-3). libclass-load-xs-perl is already the newest version (0.10-2+b4). libclass-load-xs-perl set to manually installed. libsub-exporter-perl is already the newest version (0.990-1). libsub-exporter-perl set to manually installed. r-cran-rcurl is already the newest version (1.98-1.16+dfsg-1). r-cran-rcurl set to manually installed. libncursesw6 is already the newest version (6.5+20250216-2). libncursesw6 set to manually installed. libencode-locale-perl is already the newest version (1.05-3). libencode-locale-perl set to manually installed. libpng16-16t64 is already the newest version (1.6.47-1.1). libpng16-16t64 set to manually installed. bash is already the newest version (5.2.37-2). libclass-c3-perl is already the newest version (0.35-2). libclass-c3-perl set to manually installed. libeval-closure-perl is already the newest version (0.14-3). libeval-closure-perl set to manually installed. r-cran-yaml is already the newest version (2.3.10-1). r-cran-yaml set to manually installed. liblapack-dev is already the newest version (3.12.1-2). liblapack-dev set to manually installed. r-bioc-summarizedexperiment is already the newest version (1.36.0+dfsg-2). r-bioc-summarizedexperiment set to manually installed. libdevel-globaldestruction-perl is already the newest version (0.14-4). libdevel-globaldestruction-perl set to manually installed. ucf is already the newest version (3.0051). ucf set to manually installed. libpackage-stash-xs-perl is already the newest version (0.30-1+b4). libpackage-stash-xs-perl set to manually installed. gcc-x86-64-linux-gnu is already the newest version (4:14.2.0-1). gcc-x86-64-linux-gnu set to manually installed. libelf1t64 is already the newest version (0.192-4). libelf1t64 set to manually installed. libicu-dev is already the newest version (76.1-3). libicu-dev set to manually installed. libpsl5t64 is already the newest version (0.21.2-1.1+b1). libpsl5t64 set to manually installed. libdynaloader-functions-perl is already the newest version (0.004-2). libdynaloader-functions-perl set to manually installed. libharfbuzz0b is already the newest version (10.2.0-1+b1). libharfbuzz0b set to manually installed. libmoose-perl is already the newest version (2.2207-1+b3). libmoose-perl set to manually installed. libhogweed6t64 is already the newest version (3.10.1-1). libhogweed6t64 set to manually installed. zlib1g is already the newest version (1:1.3.dfsg+really1.3.1-1+b1). r-bioc-ucsc.utils is already the newest version (1.2.0+ds-2). r-bioc-ucsc.utils set to manually installed. gzip is already the newest version (1.13-1). libmodule-implementation-perl is already the newest version (0.09-2). libmodule-implementation-perl set to manually installed. libpcre2-32-0 is already the newest version (10.45-1). libpcre2-32-0 set to manually installed. libtimedate-perl is already the newest version (2.3300-2). libtimedate-perl set to manually installed. libnettle8t64 is already the newest version (3.10.1-1). libnettle8t64 set to manually installed. libdevel-callchecker-perl is already the newest version (0.009-2). libdevel-callchecker-perl set to manually installed. libunistring5 is already the newest version (1.3-2). libunistring5 set to manually installed. intltool-debian is already the newest version (0.35.0+20060710.6). intltool-debian set to manually installed. diffutils is already the newest version (1:3.10-4). libpaper2 is already the newest version (2.2.5-0.3+b2). libpaper2 set to manually installed. openssl-provider-legacy is already the newest version (3.5.0-1). perl-modules-5.40 is already the newest version (5.40.1-3). perl-modules-5.40 set to manually installed. r-bioc-xvector is already the newest version (0.46.0-2). r-bioc-xvector set to manually installed. r-cran-rjson is already the newest version (0.2.23-1). r-cran-rjson set to manually installed. sysvinit-utils is already the newest version (3.14-4). sed is already the newest version (4.9-2). libsmartcols1 is already the newest version (2.41-4). r-bioc-biocgenerics is already the newest version (0.52.0-2). r-bioc-biocgenerics set to manually installed. r-cran-r6 is already the newest version (2.6.1-1). r-cran-r6 set to manually installed. r-bioc-delayedarray is already the newest version (0.32.0+dfsg-2). r-bioc-delayedarray set to manually installed. libgraphite2-3 is already the newest version (1.3.14-2+b1). libgraphite2-3 set to manually installed. libsub-name-perl is already the newest version (0.28-1). libsub-name-perl set to manually installed. r-cran-matrixstats is already the newest version (1.5.0-1). r-cran-matrixstats set to manually installed. libasan8 is already the newest version (14.2.0-19). libasan8 set to manually installed. libclone-perl is already the newest version (0.47-1+b1). libclone-perl set to manually installed. x11-common is already the newest version (1:7.7+24). x11-common set to manually installed. base-files is already the newest version (13.7). automake is already the newest version (1:1.17-4). automake set to manually installed. r-bioc-genomeinfodb is already the newest version (1.42.3+dfsg-1). r-bioc-genomeinfodb set to manually installed. libmagic1t64 is already the newest version (1:5.46-5). libmagic1t64 set to manually installed. libpng-dev is already the newest version (1.6.47-1.1). libpng-dev set to manually installed. binutils-common is already the newest version (2.44-3). binutils-common set to manually installed. r-cran-openssl is already the newest version (2.3.2+dfsg-1). r-cran-openssl set to manually installed. libcurl3t64-gnutls is already the newest version (8.13.0-5). libcurl3t64-gnutls set to manually installed. libgfortran5 is already the newest version (14.2.0-19). libgfortran5 set to manually installed. r-bioc-genomicranges is already the newest version (1.58.0+dfsg-2). r-bioc-genomicranges set to manually installed. dctrl-tools is already the newest version (2.24-3+b1). dctrl-tools set to manually installed. libmodule-runtime-conflicts-perl is already the newest version (0.003-2). libmodule-runtime-conflicts-perl set to manually installed. libparams-classify-perl is already the newest version (0.015-2+b4). libparams-classify-perl set to manually installed. libgfortran-14-dev is already the newest version (14.2.0-19). libgfortran-14-dev set to manually installed. r-cran-codetools is already the newest version (0.2-20-1). r-cran-codetools set to manually installed. r-bioc-genomeinfodbdata is already the newest version (1.2.13-2). r-bioc-genomeinfodbdata set to manually installed. fonts-dejavu-mono is already the newest version (2.37-8). fonts-dejavu-mono set to manually installed. libclass-load-perl is already the newest version (0.25-2). libclass-load-perl set to manually installed. libpangocairo-1.0-0 is already the newest version (1.56.3-1). libpangocairo-1.0-0 set to manually installed. libalgorithm-c3-perl is already the newest version (0.11-2). libalgorithm-c3-perl set to manually installed. libsm6 is already the newest version (2:1.2.6-1). libsm6 set to manually installed. libsframe1 is already the newest version (2.44-3). libsframe1 set to manually installed. libpam-runtime is already the newest version (1.7.0-3). libcurl4t64 is already the newest version (8.13.0-5). libcurl4t64 set to manually installed. libsharpyuv0 is already the newest version (1.5.0-0.1). libsharpyuv0 set to manually installed. libwww-curl-simple-perl is already the newest version (0.100191-3). libwww-curl-simple-perl set to manually installed. hostname is already the newest version (3.25). libtext-wrapi18n-perl is already the newest version (0.06-10). libtext-wrapi18n-perl set to manually installed. libpcre2-16-0 is already the newest version (10.45-1). libpcre2-16-0 set to manually installed. zlib1g-dev is already the newest version (1:1.3.dfsg+really1.3.1-1+b1). zlib1g-dev set to manually installed. autoconf is already the newest version (2.72-3.1). autoconf set to manually installed. libblas-dev is already the newest version (3.12.1-2). libblas-dev set to manually installed. r-cran-futile.logger is already the newest version (1.4.3-4). r-cran-futile.logger set to manually installed. libpixman-1-0 is already the newest version (0.44.0-3). libpixman-1-0 set to manually installed. libwebp7 is already the newest version (1.5.0-0.1). libwebp7 set to manually installed. r-bioc-s4arrays is already the newest version (1.6.0+dfsg-2). r-bioc-s4arrays set to manually installed. fontconfig is already the newest version (2.15.0-2.3). fontconfig set to manually installed. libgdbm6t64 is already the newest version (1.24-2). libgdbm6t64 set to manually installed. libxml2 is already the newest version (2.12.7+dfsg+really2.9.14-0.4). libxml2 set to manually installed. libjpeg62-turbo is already the newest version (1:2.1.5-3.1). libjpeg62-turbo set to manually installed. debconf is already the newest version (1.5.91). ncurses-base is already the newest version (6.5+20250216-2). libarchive-zip-perl is already the newest version (1.68-1). libarchive-zip-perl set to manually installed. libdeflate-dev is already the newest version (1.23-2). libdeflate-dev set to manually installed. gcc-14-base is already the newest version (14.2.0-19). binutils is already the newest version (2.44-3). binutils set to manually installed. libtinfo6 is already the newest version (6.5+20250216-2). libuchardet0 is already the newest version (0.0.8-1+b2). libuchardet0 set to manually installed. libcap-ng0 is already the newest version (0.8.5-4+b1). libncurses6 is already the newest version (6.5+20250216-2). libncurses6 set to manually installed. libtsan2 is already the newest version (14.2.0-19). libtsan2 set to manually installed. libdata-optlist-perl is already the newest version (0.114-1). libdata-optlist-perl set to manually installed. r-base-core is already the newest version (4.5.0-2). r-base-core set to manually installed. libxdmcp6 is already the newest version (1:1.1.5-1). libxdmcp6 set to manually installed. libtirpc-dev is already the newest version (1.3.6+ds-1). libtirpc-dev set to manually installed. libpam-modules is already the newest version (1.7.0-3). liblapack3 is already the newest version (3.12.1-2). liblapack3 set to manually installed. libtiff6 is already the newest version (4.7.0-3). libtiff6 set to manually installed. libzstd1 is already the newest version (1.5.7+dfsg-1). mawk is already the newest version (1.3.4.20250131-1). libblkid1 is already the newest version (2.41-4). r-bioc-biocio is already the newest version (1.16.0+dfsg-2). r-bioc-biocio set to manually installed. gfortran is already the newest version (4:14.2.0-1). gfortran set to manually installed. libxrender1 is already the newest version (1:0.9.12-1). libxrender1 set to manually installed. libp11-kit0 is already the newest version (0.25.5-3). libp11-kit0 set to manually installed. r-cran-bh is already the newest version (1.84.0-1). r-cran-bh set to manually installed. libdevel-stacktrace-perl is already the newest version (2.0500-1). libdevel-stacktrace-perl set to manually installed. libjansson4 is already the newest version (2.14-2+b3). libjansson4 set to manually installed. dpkg-dev is already the newest version (1.22.18). dpkg-dev set to manually installed. r-bioc-rhtslib is already the newest version (3.2.0+dfsg-2). r-bioc-rhtslib set to manually installed. build-essential is already the newest version (12.12). build-essential set to manually installed. libio-html-perl is already the newest version (1.004-3). libio-html-perl set to manually installed. libngtcp2-crypto-gnutls8 is already the newest version (1.11.0-1). libngtcp2-crypto-gnutls8 set to manually installed. r-cran-lattice is already the newest version (0.22-7-1). r-cran-lattice set to manually installed. base-passwd is already the newest version (3.6.7). libxau6 is already the newest version (1:1.0.11-1). libxau6 set to manually installed. gcc-14-x86-64-linux-gnu is already the newest version (14.2.0-19). gcc-14-x86-64-linux-gnu set to manually installed. libsub-install-perl is already the newest version (0.929-1). libsub-install-perl set to manually installed. g++-14 is already the newest version (14.2.0-19). g++-14 set to manually installed. unzip is already the newest version (6.0-29). unzip set to manually installed. libbinutils is already the newest version (2.44-3). libbinutils set to manually installed. libaudit-common is already the newest version (1:4.0.2-2). autopoint is already the newest version (0.23.1-2). autopoint set to manually installed. liblzma5 is already the newest version (5.8.1-1). libb-hooks-endofscope-perl is already the newest version (0.28-1). libb-hooks-endofscope-perl set to manually installed. r-cran-askpass is already the newest version (1.2.1-1). r-cran-askpass set to manually installed. libtext-charwidth-perl is already the newest version (0.04-11+b4). libtext-charwidth-perl set to manually installed. libbz2-dev is already the newest version (1.0.8-6). libbz2-dev set to manually installed. r-bioc-iranges is already the newest version (2.40.1-3). r-bioc-iranges set to manually installed. libxcb1 is already the newest version (1.17.0-2+b1). libxcb1 set to manually installed. libtirpc3t64 is already the newest version (1.3.6+ds-1). libtirpc3t64 set to manually installed. r-cran-formatr is already the newest version (1.14-2). r-cran-formatr set to manually installed. po-debconf is already the newest version (1.0.21+nmu1). po-debconf set to manually installed. man-db is already the newest version (2.13.0-1). man-db set to manually installed. liblerc4 is already the newest version (4.0.0+ds-5). liblerc4 set to manually installed. util-linux is already the newest version (2.41-4). libkeyutils1 is already the newest version (1.6.3-6). libkeyutils1 set to manually installed. libcrypt1 is already the newest version (1:4.4.38-1). libdpkg-perl is already the newest version (1.22.18). libdpkg-perl set to manually installed. libvariable-magic-perl is already the newest version (0.64-1+b1). libvariable-magic-perl set to manually installed. libxmuu1 is already the newest version (2:1.1.3-3+b4). libxmuu1 set to manually installed. libpipeline1 is already the newest version (1.5.8-1). libpipeline1 set to manually installed. libicu76 is already the newest version (76.1-3). libicu76 set to manually installed. libubsan1 is already the newest version (14.2.0-19). libubsan1 set to manually installed. libxcb-shm0 is already the newest version (1.17.0-2+b1). libxcb-shm0 set to manually installed. libctf-nobfd0 is already the newest version (2.44-3). libctf-nobfd0 set to manually installed. bzip2 is already the newest version (1.0.8-6). bzip2 set to manually installed. libgnutls30t64 is already the newest version (3.8.9-2). libgnutls30t64 set to manually installed. libattr1 is already the newest version (1:2.5.2-3). r-cran-mass is already the newest version (7.3-65-1). r-cran-mass set to manually installed. r-bioc-biobase is already the newest version (2.66.0-2). r-bioc-biobase set to manually installed. libfribidi0 is already the newest version (1.0.16-1). libfribidi0 set to manually installed. libfile-which-perl is already the newest version (1.27-2). libfile-which-perl set to manually installed. gettext is already the newest version (0.23.1-2). gettext set to manually installed. tzdata is already the newest version (2025b-2). tzdata set to manually installed. libc6-dev is already the newest version (2.41-7). libc6-dev set to manually installed. libjpeg-dev is already the newest version (1:2.1.5-3.1). libjpeg-dev set to manually installed. libb-hooks-op-check-perl is already the newest version (0.22-3+b2). libb-hooks-op-check-perl set to manually installed. libdebconfclient0 is already the newest version (0.278). libcrypt-dev is already the newest version (1:4.4.38-1). libcrypt-dev set to manually installed. libstdc++-14-dev is already the newest version (14.2.0-19). libstdc++-14-dev set to manually installed. libnghttp2-14 is already the newest version (1.64.0-1.1). libnghttp2-14 set to manually installed. libperl5.40 is already the newest version (5.40.1-3). libperl5.40 set to manually installed. r-cran-lambda.r is already the newest version (1.2.4-2). r-cran-lambda.r set to manually installed. r-bioc-rtracklayer is already the newest version (1.66.0-3). r-bioc-rtracklayer set to manually installed. libgssapi-krb5-2 is already the newest version (1.21.3-5). libgssapi-krb5-2 set to manually installed. libssh2-1t64 is already the newest version (1.11.1-1). libssh2-1t64 set to manually installed. g++-14-x86-64-linux-gnu is already the newest version (14.2.0-19). g++-14-x86-64-linux-gnu set to manually installed. groff-base is already the newest version (1.23.0-7). groff-base set to manually installed. libgprofng0 is already the newest version (2.44-3). libgprofng0 set to manually installed. libdist-checkconflicts-perl is already the newest version (0.11-2). libdist-checkconflicts-perl set to manually installed. libzstd-dev is already the newest version (1.5.7+dfsg-1). libzstd-dev set to manually installed. libtirpc-common is already the newest version (1.3.6+ds-1). libtirpc-common set to manually installed. libfontconfig1 is already the newest version (2.15.0-2.3). libfontconfig1 set to manually installed. libtry-tiny-perl is already the newest version (0.32-1). libtry-tiny-perl set to manually installed. binutils-x86-64-linux-gnu is already the newest version (2.44-3). binutils-x86-64-linux-gnu set to manually installed. libfreetype6 is already the newest version (2.13.3+dfsg-1). libfreetype6 set to manually installed. liblastlog2-2 is already the newest version (2.41-4). pkgconf-bin is already the newest version (1.8.1-4). pkgconf-bin set to manually installed. libdatrie1 is already the newest version (0.2.13-3+b1). libdatrie1 set to manually installed. liblwp-mediatypes-perl is already the newest version (6.04-2). liblwp-mediatypes-perl set to manually installed. r-cran-crayon is already the newest version (1.5.3-1). r-cran-crayon set to manually installed. r-cran-xml is already the newest version (3.99-0.18-1). r-cran-xml set to manually installed. libgcc-14-dev is already the newest version (14.2.0-19). libgcc-14-dev set to manually installed. libexpat1 is already the newest version (2.7.1-1). libexpat1 set to manually installed. libthai0 is already the newest version (0.1.29-2+b1). libthai0 set to manually installed. gettext-base is already the newest version (0.23.1-2). gettext-base set to manually installed. gfortran-x86-64-linux-gnu is already the newest version (4:14.2.0-1). gfortran-x86-64-linux-gnu set to manually installed. libpcre2-8-0 is already the newest version (10.45-1). libpaper-utils is already the newest version (2.2.5-0.3+b2). libpaper-utils set to manually installed. libwww-curl-perl is already the newest version (4.17-12). libwww-curl-perl set to manually installed. gfortran-14 is already the newest version (14.2.0-19). gfortran-14 set to manually installed. file is already the newest version (1:5.46-5). file set to manually installed. libc-dev-bin is already the newest version (2.41-7). libc-dev-bin set to manually installed. init-system-helpers is already the newest version (1.68). libgcc-s1 is already the newest version (14.2.0-19). libdebhelper-perl is already the newest version (13.24.2). libdebhelper-perl set to manually installed. ca-certificates is already the newest version (20250419). ca-certificates set to manually installed. libsqlite3-0 is already the newest version (3.46.1-3). linux-libc-dev is already the newest version (6.12.25-1). linux-libc-dev set to manually installed. r-cran-sys is already the newest version (3.4.3-1). r-cran-sys set to manually installed. libpango-1.0-0 is already the newest version (1.56.3-1). libpango-1.0-0 set to manually installed. r-cran-abind is already the newest version (1.4-8-1). r-cran-abind set to manually installed. libx11-6 is already the newest version (2:1.8.12-1). libx11-6 set to manually installed. libboost-dev is already the newest version (1.83.0.2+b2). libboost-dev set to manually installed. libatomic1 is already the newest version (14.2.0-19). libatomic1 set to manually installed. readline-common is already the newest version (8.2-6). readline-common set to manually installed. bsdutils is already the newest version (1:2.41-4). dh-autoreconf is already the newest version (20). dh-autoreconf set to manually installed. libisl23 is already the newest version (0.27-1). libisl23 set to manually installed. gcc is already the newest version (4:14.2.0-1). gcc set to manually installed. icu-devtools is already the newest version (76.1-3). icu-devtools set to manually installed. libk5crypto3 is already the newest version (1.21.3-5). libk5crypto3 set to manually installed. libacl1 is already the newest version (2.3.2-2+b1). r-cran-bitops is already the newest version (1.0-9-1). r-cran-bitops set to manually installed. r-cran-futile.options is already the newest version (1.0.1-3). r-cran-futile.options set to manually installed. patch is already the newest version (2.8-1). patch set to manually installed. libmro-compat-perl is already the newest version (0.15-2). libmro-compat-perl set to manually installed. procps is already the newest version (2:4.0.4-8). procps set to manually installed. libmd0 is already the newest version (1.1.0-2+b1). debianutils is already the newest version (5.22). dpkg is already the newest version (1.22.18). libctf0 is already the newest version (2.44-3). libctf0 set to manually installed. r-bioc-zlibbioc is already the newest version (1.52.0+dfsg-2). r-bioc-zlibbioc set to manually installed. libitm1 is already the newest version (14.2.0-19). libitm1 set to manually installed. libudev1 is already the newest version (257.5-2). libthai-data is already the newest version (0.1.29-2). libthai-data set to manually installed. dh-r is already the newest version (20241218). dh-r set to manually installed. libtool is already the newest version (2.5.4-4). libtool set to manually installed. libcap2 is already the newest version (1:2.75-7). coreutils is already the newest version (9.7-2). libssl3t64 is already the newest version (3.5.0-1). libxext6 is already the newest version (2:1.3.4-1+b3). libxext6 set to manually installed. r-bioc-rsamtools is already the newest version (2.22.0+dfsg-2). r-bioc-rsamtools set to manually installed. cpp-14-x86-64-linux-gnu is already the newest version (14.2.0-19). cpp-14-x86-64-linux-gnu set to manually installed. libquadmath0 is already the newest version (14.2.0-19). libquadmath0 set to manually installed. gfortran-14-x86-64-linux-gnu is already the newest version (14.2.0-19). gfortran-14-x86-64-linux-gnu set to manually installed. libgdbm-compat4t64 is already the newest version (1.24-2). libgdbm-compat4t64 set to manually installed. libngtcp2-16 is already the newest version (1.11.0-1). libngtcp2-16 set to manually installed. r-bioc-sparsearray is already the newest version (1.6.2+dfsg-2). r-bioc-sparsearray set to manually installed. libseccomp2 is already the newest version (2.6.0-2). libseccomp2 set to manually installed. r-bioc-matrixgenerics is already the newest version (1.18.1-1). r-bioc-matrixgenerics set to manually installed. perl is already the newest version (5.40.1-3). perl set to manually installed. libglib2.0-0t64 is already the newest version (2.84.1-2). libglib2.0-0t64 set to manually installed. make is already the newest version (4.4.1-2). make set to manually installed. sensible-utils is already the newest version (0.0.25). sensible-utils set to manually installed. xz-utils is already the newest version (5.8.1-1). xz-utils set to manually installed. libsasl2-2 is already the newest version (2.1.28+dfsg1-9). libsasl2-2 set to manually installed. architecture-properties is already the newest version (0.2.6). architecture-properties set to manually installed. libdeflate0 is already the newest version (1.23-2). libdeflate0 set to manually installed. openssl is already the newest version (3.5.0-1). openssl set to manually installed. libsasl2-modules-db is already the newest version (2.1.28+dfsg1-9). libsasl2-modules-db set to manually installed. g++-x86-64-linux-gnu is already the newest version (4:14.2.0-1). g++-x86-64-linux-gnu set to manually installed. libjpeg62-turbo-dev is already the newest version (1:2.1.5-3.1). libjpeg62-turbo-dev set to manually installed. libpangoft2-1.0-0 is already the newest version (1.56.3-1). libpangoft2-1.0-0 set to manually installed. libbz2-1.0 is already the newest version (1.0.8-6). libkrb5support0 is already the newest version (1.21.3-5). libkrb5support0 set to manually installed. r-bioc-genomicalignments is already the newest version (1.42.0-2). r-bioc-genomicalignments set to manually installed. libxss1 is already the newest version (1:1.2.3-1+b3). libxss1 set to manually installed. libmagic-mgc is already the newest version (1:5.46-5). libmagic-mgc set to manually installed. libcairo2 is already the newest version (1.18.4-1+b1). libcairo2 set to manually installed. libjbig0 is already the newest version (2.1-6.1+b2). libjbig0 set to manually installed. liburi-perl is already the newest version (5.30-1). liburi-perl set to manually installed. libtcl8.6 is already the newest version (8.6.16+dfsg-1). libtcl8.6 set to manually installed. libsub-exporter-progressive-perl is already the newest version (0.001013-3). libsub-exporter-progressive-perl set to manually installed. libxcb-render0 is already the newest version (1.17.0-2+b1). libxcb-render0 set to manually installed. libc-bin is already the newest version (2.41-7). libx11-data is already the newest version (2:1.8.12-1). libx11-data set to manually installed. g++ is already the newest version (4:14.2.0-1). g++ set to manually installed. gcc-14 is already the newest version (14.2.0-19). gcc-14 set to manually installed. libpam0g is already the newest version (1.7.0-3). libhttp-date-perl is already the newest version (6.06-1). libhttp-date-perl set to manually installed. xauth is already the newest version (1:1.1.2-1.1). xauth set to manually installed. libgomp1 is already the newest version (14.2.0-19). libgomp1 set to manually installed. libstdc++6 is already the newest version (14.2.0-19). libstdc++6 set to manually installed. librtmp1 is already the newest version (2.4+20151223.gitfa8646d.1-2+b5). librtmp1 set to manually installed. libproc2-0 is already the newest version (2:4.0.4-8). libproc2-0 set to manually installed. libgmp10 is already the newest version (2:6.3.0+dfsg-3). cpp-14 is already the newest version (14.2.0-19). cpp-14 set to manually installed. libmodule-runtime-perl is already the newest version (0.018-1). libmodule-runtime-perl set to manually installed. libc6 is already the newest version (2.41-7). libhwasan0 is already the newest version (14.2.0-19). libhwasan0 set to manually installed. libtk8.6 is already the newest version (8.6.16-1). libtk8.6 set to manually installed. libparams-util-perl is already the newest version (1.102-3+b1). libparams-util-perl set to manually installed. liblsan0 is already the newest version (14.2.0-19). liblsan0 set to manually installed. libbrotli1 is already the newest version (1.1.0-2+b7). libbrotli1 set to manually installed. libfile-stripnondeterminism-perl is already the newest version (1.14.1-2). libfile-stripnondeterminism-perl set to manually installed. libice6 is already the newest version (2:1.1.1-1). libice6 set to manually installed. rpcsvc-proto is already the newest version (1.4.3-1). rpcsvc-proto set to manually installed. findutils is already the newest version (4.10.0-3). libswitch-perl is already the newest version (2.17-3). libswitch-perl set to manually installed. libpcre2-dev is already the newest version (10.45-1). libpcre2-dev set to manually installed. libidn2-0 is already the newest version (2.3.8-2). libidn2-0 set to manually installed. libaudit1 is already the newest version (1:4.0.2-2+b2). libmpc3 is already the newest version (1.3.1-1+b3). libmpc3 set to manually installed. fonts-dejavu-core is already the newest version (2.37-8). fonts-dejavu-core set to manually installed. libldap2 is already the newest version (2.6.9+dfsg-2). libldap2 set to manually installed. grep is already the newest version (3.11-4). r-bioc-s4vectors is already the newest version (0.44.0+dfsg-2). r-bioc-s4vectors set to manually installed. libpackage-stash-perl is already the newest version (0.40-1). libpackage-stash-perl set to manually installed. libcc1-0 is already the newest version (14.2.0-19). libcc1-0 set to manually installed. bsdextrautils is already the newest version (2.41-4). bsdextrautils set to manually installed. pkgconf is already the newest version (1.8.1-4). pkgconf set to manually installed. autotools-dev is already the newest version (20240727.1). autotools-dev set to manually installed. perl-base is already the newest version (5.40.1-3). dash is already the newest version (0.5.12-12). debhelper is already the newest version (13.24.2). debhelper set to manually installed. r-cran-httr is already the newest version (1.4.7+dfsg-1). r-cran-httr set to manually installed. liblzma-dev is already the newest version (5.8.1-1). liblzma-dev set to manually installed. r-bioc-biocparallel is already the newest version (1.40.0-2). r-bioc-biocparallel set to manually installed. libhttp-message-perl is already the newest version (7.00-2). libhttp-message-perl set to manually installed. r-base-dev is already the newest version (4.5.0-2). r-base-dev set to manually installed. tar is already the newest version (1.35+dfsg-3.1). fontconfig-config is already the newest version (2.15.0-2.3). fontconfig-config set to manually installed. r-cran-curl is already the newest version (6.2.1+dfsg-1). r-cran-curl set to manually installed. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: running --customize-hook in shell: sh -c 'chroot "$1" dpkg -r debootsnap-dummy' exec /srv/rebuilderd/tmp/mmdebstrap.EznyidMZfB (Reading database ... 40365 files and directories currently installed.) Removing debootsnap-dummy (1.0) ... I: running --customize-hook in shell: sh -c 'chroot "$1" dpkg-query --showformat '${binary:Package}=${Version}\n' --show > "$1/pkglist"' exec /srv/rebuilderd/tmp/mmdebstrap.EznyidMZfB I: running special hook: download /pkglist ./pkglist I: running --customize-hook in shell: sh -c 'rm "$1/pkglist"' exec /srv/rebuilderd/tmp/mmdebstrap.EznyidMZfB I: waiting for background processes to finish... I: cleaning package lists and apt cache... I: skipping cleanup/reproducible as requested I: creating tarball... I: done I: removing tempdir /srv/rebuilderd/tmp/mmdebstrap.EznyidMZfB... I: success in 60.0675 seconds Downloading dependency 256 of 366: libboost-dev:amd64=1.83.0.2+b2 Downloading dependency 257 of 366: libatomic1:amd64=14.2.0-19 Downloading dependency 258 of 366: readline-common:amd64=8.2-6 Downloading dependency 259 of 366: bsdutils:amd64=1:2.41-4 Downloading dependency 260 of 366: dh-autoreconf:amd64=20 Downloading dependency 261 of 366: libisl23:amd64=0.27-1 Downloading dependency 262 of 366: gcc:amd64=4:14.2.0-1 Downloading dependency 263 of 366: icu-devtools:amd64=76.1-3 Downloading dependency 264 of 366: libk5crypto3:amd64=1.21.3-5 Downloading dependency 265 of 366: libacl1:amd64=2.3.2-2+b1 Downloading dependency 266 of 366: r-cran-bitops:amd64=1.0-9-1 Downloading dependency 267 of 366: r-cran-futile.options:amd64=1.0.1-3 Downloading dependency 268 of 366: patch:amd64=2.8-1 Downloading dependency 269 of 366: libmro-compat-perl:amd64=0.15-2 Downloading dependency 270 of 366: procps:amd64=2:4.0.4-8 Downloading dependency 271 of 366: 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dependency 349 of 366: grep:amd64=3.11-4 Downloading dependency 350 of 366: r-bioc-s4vectors:amd64=0.44.0+dfsg-2 Downloading dependency 351 of 366: libpackage-stash-perl:amd64=0.40-1 Downloading dependency 352 of 366: libcc1-0:amd64=14.2.0-19 Downloading dependency 353 of 366: bsdextrautils:amd64=2.41-4 Downloading dependency 354 of 366: pkgconf:amd64=1.8.1-4 Downloading dependency 355 of 366: autotools-dev:amd64=20240727.1 Downloading dependency 356 of 366: perl-base:amd64=5.40.1-3 Downloading dependency 357 of 366: dash:amd64=0.5.12-12 Downloading dependency 358 of 366: debhelper:amd64=13.24.2 Downloading dependency 359 of 366: r-cran-httr:amd64=1.4.7+dfsg-1 Downloading dependency 360 of 366: liblzma-dev:amd64=5.8.1-1 Downloading dependency 361 of 366: r-bioc-biocparallel:amd64=1.40.0-2 Downloading dependency 362 of 366: libhttp-message-perl:amd64=7.00-2 Downloading dependency 363 of 366: r-base-dev:amd64=4.5.0-2 Downloading dependency 364 of 366: tar:amd64=1.35+dfsg-3.1 Downloading dependency 365 of 366: fontconfig-config:amd64=2.15.0-2.3 Downloading dependency 366 of 366: r-cran-curl:amd64=6.2.1+dfsg-1 env --chdir=/srv/rebuilderd/tmp/rebuilderdCFStT7/out DEB_BUILD_OPTIONS=parallel=6 LANG=C.UTF-8 LC_COLLATE=C.UTF-8 LC_CTYPE=C.UTF-8 SOURCE_DATE_EPOCH=1745854086 SBUILD_CONFIG=/srv/rebuilderd/tmp/debrebuildNlr_4A/debrebuild.sbuildrc.lkjYAmf6cASC sbuild --build=amd64 --host=amd64 --no-source --arch-any --no-arch-all --chroot=/srv/rebuilderd/tmp/debrebuildNlr_4A/debrebuild.tar.prxGNVVvIRna --chroot-mode=unshare --dist=unstable --no-run-lintian --no-run-piuparts --no-run-autopkgtest --no-apt-update --no-apt-upgrade --no-apt-distupgrade --verbose --nolog --bd-uninstallable-explainer= --build-path=/build/reproducible-path --dsc-dir=r-bioc-grohmm-1.40.3 /srv/rebuilderd/tmp/rebuilderdCFStT7/inputs/r-bioc-grohmm_1.40.3-3.dsc I: consider moving your ~/.sbuildrc to /srv/rebuilderd/.config/sbuild/config.pl The Debian buildds switched to the "unshare" backend and sbuild will default to it in the future. To start using "unshare" add this to your `~/.config/sbuild/config.pl`: $chroot_mode = "unshare"; If you want to keep the old "schroot" mode even in the future, add the following to your `~/.config/sbuild/config.pl`: $chroot_mode = "schroot"; $schroot = "schroot"; sbuild (Debian sbuild) 0.89.3 (07 June 2025) on osuosl4-amd64.reproducible.osuosl.org +==============================================================================+ | r-bioc-grohmm 1.40.3-3 (amd64) Sat, 09 Aug 2025 21:22:52 +0000 | +==============================================================================+ Package: r-bioc-grohmm Version: 1.40.3-3 Source Version: 1.40.3-3 Distribution: unstable Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 Build Type: any I: No tarballs found in /srv/rebuilderd/.cache/sbuild I: Unpacking /srv/rebuilderd/tmp/debrebuildNlr_4A/debrebuild.tar.prxGNVVvIRna to /srv/rebuilderd/tmp/tmp.sbuild.vY9sy5rZAx... I: Setting up the chroot... I: Creating chroot session... I: Setting up log color... I: Setting up apt archive... +------------------------------------------------------------------------------+ | Fetch source files Sat, 09 Aug 2025 21:23:01 +0000 | +------------------------------------------------------------------------------+ Local sources ------------- /srv/rebuilderd/tmp/rebuilderdCFStT7/inputs/r-bioc-grohmm_1.40.3-3.dsc exists in /srv/rebuilderd/tmp/rebuilderdCFStT7/inputs; copying to chroot +------------------------------------------------------------------------------+ | Install package build dependencies Sat, 09 Aug 2025 21:23:02 +0000 | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), dh-r, r-base-dev, r-cran-mass, r-bioc-s4vectors, r-bioc-iranges, r-bioc-genomeinfodb, r-bioc-genomicranges, r-bioc-genomicalignments, r-bioc-rtracklayer, architecture-is-64-bit, build-essential Filtered Build-Depends: debhelper-compat (= 13), dh-r, r-base-dev, r-cran-mass, r-bioc-s4vectors, r-bioc-iranges, r-bioc-genomeinfodb, r-bioc-genomicranges, r-bioc-genomicalignments, r-bioc-rtracklayer, architecture-is-64-bit, build-essential dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/build/reproducible-path/resolver-Fcop4j/apt_archive/sbuild-build-depends-main-dummy.deb'. Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies +------------------------------------------------------------------------------+ | Check architectures Sat, 09 Aug 2025 21:23:06 +0000 | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in any) +------------------------------------------------------------------------------+ | Build environment Sat, 09 Aug 2025 21:23:07 +0000 | +------------------------------------------------------------------------------+ Kernel: Linux 6.12.38+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.38-1 (2025-07-16) amd64 (x86_64) Toolchain package versions: binutils_2.44-3 dpkg-dev_1.22.18 g++-14_14.2.0-19 gcc-14_14.2.0-19 libc6-dev_2.41-7 libstdc++-14-dev_14.2.0-19 libstdc++6_14.2.0-19 linux-libc-dev_6.12.25-1 Package versions: architecture-properties_0.2.6 autoconf_2.72-3.1 automake_1:1.17-4 autopoint_0.23.1-2 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r-bioc-biocparallel_1.40.0-2 r-bioc-biostrings_2.74.1+dfsg-2 r-bioc-delayedarray_0.32.0+dfsg-2 r-bioc-genomeinfodb_1.42.3+dfsg-1 r-bioc-genomeinfodbdata_1.2.13-2 r-bioc-genomicalignments_1.42.0-2 r-bioc-genomicranges_1.58.0+dfsg-2 r-bioc-iranges_2.40.1-3 r-bioc-matrixgenerics_1.18.1-1 r-bioc-rhtslib_3.2.0+dfsg-2 r-bioc-rsamtools_2.22.0+dfsg-2 r-bioc-rtracklayer_1.66.0-3 r-bioc-s4arrays_1.6.0+dfsg-2 r-bioc-s4vectors_0.44.0+dfsg-2 r-bioc-sparsearray_1.6.2+dfsg-2 r-bioc-summarizedexperiment_1.36.0+dfsg-2 r-bioc-ucsc.utils_1.2.0+ds-2 r-bioc-xvector_0.46.0-2 r-bioc-zlibbioc_1.52.0+dfsg-2 r-cran-abind_1.4-8-1 r-cran-askpass_1.2.1-1 r-cran-bh_1.84.0-1 r-cran-bitops_1.0-9-1 r-cran-codetools_0.2-20-1 r-cran-cpp11_0.5.2-1 r-cran-crayon_1.5.3-1 r-cran-curl_6.2.1+dfsg-1 r-cran-formatr_1.14-2 r-cran-futile.logger_1.4.3-4 r-cran-futile.options_1.0.1-3 r-cran-httr_1.4.7+dfsg-1 r-cran-jsonlite_1.9.1+dfsg-1 r-cran-lambda.r_1.2.4-2 r-cran-lattice_0.22-7-1 r-cran-mass_7.3-65-1 r-cran-matrix_1.7-3-1 r-cran-matrixstats_1.5.0-1 r-cran-mime_0.12-2 r-cran-openssl_2.3.2+dfsg-1 r-cran-r6_2.6.1-1 r-cran-rcurl_1.98-1.16+dfsg-1 r-cran-restfulr_0.0.15-1 r-cran-rjson_0.2.23-1 r-cran-snow_1:0.4.4-2 r-cran-sys_3.4.3-1 r-cran-xml_3.99-0.18-1 r-cran-yaml_2.3.10-1 readline-common_8.2-6 rpcsvc-proto_1.4.3-1 sed_4.9-2 sensible-utils_0.0.25 sysvinit-utils_3.14-4 tar_1.35+dfsg-3.1 tzdata_2025b-2 ucf_3.0051 unzip_6.0-29 util-linux_2.41-4 x11-common_1:7.7+24 xauth_1:1.1.2-1.1 xdg-utils_1.2.1-2 xz-utils_5.8.1-1 zip_3.0-15 zlib1g_1:1.3.dfsg+really1.3.1-1+b1 zlib1g-dev_1:1.3.dfsg+really1.3.1-1+b1 +------------------------------------------------------------------------------+ | Build Sat, 09 Aug 2025 21:23:07 +0000 | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: r-bioc-grohmm Binary: r-bioc-grohmm Architecture: any Version: 1.40.3-3 Maintainer: Debian R Packages Maintainers Uploaders: Steffen Moeller Homepage: https://bioconductor.org/packages/groHMM/ Standards-Version: 4.7.0 Vcs-Browser: https://salsa.debian.org/r-pkg-team/r-bioc-grohmm Vcs-Git: https://salsa.debian.org/r-pkg-team/r-bioc-grohmm.git Testsuite: autopkgtest-pkg-r Build-Depends: debhelper-compat (= 13), dh-r, r-base-dev, r-cran-mass, r-bioc-s4vectors, r-bioc-iranges, r-bioc-genomeinfodb, r-bioc-genomicranges, r-bioc-genomicalignments, r-bioc-rtracklayer, architecture-is-64-bit Package-List: r-bioc-grohmm deb gnu-r optional arch=any Checksums-Sha1: 0358716640ced4f05cabb91a8d36e335368c8db1 4364803 r-bioc-grohmm_1.40.3.orig.tar.gz e8265350b5166ad40d37ed1a5555408f9374707b 4556 r-bioc-grohmm_1.40.3-3.debian.tar.xz Checksums-Sha256: 2c5c187f42b084f304eeeb9fae11678de0d526780cb2cc9c5d21608533eda97f 4364803 r-bioc-grohmm_1.40.3.orig.tar.gz 34a18e569eff6d3cbfdf3f298cc2040331a045f0d9dba6b22f258505502fe549 4556 r-bioc-grohmm_1.40.3-3.debian.tar.xz Files: 9ded3cf3ec2c81b23ee1d65a4fe69422 4364803 r-bioc-grohmm_1.40.3.orig.tar.gz 394326ea1229cc2f2f6c99632fd0bbc1 4556 r-bioc-grohmm_1.40.3-3.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJMBAEBCgA2FiEEZ8sxEAXE7b4yF1MI3uUNDVZ+omYFAmgP5nwYHHJlYmVjY2Ff cGFsbWVyQHpvaG8uY29tAAoJEN7lDQ1WfqJmkesP/19WKu7/+PqUUycTGE7shxIx pMfp+cVWtlCaIkvQ2EIWGPaKF+zPr5eSszTcicqd2o4ZhXyo+9MBaXGbTTxQL67K orC2Jwfq+Ccjw5hXkguzKVdpMxVQPq5xP9QOCON+LWx34HxWz4ZgCrBU6G9Q4J0V QpXuK3y2mxpg1QXYtqpQBdfEXQnhQ4PcSEDp2fCS0vbRha6hALR4Z7Zi4SzHDK4H SdaAkfJOBXIAjsihRck1yQ6sHWXmynvv6VnIbjUBYDEsE/3nwzjLUKoyxB+id1Uw dq2HzrNzRJuoSw0KfmHAwVlNXDnY9E1fqxybSUnLMS7cOZDTJdXfQYpsqhigoXiS YIHt/1URQI3nyq0ELERbOQp7CrAukT7LhnOvVrFNJ9d0G0cyWpHlKexxwakuTf5N HiOCqMxJQgwaPH+eiCcjDcyjUm5yPYcm4wZLQDWEscFcXF91e6e5i3bQSJB6HeWi nnGhOXqFoPUbwCDr0byE8gcNSS3oNBWJ7hcmrCIt74aqzjsAlh3q912VHgGlHIVv yR1voTgAoF0KHWZEa0esgBXBJTe1Kv8pahMc0mbJsNe8VvX8zx1ww+9bEr5/58IV lc/bDuf0oI9j05mpPpbl5ackflX8U4A80VgLuXn9wyONWxsNQUKkg836P8CVSuou keTE8q4jiLqGhdFpJss+ =VN0o -----END PGP SIGNATURE----- dpkg-source: warning: cannot verify inline signature for ./r-bioc-grohmm_1.40.3-3.dsc: unsupported subcommand dpkg-source: info: extracting r-bioc-grohmm in /build/reproducible-path/r-bioc-grohmm-1.40.3 dpkg-source: info: unpacking r-bioc-grohmm_1.40.3.orig.tar.gz dpkg-source: info: unpacking r-bioc-grohmm_1.40.3-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying fix-FTBFS.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=6 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LC_COLLATE=C.UTF-8 LC_CTYPE=C.UTF-8 LOGNAME=sbuild PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SHELL=/bin/sh SOURCE_DATE_EPOCH=1745854086 USER=sbuild dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -us -uc -B dpkg-buildpackage: info: source package r-bioc-grohmm dpkg-buildpackage: info: source version 1.40.3-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Rebecca N. Palmer dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --buildsystem R dh_auto_clean -O--buildsystem=R dh_autoreconf_clean -O--buildsystem=R dh_clean -O--buildsystem=R debian/rules binary-arch dh binary-arch --buildsystem R dh_update_autotools_config -a -O--buildsystem=R dh_autoreconf -a -O--buildsystem=R dh_auto_configure -a -O--buildsystem=R dh_auto_build -a -O--buildsystem=R dh_auto_test -a -O--buildsystem=R create-stamp debian/debhelper-build-stamp dh_testroot -a -O--buildsystem=R dh_prep -a -O--buildsystem=R dh_auto_install --destdir=debian/r-bioc-grohmm/ -a -O--buildsystem=R I: R Package: groHMM Version: 1.40.3 I: Building using R version 4.5.0-2 I: R API version: r-api-4.0 I: Using built-time from d/changelog: Mon, 28 Apr 2025 16:28:06 +0100 mkdir -p /build/reproducible-path/r-bioc-grohmm-1.40.3/debian/r-bioc-grohmm/usr/lib/R/site-library R CMD INSTALL -l /build/reproducible-path/r-bioc-grohmm-1.40.3/debian/r-bioc-grohmm/usr/lib/R/site-library --clean . "--built-timestamp='Mon, 28 Apr 2025 16:28:06 +0100'" * installing *source* package ‘groHMM’ ... ** this is package ‘groHMM’ version ‘1.40.3’ files ‘src/DecayAlgorithm.c’, ‘src/hmmMiscFunctions.c’ have the wrong MD5 checksums ** using staged installation ** libs using C compiler: ‘gcc (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/build/reproducible-path/r-bioc-grohmm-1.40.3/src' gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -c AnnotateProbes.c -o AnnotateProbes.o gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -c DecayAlgorithm.c -o DecayAlgorithm.o gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -c MLEfit.c -o MLEfit.o gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -c RegisterRRoutines.c -o RegisterRRoutines.o gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -c Windowing.c -o Windowing.o gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -c hmmEM.c -o hmmEM.o gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -c hmmFwBw.c -o hmmFwBw.o gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -c hmmMiscFunctions.c -o hmmMiscFunctions.o hmmMiscFunctions.c: In function ‘SStatsGamma’: hmmMiscFunctions.c:235:37: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘double’ [-Wformat=] 235 | if(!(logPP <= epsilon)) Rprintf("[SSallocGamma] -- \ | ^~~~~~~~~~~~~~~~~~~~ 236 | Assertion about to fail! logPP= %d\n", logPP); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~ | | | double gcc -std=gnu23 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -c hmmViterbi.c -o hmmViterbi.o gcc -std=gnu23 -shared -L/usr/lib/R/lib -Wl,-z,relro -o groHMM.so AnnotateProbes.o DecayAlgorithm.o MLEfit.o RegisterRRoutines.o Windowing.o hmmEM.o hmmFwBw.o hmmMiscFunctions.o hmmViterbi.o -L/usr/lib/R/lib -lR make[1]: Leaving directory '/build/reproducible-path/r-bioc-grohmm-1.40.3/src' make[1]: Entering directory '/build/reproducible-path/r-bioc-grohmm-1.40.3/src' make[1]: Leaving directory '/build/reproducible-path/r-bioc-grohmm-1.40.3/src' installing to /build/reproducible-path/r-bioc-grohmm-1.40.3/debian/r-bioc-grohmm/usr/lib/R/site-library/00LOCK-r-bioc-grohmm-1.40.3/00new/groHMM/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (groHMM) /bin/sh: 1: apt-cache: not found grep-aptavail: command (apt-cache dumpavail) failed (exit status 127) W: Ignoring specified R dependency: R (>= 3.0.2) I: Using r-cran-mass for Depends:MASS I: Using r-bioc-s4vectors for Depends:S4Vectors (>= 0.17.25) I: Using r-bioc-iranges for Depends:IRanges (>= 2.13.12) I: Using r-bioc-genomeinfodb for Depends:GenomeInfoDb I: Using r-bioc-genomicranges for Depends:GenomicRanges (>= 1.31.8) I: Using r-bioc-genomicalignments for Depends:GenomicAlignments (>= 1.15.6) I: Using r-bioc-rtracklayer for Depends:rtracklayer (>= 1.39.7) W: Cannot find a debian package for Suggests:BiocStyle W: Cannot find a debian package for Suggests:GenomicFeatures W: Cannot find a debian package for Suggests:edgeR W: Cannot find a debian package for Suggests:org.Hs.eg.db W: Cannot find a debian package for Suggests:TxDb.Hsapiens.UCSC.hg19.knownGene I: BioConductor API version: r-api-bioc-3.20 I: Use r-bioc-grohmm as Debian binary package for variables substitution dh_installdocs -a -O--buildsystem=R dh_installchangelogs -a -O--buildsystem=R dh_installsystemduser -a -O--buildsystem=R dh_perl -a -O--buildsystem=R dh_link -a -O--buildsystem=R dh_strip_nondeterminism -a -O--buildsystem=R dh_compress -a -O--buildsystem=R dh_fixperms -a -O--buildsystem=R dh_missing -a -O--buildsystem=R dh_dwz -a -O--buildsystem=R dh_strip -a -O--buildsystem=R dh_makeshlibs -a -O--buildsystem=R dh_shlibdeps -a -O--buildsystem=R dh_installdeb -a -O--buildsystem=R dh_gencontrol -a -O--buildsystem=R dh_md5sums -a -O--buildsystem=R dh_builddeb -a -O--buildsystem=R dpkg-deb: building package 'r-bioc-grohmm' in '../r-bioc-grohmm_1.40.3-3_amd64.deb'. dpkg-deb: building package 'r-bioc-grohmm-dbgsym' in '../r-bioc-grohmm-dbgsym_1.40.3-3_amd64.deb'. dpkg-genbuildinfo --build=any -O../r-bioc-grohmm_1.40.3-3_amd64.buildinfo dpkg-genchanges --build=any -O../r-bioc-grohmm_1.40.3-3_amd64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2025-08-09T21:23:55Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes Sat, 09 Aug 2025 21:23:55 +0000 | +------------------------------------------------------------------------------+ r-bioc-grohmm_1.40.3-3_amd64.changes: ------------------------------------- Format: 1.8 Date: Mon, 28 Apr 2025 16:28:06 +0100 Source: r-bioc-grohmm Binary: r-bioc-grohmm r-bioc-grohmm-dbgsym Architecture: amd64 Version: 1.40.3-3 Distribution: unstable Urgency: medium Maintainer: Debian R Packages Maintainers Changed-By: Rebecca N. Palmer Description: r-bioc-grohmm - GRO-seq Analysis Pipeline Closes: 1103227 Changes: r-bioc-grohmm (1.40.3-3) unstable; urgency=medium . * Team upload. * Be compatible with R 4.5, thanks to Li Wenjun. (Closes: #1103227) Checksums-Sha1: 3a5347763c89097f8cb10cfc2e77ddfb7d741056 53760 r-bioc-grohmm-dbgsym_1.40.3-3_amd64.deb c4f429e02835317dde71c8e32be173b99839102d 11802 r-bioc-grohmm_1.40.3-3_amd64.buildinfo ff08057bd825b88012ac0c1dc986c7981a7fbf4d 4454456 r-bioc-grohmm_1.40.3-3_amd64.deb Checksums-Sha256: 7b0f6c4e1f83cc227d3c9e32ce36f8caecfb59eff7cc65b0b3f9e21b19114941 53760 r-bioc-grohmm-dbgsym_1.40.3-3_amd64.deb be51eac567d13d5250dadf1da31407ce26127683298d11d67153389371210071 11802 r-bioc-grohmm_1.40.3-3_amd64.buildinfo f9bf92b09cba54994af0fcebbcb585f6b227704eed79e97777c030f83620164a 4454456 r-bioc-grohmm_1.40.3-3_amd64.deb Files: ba2254f172a8f06750767574c963b757 53760 debug optional r-bioc-grohmm-dbgsym_1.40.3-3_amd64.deb b32368f22099ee34977c06d5f01fdba8 11802 gnu-r optional r-bioc-grohmm_1.40.3-3_amd64.buildinfo 1592bd94d5cafe3d3497d11fdab95f51 4454456 gnu-r optional r-bioc-grohmm_1.40.3-3_amd64.deb +------------------------------------------------------------------------------+ | Buildinfo Sat, 09 Aug 2025 21:23:56 +0000 | +------------------------------------------------------------------------------+ Format: 1.0 Source: r-bioc-grohmm Binary: r-bioc-grohmm r-bioc-grohmm-dbgsym Architecture: amd64 Version: 1.40.3-3 Checksums-Md5: ba2254f172a8f06750767574c963b757 53760 r-bioc-grohmm-dbgsym_1.40.3-3_amd64.deb 1592bd94d5cafe3d3497d11fdab95f51 4454456 r-bioc-grohmm_1.40.3-3_amd64.deb Checksums-Sha1: 3a5347763c89097f8cb10cfc2e77ddfb7d741056 53760 r-bioc-grohmm-dbgsym_1.40.3-3_amd64.deb ff08057bd825b88012ac0c1dc986c7981a7fbf4d 4454456 r-bioc-grohmm_1.40.3-3_amd64.deb Checksums-Sha256: 7b0f6c4e1f83cc227d3c9e32ce36f8caecfb59eff7cc65b0b3f9e21b19114941 53760 r-bioc-grohmm-dbgsym_1.40.3-3_amd64.deb f9bf92b09cba54994af0fcebbcb585f6b227704eed79e97777c030f83620164a 4454456 r-bioc-grohmm_1.40.3-3_amd64.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Sat, 09 Aug 2025 21:23:54 +0000 Build-Path: /build/reproducible-path/r-bioc-grohmm-1.40.3 Installed-Build-Depends: architecture-properties (= 0.2.6), autoconf (= 2.72-3.1), automake (= 1:1.17-4), autopoint (= 0.23.1-2), autotools-dev (= 20240727.1), base-files (= 13.7), base-passwd (= 3.6.7), bash (= 5.2.37-2), binutils (= 2.44-3), binutils-common (= 2.44-3), binutils-x86-64-linux-gnu (= 2.44-3), bsdextrautils (= 2.41-4), bsdutils (= 1:2.41-4), build-essential (= 12.12), bzip2 (= 1.0.8-6), ca-certificates (= 20250419), coreutils (= 9.7-2), cpp (= 4:14.2.0-1), cpp-14 (= 14.2.0-19), cpp-14-x86-64-linux-gnu (= 14.2.0-19), cpp-x86-64-linux-gnu (= 4:14.2.0-1), dash (= 0.5.12-12), dctrl-tools (= 2.24-3+b1), debconf (= 1.5.91), debhelper (= 13.24.2), debianutils (= 5.22), dh-autoreconf (= 20), dh-r (= 20241218), dh-strip-nondeterminism (= 1.14.1-2), diffutils (= 1:3.10-4), dpkg (= 1.22.18), dpkg-dev (= 1.22.18), dwz (= 0.15-1+b1), file (= 1:5.46-5), findutils (= 4.10.0-3), fontconfig (= 2.15.0-2.3), fontconfig-config (= 2.15.0-2.3), fonts-dejavu-core (= 2.37-8), fonts-dejavu-mono (= 2.37-8), g++ (= 4:14.2.0-1), g++-14 (= 14.2.0-19), g++-14-x86-64-linux-gnu (= 14.2.0-19), g++-x86-64-linux-gnu (= 4:14.2.0-1), gcc (= 4:14.2.0-1), gcc-14 (= 14.2.0-19), gcc-14-base (= 14.2.0-19), gcc-14-x86-64-linux-gnu (= 14.2.0-19), gcc-x86-64-linux-gnu (= 4:14.2.0-1), gettext (= 0.23.1-2), gettext-base (= 0.23.1-2), gfortran (= 4:14.2.0-1), gfortran-14 (= 14.2.0-19), gfortran-14-x86-64-linux-gnu (= 14.2.0-19), gfortran-x86-64-linux-gnu (= 4:14.2.0-1), grep (= 3.11-4), groff-base (= 1.23.0-7), gzip (= 1.13-1), hostname (= 3.25), icu-devtools (= 76.1-3), init-system-helpers (= 1.68), intltool-debian (= 0.35.0+20060710.6), libacl1 (= 2.3.2-2+b1), libalgorithm-c3-perl (= 0.11-2), libarchive-zip-perl (= 1.68-1), libasan8 (= 14.2.0-19), libatomic1 (= 14.2.0-19), libattr1 (= 1:2.5.2-3), libaudit-common (= 1:4.0.2-2), libaudit1 (= 1:4.0.2-2+b2), libb-hooks-endofscope-perl (= 0.28-1), libb-hooks-op-check-perl (= 0.22-3+b2), libbinutils (= 2.44-3), libblas-dev (= 3.12.1-2), libblas3 (= 3.12.1-2), libblkid1 (= 2.41-4), libboost-dev (= 1.83.0.2+b2), libboost1.83-dev (= 1.83.0-4.2), libbrotli1 (= 1.1.0-2+b7), libbz2-1.0 (= 1.0.8-6), libbz2-dev (= 1.0.8-6), libc-bin (= 2.41-7), libc-dev-bin (= 2.41-7), libc6 (= 2.41-7), libc6-dev (= 2.41-7), libcairo2 (= 1.18.4-1+b1), libcap-ng0 (= 0.8.5-4+b1), libcap2 (= 1:2.75-7), libcc1-0 (= 14.2.0-19), libclass-c3-perl (= 0.35-2), libclass-load-perl (= 0.25-2), libclass-load-xs-perl (= 0.10-2+b4), libclone-perl (= 0.47-1+b1), libcom-err2 (= 1.47.2-1+b1), libcrypt-dev (= 1:4.4.38-1), libcrypt1 (= 1:4.4.38-1), libctf-nobfd0 (= 2.44-3), libctf0 (= 2.44-3), libcurl3t64-gnutls (= 8.13.0-5), libcurl4t64 (= 8.13.0-5), libdata-optlist-perl (= 0.114-1), libdatrie1 (= 0.2.13-3+b1), libdb5.3t64 (= 5.3.28+dfsg2-9), libdebconfclient0 (= 0.278), libdebhelper-perl (= 13.24.2), libdeflate-dev (= 1.23-2), libdeflate0 (= 1.23-2), libdevel-callchecker-perl (= 0.009-2), libdevel-globaldestruction-perl (= 0.14-4), libdevel-overloadinfo-perl (= 0.007-1), libdevel-stacktrace-perl (= 2.0500-1), libdist-checkconflicts-perl (= 0.11-2), libdpkg-perl (= 1.22.18), libdynaloader-functions-perl (= 0.004-2), libelf1t64 (= 0.192-4), libencode-locale-perl (= 1.05-3), libeval-closure-perl (= 0.14-3), libexpat1 (= 2.7.1-1), libffi8 (= 3.4.8-2), libfile-stripnondeterminism-perl (= 1.14.1-2), libfile-which-perl (= 1.27-2), libfontconfig1 (= 2.15.0-2.3), libfreetype6 (= 2.13.3+dfsg-1), libfribidi0 (= 1.0.16-1), libgcc-14-dev (= 14.2.0-19), libgcc-s1 (= 14.2.0-19), libgdbm-compat4t64 (= 1.24-2), libgdbm6t64 (= 1.24-2), libgfortran-14-dev (= 14.2.0-19), libgfortran5 (= 14.2.0-19), libglib2.0-0t64 (= 2.84.1-2), libgmp10 (= 2:6.3.0+dfsg-3), libgnutls30t64 (= 3.8.9-2), libgomp1 (= 14.2.0-19), libgprofng0 (= 2.44-3), libgraphite2-3 (= 1.3.14-2+b1), libgssapi-krb5-2 (= 1.21.3-5), libharfbuzz0b (= 10.2.0-1+b1), libhogweed6t64 (= 3.10.1-1), libhttp-date-perl (= 6.06-1), libhttp-message-perl (= 7.00-2), libhwasan0 (= 14.2.0-19), libice6 (= 2:1.1.1-1), libicu-dev (= 76.1-3), libicu76 (= 76.1-3), libidn2-0 (= 2.3.8-2), libio-html-perl (= 1.004-3), libisl23 (= 0.27-1), libitm1 (= 14.2.0-19), libjansson4 (= 2.14-2+b3), libjbig0 (= 2.1-6.1+b2), libjpeg-dev (= 1:2.1.5-3.1), libjpeg62-turbo (= 1:2.1.5-3.1), libjpeg62-turbo-dev (= 1:2.1.5-3.1), libk5crypto3 (= 1.21.3-5), libkeyutils1 (= 1.6.3-6), libkrb5-3 (= 1.21.3-5), libkrb5support0 (= 1.21.3-5), liblapack-dev (= 3.12.1-2), liblapack3 (= 3.12.1-2), liblastlog2-2 (= 2.41-4), libldap2 (= 2.6.9+dfsg-2), liblerc4 (= 4.0.0+ds-5), liblsan0 (= 14.2.0-19), liblwp-mediatypes-perl (= 6.04-2), liblzma-dev (= 5.8.1-1), liblzma5 (= 5.8.1-1), libmagic-mgc (= 1:5.46-5), libmagic1t64 (= 1:5.46-5), libmd0 (= 1.1.0-2+b1), libmodule-implementation-perl (= 0.09-2), libmodule-runtime-conflicts-perl (= 0.003-2), libmodule-runtime-perl (= 0.018-1), libmoose-perl (= 2.2207-1+b3), libmount1 (= 2.41-4), libmpc3 (= 1.3.1-1+b3), libmpfr6 (= 4.2.2-1), libmro-compat-perl (= 0.15-2), libnamespace-clean-perl (= 0.27-2), libncurses-dev (= 6.5+20250216-2), libncurses6 (= 6.5+20250216-2), libncursesw6 (= 6.5+20250216-2), libnettle8t64 (= 3.10.1-1), libnghttp2-14 (= 1.64.0-1.1), libnghttp3-9 (= 1.8.0-1), libngtcp2-16 (= 1.11.0-1), libngtcp2-crypto-gnutls8 (= 1.11.0-1), libp11-kit0 (= 0.25.5-3), libpackage-deprecationmanager-perl (= 0.18-1), libpackage-stash-perl (= 0.40-1), libpackage-stash-xs-perl (= 0.30-1+b4), libpam-modules (= 1.7.0-3), libpam-modules-bin (= 1.7.0-3), libpam-runtime (= 1.7.0-3), libpam0g (= 1.7.0-3), libpango-1.0-0 (= 1.56.3-1), libpangocairo-1.0-0 (= 1.56.3-1), libpangoft2-1.0-0 (= 1.56.3-1), libpaper-utils (= 2.2.5-0.3+b2), libpaper2 (= 2.2.5-0.3+b2), libparams-classify-perl (= 0.015-2+b4), libparams-util-perl (= 1.102-3+b1), libpcre2-16-0 (= 10.45-1), libpcre2-32-0 (= 10.45-1), libpcre2-8-0 (= 10.45-1), libpcre2-dev (= 10.45-1), libpcre2-posix3 (= 10.45-1), libperl5.40 (= 5.40.1-3), libpipeline1 (= 1.5.8-1), libpixman-1-0 (= 0.44.0-3), libpkgconf3 (= 1.8.1-4), libpng-dev (= 1.6.47-1.1), libpng16-16t64 (= 1.6.47-1.1), libproc2-0 (= 2:4.0.4-8), libpsl5t64 (= 0.21.2-1.1+b1), libquadmath0 (= 14.2.0-19), libreadline-dev (= 8.2-6), libreadline8t64 (= 8.2-6), librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b5), libsasl2-2 (= 2.1.28+dfsg1-9), libsasl2-modules-db (= 2.1.28+dfsg1-9), libseccomp2 (= 2.6.0-2), libselinux1 (= 3.8.1-1), libsframe1 (= 2.44-3), libsharpyuv0 (= 1.5.0-0.1), libsm6 (= 2:1.2.6-1), libsmartcols1 (= 2.41-4), libsqlite3-0 (= 3.46.1-3), libssh2-1t64 (= 1.11.1-1), libssl3t64 (= 3.5.0-1), libstdc++-14-dev (= 14.2.0-19), libstdc++6 (= 14.2.0-19), libsub-exporter-perl (= 0.990-1), libsub-exporter-progressive-perl (= 0.001013-3), libsub-identify-perl (= 0.14-3+b3), libsub-install-perl (= 0.929-1), libsub-name-perl (= 0.28-1), libswitch-perl (= 2.17-3), libsystemd0 (= 257.5-2), libtasn1-6 (= 4.20.0-2), libtcl8.6 (= 8.6.16+dfsg-1), libtext-charwidth-perl (= 0.04-11+b4), libtext-wrapi18n-perl (= 0.06-10), libthai-data (= 0.1.29-2), libthai0 (= 0.1.29-2+b1), libtiff6 (= 4.7.0-3), libtimedate-perl (= 2.3300-2), libtinfo6 (= 6.5+20250216-2), libtirpc-common (= 1.3.6+ds-1), libtirpc-dev (= 1.3.6+ds-1), libtirpc3t64 (= 1.3.6+ds-1), libtk8.6 (= 8.6.16-1), libtool (= 2.5.4-4), libtry-tiny-perl (= 0.32-1), libtsan2 (= 14.2.0-19), libubsan1 (= 14.2.0-19), libuchardet0 (= 0.0.8-1+b2), libudev1 (= 257.5-2), libunistring5 (= 1.3-2), liburi-perl (= 5.30-1), libuuid1 (= 2.41-4), libvariable-magic-perl (= 0.64-1+b1), libwebp7 (= 1.5.0-0.1), libwww-curl-perl (= 4.17-12), libwww-curl-simple-perl (= 0.100191-3), libx11-6 (= 2:1.8.12-1), libx11-data (= 2:1.8.12-1), libxau6 (= 1:1.0.11-1), libxcb-render0 (= 1.17.0-2+b1), libxcb-shm0 (= 1.17.0-2+b1), libxcb1 (= 1.17.0-2+b1), libxdmcp6 (= 1:1.1.5-1), libxext6 (= 2:1.3.4-1+b3), libxft2 (= 2.3.6-1+b4), libxml2 (= 2.12.7+dfsg+really2.9.14-0.4), libxmuu1 (= 2:1.1.3-3+b4), libxrender1 (= 1:0.9.12-1), libxss1 (= 1:1.2.3-1+b3), libxt6t64 (= 1:1.2.1-1.2+b2), libzstd-dev (= 1.5.7+dfsg-1), libzstd1 (= 1.5.7+dfsg-1), 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1.66.0-3), r-bioc-s4arrays (= 1.6.0+dfsg-2), r-bioc-s4vectors (= 0.44.0+dfsg-2), r-bioc-sparsearray (= 1.6.2+dfsg-2), r-bioc-summarizedexperiment (= 1.36.0+dfsg-2), r-bioc-ucsc.utils (= 1.2.0+ds-2), r-bioc-xvector (= 0.46.0-2), r-bioc-zlibbioc (= 1.52.0+dfsg-2), r-cran-abind (= 1.4-8-1), r-cran-askpass (= 1.2.1-1), r-cran-bh (= 1.84.0-1), r-cran-bitops (= 1.0-9-1), r-cran-codetools (= 0.2-20-1), r-cran-cpp11 (= 0.5.2-1), r-cran-crayon (= 1.5.3-1), r-cran-curl (= 6.2.1+dfsg-1), r-cran-formatr (= 1.14-2), r-cran-futile.logger (= 1.4.3-4), r-cran-futile.options (= 1.0.1-3), r-cran-httr (= 1.4.7+dfsg-1), r-cran-jsonlite (= 1.9.1+dfsg-1), r-cran-lambda.r (= 1.2.4-2), r-cran-lattice (= 0.22-7-1), r-cran-mass (= 7.3-65-1), r-cran-matrix (= 1.7-3-1), r-cran-matrixstats (= 1.5.0-1), r-cran-mime (= 0.12-2), r-cran-openssl (= 2.3.2+dfsg-1), r-cran-r6 (= 2.6.1-1), r-cran-rcurl (= 1.98-1.16+dfsg-1), r-cran-restfulr (= 0.0.15-1), r-cran-rjson (= 0.2.23-1), r-cran-snow (= 1:0.4.4-2), r-cran-sys (= 3.4.3-1), r-cran-xml (= 3.99-0.18-1), r-cran-yaml (= 2.3.10-1), readline-common (= 8.2-6), rpcsvc-proto (= 1.4.3-1), sed (= 4.9-2), sensible-utils (= 0.0.25), sysvinit-utils (= 3.14-4), tar (= 1.35+dfsg-3.1), tzdata (= 2025b-2), ucf (= 3.0051), unzip (= 6.0-29), util-linux (= 2.41-4), x11-common (= 1:7.7+24), xauth (= 1:1.1.2-1.1), xdg-utils (= 1.2.1-2), xz-utils (= 5.8.1-1), zip (= 3.0-15), zlib1g (= 1:1.3.dfsg+really1.3.1-1+b1), zlib1g-dev (= 1:1.3.dfsg+really1.3.1-1+b1) Environment: DEB_BUILD_OPTIONS="parallel=6" LANG="C.UTF-8" LC_COLLATE="C.UTF-8" LC_CTYPE="C.UTF-8" SOURCE_DATE_EPOCH="1745854086" +------------------------------------------------------------------------------+ | Package contents Sat, 09 Aug 2025 21:23:56 +0000 | +------------------------------------------------------------------------------+ r-bioc-grohmm-dbgsym_1.40.3-3_amd64.deb --------------------------------------- new Debian package, version 2.0. size 53760 bytes: control archive=536 bytes. 389 bytes, 12 lines control 106 bytes, 1 lines md5sums Package: r-bioc-grohmm-dbgsym Source: r-bioc-grohmm Version: 1.40.3-3 Auto-Built-Package: debug-symbols Architecture: amd64 Maintainer: Debian R Packages Maintainers Installed-Size: 68 Depends: r-bioc-grohmm (= 1.40.3-3) Section: debug Priority: optional Description: debug symbols for r-bioc-grohmm Build-Ids: 900657fce1fa071e994ccee6a4f4283bfc4346ac drwxr-xr-x root/root 0 2025-04-28 15:28 ./ drwxr-xr-x root/root 0 2025-04-28 15:28 ./usr/ drwxr-xr-x root/root 0 2025-04-28 15:28 ./usr/lib/ drwxr-xr-x root/root 0 2025-04-28 15:28 ./usr/lib/debug/ drwxr-xr-x root/root 0 2025-04-28 15:28 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2025-04-28 15:28 ./usr/lib/debug/.build-id/90/ -rw-r--r-- root/root 58936 2025-04-28 15:28 ./usr/lib/debug/.build-id/90/0657fce1fa071e994ccee6a4f4283bfc4346ac.debug drwxr-xr-x root/root 0 2025-04-28 15:28 ./usr/share/ drwxr-xr-x root/root 0 2025-04-28 15:28 ./usr/share/doc/ lrwxrwxrwx root/root 0 2025-04-28 15:28 ./usr/share/doc/r-bioc-grohmm-dbgsym -> r-bioc-grohmm r-bioc-grohmm_1.40.3-3_amd64.deb -------------------------------- new Debian package, version 2.0. size 4454456 bytes: control archive=1812 bytes. 1120 bytes, 20 lines control 2503 bytes, 32 lines md5sums Package: r-bioc-grohmm Version: 1.40.3-3 Architecture: amd64 Maintainer: Debian R Packages Maintainers Installed-Size: 4521 Depends: r-api-4.0, r-api-bioc-3.20, r-cran-mass, r-bioc-s4vectors (>= 0.17.25), r-bioc-iranges (>= 2.13.12), r-bioc-genomeinfodb, r-bioc-genomicranges (>= 1.31.8), r-bioc-genomicalignments (>= 1.15.6), r-bioc-rtracklayer (>= 1.39.7), libc6 (>= 2.4) Section: gnu-r Priority: optional Homepage: https://bioconductor.org/packages/groHMM/ Description: GRO-seq Analysis Pipeline This BioConductor package provides a pipeline for the analysis of GRO- seq data. Among the more advanced features, r-bioc-grohmm predicts the boundaries of transcriptional activity across the genome de novo using a two-state hidden Markov model (HMM). . The used model essentially divides the genome into transcribed and non- transcribed regions in a strand specific manner. HMMs are used to identify the leading edge of Pol II at genes activated by a stimulus in GRO-seq time course data. 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./usr/share/doc/r-bioc-grohmm/copyright +------------------------------------------------------------------------------+ | Post Build Sat, 09 Aug 2025 21:23:58 +0000 | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup Sat, 09 Aug 2025 21:23:58 +0000 | +------------------------------------------------------------------------------+ Purging /build/reproducible-path Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary Sat, 09 Aug 2025 21:24:00 +0000 | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Type: any Build-Space: 14112 Build-Time: 47 Distribution: unstable Host Architecture: amd64 Install-Time: 4 Job: /srv/rebuilderd/tmp/rebuilderdCFStT7/inputs/r-bioc-grohmm_1.40.3-3.dsc Machine Architecture: amd64 Package: 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