=============================================================================== About this build: this rebuild has been done as part of reproduce.debian.net where we aim to reproduce Debian binary packages distributed via ftp.debian.org, by rebuilding using the exact same packages as the original build on the buildds, as described in the relevant .buildinfo file from buildinfos.debian.net. For more information please go to https://reproduce.debian.net or join #debian-reproducible on irc.debian.org =============================================================================== Preparing download of sources for /srv/rebuilderd/tmp/rebuilderdyDrFbZ/inputs/mrtrix3_3.0.8-1_amd64.buildinfo Source: mrtrix3 Version: 3.0.8-1 rebuilderd-worker node: osuosl42-amd64 +------------------------------------------------------------------------------+ | Downloading sources Wed, 17 Dec 2025 21:16:55 +0000 | +------------------------------------------------------------------------------+ Get:1 https://deb.debian.org/debian trixie InRelease [140 kB] Get:2 https://deb.debian.org/debian-security trixie-security InRelease [43.4 kB] Get:3 https://deb.debian.org/debian trixie-updates InRelease [47.3 kB] Get:4 https://deb.debian.org/debian trixie-proposed-updates InRelease [57.5 kB] Get:5 https://deb.debian.org/debian trixie-backports InRelease [54.0 kB] Get:6 https://deb.debian.org/debian forky InRelease [137 kB] Get:7 https://deb.debian.org/debian sid InRelease [186 kB] Get:8 https://deb.debian.org/debian experimental InRelease [90.7 kB] Get:9 https://deb.debian.org/debian trixie/main Sources [10.5 MB] Get:10 https://deb.debian.org/debian trixie/non-free-firmware Sources [6,548 B] Get:11 https://deb.debian.org/debian-security trixie-security/main Sources [113 kB] Get:12 https://deb.debian.org/debian-security trixie-security/non-free-firmware Sources [696 B] Get:13 https://deb.debian.org/debian trixie-updates/main Sources [2,788 B] Get:14 https://deb.debian.org/debian trixie-proposed-updates/main Sources [63.5 kB] Get:15 https://deb.debian.org/debian trixie-backports/main Sources [110 kB] Get:16 https://deb.debian.org/debian trixie-backports/non-free-firmware Sources [2,468 B] Get:17 https://deb.debian.org/debian forky/main Sources [10.6 MB] Get:18 https://deb.debian.org/debian forky/non-free-firmware Sources [7,696 B] Get:19 https://deb.debian.org/debian sid/non-free-firmware Sources [9,692 B] Get:20 https://deb.debian.org/debian sid/main Sources [11.2 MB] Get:21 https://deb.debian.org/debian experimental/non-free-firmware Sources [3,180 B] Get:22 https://deb.debian.org/debian experimental/main Sources [362 kB] Fetched 33.8 MB in 5s (7,338 kB/s) Reading package lists... 'https://deb.debian.org/debian/pool/main/m/mrtrix3/mrtrix3_3.0.8-1.dsc' mrtrix3_3.0.8-1.dsc 2266 SHA256:0da5b6e64eefb74949bf6bbd2fddb811684928c71e82631fca57590aef47a41d 'https://deb.debian.org/debian/pool/main/m/mrtrix3/mrtrix3_3.0.8.orig.tar.gz' mrtrix3_3.0.8.orig.tar.gz 4057854 SHA256:7ca0ec513fe32421f453b8bdc5a7355a4563fd0247eea92fd5998ebd81a988aa 'https://deb.debian.org/debian/pool/main/m/mrtrix3/mrtrix3_3.0.8-1.debian.tar.xz' mrtrix3_3.0.8-1.debian.tar.xz 10320 SHA256:68a990486617c74f6e8bace10283308be390db8eb90015b4d9ce31d8e1b146e1 7ca0ec513fe32421f453b8bdc5a7355a4563fd0247eea92fd5998ebd81a988aa mrtrix3_3.0.8.orig.tar.gz 68a990486617c74f6e8bace10283308be390db8eb90015b4d9ce31d8e1b146e1 mrtrix3_3.0.8-1.debian.tar.xz 0da5b6e64eefb74949bf6bbd2fddb811684928c71e82631fca57590aef47a41d mrtrix3_3.0.8-1.dsc +------------------------------------------------------------------------------+ | Calling debrebuild Wed, 17 Dec 2025 21:17:01 +0000 | +------------------------------------------------------------------------------+ Rebuilding mrtrix3=3.0.8-1 in /srv/rebuilderd/tmp/rebuilderdyDrFbZ/inputs now. + nice /usr/bin/debrebuild --buildresult=/srv/rebuilderd/tmp/rebuilderdyDrFbZ/out --builder=sbuild+unshare --cache=/srv/rebuilderd/cache -- /srv/rebuilderd/tmp/rebuilderdyDrFbZ/inputs/mrtrix3_3.0.8-1_amd64.buildinfo /srv/rebuilderd/tmp/rebuilderdyDrFbZ/inputs/mrtrix3_3.0.8-1_amd64.buildinfo contains a GPG signature which has NOT been validated Using defined Build-Path: /build/reproducible-path/mrtrix3-3.0.8 I: verifying dsc... successful! Get:1 http://deb.debian.org/debian unstable InRelease [186 kB] Get:2 http://snapshot.debian.org/archive/debian/20251216T203730Z forky InRelease [137 kB] Get:3 http://deb.debian.org/debian unstable/main amd64 Packages [10.2 MB] Get:4 http://snapshot.debian.org/archive/debian/20251216T203730Z forky/main amd64 Packages [9673 kB] Fetched 20.2 MB in 3s (6161 kB/s) Reading package lists... W: http://snapshot.debian.org/archive/debian/20251216T203730Z/dists/forky/InRelease: Loading /etc/apt/trusted.gpg from deprecated option Dir::Etc::Trusted Get:1 http://deb.debian.org/debian unstable/main amd64 libstdc++6 amd64 15.2.0-11 [736 kB] Fetched 736 kB in 0s (30.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwg4fdr4g/libstdc++6_15.2.0-11_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 gfortran amd64 4:15.2.0-4 [1436 B] Fetched 1436 B in 0s (88.9 kB/s) dpkg-name: info: moved 'gfortran_4%3a15.2.0-4_amd64.deb' to '/srv/rebuilderd/tmp/tmpmdw6nqkn/gfortran_15.2.0-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libc-dev-bin amd64 2.42-6 [60.7 kB] Fetched 60.7 kB in 0s (3463 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpabxqz9op/libc-dev-bin_2.42-6_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libdeflate-dev amd64 1.23-2 [55.9 kB] Fetched 55.9 kB in 0s (3088 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpymjqqwcg/libdeflate-dev_1.23-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libsensors5 amd64 1:3.6.2-2 [37.5 kB] Fetched 37.5 kB in 0s (3154 kB/s) dpkg-name: info: moved 'libsensors5_1%3a3.6.2-2_amd64.deb' to '/srv/rebuilderd/tmp/tmp43u2h_3b/libsensors5_3.6.2-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxml-libxml-perl amd64 2.0207+dfsg+really+2.0134-7 [314 kB] Fetched 314 kB in 0s (18.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxdy69p03/libxml-libxml-perl_2.0207+dfsg+really+2.0134-7_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 comerr-dev amd64 2.1-1.47.2-3+b4 [56.7 kB] Fetched 56.7 kB in 0s (4353 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpq5u39lht/comerr-dev_2.1-1.47.2-3+b4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libb2-1 amd64 0.98.1-1.1+b2 [41.7 kB] Fetched 41.7 kB in 0s (2421 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9cwle9za/libb2-1_0.98.1-1.1+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libedit2 amd64 3.1-20250104-1 [93.8 kB] Fetched 93.8 kB in 0s (5758 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4pilbsij/libedit2_3.1-20250104-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxcb-present0 amd64 1.17.0-2+b1 [106 kB] Fetched 106 kB in 0s (5555 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpza74xebi/libxcb-present0_1.17.0-2+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 xkb-data all 2.46-1 [830 kB] Fetched 830 kB in 0s (44.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph5mcqdid/xkb-data_2.46-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 g++-x86-64-linux-gnu amd64 4:15.2.0-4 [1196 B] Fetched 1196 B in 0s (84.0 kB/s) dpkg-name: info: moved 'g++-x86-64-linux-gnu_4%3a15.2.0-4_amd64.deb' to '/srv/rebuilderd/tmp/tmp815jb16b/g++-x86-64-linux-gnu_15.2.0-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libqt6xml6 amd64 6.9.2+dfsg-3 [87.0 kB] Fetched 87.0 kB in 0s (7641 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1s7v6gp0/libqt6xml6_6.9.2+dfsg-3_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251216T203730Z forky/main amd64 mesa-libgallium amd64 25.2.8-2+b2 [10.3 MB] Fetched 10.3 MB in 0s (124 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpk_tsh9uy/mesa-libgallium_25.2.8-2+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libmp3lame0 amd64 3.100-6+b3 [363 kB] Fetched 363 kB in 0s (26.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3p164b9g/libmp3lame0_3.100-6+b3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 texinfo all 7.2-5 [1973 kB] Fetched 1973 kB in 0s (69.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyahacog2/texinfo_7.2-5_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 sed amd64 4.9-2 [329 kB] Fetched 329 kB in 0s (14.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptp56w3be/sed_4.9-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxcb-xkb1 amd64 1.17.0-2+b1 [130 kB] Fetched 130 kB in 0s (8498 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdpxscbfr/libxcb-xkb1_1.17.0-2+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libldap-dev amd64 2.6.10+dfsg-1 [312 kB] Fetched 312 kB in 0s (13.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1mvepa6y/libldap-dev_2.6.10+dfsg-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libhdf5-310 amd64 1.14.5+repack-4 [1448 kB] Fetched 1448 kB in 0s (57.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4es1xabj/libhdf5-310_1.14.5+repack-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3 amd64 3.13.9-2 [27.5 kB] Fetched 27.5 kB in 0s (1631 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpypg59c_r/python3_3.13.9-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 ncurses-base all 6.5+20251123-1 [277 kB] Fetched 277 kB in 0s (15.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp695gwdfz/ncurses-base_6.5+20251123-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-3 [58.3 kB] Fetched 58.3 kB in 0s (4947 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3j1850ag/librtmp1_2.4+20151223.gitfa8646d.1-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libglpk40 amd64 5.0-2 [398 kB] Fetched 398 kB in 0s (28.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps3geon_0/libglpk40_5.0-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-2 [68.5 kB] Fetched 68.5 kB in 0s (4343 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdey3trm3/libuchardet0_0.0.8-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxcb-xfixes0 amd64 1.17.0-2+b1 [109 kB] Fetched 109 kB in 0s (6489 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7jpf7ej3/libxcb-xfixes0_1.17.0-2+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.23.2-1 [245 kB] Fetched 245 kB in 0s (18.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbdy9v60u/gettext-base_0.23.2-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libdrm-amdgpu1 amd64 2.4.129-1 [24.2 kB] Fetched 24.2 kB in 0s (2204 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfkdxadvo/libdrm-amdgpu1_2.4.129-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libssh2-1t64 amd64 1.11.1-1 [245 kB] Fetched 245 kB in 0s (16.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptg0eiw1s/libssh2-1t64_1.11.1-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 bash amd64 5.3-1 [1556 kB] Fetched 1556 kB in 0s (50.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2wir4_06/bash_5.3-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libicu76 amd64 76.1-4 [9722 kB] Fetched 9722 kB in 0s (131 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbkq4gly6/libicu76_76.1-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libamd3 amd64 1:7.12.1+dfsg-1 [50.5 kB] Fetched 50.5 kB in 0s (3841 kB/s) dpkg-name: info: moved 'libamd3_1%3a7.12.1+dfsg-1_amd64.deb' to '/srv/rebuilderd/tmp/tmp6fhgjerq/libamd3_7.12.1+dfsg-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libde265-0 amd64 1.0.16-1+b1 [195 kB] Fetched 195 kB in 0s (12.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_eoyigsi/libde265-0_1.0.16-1+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libegl1 amd64 1.7.0-1+b2 [34.6 kB] Fetched 34.6 kB in 0s (2896 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpw1lr1ewu/libegl1_1.7.0-1+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpam-modules amd64 1.7.0-5 [179 kB] Fetched 179 kB in 0s (11.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph9gybowi/libpam-modules_1.7.0-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libtsan2 amd64 15.2.0-11 [2491 kB] Fetched 2491 kB in 0s (79.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpe46v8kh3/libtsan2_15.2.0-11_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxcb-cursor0 amd64 0.1.5-1 [17.1 kB] Fetched 17.1 kB in 0s (1398 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpand4pnnp/libxcb-cursor0_0.1.5-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libwebpdemux2 amd64 1.5.0-0.1 [113 kB] Fetched 113 kB in 0s (6728 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4qw8yg1t/libwebpdemux2_1.5.0-0.1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libcrypt-dev amd64 1:4.5.1-1 [128 kB] Fetched 128 kB in 0s (10.4 MB/s) dpkg-name: info: moved 'libcrypt-dev_1%3a4.5.1-1_amd64.deb' to '/srv/rebuilderd/tmp/tmpq382gun6/libcrypt-dev_4.5.1-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgudev-1.0-0 amd64 238-7 [14.6 kB] Fetched 14.6 kB in 0s (1028 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5mi24yb1/libgudev-1.0-0_238-7_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 tex-common all 6.20 [29.7 kB] Fetched 29.7 kB in 0s (1835 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzywcn47y/tex-common_6.20_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libduktape207 amd64 2.7.0-2+b2 [135 kB] Fetched 135 kB in 0s (10.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdlv3xoo9/libduktape207_2.7.0-2+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libfftw3-quad3 amd64 3.3.10-2+b1 [618 kB] Fetched 618 kB in 0s (34.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvmyglmnq/libfftw3-quad3_3.3.10-2+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 cpp-x86-64-linux-gnu amd64 4:15.2.0-4 [5292 B] Fetched 5292 B in 0s (485 kB/s) dpkg-name: info: moved 'cpp-x86-64-linux-gnu_4%3a15.2.0-4_amd64.deb' to '/srv/rebuilderd/tmp/tmpe1sl1t6w/cpp-x86-64-linux-gnu_15.2.0-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libjpeg62-turbo amd64 1:2.1.5-4 [168 kB] Fetched 168 kB in 0s (9284 kB/s) dpkg-name: info: moved 'libjpeg62-turbo_1%3a2.1.5-4_amd64.deb' to '/srv/rebuilderd/tmp/tmpggi6fq_r/libjpeg62-turbo_2.1.5-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libperl5.40 amd64 5.40.1-7 [4317 kB] Fetched 4317 kB in 0s (115 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjjw7nil8/libperl5.40_5.40.1-7_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libmd0 amd64 1.1.0-2+b1 [36.3 kB] Fetched 36.3 kB in 0s (2113 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt67y4gtm/libmd0_1.1.0-2+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 zlib1g amd64 1:1.3.dfsg+really1.3.1-1+b2 [89.0 kB] Fetched 89.0 kB in 0s (7676 kB/s) dpkg-name: info: moved 'zlib1g_1%3a1.3.dfsg+really1.3.1-1+b2_amd64.deb' to '/srv/rebuilderd/tmp/tmpq0y_48yk/zlib1g_1.3.dfsg+really1.3.1-1+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libcap2 amd64 1:2.75-10+b2 [28.7 kB] Fetched 28.7 kB in 0s (1888 kB/s) dpkg-name: info: moved 'libcap2_1%3a2.75-10+b2_amd64.deb' to '/srv/rebuilderd/tmp/tmprgx1bcvk/libcap2_2.75-10+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libfftw3-bin amd64 3.3.10-2+b1 [51.3 kB] Fetched 51.3 kB in 0s (4572 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsrw6fs53/libfftw3-bin_3.3.10-2+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgmp-dev amd64 2:6.3.0+dfsg-5 [658 kB] Fetched 658 kB in 0s (38.6 MB/s) dpkg-name: info: moved 'libgmp-dev_2%3a6.3.0+dfsg-5_amd64.deb' to '/srv/rebuilderd/tmp/tmppp_frf5k/libgmp-dev_6.3.0+dfsg-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libssl3t64 amd64 3.5.4-1 [2446 kB] Fetched 2446 kB in 0s (90.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1ka2d4hg/libssl3t64_3.5.4-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libheif-plugin-libde265 amd64 1.20.2-2+b4 [17.7 kB] Fetched 17.7 kB in 0s (1163 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp247_dlsr/libheif-plugin-libde265_1.20.2-2+b4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 fontconfig-config amd64 2.15.0-2.4 [318 kB] Fetched 318 kB in 0s (23.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpg8z5leo3/fontconfig-config_2.15.0-2.4_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251216T203730Z forky/main amd64 dpkg-dev all 1.22.21 [1338 kB] Fetched 1338 kB in 0s (68.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoc5c0on2/dpkg-dev_1.22.21_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpython3.13-stdlib amd64 3.13.11-1+b1 [1968 kB] Fetched 1968 kB in 0s (62.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplh4zuhtf/libpython3.13-stdlib_3.13.11-1+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 build-essential amd64 12.12 [4624 B] Fetched 4624 B in 0s (396 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2nxptei_/build-essential_12.12_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libheif-plugin-dav1d amd64 1.20.2-2+b4 [19.1 kB] Fetched 19.1 kB in 0s (1280 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpem714n2t/libheif-plugin-dav1d_1.20.2-2+b4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libubsan1 amd64 15.2.0-11 [1108 kB] Fetched 1108 kB in 0s (43.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplrs9nklb/libubsan1_15.2.0-11_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libncurses6 amd64 6.5+20251123-1 [107 kB] Fetched 107 kB in 0s (9195 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpah0qpzvk/libncurses6_6.5+20251123-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgraphite2-3 amd64 1.3.14-11 [76.7 kB] Fetched 76.7 kB in 0s (6830 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8q3rkb5o/libgraphite2-3_1.3.14-11_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libfftw3-dev amd64 3.3.10-2+b1 [2118 kB] Fetched 2118 kB in 0s (81.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp94hhfilg/libfftw3-dev_3.3.10-2+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 xz-utils amd64 5.8.1-2 [660 kB] Fetched 660 kB in 0s (33.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9uojavch/xz-utils_5.8.1-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 krb5-multidev amd64 1.22.1-2 [127 kB] Fetched 127 kB in 0s (10.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpny5_4ijs/krb5-multidev_1.22.1-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libsamplerate0 amd64 0.2.2-4+b2 [950 kB] Fetched 950 kB in 0s (37.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwhs50qlq/libsamplerate0_0.2.2-4+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxcb-render-util0 amd64 0.3.10-1 [18.4 kB] Fetched 18.4 kB in 0s (958 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcd4yyace/libxcb-render-util0_0.3.10-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libqt5xml5t64 amd64 5.15.17+dfsg-5 [127 kB] Fetched 127 kB in 0s (4525 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjg_f736g/libqt5xml5t64_5.15.17+dfsg-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxxf86vm1 amd64 1:1.1.4-2 [19.9 kB] Fetched 19.9 kB in 0s (1209 kB/s) dpkg-name: info: moved 'libxxf86vm1_1%3a1.1.4-2_amd64.deb' to '/srv/rebuilderd/tmp/tmp8mg0ugrs/libxxf86vm1_1.1.4-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 gcc-x86-64-linux-gnu amd64 4:15.2.0-4 [1436 B] Fetched 1436 B in 0s (83.3 kB/s) dpkg-name: info: moved 'gcc-x86-64-linux-gnu_4%3a15.2.0-4_amd64.deb' to '/srv/rebuilderd/tmp/tmphjo795sx/gcc-x86-64-linux-gnu_15.2.0-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libharfbuzz0b amd64 12.2.0-1 [529 kB] Fetched 529 kB in 0s (28.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6kjnb_pg/libharfbuzz0b_12.2.0-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libzstd-dev amd64 1.5.7+dfsg-2 [375 kB] Fetched 375 kB in 0s (18.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppz7kzv3j/libzstd-dev_1.5.7+dfsg-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libjpeg62-turbo-dev amd64 1:2.1.5-4 [292 kB] Fetched 292 kB in 0s (15.7 MB/s) dpkg-name: info: moved 'libjpeg62-turbo-dev_1%3a2.1.5-4_amd64.deb' to '/srv/rebuilderd/tmp/tmp9_cixce6/libjpeg62-turbo-dev_2.1.5-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libasound2t64 amd64 1.2.15-2 [396 kB] Fetched 396 kB in 0s (18.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpe0c43c50/libasound2t64_1.2.15-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libqt5network5t64 amd64 5.15.17+dfsg-5 [692 kB] Fetched 692 kB in 0s (18.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6sev6yjm/libqt5network5t64_5.15.17+dfsg-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libsensors-config all 1:3.6.2-2 [16.2 kB] Fetched 16.2 kB in 0s (967 kB/s) dpkg-name: info: moved 'libsensors-config_1%3a3.6.2-2_all.deb' to '/srv/rebuilderd/tmp/tmpbegrq34p/libsensors-config_3.6.2-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 gcc-15-x86-64-linux-gnu amd64 15.2.0-11 [23.4 MB] Fetched 23.4 MB in 0s (116 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnrcnno55/gcc-15-x86-64-linux-gnu_15.2.0-11_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxcursor1 amd64 1:1.2.3-1 [39.7 kB] Fetched 39.7 kB in 0s (2152 kB/s) dpkg-name: info: moved 'libxcursor1_1%3a1.2.3-1_amd64.deb' to '/srv/rebuilderd/tmp/tmpkroas3bf/libxcursor1_1.2.3-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libisl23 amd64 0.27-1 [659 kB] Fetched 659 kB in 0s (28.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpai2_qszk/libisl23_0.27-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.46-5 [109 kB] Fetched 109 kB in 0s (6348 kB/s) dpkg-name: info: moved 'libmagic1t64_1%3a5.46-5_amd64.deb' to '/srv/rebuilderd/tmp/tmp_rc87hzo/libmagic1t64_5.46-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libncurses-dev amd64 6.5+20251123-1 [356 kB] Fetched 356 kB in 0s (17.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp936o1f59/libncurses-dev_6.5+20251123-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libuuid1 amd64 2.41.3-1 [38.8 kB] Fetched 38.8 kB in 0s (2167 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0ui_rv0s/libuuid1_2.41.3-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpciaccess0 amd64 0.17-3+b3 [51.9 kB] Fetched 51.9 kB in 0s (3150 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc2_pjfih/libpciaccess0_0.17-3+b3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libtasn1-6-dev amd64 4.20.0-2 [99.2 kB] Fetched 99.2 kB in 0s (5730 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp41ee159g/libtasn1-6-dev_4.20.0-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libudev1 amd64 259~rc3-1 [158 kB] Fetched 158 kB in 0s (12.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo8becpk6/libudev1_259~rc3-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libogg0 amd64 1.3.6-2 [24.3 kB] Fetched 24.3 kB in 0s (1383 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpi_ww_rei/libogg0_1.3.6-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libspqr4 amd64 1:7.12.1+dfsg-1 [156 kB] Fetched 156 kB in 0s (9966 kB/s) dpkg-name: info: moved 'libspqr4_1%3a7.12.1+dfsg-1_amd64.deb' to '/srv/rebuilderd/tmp/tmpexj5s8sc/libspqr4_7.12.1+dfsg-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libwebp-dev amd64 1.5.0-0.1 [450 kB] Fetched 450 kB in 0s (22.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2snpgo74/libwebp-dev_1.5.0-0.1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libmtdev1t64 amd64 1.1.7-1 [22.6 kB] Fetched 22.6 kB in 0s (1308 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_hm9igyf/libmtdev1t64_1.1.7-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxcb-shm0 amd64 1.17.0-2+b1 [105 kB] Fetched 105 kB in 0s (5789 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqxjnt05w/libxcb-shm0_1.17.0-2+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libidn2-dev amd64 2.3.8-4 [103 kB] Fetched 103 kB in 0s (5279 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp77gtd8fb/libidn2-dev_2.3.8-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.46-5 [43.6 kB] Fetched 43.6 kB in 0s (2529 kB/s) dpkg-name: info: moved 'file_1%3a5.46-5_amd64.deb' to '/srv/rebuilderd/tmp/tmpxvb3n7rj/file_5.46-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libwebpmux3 amd64 1.5.0-0.1 [126 kB] Fetched 126 kB in 0s (6969 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxfg4xkpt/libwebpmux3_1.5.0-0.1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgcc-15-dev amd64 15.2.0-11 [2719 kB] Fetched 2719 kB in 0s (61.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5vl1e41i/libgcc-15-dev_15.2.0-11_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-mono all 2.37-8 [489 kB] Fetched 489 kB in 0s (18.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpe86gx4q8/fonts-dejavu-mono_2.37-8_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libhogweed6t64 amd64 3.10.2-1 [336 kB] Fetched 336 kB in 0s (17.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph7xlp1fq/libhogweed6t64_3.10.2-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 qtbase5-dev-tools amd64 5.15.17+dfsg-5 [778 kB] Fetched 778 kB in 0s (20.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9u_map1s/qtbase5-dev-tools_5.15.17+dfsg-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libfftw3-double3 amd64 3.3.10-2+b1 [781 kB] Fetched 781 kB in 0s (45.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpapw3xj5q/libfftw3-double3_3.3.10-2+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libinput-bin amd64 1.30.0-1 [27.9 kB] Fetched 27.9 kB in 0s (2382 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt8i2knxw/libinput-bin_1.30.0-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libvorbisenc2 amd64 1.3.7-3 [75.4 kB] Fetched 75.4 kB in 0s (5023 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfjfk66og/libvorbisenc2_1.3.7-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgnutls30t64 amd64 3.8.11-3 [1509 kB] Fetched 1509 kB in 0s (49.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4tes6b_z/libgnutls30t64_3.8.11-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgprofng0 amd64 2.45.50.20251209-1 [823 kB] Fetched 823 kB in 0s (47.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuj734w0_/libgprofng0_2.45.50.20251209-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxml-sax-base-perl all 1.09-3 [20.6 kB] Fetched 20.6 kB in 0s (1796 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpg76odo3a/libxml-sax-base-perl_1.09-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20240727.1 [60.2 kB] Fetched 60.2 kB in 0s (3932 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3g0hzcvg/autotools-dev_20240727.1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libqt6sql6 amd64 6.9.2+dfsg-3 [147 kB] Fetched 147 kB in 0s (11.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbyn30f8q/libqt6sql6_6.9.2+dfsg-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 liblsan0 amd64 15.2.0-11 [1249 kB] Fetched 1249 kB in 0s (43.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdsyr5qoh/liblsan0_15.2.0-11_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 perl-base amd64 5.40.1-7 [1679 kB] Fetched 1679 kB in 0s (71.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn1g7zmta/perl-base_5.40.1-7_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxcb-dri3-0 amd64 1.17.0-2+b1 [107 kB] Fetched 107 kB in 0s (8904 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpri7h57kl/libxcb-dri3-0_1.17.0-2+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 binutils amd64 2.45.50.20251209-1 [281 kB] Fetched 281 kB in 0s (16.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqwcbqwdf/binutils_2.45.50.20251209-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libhdf5-dev amd64 1.14.5+repack-4 [3327 kB] Fetched 3327 kB in 0s (68.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5k8qnbkx/libhdf5-dev_1.14.5+repack-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libsz2 amd64 1.1.4-2 [8108 B] Fetched 8108 B in 0s (688 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpflvbiraj/libsz2_1.1.4-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libmagickcore-7.q16-10 amd64 8:7.1.2.8+dfsg1-1 [1848 kB] Fetched 1848 kB in 0s (15.9 MB/s) dpkg-name: info: moved 'libmagickcore-7.q16-10_8%3a7.1.2.8+dfsg1-1_amd64.deb' to '/srv/rebuilderd/tmp/tmphv6f_pus/libmagickcore-7.q16-10_7.1.2.8+dfsg1-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libx11-xcb1 amd64 2:1.8.12-1 [247 kB] Fetched 247 kB in 0s (13.4 MB/s) dpkg-name: info: moved 'libx11-xcb1_2%3a1.8.12-1_amd64.deb' to '/srv/rebuilderd/tmp/tmpj3ev87wq/libx11-xcb1_1.8.12-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libngtcp2-crypto-ossl0 amd64 1.16.0-1 [27.5 kB] Fetched 27.5 kB in 0s (1751 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp43i5nrbz/libngtcp2-crypto-ossl0_1.16.0-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 nettle-dev amd64 3.10.2-1 [1322 kB] Fetched 1322 kB in 0s (58.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1u4dvsn_/nettle-dev_3.10.2-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libmd4c0 amd64 0.5.2-2+b1 [49.0 kB] Fetched 49.0 kB in 0s (4443 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2gm9fe07/libmd4c0_0.5.2-2+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libcap-ng0 amd64 0.8.5-4+b2 [17.5 kB] Fetched 17.5 kB in 0s (1573 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc4m0dcc1/libcap-ng0_0.8.5-4+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libkdb5-10t64 amd64 1.22.1-2 [43.4 kB] Fetched 43.4 kB in 0s (3689 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplk9pi7rl/libkdb5-10t64_1.22.1-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libmpc3 amd64 1.3.1-2 [55.8 kB] Fetched 55.8 kB in 0s (3742 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc4ctr3h1/libmpc3_1.3.1-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libjxl0.11 amd64 0.11.1-6 [1165 kB] Fetched 1165 kB in 0s (42.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6uun3j3f/libjxl0.11_0.11.1-6_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libproxy1v5 amd64 0.5.12-1 [26.8 kB] Fetched 26.8 kB in 0s (1568 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbobbzyhn/libproxy1v5_0.5.12-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 imagemagick-7-common all 8:7.1.2.8+dfsg1-1 [69.3 kB] Fetched 69.3 kB in 0s (2132 kB/s) dpkg-name: info: moved 'imagemagick-7-common_8%3a7.1.2.8+dfsg1-1_all.deb' to '/srv/rebuilderd/tmp/tmp7djk510o/imagemagick-7-common_7.1.2.8+dfsg1-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxcb-xinput0 amd64 1.17.0-2+b1 [130 kB] Fetched 130 kB in 0s (10.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpg5wwg7of/libxcb-xinput0_1.17.0-2+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libltdl7 amd64 2.5.4-9 [416 kB] Fetched 416 kB in 0s (31.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkonbadva/libltdl7_2.5.4-9_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxfixes3 amd64 1:6.0.0-2+b4 [20.2 kB] Fetched 20.2 kB in 0s (1638 kB/s) dpkg-name: info: moved 'libxfixes3_1%3a6.0.0-2+b4_amd64.deb' to '/srv/rebuilderd/tmp/tmplbgxszv6/libxfixes3_6.0.0-2+b4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 pkgconf-bin amd64 1.8.1-4 [30.2 kB] Fetched 30.2 kB in 0s (2728 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoaiztasc/pkgconf-bin_1.8.1-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Fetched 22.9 kB in 0s (2114 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzstk3a0c/intltool-debian_0.35.0+20060710.6_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 g++ amd64 4:15.2.0-4 [1344 B] Fetched 1344 B in 0s (132 kB/s) dpkg-name: info: moved 'g++_4%3a15.2.0-4_amd64.deb' to '/srv/rebuilderd/tmp/tmpem93mhcy/g++_15.2.0-4_amd64.deb' Downloading dependency 1 of 481: libstdc++6:amd64=15.2.0-11 Downloading dependency 2 of 481: 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libmagickcore-7.q16-10:amd64=8:7.1.2.8+dfsg1-1 Downloading dependency 112 of 481: libx11-xcb1:amd64=2:1.8.12-1 Downloading dependency 113 of 481: libngtcp2-crypto-ossl0:amd64=1.16.0-1 Downloading dependency 114 of 481: nettle-dev:amd64=3.10.2-1 Downloading dependency 115 of 481: libmd4c0:amd64=0.5.2-2+b1 Downloading dependency 116 of 481: libcap-ng0:amd64=0.8.5-4+b2 Downloading dependency 117 of 481: libkdb5-10t64:amd64=1.22.1-2 Downloading dependency 118 of 481: libmpc3:amd64=1.3.1-2 Downloading dependency 119 of 481: libjxl0.11:amd64=0.11.1-6 Downloading dependency 120 of 481: libproxy1v5:amd64=0.5.12-1 Downloading dependency 121 of 481: imagemagick-7-common:amd64=8:7.1.2.8+dfsg1-1 Downloading dependency 122 of 481: libxcb-xinput0:amd64=1.17.0-2+b1 Downloading dependency 123 of 481: libltdl7:amd64=2.5.4-9 Downloading dependency 124 of 481: libxfixes3:amd64=1:6.0.0-2+b4 Downloading dependency 125 of 481: pkgconf-bin:amd64=1.8.1-4 Downloading dependency 126 of 481: intltool-debian:amd64=0.35.0+20060710.6 Downloading dependency 127 of 481: g++:amd64=4:15.2.0-4 Downloading dependency 128 of 481: libctf0:amd64=2.45.50.20251209-1Get:1 http://deb.debian.org/debian unstable/main amd64 libctf0 amd64 2.45.50.20251209-1 [92.2 kB] Fetched 92.2 kB in 0s (5953 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpru90j_i9/libctf0_2.45.50.20251209-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libbsd0 amd64 0.12.2-2 [131 kB] Fetched 131 kB in 0s (12.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_t67br6o/libbsd0_0.12.2-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libdeflate0 amd64 1.23-2 [47.3 kB] Fetched 47.3 kB in 0s (3052 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp19k3ddj_/libdeflate0_1.23-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 perl amd64 5.40.1-7 [267 kB] Fetched 267 kB in 0s (20.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpna5z9nj3/perl_5.40.1-7_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libacl1 amd64 2.3.2-2+b1 [32.9 kB] Fetched 32.9 kB in 0s (2884 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxweml1w4/libacl1_2.3.2-2+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgmpxx4ldbl amd64 2:6.3.0+dfsg-5 [330 kB] Fetched 330 kB in 0s (18.4 MB/s) dpkg-name: info: moved 'libgmpxx4ldbl_2%3a6.3.0+dfsg-5_amd64.deb' to '/srv/rebuilderd/tmp/tmp04ieqgg4/libgmpxx4ldbl_6.3.0+dfsg-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libqt6opengl6 amd64 6.9.2+dfsg-3 [413 kB] Fetched 413 kB in 0s (21.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_6wj8k_v/libqt6opengl6_6.9.2+dfsg-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 binutils-x86-64-linux-gnu amd64 2.45.50.20251209-1 [1060 kB] Fetched 1060 kB in 0s (57.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpthh2tbj3/binutils-x86-64-linux-gnu_2.45.50.20251209-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.15.0-1 [8812 B] Fetched 8812 B in 0s (801 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjy342dl3/dh-strip-nondeterminism_1.15.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 sysvinit-utils amd64 3.15-6 [35.0 kB] Fetched 35.0 kB in 0s (2517 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmahp7t6b/sysvinit-utils_3.15-6_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpam0g amd64 1.7.0-5 [69.9 kB] Fetched 69.9 kB in 0s (5329 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7_5w2zls/libpam0g_1.7.0-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.22 [216 kB] Fetched 216 kB in 0s (12.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphytfmj49/po-debconf_1.0.22_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgdbm6t64 amd64 1.26-1 [78.5 kB] Fetched 78.5 kB in 0s (4894 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3dgtfk9m/libgdbm6t64_1.26-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 dh-python all 6.20251204.1 [114 kB] Fetched 114 kB in 0s (9464 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoorljjnc/dh-python_6.20251204.1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libqt6core5compat6 amd64 6.9.2-3 [139 kB] Fetched 139 kB in 0s (10.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpupewd8_m/libqt6core5compat6_6.9.2-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 make amd64 4.4.1-3 [463 kB] Fetched 463 kB in 0s (32.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfs4lyw8w/make_4.4.1-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Fetched 15.1 kB in 0s (1395 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5922ys_6/libxml-namespacesupport-perl_1.12-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libssh2-1-dev amd64 1.11.1-1 [393 kB] Fetched 393 kB in 0s (21.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp59iavye/libssh2-1-dev_1.11.1-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libunbound8 amd64 1.24.2-1 [615 kB] Fetched 615 kB in 0s (37.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1_ixjh98/libunbound8_1.24.2-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libunistring5 amd64 1.3-2 [477 kB] Fetched 477 kB in 0s (28.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuqwtfvfk/libunistring5_1.3-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libopengl0 amd64 1.7.0-1+b2 [30.9 kB] Fetched 30.9 kB in 0s (2918 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbrjwxh84/libopengl0_1.7.0-1+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libtext-unidecode-perl all 1.30-3 [101 kB] Fetched 101 kB in 0s (8531 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptflu___u/libtext-unidecode-perl_1.30-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 xtrans-dev all 1.6.0-1 [93.5 kB] Fetched 93.5 kB in 0s (5626 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcg6z_cy2/xtrans-dev_1.6.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 procps amd64 2:4.0.4-9 [882 kB] Fetched 882 kB in 0s (38.1 MB/s) dpkg-name: info: moved 'procps_2%3a4.0.4-9_amd64.deb' to '/srv/rebuilderd/tmp/tmpsy5wkdw1/procps_4.0.4-9_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libx11-dev amd64 2:1.8.12-1 [894 kB] Fetched 894 kB in 0s (48.7 MB/s) dpkg-name: info: moved 'libx11-dev_2%3a1.8.12-1_amd64.deb' to '/srv/rebuilderd/tmp/tmpd7b1hqnh/libx11-dev_1.8.12-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libidn2-0 amd64 2.3.8-4 [110 kB] Fetched 110 kB in 0s (9621 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn35d4a78/libidn2-0_2.3.8-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libqrupdate1 amd64 1.1.5-3 [39.9 kB] Fetched 39.9 kB in 0s (1559 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzog8h7wc/libqrupdate1_1.1.5-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-6 [9456 B] Fetched 9456 B in 0s (637 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptlxarg_k/libkeyutils1_1.6.3-6_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libqt6widgets6 amd64 6.9.2+dfsg-3 [2681 kB] Fetched 2681 kB in 0s (64.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8thvg_3y/libqt6widgets6_6.9.2+dfsg-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libqt5svg5 amd64 5.15.17-2 [138 kB] Fetched 138 kB in 0s (4649 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpncd7h_d2/libqt5svg5_5.15.17-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libmount1 amd64 2.41.3-1 [211 kB] Fetched 211 kB in 0s (12.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj9eilcb6/libmount1_2.41.3-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgl-dev amd64 1.7.0-1+b2 [101 kB] Fetched 101 kB in 0s (6134 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_e630v4f/libgl-dev_1.7.0-1+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libeigen3-dev all 3.4.0-5 [1034 kB] Fetched 1034 kB in 0s (17.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfsm5oxur/libeigen3-dev_3.4.0-5_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgsl28 amd64 2.8+dfsg-5.1 [1068 kB] Fetched 1068 kB in 0s (39.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4n4gruic/libgsl28_2.8+dfsg-5.1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libcurl4t64 amd64 8.18.0~rc2-1 [412 kB] Fetched 412 kB in 0s (23.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpngftfmwh/libcurl4t64_8.18.0~rc2-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libllvm19 amd64 1:19.1.7-19 [26.0 MB] Fetched 26.0 MB in 0s (83.7 MB/s) dpkg-name: info: moved 'libllvm19_1%3a19.1.7-19_amd64.deb' to '/srv/rebuilderd/tmp/tmp573zjaop/libllvm19_19.1.7-19_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libp11-kit-dev amd64 0.25.10-1 [221 kB] Fetched 221 kB in 0s (11.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqqe79c03/libp11-kit-dev_0.25.10-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libqt6gui6 amd64 6.9.2+dfsg-3 [3262 kB] Fetched 3262 kB in 0s (61.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpiyl6irn4/libqt6gui6_6.9.2+dfsg-3_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251216T203730Z forky/main amd64 libgbm1 amd64 25.2.8-2+b2 [46.4 kB] Fetched 46.4 kB in 0s (2917 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9xsnq8jt/libgbm1_25.2.8-2+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libqt5opengl5-dev amd64 5.15.17+dfsg-5 [52.5 kB] Fetched 52.5 kB in 0s (2021 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn_1nkspn/libqt5opengl5-dev_5.15.17+dfsg-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libarpack2t64 amd64 3.9.1-6 [104 kB] Fetched 104 kB in 0s (3065 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0q5sgd0u/libarpack2t64_3.9.1-6_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.46-5 [338 kB] Fetched 338 kB in 0s (17.0 MB/s) dpkg-name: info: moved 'libmagic-mgc_1%3a5.46-5_amd64.deb' to '/srv/rebuilderd/tmp/tmpohdl4446/libmagic-mgc_5.46-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpng16-16t64 amd64 1.6.53-1 [288 kB] Fetched 288 kB in 0s (15.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpi81sdfx3/libpng16-16t64_1.6.53-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libegl-dev amd64 1.7.0-1+b2 [19.5 kB] Fetched 19.5 kB in 0s (1102 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgn05ykdk/libegl-dev_1.7.0-1+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libk5crypto3 amd64 1.22.1-2 [81.1 kB] Fetched 81.1 kB in 0s (4789 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpboh141nc/libk5crypto3_1.22.1-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libavahi-common-data amd64 0.8-17 [112 kB] Fetched 112 kB in 0s (6709 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps0o6g45k/libavahi-common-data_0.8-17_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxft2 amd64 2.3.6-1+b4 [54.5 kB] Fetched 54.5 kB in 0s (3042 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9n72imfa/libxft2_2.3.6-1+b4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 librtmp-dev amd64 2.4+20151223.gitfa8646d.1-3 [67.9 kB] Fetched 67.9 kB in 0s (3980 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn0ph_ic7/librtmp-dev_2.4+20151223.gitfa8646d.1-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 octave amd64 10.3.0-3 [10.1 MB] Fetched 10.1 MB in 1s (18.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7kqpc7yo/octave_10.3.0-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxext6 amd64 2:1.3.4-1+b3 [50.4 kB] Fetched 50.4 kB in 0s (3117 kB/s) dpkg-name: info: moved 'libxext6_2%3a1.3.4-1+b3_amd64.deb' to '/srv/rebuilderd/tmp/tmp324ww_78/libxext6_1.3.4-1+b3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libfftw3-single3 amd64 3.3.10-2+b1 [809 kB] Fetched 809 kB in 0s (33.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd3oe1km6/libfftw3-single3_3.3.10-2+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libqhull-r8.0 amd64 2020.2-7 [248 kB] Fetched 248 kB in 0s (13.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfgqjjvh_/libqhull-r8.0_2020.2-7_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libdb5.3t64 amd64 5.3.28+dfsg2-11 [710 kB] Fetched 710 kB in 0s (36.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjijbjnj2/libdb5.3t64_5.3.28+dfsg2-11_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libopengl-dev amd64 1.7.0-1+b2 [5388 B] Fetched 5388 B in 0s (327 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz4d7dwac/libopengl-dev_1.7.0-1+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libqscintilla2-qt6-l10n all 2.14.1+dfsg-2 [105 kB] Fetched 105 kB in 0s (2574 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzcxwxclq/libqscintilla2-qt6-l10n_2.14.1+dfsg-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 gcc-15-base amd64 15.2.0-11 [53.9 kB] Fetched 53.9 kB in 0s (3278 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpor6cfwco/gcc-15-base_15.2.0-11_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libfltk-gl1.3t64 amd64 1.3.11-3 [65.3 kB] Fetched 65.3 kB in 0s (1770 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx78py812/libfltk-gl1.3t64_1.3.11-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libsmartcols1 amd64 2.41.3-1 [145 kB] Fetched 145 kB in 0s (8423 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpi_dkvdde/libsmartcols1_2.41.3-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libhwy1t64 amd64 1.3.0-2 [709 kB] Fetched 709 kB in 0s (37.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5kjwqip/libhwy1t64_1.3.0-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libjack-jackd2-0 amd64 1.9.22~dfsg-5 [288 kB] Fetched 288 kB in 0s (15.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9jmx475_/libjack-jackd2-0_1.9.22~dfsg-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libcups2t64 amd64 2.4.16-1 [254 kB] Fetched 254 kB in 0s (18.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpq3w_lbfq/libcups2t64_2.4.16-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxcb-glx0 amd64 1.17.0-2+b1 [122 kB] Fetched 122 kB in 0s (6962 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyfbz07ya/libxcb-glx0_1.17.0-2+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libintl-perl all 1.35-1 [690 kB] Fetched 690 kB in 0s (30.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0yu0zx_g/libintl-perl_1.35-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251216T203730Z forky/main amd64 libjansson4 amd64 2.14-2+b3 [39.8 kB] Fetched 39.8 kB in 0s (1975 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpefw89suj/libjansson4_2.14-2+b3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpam-modules-bin amd64 1.7.0-5 [49.1 kB] Fetched 49.1 kB in 0s (4302 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyu4kciqs/libpam-modules-bin_1.7.0-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libwacom-common all 2.16.1-1 [112 kB] Fetched 112 kB in 0s (8850 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptx0c_uxq/libwacom-common_2.16.1-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libinput10 amd64 1.30.0-1 [160 kB] Fetched 160 kB in 0s (8934 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2wk65wx2/libinput10_1.30.0-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 netbase all 6.5 [12.4 kB] Fetched 12.4 kB in 0s (797 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmfau3wzm/netbase_6.5_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libdouble-conversion3 amd64 3.4.0-1 [41.6 kB] Fetched 41.6 kB in 0s (2082 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprrxj1trp/libdouble-conversion3_3.4.0-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxau-dev amd64 1:1.0.11-1 [23.6 kB] Fetched 23.6 kB in 0s (2155 kB/s) dpkg-name: info: moved 'libxau-dev_1%3a1.0.11-1_amd64.deb' to '/srv/rebuilderd/tmp/tmpc548a920/libxau-dev_1.0.11-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libssl-dev amd64 3.5.4-1 [2980 kB] Fetched 2980 kB in 0s (94.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzy5qe6uk/libssl-dev_3.5.4-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxdmcp-dev amd64 1:1.1.5-1 [44.3 kB] Fetched 44.3 kB in 0s (2948 kB/s) dpkg-name: info: moved 'libxdmcp-dev_1%3a1.1.5-1_amd64.deb' to '/srv/rebuilderd/tmp/tmphfph1lnq/libxdmcp-dev_1.1.5-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 bzip2 amd64 1.0.8-6 [40.5 kB] Fetched 40.5 kB in 0s (3373 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoyna7v5_/bzip2_1.0.8-6_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxshmfence1 amd64 1.3.3-1 [10.9 kB] Fetched 10.9 kB in 0s (767 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_jcsagvp/libxshmfence1_1.3.3-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.15.0-1 [19.9 kB] Fetched 19.9 kB in 0s (1438 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy38ebu9t/libfile-stripnondeterminism-perl_1.15.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libsharpyuv-dev amd64 1.5.0-0.1 [120 kB] Fetched 120 kB in 0s (8333 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnm9gpqmn/libsharpyuv-dev_1.5.0-0.1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxrender1 amd64 1:0.9.12-1 [27.9 kB] Fetched 27.9 kB in 0s (2295 kB/s) dpkg-name: info: moved 'libxrender1_1%3a0.9.12-1_amd64.deb' to '/srv/rebuilderd/tmp/tmpowkydbu2/libxrender1_0.9.12-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libfftw3-long3 amd64 3.3.10-2+b1 [347 kB] Fetched 347 kB in 0s (27.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvr74syu4/libfftw3-long3_3.3.10-2+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 pkgconf amd64 1.8.1-4 [26.2 kB] Fetched 26.2 kB in 0s (2245 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcujgzaln/pkgconf_1.8.1-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libmagickwand-7.q16-10 amd64 8:7.1.2.8+dfsg1-1 [342 kB] Fetched 342 kB in 0s (4194 kB/s) dpkg-name: info: moved 'libmagickwand-7.q16-10_8%3a7.1.2.8+dfsg1-1_amd64.deb' to '/srv/rebuilderd/tmp/tmpyz2wrgky/libmagickwand-7.q16-10_7.1.2.8+dfsg1-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libhdf5-hl-fortran-310 amd64 1.14.5+repack-4 [47.9 kB] Fetched 47.9 kB in 0s (4508 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbwr6s8zl/libhdf5-hl-fortran-310_1.14.5+repack-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.23.2-1 [1687 kB] Fetched 1687 kB in 0s (79.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmposv06nne/gettext_0.23.2-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3.13-minimal amd64 3.13.11-1+b1 [2254 kB] Fetched 2254 kB in 0s (59.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsv_gr4kd/python3.13-minimal_3.13.11-1+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libsystemd0 amd64 259~rc3-1 [470 kB] Fetched 470 kB in 0s (34.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6yle691m/libsystemd0_259~rc3-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libcurl4-openssl-dev amd64 8.18.0~rc2-1 [534 kB] Fetched 534 kB in 0s (19.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpakj3iwj3/libcurl4-openssl-dev_8.18.0~rc2-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpcre2-16-0 amd64 10.46-1 [281 kB] Fetched 281 kB in 0s (23.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvkkmkgov/libpcre2-16-0_10.46-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libhdf5-hl-cpp-310 amd64 1.14.5+repack-4 [24.9 kB] Fetched 24.9 kB in 0s (2375 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9hni70wg/libhdf5-hl-cpp-310_1.14.5+repack-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libngtcp2-dev amd64 1.16.0-1 [193 kB] Fetched 193 kB in 0s (17.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmwnjci5m/libngtcp2-dev_1.16.0-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgsl-dev amd64 2.8+dfsg-5.1 [1336 kB] Fetched 1336 kB in 0s (16.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpezi1l58m/libgsl-dev_2.8+dfsg-5.1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgl2ps1.4 amd64 1.4.2+dfsg1-4 [43.2 kB] Fetched 43.2 kB in 0s (2165 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy2kcz_4q/libgl2ps1.4_1.4.2+dfsg1-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libtiff6 amd64 4.7.1-1 [361 kB] Fetched 361 kB in 0s (28.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjjvboqrq/libtiff6_4.7.1-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libavahi-client3 amd64 0.8-17 [52.1 kB] Fetched 52.1 kB in 0s (4569 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvuy4gfqx/libavahi-client3_0.8-17_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgraphicsmagick-q16-3t64 amd64 1.4+really1.3.46-2 [1267 kB] Fetched 1267 kB in 0s (10.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpf48x5z1f/libgraphicsmagick-q16-3t64_1.4+really1.3.46-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpkgconf3 amd64 1.8.1-4 [36.4 kB] Fetched 36.4 kB in 0s (3466 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj5a1qk1u/libpkgconf3_1.8.1-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libbrotli1 amd64 1.1.0-2+b9 [304 kB] Fetched 304 kB in 0s (24.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmjua5l1u/libbrotli1_1.1.0-2+b9_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libdrm-intel1 amd64 2.4.129-1 [65.6 kB] Fetched 65.6 kB in 0s (6108 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmerx6i4m/libdrm-intel1_2.4.129-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Fetched 104 kB in 0s (9377 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpeg2kr68r/libarchive-zip-perl_1.68-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 liblapack3 amd64 3.12.1-7 [2785 kB] Fetched 2785 kB in 0s (95.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpw6kjqtyy/liblapack3_3.12.1-7_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libumfpack6 amd64 1:7.12.1+dfsg-1 [298 kB] Fetched 298 kB in 0s (24.3 MB/s) dpkg-name: info: moved 'libumfpack6_1%3a7.12.1+dfsg-1_amd64.deb' to '/srv/rebuilderd/tmp/tmpgjsexdth/libumfpack6_7.12.1+dfsg-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-10 [19.8 kB] Fetched 19.8 kB in 0s (1736 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkw5w3uzj/libsasl2-modules-db_2.1.28+dfsg1-10_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libfltk1.3t64 amd64 1.3.11-3 [563 kB] Fetched 563 kB in 6s (97.1 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2tw8etn6/libfltk1.3t64_1.3.11-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libopus0 amd64 1.5.2-2 [2852 kB] Fetched 2852 kB in 0s (66.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3oes0856/libopus0_1.5.2-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-4 [53.4 kB] Fetched 53.4 kB in 0s (4823 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprm8oefj9/libxml-sax-perl_1.02+dfsg-4_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 liblcms2-2 amd64 2.17-1 [163 kB] Fetched 163 kB in 0s (9864 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5xd5gmf7/liblcms2-2_2.17-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libts0t64 amd64 1.22-1.1+b1 [61.7 kB] Fetched 61.7 kB in 0s (5084 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpupuoslb7/libts0t64_1.22-1.1+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libngtcp2-crypto-gnutls8 amd64 1.16.0-1 [25.2 kB] Fetched 25.2 kB in 0s (1638 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpll3s2jmi/libngtcp2-crypto-gnutls8_1.16.0-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libqt5svg5-dev amd64 5.15.17-2 [13.2 kB] Fetched 13.2 kB in 0s (515 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_09jf16s/libqt5svg5-dev_5.15.17-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-minimal amd64 3.13.9-2 [27.5 kB] Fetched 27.5 kB in 0s (2474 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb24bq02m/python3-minimal_3.13.9-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libctf-nobfd0 amd64 2.45.50.20251209-1 [160 kB] Fetched 160 kB in 0s (13.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_2gkagzx/libctf-nobfd0_2.45.50.20251209-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libsqlite3-0 amd64 3.46.1-8 [968 kB] Fetched 968 kB in 0s (39.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqddnrkxy/libsqlite3-0_3.46.1-8_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libnghttp2-dev amd64 1.64.0-1.1+b1 [117 kB] Fetched 117 kB in 0s (9368 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpk7njygjk/libnghttp2-dev_1.64.0-1.1+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libdrm2 amd64 2.4.129-1 [39.9 kB] Fetched 39.9 kB in 0s (3312 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr0kgpf4y/libdrm2_2.4.129-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libcxsparse4 amd64 1:7.12.1+dfsg-1 [95.5 kB] Fetched 95.5 kB in 0s (8449 kB/s) dpkg-name: info: moved 'libcxsparse4_1%3a7.12.1+dfsg-1_amd64.deb' to '/srv/rebuilderd/tmp/tmpyoys1kzu/libcxsparse4_7.12.1+dfsg-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libtasn1-6 amd64 4.20.0-2 [49.9 kB] Fetched 49.9 kB in 0s (4405 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplr2qz5or/libtasn1-6_4.20.0-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpython3.13-minimal amd64 3.13.11-1+b1 [866 kB] Fetched 866 kB in 0s (36.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8nn7uoe8/libpython3.13-minimal_3.13.11-1+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgraphicsmagick++-q16-12t64 amd64 1.4+really1.3.46-2 [128 kB] Fetched 128 kB in 0s (6721 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx6atpp2n/libgraphicsmagick++-q16-12t64_1.4+really1.3.46-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxau6 amd64 1:1.0.11-1 [20.4 kB] Fetched 20.4 kB in 0s (1477 kB/s) dpkg-name: info: moved 'libxau6_1%3a1.0.11-1_amd64.deb' to '/srv/rebuilderd/tmp/tmpqx3j7mzq/libxau6_1.0.11-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-core all 2.37-8 [840 kB] Fetched 840 kB in 0s (35.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpne8ocuhk/fonts-dejavu-core_2.37-8_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libcolamd3 amd64 1:7.12.1+dfsg-1 [42.3 kB] Fetched 42.3 kB in 0s (2603 kB/s) dpkg-name: info: moved 'libcolamd3_1%3a7.12.1+dfsg-1_amd64.deb' to '/srv/rebuilderd/tmp/tmp2eudpwyb/libcolamd3_7.12.1+dfsg-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libccolamd3 amd64 1:7.12.1+dfsg-1 [49.3 kB] Fetched 49.3 kB in 0s (3017 kB/s) dpkg-name: info: moved 'libccolamd3_1%3a7.12.1+dfsg-1_amd64.deb' to '/srv/rebuilderd/tmp/tmpjlo3rdlm/libccolamd3_7.12.1+dfsg-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgfortran5 amd64 15.2.0-11 [862 kB] Fetched 862 kB in 0s (35.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5df1vv0e/libgfortran5_15.2.0-11_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.16-2 [108 kB] Fetched 108 kB in 0s (6262 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpk3drah_6/dwz_0.16-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libhwasan0 amd64 15.2.0-11 [1538 kB] Fetched 1538 kB in 0s (48.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp25mm6hg5/libhwasan0_15.2.0-11_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libbinutils amd64 2.45.50.20251209-1 [538 kB] Fetched 538 kB in 0s (25.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvlvd1oby/libbinutils_2.45.50.20251209-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 liblzma5 amd64 5.8.1-2 [310 kB] Fetched 310 kB in 0s (17.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl4qrgi2n/liblzma5_5.8.1-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libglx0 amd64 1.7.0-1+b2 [34.9 kB] Fetched 34.9 kB in 0s (2170 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnt5yjxpj/libglx0_1.7.0-1+b2_amd64.deb' Downloading dependency 129 of 481: libbsd0:amd64=0.12.2-2 Downloading dependency 130 of 481: libdeflate0:amd64=1.23-2 Downloading dependency 131 of 481: perl:amd64=5.40.1-7 Downloading dependency 132 of 481: libacl1:amd64=2.3.2-2+b1 Downloading dependency 133 of 481: libgmpxx4ldbl:amd64=2:6.3.0+dfsg-5 Downloading dependency 134 of 481: libqt6opengl6:amd64=6.9.2+dfsg-3 Downloading dependency 135 of 481: binutils-x86-64-linux-gnu:amd64=2.45.50.20251209-1 Downloading dependency 136 of 481: dh-strip-nondeterminism:amd64=1.15.0-1 Downloading dependency 137 of 481: sysvinit-utils:amd64=3.15-6 Downloading dependency 138 of 481: libpam0g:amd64=1.7.0-5 Downloading dependency 139 of 481: po-debconf:amd64=1.0.22 Downloading dependency 140 of 481: libgdbm6t64:amd64=1.26-1 Downloading dependency 141 of 481: dh-python:amd64=6.20251204.1 Downloading dependency 142 of 481: libqt6core5compat6:amd64=6.9.2-3 Downloading dependency 143 of 481: make:amd64=4.4.1-3 Downloading dependency 144 of 481: libxml-namespacesupport-perl:amd64=1.12-2 Downloading dependency 145 of 481: libssh2-1-dev:amd64=1.11.1-1 Downloading dependency 146 of 481: libunbound8:amd64=1.24.2-1 Downloading dependency 147 of 481: libunistring5:amd64=1.3-2 Downloading dependency 148 of 481: 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libqhull-r8.0:amd64=2020.2-7 Downloading dependency 180 of 481: libdb5.3t64:amd64=5.3.28+dfsg2-11 Downloading dependency 181 of 481: libopengl-dev:amd64=1.7.0-1+b2 Downloading dependency 182 of 481: libqscintilla2-qt6-l10n:amd64=2.14.1+dfsg-2 Downloading dependency 183 of 481: gcc-15-base:amd64=15.2.0-11 Downloading dependency 184 of 481: libfltk-gl1.3t64:amd64=1.3.11-3 Downloading dependency 185 of 481: libsmartcols1:amd64=2.41.3-1 Downloading dependency 186 of 481: libhwy1t64:amd64=1.3.0-2 Downloading dependency 187 of 481: libjack-jackd2-0:amd64=1.9.22~dfsg-5 Downloading dependency 188 of 481: libcups2t64:amd64=2.4.16-1 Downloading dependency 189 of 481: libxcb-glx0:amd64=1.17.0-2+b1 Downloading dependency 190 of 481: libintl-perl:amd64=1.35-1 Downloading dependency 191 of 481: libjansson4:amd64=2.14-2+b3 Downloading dependency 192 of 481: libpam-modules-bin:amd64=1.7.0-5 Downloading dependency 193 of 481: libwacom-common:amd64=2.16.1-1 Downloading dependency 194 of 481: libinput10:amd64=1.30.0-1 Downloading dependency 195 of 481: netbase:amd64=6.5 Downloading dependency 196 of 481: libdouble-conversion3:amd64=3.4.0-1 Downloading dependency 197 of 481: libxau-dev:amd64=1:1.0.11-1 Downloading dependency 198 of 481: libssl-dev:amd64=3.5.4-1 Downloading dependency 199 of 481: libxdmcp-dev:amd64=1:1.1.5-1 Downloading dependency 200 of 481: bzip2:amd64=1.0.8-6 Downloading dependency 201 of 481: libxshmfence1:amd64=1.3.3-1 Downloading dependency 202 of 481: libfile-stripnondeterminism-perl:amd64=1.15.0-1 Downloading dependency 203 of 481: libsharpyuv-dev:amd64=1.5.0-0.1 Downloading dependency 204 of 481: libxrender1:amd64=1:0.9.12-1 Downloading dependency 205 of 481: libfftw3-long3:amd64=3.3.10-2+b1 Downloading dependency 206 of 481: pkgconf:amd64=1.8.1-4 Downloading dependency 207 of 481: libmagickwand-7.q16-10:amd64=8:7.1.2.8+dfsg1-1 Downloading dependency 208 of 481: libhdf5-hl-fortran-310:amd64=1.14.5+repack-4 Downloading dependency 209 of 481: gettext:amd64=0.23.2-1 Downloading dependency 210 of 481: python3.13-minimal:amd64=3.13.11-1+b1 Downloading dependency 211 of 481: libsystemd0:amd64=259~rc3-1 Downloading dependency 212 of 481: libcurl4-openssl-dev:amd64=8.18.0~rc2-1 Downloading dependency 213 of 481: libpcre2-16-0:amd64=10.46-1 Downloading dependency 214 of 481: libhdf5-hl-cpp-310:amd64=1.14.5+repack-4 Downloading dependency 215 of 481: libngtcp2-dev:amd64=1.16.0-1 Downloading dependency 216 of 481: libgsl-dev:amd64=2.8+dfsg-5.1 Downloading dependency 217 of 481: libgl2ps1.4:amd64=1.4.2+dfsg1-4 Downloading dependency 218 of 481: libtiff6:amd64=4.7.1-1 Downloading dependency 219 of 481: libavahi-client3:amd64=0.8-17 Downloading dependency 220 of 481: libgraphicsmagick-q16-3t64:amd64=1.4+really1.3.46-2 Downloading dependency 221 of 481: libpkgconf3:amd64=1.8.1-4 Downloading dependency 222 of 481: libbrotli1:amd64=1.1.0-2+b9 Downloading dependency 223 of 481: libdrm-intel1:amd64=2.4.129-1 Downloading dependency 224 of 481: libarchive-zip-perl:amd64=1.68-1 Downloading dependency 225 of 481: liblapack3:amd64=3.12.1-7 Downloading dependency 226 of 481: libumfpack6:amd64=1:7.12.1+dfsg-1 Downloading dependency 227 of 481: libsasl2-modules-db:amd64=2.1.28+dfsg1-10 Downloading dependency 228 of 481: libfltk1.3t64:amd64=1.3.11-3 Downloading dependency 229 of 481: libopus0:amd64=1.5.2-2 Downloading dependency 230 of 481: libxml-sax-perl:amd64=1.02+dfsg-4 Downloading dependency 231 of 481: liblcms2-2:amd64=2.17-1 Downloading dependency 232 of 481: libts0t64:amd64=1.22-1.1+b1 Downloading dependency 233 of 481: libngtcp2-crypto-gnutls8:amd64=1.16.0-1 Downloading dependency 234 of 481: libqt5svg5-dev:amd64=5.15.17-2 Downloading dependency 235 of 481: python3-minimal:amd64=3.13.9-2 Downloading dependency 236 of 481: libctf-nobfd0:amd64=2.45.50.20251209-1 Downloading dependency 237 of 481: libsqlite3-0:amd64=3.46.1-8 Downloading dependency 238 of 481: libnghttp2-dev:amd64=1.64.0-1.1+b1 Downloading dependency 239 of 481: libdrm2:amd64=2.4.129-1 Downloading dependency 240 of 481: libcxsparse4:amd64=1:7.12.1+dfsg-1 Downloading dependency 241 of 481: libtasn1-6:amd64=4.20.0-2 Downloading dependency 242 of 481: libpython3.13-minimal:amd64=3.13.11-1+b1 Downloading dependency 243 of 481: libgraphicsmagick++-q16-12t64:amd64=1.4+really1.3.46-2 Downloading dependency 244 of 481: libxau6:amd64=1:1.0.11-1 Downloading dependency 245 of 481: fonts-dejavu-core:amd64=2.37-8 Downloading dependency 246 of 481: libcolamd3:amd64=1:7.12.1+dfsg-1 Downloading dependency 247 of 481: libccolamd3:amd64=1:7.12.1+dfsg-1 Downloading dependency 248 of 481: libgfortran5:amd64=15.2.0-11 Downloading dependency 249 of 481: dwz:amd64=0.16-2 Downloading dependency 250 of 481: libhwasan0:amd64=15.2.0-11 Downloading dependency 251 of 481: libbinutils:amd64=2.45.50.20251209-1 Downloading dependency 252 of 481: liblzma5:amd64=5.8.1-2 Downloading dependency 253 of 481: libglx0:amd64=1.7.0-1+b2 Downloading dependency 254 of 481: libngtcp2-crypto-ossl-dev:amd64=1.16.0-1Get:1 http://deb.debian.org/debian unstable/main amd64 libngtcp2-crypto-ossl-dev amd64 1.16.0-1 [28.4 kB] Fetched 28.4 kB in 0s (1865 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx3fk0uwx/libngtcp2-crypto-ossl-dev_1.16.0-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libreadline8t64 amd64 8.3-3 [191 kB] Fetched 191 kB in 0s (11.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpe3pfn8ef/libreadline8t64_8.3-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libcamd3 amd64 1:7.12.1+dfsg-1 [47.3 kB] Fetched 47.3 kB in 0s (3101 kB/s) dpkg-name: info: moved 'libcamd3_1%3a7.12.1+dfsg-1_amd64.deb' to '/srv/rebuilderd/tmp/tmpgflmz59i/libcamd3_7.12.1+dfsg-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libkadm5clnt-mit12 amd64 1.22.1-2 [42.5 kB] Fetched 42.5 kB in 0s (3749 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpouuxvnmt/libkadm5clnt-mit12_1.22.1-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 qtchooser amd64 66-2 [26.3 kB] Fetched 26.3 kB in 0s (1675 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy8o7z4m0/qtchooser_66-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libdbus-1-3 amd64 1.16.2-2 [178 kB] Fetched 178 kB in 0s (10.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsn6f6jnr/libdbus-1-3_1.16.2-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgnutls-dane0t64 amd64 3.8.11-3 [469 kB] Fetched 469 kB in 0s (21.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzafecxf3/libgnutls-dane0t64_3.8.11-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libhdf5-hl-310 amd64 1.14.5+repack-4 [72.6 kB] Fetched 72.6 kB in 0s (4404 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_okrexdl/libhdf5-hl-310_1.14.5+repack-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libncursesw6 amd64 6.5+20251123-1 [136 kB] Fetched 136 kB in 0s (7694 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplu1c421s/libncursesw6_6.5+20251123-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.26 [27.0 kB] Fetched 27.0 kB in 0s (1730 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5m_i2h87/sensible-utils_0.0.26_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 hicolor-icon-theme all 0.18-2 [11.8 kB] Fetched 11.8 kB in 0s (793 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3s5p2ndv/hicolor-icon-theme_0.18-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 patch amd64 2.8-2 [134 kB] Fetched 134 kB in 0s (7172 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphqz7qr3z/patch_2.8-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 mawk amd64 1.3.4.20250131-1 [141 kB] Fetched 141 kB in 0s (7967 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0atqdoch/mawk_1.3.4.20250131-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 perl-modules-5.40 all 5.40.1-7 [3012 kB] Fetched 3012 kB in 0s (63.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp46ey9vl_/perl-modules-5.40_5.40.1-7_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-10 [1194 kB] Fetched 1194 kB in 0s (49.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpynwqtcrp/groff-base_1.23.0-10_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libseccomp2 amd64 2.6.0-2+b1 [52.2 kB] Fetched 52.2 kB in 0s (4328 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkbuqlcqo/libseccomp2_2.6.0-2+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libsm6 amd64 2:1.2.6-1 [37.3 kB] Fetched 37.3 kB in 0s (2223 kB/s) dpkg-name: info: moved 'libsm6_2%3a1.2.6-1_amd64.deb' to '/srv/rebuilderd/tmp/tmpnlhqycd9/libsm6_1.2.6-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libbrotli-dev amd64 1.1.0-2+b9 [316 kB] Fetched 316 kB in 0s (15.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkf47ohd6/libbrotli-dev_1.1.0-2+b9_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libqt6help6 amd64 6.9.2-3 [187 kB] Fetched 187 kB in 0s (13.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplasinrvj/libqt6help6_6.9.2-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgfortran-15-dev amd64 15.2.0-11 [886 kB] Fetched 886 kB in 0s (35.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkpwal8ks/libgfortran-15-dev_15.2.0-11_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgmp10 amd64 2:6.3.0+dfsg-5 [574 kB] Fetched 574 kB in 0s (26.3 MB/s) dpkg-name: info: moved 'libgmp10_2%3a6.3.0+dfsg-5_amd64.deb' to '/srv/rebuilderd/tmp/tmpdvhmav3f/libgmp10_6.3.0+dfsg-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libasan8 amd64 15.2.0-11 [2780 kB] Fetched 2780 kB in 0s (64.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsexio6o0/libasan8_15.2.0-11_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libdrm-common all 2.4.129-1 [9128 B] Fetched 9128 B in 0s (574 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1_l0qswj/libdrm-common_2.4.129-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libopenjp2-7 amd64 2.5.3-2.1 [204 kB] Fetched 204 kB in 0s (11.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph5gcf1l7/libopenjp2-7_2.5.3-2.1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 ncurses-bin amd64 6.5+20251123-1 [445 kB] Fetched 445 kB in 0s (22.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5profmas/ncurses-bin_6.5+20251123-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libtext-charwidth-perl amd64 0.04-11+b4 [9476 B] Fetched 9476 B in 0s (586 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuxg1ftfd/libtext-charwidth-perl_0.04-11+b4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB] Fetched 22.1 kB in 0s (1364 kB/s) dpkg-name: info: moved 'xorg-sgml-doctools_1%3a1.11-1.1_all.deb' to '/srv/rebuilderd/tmp/tmpodubonl3/xorg-sgml-doctools_1.11-1.1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libcholmod5 amd64 1:7.12.1+dfsg-1 [678 kB] Fetched 678 kB in 0s (30.3 MB/s) dpkg-name: info: moved 'libcholmod5_1%3a7.12.1+dfsg-1_amd64.deb' to '/srv/rebuilderd/tmp/tmptvli0bol/libcholmod5_7.12.1+dfsg-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 util-linux amd64 2.41.3-1 [1166 kB] Fetched 1166 kB in 0s (57.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpg2xb8mzx/util-linux_2.41.3-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxml2-16 amd64 2.15.1+dfsg-2+b1 [641 kB] Fetched 641 kB in 0s (28.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfmqpx0yw/libxml2-16_2.15.1+dfsg-2+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 liblqr-1-0 amd64 0.4.2-2.1+b2 [29.5 kB] Fetched 29.5 kB in 0s (1786 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpg752smzz/liblqr-1-0_0.4.2-2.1+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 texinfo-lib amd64 7.2-5 [812 kB] Fetched 812 kB in 0s (32.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy3xxymc0/texinfo-lib_7.2-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libtiffxx6 amd64 4.7.1-1 [174 kB] Fetched 174 kB in 0s (7328 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwqp7xmfq/libtiffxx6_4.7.1-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 cpp-15-x86-64-linux-gnu amd64 15.2.0-11 [12.1 MB] Fetched 12.1 MB in 0s (128 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptedjg6bq/cpp-15-x86-64-linux-gnu_15.2.0-11_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libportaudio2 amd64 19.7.0-1 [64.8 kB] Fetched 64.8 kB in 0s (2070 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpiu6e19ei/libportaudio2_19.7.0-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libaec-dev amd64 1.1.4-2 [21.5 kB] Fetched 21.5 kB in 0s (1548 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_bwqut3y/libaec-dev_1.1.4-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libz3-4 amd64 4.13.3-1 [8560 kB] Fetched 8560 kB in 0s (83.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp93w55f9k/libz3-4_4.13.3-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libvulkan1 amd64 1.4.328.1-1 [140 kB] Fetched 140 kB in 0s (7980 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp681ydpyd/libvulkan1_1.4.328.1-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libbz2-1.0 amd64 1.0.8-6 [37.9 kB] Fetched 37.9 kB in 0s (2233 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1ymbq1mo/libbz2-1.0_1.0.8-6_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libngtcp2-16 amd64 1.16.0-1 [136 kB] Fetched 136 kB in 0s (8099 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpw_efinje/libngtcp2-16_1.16.0-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libmpfr6 amd64 4.2.2-2 [742 kB] Fetched 742 kB in 0s (46.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx2urhbsl/libmpfr6_4.2.2-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 rpcsvc-proto amd64 1.4.3-1 [63.3 kB] Fetched 63.3 kB in 0s (4004 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpi65dd8j1/rpcsvc-proto_1.4.3-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxcb1-dev amd64 1.17.0-2+b1 [181 kB] Fetched 181 kB in 0s (10.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgaviz9ej/libxcb1-dev_1.17.0-2+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libsuitesparseconfig7 amd64 1:7.12.1+dfsg-1 [33.5 kB] Fetched 33.5 kB in 0s (2116 kB/s) dpkg-name: info: moved 'libsuitesparseconfig7_1%3a7.12.1+dfsg-1_amd64.deb' to '/srv/rebuilderd/tmp/tmplnokgayt/libsuitesparseconfig7_7.12.1+dfsg-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 matlab-support-dev all 0.3 [5444 B] Fetched 5444 B in 0s (30.8 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6kwg_jz6/matlab-support-dev_0.3_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libtext-wrapi18n-perl all 0.06-10 [8808 B] Fetched 8808 B in 0s (532 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt524p6zp/libtext-wrapi18n-perl_0.06-10_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251216T203730Z forky/main amd64 dpkg amd64 1.22.21 [1538 kB] Fetched 1538 kB in 0s (50.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn9d0hg3n/dpkg_1.22.21_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.194-1 [185 kB] Fetched 185 kB in 0s (10.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpumtw3io8/libelf1t64_0.194-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 fontconfig amd64 2.15.0-2.4 [464 kB] Fetched 464 kB in 0s (21.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc08ky2k2/fontconfig_2.15.0-2.4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 imagemagick-7.q16 amd64 8:7.1.2.8+dfsg1-1 [728 kB] Fetched 728 kB in 0s (10.0 MB/s) dpkg-name: info: moved 'imagemagick-7.q16_8%3a7.1.2.8+dfsg1-1_amd64.deb' to '/srv/rebuilderd/tmp/tmpx0m02bsx/imagemagick-7.q16_7.1.2.8+dfsg1-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libqt6network6 amd64 6.9.2+dfsg-3 [802 kB] Fetched 802 kB in 0s (40.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwd3tpkuf/libqt6network6_6.9.2+dfsg-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libhdf5-fortran-310 amd64 1.14.5+repack-4 [122 kB] Fetched 122 kB in 0s (10.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpe8gr6ikv/libhdf5-fortran-310_1.14.5+repack-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 x11proto-dev all 2024.1-1 [603 kB] Fetched 603 kB in 0s (29.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9x8vkmbc/x11proto-dev_2024.1-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libzstd1 amd64 1.5.7+dfsg-2 [308 kB] Fetched 308 kB in 0s (17.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp098csyyd/libzstd1_1.5.7+dfsg-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libsndfile1 amd64 1.2.2-3 [222 kB] Fetched 222 kB in 0s (17.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgvry1pqa/libsndfile1_1.2.2-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libkrb5-3 amd64 1.22.1-2 [337 kB] Fetched 337 kB in 0s (23.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8s2syvff/libkrb5-3_1.22.1-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libqt5sql5t64 amd64 5.15.17+dfsg-5 [127 kB] Fetched 127 kB in 0s (4738 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3ryeclva/libqt5sql5t64_5.15.17+dfsg-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libx11-data all 2:1.8.12-1 [343 kB] Fetched 343 kB in 0s (18.7 MB/s) dpkg-name: info: moved 'libx11-data_2%3a1.8.12-1_all.deb' to '/srv/rebuilderd/tmp/tmpfya9z_a9/libx11-data_1.8.12-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libselinux1 amd64 3.9-4+b1 [86.1 kB] Fetched 86.1 kB in 0s (5300 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxftzffdm/libselinux1_3.9-4+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 findutils amd64 4.10.0-3 [700 kB] Fetched 700 kB in 0s (31.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp98t_k8r6/findutils_4.10.0-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 qt5-qmake amd64 5.15.17+dfsg-5 [225 kB] Fetched 225 kB in 0s (8035 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjsr8qtpa/qt5-qmake_5.15.17+dfsg-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libwebpdecoder3 amd64 1.5.0-0.1 [208 kB] Fetched 208 kB in 0s (11.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpye9uzacm/libwebpdecoder3_1.5.0-0.1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libqt5opengl5t64 amd64 5.15.17+dfsg-5 [153 kB] Fetched 153 kB in 0s (5413 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6wrrqf4i/libqt5opengl5t64_5.15.17+dfsg-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxinerama1 amd64 2:1.1.4-3+b4 [16.0 kB] Fetched 16.0 kB in 0s (965 kB/s) dpkg-name: info: moved 'libxinerama1_2%3a1.1.4-3+b4_amd64.deb' to '/srv/rebuilderd/tmp/tmp17ig3xg3/libxinerama1_1.1.4-3+b4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpython3-stdlib amd64 3.13.9-2 [10.5 kB] Fetched 10.5 kB in 0s (595 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuypwgm2m/libpython3-stdlib_3.13.9-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libnghttp3-dev amd64 1.12.0-1 [95.5 kB] Fetched 95.5 kB in 0s (8829 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbwml2d21/libnghttp3-dev_1.12.0-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libqt5dbus5t64 amd64 5.15.17+dfsg-5 [219 kB] Fetched 219 kB in 0s (7432 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps3mwprih/libqt5dbus5t64_5.15.17+dfsg-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libqscintilla2-qt6-15 amd64 2.14.1+dfsg-2 [1185 kB] Fetched 1185 kB in 0s (14.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb3iniq66/libqscintilla2-qt6-15_2.14.1+dfsg-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 hdf5-helpers amd64 1.14.5+repack-4 [26.7 kB] Fetched 26.7 kB in 0s (1640 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb548ojta/hdf5-helpers_1.14.5+repack-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 gfortran-15 amd64 15.2.0-11 [18.3 kB] Fetched 18.3 kB in 0s (1081 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpem5h53ry/gfortran-15_15.2.0-11_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxcb-xinerama0 amd64 1.17.0-2+b1 [105 kB] Fetched 105 kB in 0s (6324 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7e6ke2qy/libxcb-xinerama0_1.17.0-2+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libevdev2 amd64 1.13.6+dfsg-1 [32.8 kB] Fetched 32.8 kB in 0s (2059 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmymv0oq3/libevdev2_1.13.6+dfsg-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libtool all 2.5.4-9 [540 kB] Fetched 540 kB in 0s (25.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp53ax90nr/libtool_2.5.4-9_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libwmflite-0.2-7 amd64 0.2.13-2 [75.3 kB] Fetched 75.3 kB in 0s (4614 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqgh69_gt/libwmflite-0.2-7_0.2.13-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpcre2-8-0 amd64 10.46-1 [298 kB] Fetched 298 kB in 0s (16.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyalpb9m6/libpcre2-8-0_10.46-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgslcblas0 amd64 2.8+dfsg-5.1 [137 kB] Fetched 137 kB in 0s (10.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzhbjoj57/libgslcblas0_2.8+dfsg-5.1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libcc1-0 amd64 15.2.0-11 [42.7 kB] Fetched 42.7 kB in 0s (2572 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5apimxn_/libcc1-0_15.2.0-11_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgdbm-compat4t64 amd64 1.26-1 [52.8 kB] Fetched 52.8 kB in 0s (3526 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp63t_88ru/libgdbm-compat4t64_1.26-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxcb1 amd64 1.17.0-2+b1 [144 kB] Fetched 144 kB in 0s (8048 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwlwd22t8/libxcb1_1.17.0-2+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libglib2.0-0t64 amd64 2.86.3-1 [1547 kB] Fetched 1547 kB in 0s (71.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8nsqsr94/libglib2.0-0t64_2.86.3-1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251216T203730Z forky/main amd64 libdpkg-perl all 1.22.21 [650 kB] Fetched 650 kB in 0s (27.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn93zfbl7/libdpkg-perl_1.22.21_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 tar amd64 1.35+dfsg-3.1 [815 kB] Fetched 815 kB in 0s (33.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1b70uola/tar_1.35+dfsg-3.1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libc6-dev amd64 2.42-6 [2090 kB] Fetched 2090 kB in 0s (63.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptt0adv2j/libc6-dev_2.42-6_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libnghttp2-14 amd64 1.64.0-1.1+b1 [76.2 kB] Fetched 76.2 kB in 0s (4380 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4c2ed3f5/libnghttp2-14_1.64.0-1.1+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libflac14 amd64 1.5.0+ds-5 [180 kB] Fetched 180 kB in 0s (9232 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx0wxqr9w/libflac14_1.5.0+ds-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libp11-kit0 amd64 0.25.10-1 [444 kB] Fetched 444 kB in 0s (29.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc0k41jw_/libp11-kit0_0.25.10-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 media-types all 14.0.0 [30.8 kB] Fetched 30.8 kB in 0s (2560 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpaophs3r0/media-types_14.0.0_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 gfortran-x86-64-linux-gnu amd64 4:15.2.0-4 [1276 B] Fetched 1276 B in 0s (107 kB/s) dpkg-name: info: moved 'gfortran-x86-64-linux-gnu_4%3a15.2.0-4_amd64.deb' to '/srv/rebuilderd/tmp/tmp3rpqi94j/gfortran-x86-64-linux-gnu_15.2.0-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 liblzma-dev amd64 5.8.1-2 [349 kB] Fetched 349 kB in 0s (25.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7y537b5l/liblzma-dev_5.8.1-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 gcc-15 amd64 15.2.0-11 [530 kB] Fetched 530 kB in 0s (24.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp46y7ifp5/gcc-15_15.2.0-11_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxkbcommon0 amd64 1.12.3-1 [146 kB] Fetched 146 kB in 0s (10.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsm8fu54r/libxkbcommon0_1.12.3-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 octave-common all 10.3.0-3 [6653 kB] Fetched 6653 kB in 0s (29.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjb_wirna/octave-common_10.3.0-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libevent-2.1-7t64 amd64 2.1.12-stable-10+b1 [182 kB] Fetched 182 kB in 0s (14.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkbj7sllm/libevent-2.1-7t64_2.1.12-stable-10+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libldap2 amd64 2.6.10+dfsg-1 [194 kB] Fetched 194 kB in 0s (14.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps4d_0yzc/libldap2_2.6.10+dfsg-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libwayland-client0 amd64 1.24.0-2+b1 [28.5 kB] Fetched 28.5 kB in 0s (2310 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpa_rayyve/libwayland-client0_1.24.0-2+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libcrypt1 amd64 1:4.5.1-1 [98.0 kB] Fetched 98.0 kB in 0s (5462 kB/s) dpkg-name: info: moved 'libcrypt1_1%3a4.5.1-1_amd64.deb' to '/srv/rebuilderd/tmp/tmppse4gesc/libcrypt1_4.5.1-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 dash amd64 0.5.12-12 [98.5 kB] Fetched 98.5 kB in 0s (5500 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkmvjo60a/dash_0.5.12-12_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.41.3-1 [98.9 kB] Fetched 98.9 kB in 0s (5772 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd9hrumfd/bsdextrautils_2.41.3-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libblkid1 amd64 2.41.3-1 [174 kB] Fetched 174 kB in 0s (11.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxdojgiuo/libblkid1_2.41.3-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgssrpc4t64 amd64 1.22.1-2 [60.3 kB] Fetched 60.3 kB in 0s (4710 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz6opka2a/libgssrpc4t64_1.22.1-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpsl5t64 amd64 0.21.2-1.1+b1 [57.2 kB] Fetched 57.2 kB in 0s (3458 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmb5jil76/libpsl5t64_0.21.2-1.1+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libreadline-dev amd64 8.3-3 [175 kB] Fetched 175 kB in 0s (9385 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb1xijh7c/libreadline-dev_8.3-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 readline-common all 8.3-3 [74.8 kB] Fetched 74.8 kB in 0s (4443 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfoy8c6m0/readline-common_8.3-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 cpp-15 amd64 15.2.0-11 [1276 B] Fetched 1276 B in 0s (75.5 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyylrxe0_/cpp-15_15.2.0-11_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libsframe2 amd64 2.45.50.20251209-1 [80.3 kB] Fetched 80.3 kB in 0s (4582 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv1r3ccom/libsframe2_2.45.50.20251209-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 diffutils amd64 1:3.12-1 [405 kB] Fetched 405 kB in 0s (19.2 MB/s) dpkg-name: info: moved 'diffutils_1%3a3.12-1_amd64.deb' to '/srv/rebuilderd/tmp/tmp106qsceq/diffutils_3.12-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 gcc amd64 4:15.2.0-4 [5160 B] Fetched 5160 B in 0s (328 kB/s) dpkg-name: info: moved 'gcc_4%3a15.2.0-4_amd64.deb' to '/srv/rebuilderd/tmp/tmp41xi3q1q/gcc_15.2.0-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.72-3.1 [494 kB] Fetched 494 kB in 0s (22.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzrhmwoye/autoconf_2.72-3.1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libheif1 amd64 1.20.2-2+b4 [601 kB] Fetched 601 kB in 0s (25.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv9fl7pjo/libheif1_1.20.2-2+b4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libffi8 amd64 3.5.2-3 [26.1 kB] Fetched 26.1 kB in 0s (1500 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfc0_6_4c/libffi8_3.5.2-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libjbig-dev amd64 2.1-6.1+b2 [31.4 kB] Fetched 31.4 kB in 0s (1828 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpro9no1x3/libjbig-dev_2.1-6.1+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxcb-icccm4 amd64 0.4.2-1 [27.5 kB] Fetched 27.5 kB in 0s (1684 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0dvgc8fj/libxcb-icccm4_0.4.2-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libaudit1 amd64 1:4.1.2-1+b1 [60.2 kB] Fetched 60.2 kB in 0s (4860 kB/s) dpkg-name: info: moved 'libaudit1_1%3a4.1.2-1+b1_amd64.deb' to '/srv/rebuilderd/tmp/tmptnw7y9b6/libaudit1_4.1.2-1+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libsharpyuv0 amd64 1.5.0-0.1 [116 kB] Fetched 116 kB in 0s (6429 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3an7ls61/libsharpyuv0_1.5.0-0.1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgcc-s1 amd64 15.2.0-11 [71.5 kB] Fetched 71.5 kB in 0s (4213 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpq3q_qjd4/libgcc-s1_15.2.0-11_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxcb-util1 amd64 0.4.1-1 [23.5 kB] Fetched 23.5 kB in 0s (1456 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqhz_5e26/libxcb-util1_0.4.1-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 hostname amd64 3.25 [11.0 kB] Fetched 11.0 kB in 0s (699 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpi9s_ior3/hostname_3.25_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libqt5test5t64 amd64 5.15.17+dfsg-5 [153 kB] Fetched 153 kB in 0s (5589 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpckha7mwy/libqt5test5t64_5.15.17+dfsg-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 base-passwd amd64 3.6.8 [54.6 kB] Fetched 54.6 kB in 0s (3966 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3kcmk1jt/base-passwd_3.6.8_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxcb-shape0 amd64 1.17.0-2+b1 [106 kB] Fetched 106 kB in 0s (8037 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptwfatid5/libxcb-shape0_1.17.0-2+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-2 [42.1 kB] Fetched 42.1 kB in 0s (2454 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr_6ppsds/libpipeline1_1.5.8-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3.13 amd64 3.13.11-1+b1 [770 kB] Fetched 770 kB in 0s (31.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy1p_d4vz/python3.13_3.13.11-1+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 x11-common all 1:7.7+26 [217 kB] Fetched 217 kB in 0s (11.5 MB/s) dpkg-name: info: moved 'x11-common_1%3a7.7+26_all.deb' to '/srv/rebuilderd/tmp/tmp_b0bakve/x11-common_7.7+26_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 ucf all 3.0052 [43.3 kB] Fetched 43.3 kB in 0s (2660 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfubvp8yq/ucf_3.0052_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libkadm5srv-mit12 amd64 1.22.1-2 [56.2 kB] Fetched 56.2 kB in 0s (3177 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpk30yg3iz/libkadm5srv-mit12_1.22.1-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libaudit-common all 1:4.1.2-1 [14.3 kB] Fetched 14.3 kB in 0s (911 kB/s) dpkg-name: info: moved 'libaudit-common_1%3a4.1.2-1_all.deb' to '/srv/rebuilderd/tmp/tmp1ybsnenl/libaudit-common_4.1.2-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 liblapack-dev amd64 3.12.1-7 [5894 kB] Fetched 5894 kB in 0s (82.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp__9513ni/liblapack-dev_3.12.1-7_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxkbcommon-x11-0 amd64 1.12.3-1 [17.0 kB] Fetched 17.0 kB in 0s (1060 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpf59z4eg1/libxkbcommon-x11-0_1.12.3-1_amd64.deb' Downloading dependency 255 of 481: libreadline8t64:amd64=8.3-3 Downloading dependency 256 of 481: libcamd3:amd64=1:7.12.1+dfsg-1 Downloading dependency 257 of 481: libkadm5clnt-mit12:amd64=1.22.1-2 Downloading dependency 258 of 481: qtchooser:amd64=66-2 Downloading dependency 259 of 481: libdbus-1-3:amd64=1.16.2-2 Downloading dependency 260 of 481: libgnutls-dane0t64:amd64=3.8.11-3 Downloading dependency 261 of 481: libhdf5-hl-310:amd64=1.14.5+repack-4 Downloading dependency 262 of 481: libncursesw6:amd64=6.5+20251123-1 Downloading dependency 263 of 481: sensible-utils:amd64=0.0.26 Downloading dependency 264 of 481: hicolor-icon-theme:amd64=0.18-2 Downloading dependency 265 of 481: patch:amd64=2.8-2 Downloading dependency 266 of 481: mawk:amd64=1.3.4.20250131-1 Downloading dependency 267 of 481: perl-modules-5.40:amd64=5.40.1-7 Downloading dependency 268 of 481: groff-base:amd64=1.23.0-10 Downloading dependency 269 of 481: libseccomp2:amd64=2.6.0-2+b1 Downloading dependency 270 of 481: libsm6:amd64=2:1.2.6-1 Downloading dependency 271 of 481: libbrotli-dev:amd64=1.1.0-2+b9 Downloading dependency 272 of 481: libqt6help6:amd64=6.9.2-3 Downloading dependency 273 of 481: 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libportaudio2:amd64=19.7.0-1 Downloading dependency 289 of 481: libaec-dev:amd64=1.1.4-2 Downloading dependency 290 of 481: libz3-4:amd64=4.13.3-1 Downloading dependency 291 of 481: libvulkan1:amd64=1.4.328.1-1 Downloading dependency 292 of 481: libbz2-1.0:amd64=1.0.8-6 Downloading dependency 293 of 481: libngtcp2-16:amd64=1.16.0-1 Downloading dependency 294 of 481: libmpfr6:amd64=4.2.2-2 Downloading dependency 295 of 481: rpcsvc-proto:amd64=1.4.3-1 Downloading dependency 296 of 481: libxcb1-dev:amd64=1.17.0-2+b1 Downloading dependency 297 of 481: libsuitesparseconfig7:amd64=1:7.12.1+dfsg-1 Downloading dependency 298 of 481: matlab-support-dev:amd64=0.3 Downloading dependency 299 of 481: libtext-wrapi18n-perl:amd64=0.06-10 Downloading dependency 300 of 481: dpkg:amd64=1.22.21 Downloading dependency 301 of 481: libelf1t64:amd64=0.194-1 Downloading dependency 302 of 481: fontconfig:amd64=2.15.0-2.4 Downloading dependency 303 of 481: imagemagick-7.q16:amd64=8:7.1.2.8+dfsg1-1 Downloading dependency 304 of 481: libqt6network6:amd64=6.9.2+dfsg-3 Downloading dependency 305 of 481: libhdf5-fortran-310:amd64=1.14.5+repack-4 Downloading dependency 306 of 481: x11proto-dev:amd64=2024.1-1 Downloading dependency 307 of 481: libzstd1:amd64=1.5.7+dfsg-2 Downloading dependency 308 of 481: libsndfile1:amd64=1.2.2-3 Downloading dependency 309 of 481: libkrb5-3:amd64=1.22.1-2 Downloading dependency 310 of 481: libqt5sql5t64:amd64=5.15.17+dfsg-5 Downloading dependency 311 of 481: libx11-data:amd64=2:1.8.12-1 Downloading dependency 312 of 481: libselinux1:amd64=3.9-4+b1 Downloading dependency 313 of 481: findutils:amd64=4.10.0-3 Downloading dependency 314 of 481: qt5-qmake:amd64=5.15.17+dfsg-5 Downloading dependency 315 of 481: libwebpdecoder3:amd64=1.5.0-0.1 Downloading dependency 316 of 481: libqt5opengl5t64:amd64=5.15.17+dfsg-5 Downloading dependency 317 of 481: libxinerama1:amd64=2:1.1.4-3+b4 Downloading dependency 318 of 481: libpython3-stdlib:amd64=3.13.9-2 Downloading dependency 319 of 481: libnghttp3-dev:amd64=1.12.0-1 Downloading dependency 320 of 481: libqt5dbus5t64:amd64=5.15.17+dfsg-5 Downloading dependency 321 of 481: libqscintilla2-qt6-15:amd64=2.14.1+dfsg-2 Downloading dependency 322 of 481: hdf5-helpers:amd64=1.14.5+repack-4 Downloading dependency 323 of 481: gfortran-15:amd64=15.2.0-11 Downloading dependency 324 of 481: libxcb-xinerama0:amd64=1.17.0-2+b1 Downloading dependency 325 of 481: libevdev2:amd64=1.13.6+dfsg-1 Downloading dependency 326 of 481: libtool:amd64=2.5.4-9 Downloading dependency 327 of 481: libwmflite-0.2-7:amd64=0.2.13-2 Downloading dependency 328 of 481: libpcre2-8-0:amd64=10.46-1 Downloading dependency 329 of 481: libgslcblas0:amd64=2.8+dfsg-5.1 Downloading dependency 330 of 481: libcc1-0:amd64=15.2.0-11 Downloading dependency 331 of 481: libgdbm-compat4t64:amd64=1.26-1 Downloading dependency 332 of 481: libxcb1:amd64=1.17.0-2+b1 Downloading dependency 333 of 481: libglib2.0-0t64:amd64=2.86.3-1 Downloading dependency 334 of 481: libdpkg-perl:amd64=1.22.21 Downloading dependency 335 of 481: tar:amd64=1.35+dfsg-3.1 Downloading dependency 336 of 481: libc6-dev:amd64=2.42-6 Downloading dependency 337 of 481: libnghttp2-14:amd64=1.64.0-1.1+b1 Downloading dependency 338 of 481: libflac14:amd64=1.5.0+ds-5 Downloading dependency 339 of 481: libp11-kit0:amd64=0.25.10-1 Downloading dependency 340 of 481: media-types:amd64=14.0.0 Downloading dependency 341 of 481: gfortran-x86-64-linux-gnu:amd64=4:15.2.0-4 Downloading dependency 342 of 481: liblzma-dev:amd64=5.8.1-2 Downloading dependency 343 of 481: gcc-15:amd64=15.2.0-11 Downloading dependency 344 of 481: libxkbcommon0:amd64=1.12.3-1 Downloading dependency 345 of 481: octave-common:amd64=10.3.0-3 Downloading dependency 346 of 481: libevent-2.1-7t64:amd64=2.1.12-stable-10+b1 Downloading dependency 347 of 481: libldap2:amd64=2.6.10+dfsg-1 Downloading dependency 348 of 481: libwayland-client0:amd64=1.24.0-2+b1 Downloading dependency 349 of 481: libcrypt1:amd64=1:4.5.1-1 Downloading dependency 350 of 481: dash:amd64=0.5.12-12 Downloading dependency 351 of 481: bsdextrautils:amd64=2.41.3-1 Downloading dependency 352 of 481: libblkid1:amd64=2.41.3-1 Downloading dependency 353 of 481: libgssrpc4t64:amd64=1.22.1-2 Downloading dependency 354 of 481: libpsl5t64:amd64=0.21.2-1.1+b1 Downloading dependency 355 of 481: libreadline-dev:amd64=8.3-3 Downloading dependency 356 of 481: readline-common:amd64=8.3-3 Downloading dependency 357 of 481: cpp-15:amd64=15.2.0-11 Downloading dependency 358 of 481: libsframe2:amd64=2.45.50.20251209-1 Downloading dependency 359 of 481: diffutils:amd64=1:3.12-1 Downloading dependency 360 of 481: gcc:amd64=4:15.2.0-4 Downloading dependency 361 of 481: autoconf:amd64=2.72-3.1 Downloading dependency 362 of 481: libheif1:amd64=1.20.2-2+b4 Downloading dependency 363 of 481: libffi8:amd64=3.5.2-3 Downloading dependency 364 of 481: libjbig-dev:amd64=2.1-6.1+b2 Downloading dependency 365 of 481: libxcb-icccm4:amd64=0.4.2-1 Downloading dependency 366 of 481: libaudit1:amd64=1:4.1.2-1+b1 Downloading dependency 367 of 481: libsharpyuv0:amd64=1.5.0-0.1 Downloading dependency 368 of 481: libgcc-s1:amd64=15.2.0-11 Downloading dependency 369 of 481: libxcb-util1:amd64=0.4.1-1 Downloading dependency 370 of 481: hostname:amd64=3.25 Downloading dependency 371 of 481: libqt5test5t64:amd64=5.15.17+dfsg-5 Downloading dependency 372 of 481: base-passwd:amd64=3.6.8 Downloading dependency 373 of 481: libxcb-shape0:amd64=1.17.0-2+b1 Downloading dependency 374 of 481: libpipeline1:amd64=1.5.8-2 Downloading dependency 375 of 481: python3.13:amd64=3.13.11-1+b1 Downloading dependency 376 of 481: x11-common:amd64=1:7.7+26 Downloading dependency 377 of 481: ucf:amd64=3.0052 Downloading dependency 378 of 481: libkadm5srv-mit12:amd64=1.22.1-2 Downloading dependency 379 of 481: libaudit-common:amd64=1:4.1.2-1 Downloading dependency 380 of 481: liblapack-dev:amd64=3.12.1-7 Downloading dependency 381 of 481: libxkbcommon-x11-0:amd64=1.12.3-1 Downloading dependency 382 of 481: gzip:amd64=1.13-1Get:1 http://deb.debian.org/debian unstable/main amd64 gzip amd64 1.13-1 [138 kB] Fetched 138 kB in 0s (11.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprx35e_uj/gzip_1.13-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libqt6core6t64 amd64 6.9.2+dfsg-3 [1897 kB] Fetched 1897 kB in 0s (55.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpiz2_tsu4/libqt6core6t64_6.9.2+dfsg-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 g++-15 amd64 15.2.0-11 [24.9 kB] Fetched 24.9 kB in 0s (2207 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_utll5k_/g++-15_15.2.0-11_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libitm1 amd64 15.2.0-11 [26.5 kB] Fetched 26.5 kB in 0s (1659 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpunasz7i3/libitm1_15.2.0-11_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libc-gconv-modules-extra amd64 2.42-6 [1123 kB] Fetched 1123 kB in 0s (50.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5w5p62mn/libc-gconv-modules-extra_2.42-6_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 bc amd64 1.07.1-4 [103 kB] Fetched 103 kB in 0s (2618 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpll44s749/bc_1.07.1-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libglu1-mesa-dev amd64 9.0.2-1.1+b3 [223 kB] Fetched 223 kB in 0s (15.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz56xc2v6/libglu1-mesa-dev_9.0.2-1.1+b3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgnutls28-dev amd64 3.8.11-3 [1448 kB] Fetched 1448 kB in 0s (47.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4g3tue30/libgnutls28-dev_3.8.11-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libnghttp3-9 amd64 1.12.0-1 [68.4 kB] Fetched 68.4 kB in 0s (5935 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpg3qgsxvy/libnghttp3-9_1.12.0-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 tzdata all 2025c-2 [263 kB] Fetched 263 kB in 0s (19.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpiz168i0n/tzdata_2025c-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.29 [92.6 kB] Fetched 92.6 kB in 0s (7607 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxacacr4e/libdebhelper-perl_13.29_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 qt5-qmake-bin amd64 5.15.17+dfsg-5 [1074 kB] Fetched 1074 kB in 0s (32.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpccuhuawo/qt5-qmake-bin_5.15.17+dfsg-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libatomic1 amd64 15.2.0-11 [9532 B] Fetched 9532 B in 0s (798 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpefmekc3m/libatomic1_15.2.0-11_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 imagemagick amd64 8:7.1.2.8+dfsg1-1 [21.8 kB] Fetched 21.8 kB in 0s (854 kB/s) dpkg-name: info: moved 'imagemagick_8%3a7.1.2.8+dfsg1-1_amd64.deb' to '/srv/rebuilderd/tmp/tmpq_4zw65t/imagemagick_7.1.2.8+dfsg1-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 init-system-helpers all 1.69 [39.3 kB] Fetched 39.3 kB in 0s (3251 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqcioz171/init-system-helpers_1.69_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libc-bin amd64 2.42-6 [674 kB] Fetched 674 kB in 0s (30.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsx6w6m00/libc-bin_2.42-6_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libfontconfig1 amd64 2.15.0-2.4 [401 kB] Fetched 401 kB in 0s (28.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgamja0z6/libfontconfig1_2.15.0-2.4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgl1 amd64 1.7.0-1+b2 [89.5 kB] Fetched 89.5 kB in 0s (7693 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6pgna7nf/libgl1_1.7.0-1+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libtiff-dev amd64 4.7.1-1 [504 kB] Fetched 504 kB in 0s (24.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpaae7j5ho/libtiff-dev_4.7.1-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libcurl3t64-gnutls amd64 8.18.0~rc2-1 [405 kB] Fetched 405 kB in 0s (29.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0r5tmy_n/libcurl3t64-gnutls_8.18.0~rc2-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 cpp amd64 4:15.2.0-4 [1564 B] Fetched 1564 B in 0s (107 kB/s) dpkg-name: info: moved 'cpp_4%3a15.2.0-4_amd64.deb' to '/srv/rebuilderd/tmp/tmp67mmcmw0/cpp_15.2.0-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 gfortran-15-x86-64-linux-gnu amd64 15.2.0-11 [12.7 MB] Fetched 12.7 MB in 0s (137 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpi8z1b_t3/gfortran-15-x86-64-linux-gnu_15.2.0-11_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxcb-image0 amd64 0.4.0-2+b2 [22.2 kB] Fetched 22.2 kB in 0s (1904 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_w8l9ykz/libxcb-image0_0.4.0-2+b2_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251216T203730Z forky/main amd64 libegl-mesa0 amd64 25.2.8-2+b2 [123 kB] Fetched 123 kB in 0s (7248 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9fuegme9/libegl-mesa0_25.2.8-2+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxcb-randr0 amd64 1.17.0-2+b1 [117 kB] Fetched 117 kB in 0s (10.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_0wucmjz/libxcb-randr0_1.17.0-2+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxcb-keysyms1 amd64 0.4.1-1 [16.7 kB] Fetched 16.7 kB in 0s (1496 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_cp45x_w/libxcb-keysyms1_0.4.1-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgnutls-openssl27t64 amd64 3.8.11-3 [469 kB] Fetched 469 kB in 0s (33.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpexa1el8e/libgnutls-openssl27t64_3.8.11-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libdav1d7 amd64 1.5.2-1 [564 kB] Fetched 564 kB in 0s (39.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxh8qpbk2/libdav1d7_1.5.2-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.23.2-1 [772 kB] Fetched 772 kB in 0s (44.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphv5ipv5v/autopoint_0.23.2-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libnettle8t64 amd64 3.10.2-1 [307 kB] Fetched 307 kB in 0s (24.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpiykbcy71/libnettle8t64_3.10.2-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libkrb5support0 amd64 1.22.1-2 [33.1 kB] Fetched 33.1 kB in 0s (2122 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3hslcadc/libkrb5support0_1.22.1-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.20-2 [325 kB] Fetched 325 kB in 0s (24.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0duxcz9l/m4_1.4.20-2_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251216T203730Z forky/main amd64 libgl1-mesa-dri amd64 25.2.8-2+b2 [48.2 kB] Fetched 48.2 kB in 0s (3100 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpw5r5ihf3/libgl1-mesa-dri_25.2.8-2+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libvorbis0a amd64 1.3.7-3 [90.0 kB] Fetched 90.0 kB in 0s (7920 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx6mhnldt/libvorbis0a_1.3.7-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libglvnd0 amd64 1.7.0-1+b2 [52.0 kB] Fetched 52.0 kB in 0s (3227 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4kgostr0/libglvnd0_1.7.0-1+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libfreetype6 amd64 2.13.3+dfsg-1 [452 kB] Fetched 452 kB in 0s (29.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplgbltv18/libfreetype6_2.13.3+dfsg-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 liblerc4 amd64 4.0.0+ds-5 [183 kB] Fetched 183 kB in 0s (15.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd5r_u1u7/liblerc4_4.0.0+ds-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.18.1-3 [878 kB] Fetched 878 kB in 0s (54.9 MB/s) dpkg-name: info: moved 'automake_1%3a1.18.1-3_all.deb' to '/srv/rebuilderd/tmp/tmp94ikh5cf/automake_1.18.1-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 base-files amd64 14 [72.9 kB] Fetched 72.9 kB in 0s (4907 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx5me29yc/base-files_14_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libexpat1 amd64 2.7.3-1 [112 kB] Fetched 112 kB in 0s (6618 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr_oj8puy/libexpat1_2.7.3-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 liblerc-dev amd64 4.0.0+ds-5 [183 kB] Fetched 183 kB in 0s (10.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1bkpumaa/liblerc-dev_4.0.0+ds-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxcb-sync1 amd64 1.17.0-2+b1 [109 kB] Fetched 109 kB in 0s (9761 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpe2f_y3x9/libxcb-sync1_1.17.0-2+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 binutils-common amd64 2.45.50.20251209-1 [2541 kB] Fetched 2541 kB in 0s (78.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9ajmlg34/binutils-common_2.45.50.20251209-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libhdf5-cpp-310 amd64 1.14.5+repack-4 [146 kB] Fetched 146 kB in 0s (8710 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpctpkzy80/libhdf5-cpp-310_1.14.5+repack-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxdmcp6 amd64 1:1.1.5-1 [27.8 kB] Fetched 27.8 kB in 0s (2692 kB/s) dpkg-name: info: moved 'libxdmcp6_1%3a1.1.5-1_amd64.deb' to '/srv/rebuilderd/tmp/tmp8_q1bno8/libxdmcp6_1.1.5-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.29 [943 kB] Fetched 943 kB in 0s (36.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmpy0pzd0/debhelper_13.29_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 debconf all 1.5.91 [121 kB] Fetched 121 kB in 0s (10.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0is1_yyc/debconf_1.5.91_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251216T203730Z forky/main amd64 linux-libc-dev all 6.17.11-1 [2563 kB] Fetched 2563 kB in 0s (92.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpw59nf9_x/linux-libc-dev_6.17.11-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-10 [57.8 kB] Fetched 57.8 kB in 0s (5090 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc66a3fur/libsasl2-2_2.1.28+dfsg1-10_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libmpg123-0t64 amd64 1.33.3-1 [155 kB] Fetched 155 kB in 0s (9121 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9ki4ndkr/libmpg123-0t64_1.33.3-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpam-runtime all 1.7.0-5 [249 kB] Fetched 249 kB in 0s (12.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp56g24t69/libpam-runtime_1.7.0-5_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libjpeg-dev amd64 1:2.1.5-4 [72.2 kB] Fetched 72.2 kB in 0s (4277 kB/s) dpkg-name: info: moved 'libjpeg-dev_1%3a2.1.5-4_amd64.deb' to '/srv/rebuilderd/tmp/tmpz_5vhtdn/libjpeg-dev_2.1.5-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libproc2-0 amd64 2:4.0.4-9 [65.6 kB] Fetched 65.6 kB in 0s (3944 kB/s) dpkg-name: info: moved 'libproc2-0_2%3a4.0.4-9_amd64.deb' to '/srv/rebuilderd/tmp/tmpvtyw_ygv/libproc2-0_4.0.4-9_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 openssl-provider-legacy amd64 3.5.4-1 [308 kB] Fetched 308 kB in 0s (18.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuo57j4l_/openssl-provider-legacy_3.5.4-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libcom-err2 amd64 1.47.2-3+b4 [25.1 kB] Fetched 25.1 kB in 0s (2155 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpguy21yvb/libcom-err2_1.47.2-3+b4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libwebp7 amd64 1.5.0-0.1 [318 kB] Fetched 318 kB in 0s (18.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphazaj7bm/libwebp7_1.5.0-0.1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libqt5core5t64 amd64 5.15.17+dfsg-5 [1900 kB] Fetched 1900 kB in 0s (41.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqg55dg43/libqt5core5t64_5.15.17+dfsg-5_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251216T203730Z forky/main amd64 libglx-mesa0 amd64 25.2.8-2+b2 [116 kB] Fetched 116 kB in 0s (7257 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx0r2ere_/libglx-mesa0_25.2.8-2+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 g++-15-x86-64-linux-gnu amd64 15.2.0-11 [13.2 MB] Fetched 13.2 MB in 0s (126 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwhqy489j/g++-15-x86-64-linux-gnu_15.2.0-11_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libqt5printsupport5t64 amd64 5.15.17+dfsg-5 [208 kB] Fetched 208 kB in 0s (7525 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpk6i_dzgp/libqt5printsupport5t64_5.15.17+dfsg-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libc6 amd64 2.42-6 [1889 kB] Fetched 1889 kB in 0s (52.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfrvy6ex8/libc6_2.42-6_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxext-dev amd64 2:1.3.4-1+b3 [104 kB] Fetched 104 kB in 0s (9164 kB/s) dpkg-name: info: moved 'libxext-dev_2%3a1.3.4-1+b3_amd64.deb' to '/srv/rebuilderd/tmp/tmphxnvb_gs/libxext-dev_1.3.4-1+b3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 shared-mime-info amd64 2.4-5+b3 [758 kB] Fetched 758 kB in 0s (51.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj55pstlr/shared-mime-info_2.4-5+b3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libqt6dbus6 amd64 6.9.2+dfsg-3 [269 kB] Fetched 269 kB in 0s (15.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9u542psg/libqt6dbus6_6.9.2+dfsg-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libglx-dev amd64 1.7.0-1+b2 [15.8 kB] Fetched 15.8 kB in 0s (975 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpun1m5acj/libglx-dev_1.7.0-1+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libaec0 amd64 1.1.4-2 [23.8 kB] Fetched 23.8 kB in 0s (1391 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptqrx0ufi/libaec0_1.1.4-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libvulkan-dev amd64 1.4.328.1-1 [1679 kB] Fetched 1679 kB in 0s (74.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6cf5ogbi/libvulkan-dev_1.4.328.1-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libx11-6 amd64 2:1.8.12-1 [815 kB] Fetched 815 kB in 0s (45.3 MB/s) dpkg-name: info: moved 'libx11-6_2%3a1.8.12-1_amd64.deb' to '/srv/rebuilderd/tmp/tmp0_5rdpnh/libx11-6_1.8.12-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.22.1-2 [139 kB] Fetched 139 kB in 0s (8084 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3kectrug/libgssapi-krb5-2_1.22.1-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libblas-dev amd64 3.12.1-7 [229 kB] Fetched 229 kB in 0s (19.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprsb27mtw/libblas-dev_3.12.1-7_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgomp1 amd64 15.2.0-11 [140 kB] Fetched 140 kB in 0s (8400 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjyibcfgb/libgomp1_15.2.0-11_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpsl-dev amd64 0.21.2-1.1+b1 [77.6 kB] Fetched 77.6 kB in 0s (4618 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxb7m9tya/libpsl-dev_0.21.2-1.1+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libasound2-data all 1.2.15-2 [21.1 kB] Fetched 21.1 kB in 0s (2048 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxw65ljxm/libasound2-data_1.2.15-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 21 [12.2 kB] Fetched 12.2 kB in 0s (1171 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpynxuqqhq/dh-autoreconf_21_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libqt5concurrent5t64 amd64 5.15.17+dfsg-5 [45.4 kB] Fetched 45.4 kB in 0s (2050 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuo9uprac/libqt5concurrent5t64_5.15.17+dfsg-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libattr1 amd64 1:2.5.2-3 [22.9 kB] Fetched 22.9 kB in 0s (1475 kB/s) dpkg-name: info: moved 'libattr1_1%3a2.5.2-3_amd64.deb' to '/srv/rebuilderd/tmp/tmpa9gmyz5j/libattr1_2.5.2-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libwacom9 amd64 2.16.1-1 [26.8 kB] Fetched 26.8 kB in 0s (1557 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4v83cy2r/libwacom9_2.16.1-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libavahi-common3 amd64 0.8-17 [47.3 kB] Fetched 47.3 kB in 0s (4612 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwngfraf0/libavahi-common3_0.8-17_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libtinfo6 amd64 6.5+20251123-1 [353 kB] Fetched 353 kB in 0s (19.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8ouz27jt/libtinfo6_6.5+20251123-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libblas3 amd64 3.12.1-7 [215 kB] Fetched 215 kB in 0s (11.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6a4w6631/libblas3_3.12.1-7_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 debianutils amd64 5.23.2 [92.4 kB] Fetched 92.4 kB in 0s (5380 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpopogwu1m/debianutils_5.23.2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 octave-dev amd64 10.3.0-3 [1072 kB] Fetched 1072 kB in 0s (12.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzzv12z83/octave-dev_10.3.0-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 qtbase5-dev amd64 5.15.17+dfsg-5 [1124 kB] Fetched 1124 kB in 0s (28.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptpbromdj/qtbase5-dev_5.15.17+dfsg-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libdebconfclient0 amd64 0.282+b2 [11.2 kB] Fetched 11.2 kB in 0s (740 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp58yk_kk6/libdebconfclient0_0.282+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1+b2 [919 kB] Fetched 919 kB in 0s (37.3 MB/s) dpkg-name: info: moved 'zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1+b2_amd64.deb' to '/srv/rebuilderd/tmp/tmp30oj3bus/zlib1g-dev_1.3.dfsg+really1.3.1-1+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libqt6printsupport6 amd64 6.9.2+dfsg-3 [221 kB] Fetched 221 kB in 0s (11.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpobk0ydu9/libqt6printsupport6_6.9.2+dfsg-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libqt5widgets5t64 amd64 5.15.17+dfsg-5 [2425 kB] Fetched 2425 kB in 0s (48.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9yyndhwl/libqt5widgets5t64_5.15.17+dfsg-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libkrb5-dev amd64 1.22.1-2 [16.1 kB] Fetched 16.1 kB in 0s (1455 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws_5tsvy/libkrb5-dev_1.22.1-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libqt6openglwidgets6 amd64 6.9.2+dfsg-3 [50.5 kB] Fetched 50.5 kB in 0s (3085 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2zyntbc2/libqt6openglwidgets6_6.9.2+dfsg-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 coreutils amd64 9.7-3 [3024 kB] Fetched 3024 kB in 0s (65.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp77d73man/coreutils_9.7-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libglu1-mesa amd64 9.0.2-1.1+b3 [184 kB] Fetched 184 kB in 0s (14.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkc5dmzip/libglu1-mesa_9.0.2-1.1+b3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libquadmath0 amd64 15.2.0-11 [145 kB] Fetched 145 kB in 0s (12.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp87dse6w8/libquadmath0_15.2.0-11_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libjbig0 amd64 2.1-6.1+b2 [32.1 kB] Fetched 32.1 kB in 0s (1993 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpywscb_29/libjbig0_2.1-6.1+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libraw23t64 amd64 0.21.4-2 [390 kB] Fetched 390 kB in 0s (26.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpaye6d2v_/libraw23t64_0.21.4-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libqt5gui5t64 amd64 5.15.17+dfsg-5 [3533 kB] Fetched 3533 kB in 0s (57.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpth09msxk/libqt5gui5t64_5.15.17+dfsg-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxcb-render0 amd64 1.17.0-2+b1 [115 kB] Fetched 115 kB in 0s (9636 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3fbi4xk_/libxcb-render0_1.17.0-2+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.1-1 [1469 kB] Fetched 1469 kB in 0s (68.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkfao8uwi/man-db_2.13.1-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 grep amd64 3.12-1 [443 kB] Fetched 443 kB in 0s (22.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjr5yj304/grep_3.12-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libice6 amd64 2:1.1.1-1 [65.4 kB] Fetched 65.4 kB in 0s (4256 kB/s) dpkg-name: info: moved 'libice6_2%3a1.1.1-1_amd64.deb' to '/srv/rebuilderd/tmp/tmpgowdy2k0/libice6_1.1.1-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libstdc++-15-dev amd64 15.2.0-11 [2444 kB] Fetched 2444 kB in 0s (58.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwrc5_vtj/libstdc++-15-dev_15.2.0-11_amd64.deb' dpkg-buildpackage: info: source package debootsnap-dummy dpkg-buildpackage: info: source version 1.0 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Equivs Dummy Package Generator dpkg-buildpackage: info: host architecture amd64 dpkg-source --before-build . debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/debootsnap-dummy/ dh_install dh_installdocs dh_installchangelogs dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'debootsnap-dummy' in '../debootsnap-dummy_1.0_all.deb'. dpkg-genbuildinfo --build=binary -O../debootsnap-dummy_1.0_amd64.buildinfo dpkg-genchanges --build=binary -O../debootsnap-dummy_1.0_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) The package has been created. Attention, the package has been created in the /srv/rebuilderd/tmp/tmp5pfr_jli/cache directory, not in ".." as indicated by the message above! I: automatically chosen mode: unshare I: chroot architecture amd64 is equal to the host's architecture I: using /srv/rebuilderd/tmp/mmdebstrap.XudXAEwM3O as tempdir I: running --setup-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/setup00.sh /srv/rebuilderd/tmp/mmdebstrap.XudXAEwM3O 127.0.0.1 - - [17/Dec/2025 21:21:40] code 404, message File not found 127.0.0.1 - - [17/Dec/2025 21:21:40] "GET /./InRelease HTTP/1.1" 404 - Ign:1 http://localhost:40557 ./ InRelease 127.0.0.1 - - [17/Dec/2025 21:21:40] "GET /./Release HTTP/1.1" 200 - Get:2 http://localhost:40557 ./ Release [462 B] 127.0.0.1 - - [17/Dec/2025 21:21:40] code 404, message File not found 127.0.0.1 - - [17/Dec/2025 21:21:40] "GET /./Release.gpg HTTP/1.1" 404 - Ign:3 http://localhost:40557 ./ Release.gpg 127.0.0.1 - - [17/Dec/2025 21:21:40] "GET /./Packages HTTP/1.1" 200 - Get:4 http://localhost:40557 ./ Packages [599 kB] Fetched 599 kB in 0s (23.9 MB/s) Reading package lists... usr-is-merged found but not real -- not running merged-usr setup hook I: skipping apt-get update because it was already run I: downloading packages with apt... 127.0.0.1 - 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I: extracting archives... I: running --extract-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/extract00.sh /srv/rebuilderd/tmp/mmdebstrap.XudXAEwM3O 127.0.0.1 - - [17/Dec/2025 21:21:42] code 404, message File not found 127.0.0.1 - - [17/Dec/2025 21:21:42] "GET /./InRelease HTTP/1.1" 404 - Ign:1 http://localhost:40557 ./ InRelease 127.0.0.1 - - [17/Dec/2025 21:21:42] "GET /./Release HTTP/1.1" 304 - Hit:2 http://localhost:40557 ./ Release 127.0.0.1 - - [17/Dec/2025 21:21:42] code 404, message File not found 127.0.0.1 - - [17/Dec/2025 21:21:42] "GET /./Release.gpg HTTP/1.1" 404 - Ign:3 http://localhost:40557 ./ Release.gpg Reading package lists... usr-is-merged found but not real -- not running merged-usr extract hook I: installing essential packages... 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127.0.0.1 - - [17/Dec/2025 21:23:24] "GET /./octave-dev_10.3.0-3_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [17/Dec/2025 21:23:24] "GET /./debootsnap-dummy_1.0_all.deb HTTP/1.1" 200 - I: running --customize-hook directly: /srv/rebuilderd/tmp/tmp5pfr_jli/apt_install.sh /srv/rebuilderd/tmp/mmdebstrap.XudXAEwM3O Reading package lists... Building dependency tree... Reading state information... libstdc++6 is already the newest version (15.2.0-11). libstdc++6 set to manually installed. gfortran is already the newest version (4:15.2.0-4). gfortran set to manually installed. libc-dev-bin is already the newest version (2.42-6). libc-dev-bin set to manually installed. libdeflate-dev is already the newest version (1.23-2). libdeflate-dev set to manually installed. libsensors5 is already the newest version (1:3.6.2-2). libsensors5 set to manually installed. libxml-libxml-perl is already the newest version (2.0207+dfsg+really+2.0134-7). libxml-libxml-perl set to manually installed. comerr-dev is already the newest version (2.1-1.47.2-3+b4). comerr-dev set to manually installed. libb2-1 is already the newest version (0.98.1-1.1+b2). libb2-1 set to manually installed. libedit2 is already the newest version (3.1-20250104-1). libedit2 set to manually installed. libxcb-present0 is already the newest version (1.17.0-2+b1). libxcb-present0 set to manually installed. xkb-data is already the newest version (2.46-1). xkb-data set to manually installed. g++-x86-64-linux-gnu is already the newest version (4:15.2.0-4). g++-x86-64-linux-gnu set to manually installed. libqt6xml6 is already the newest version (6.9.2+dfsg-3). libqt6xml6 set to manually installed. mesa-libgallium is already the newest version (25.2.8-2+b2). mesa-libgallium set to manually installed. libmp3lame0 is already the newest version (3.100-6+b3). libmp3lame0 set to manually installed. texinfo is already the newest version (7.2-5). texinfo set to manually installed. sed is already the newest version (4.9-2). libxcb-xkb1 is already the newest version (1.17.0-2+b1). libxcb-xkb1 set to manually installed. libldap-dev is already the newest version (2.6.10+dfsg-1). libldap-dev set to manually installed. libhdf5-310 is already the newest version (1.14.5+repack-4). libhdf5-310 set to manually installed. python3 is already the newest version (3.13.9-2). python3 set to manually installed. ncurses-base is already the newest version (6.5+20251123-1). librtmp1 is already the newest version (2.4+20151223.gitfa8646d.1-3). librtmp1 set to manually installed. libglpk40 is already the newest version (5.0-2). libglpk40 set to manually installed. libuchardet0 is already the newest version (0.0.8-2). libuchardet0 set to manually installed. libxcb-xfixes0 is already the newest version (1.17.0-2+b1). libxcb-xfixes0 set to manually installed. gettext-base is already the newest version (0.23.2-1). gettext-base set to manually installed. libdrm-amdgpu1 is already the newest version (2.4.129-1). libdrm-amdgpu1 set to manually installed. libssh2-1t64 is already the newest version (1.11.1-1). libssh2-1t64 set to manually installed. bash is already the newest version (5.3-1). libicu76 is already the newest version (76.1-4). libicu76 set to manually installed. libamd3 is already the newest version (1:7.12.1+dfsg-1). libamd3 set to manually installed. libde265-0 is already the newest version (1.0.16-1+b1). libde265-0 set to manually installed. libegl1 is already the newest version (1.7.0-1+b2). libegl1 set to manually installed. libpam-modules is already the newest version (1.7.0-5). libtsan2 is already the newest version (15.2.0-11). libtsan2 set to manually installed. libxcb-cursor0 is already the newest version (0.1.5-1). libxcb-cursor0 set to manually installed. libwebpdemux2 is already the newest version (1.5.0-0.1). libwebpdemux2 set to manually installed. libcrypt-dev is already the newest version (1:4.5.1-1). libcrypt-dev set to manually installed. libgudev-1.0-0 is already the newest version (238-7). libgudev-1.0-0 set to manually installed. tex-common is already the newest version (6.20). tex-common set to manually installed. libduktape207 is already the newest version (2.7.0-2+b2). libduktape207 set to manually installed. libfftw3-quad3 is already the newest version (3.3.10-2+b1). libfftw3-quad3 set to manually installed. cpp-x86-64-linux-gnu is already the newest version (4:15.2.0-4). cpp-x86-64-linux-gnu set to manually installed. libjpeg62-turbo is already the newest version (1:2.1.5-4). libjpeg62-turbo set to manually installed. libperl5.40 is already the newest version (5.40.1-7). libperl5.40 set to manually installed. libmd0 is already the newest version (1.1.0-2+b1). zlib1g is already the newest version (1:1.3.dfsg+really1.3.1-1+b2). libcap2 is already the newest version (1:2.75-10+b2). libfftw3-bin is already the newest version (3.3.10-2+b1). libfftw3-bin set to manually installed. libgmp-dev is already the newest version (2:6.3.0+dfsg-5). libgmp-dev set to manually installed. libssl3t64 is already the newest version (3.5.4-1). libheif-plugin-libde265 is already the newest version (1.20.2-2+b4). libheif-plugin-libde265 set to manually installed. fontconfig-config is already the newest version (2.15.0-2.4). fontconfig-config set to manually installed. dpkg-dev is already the newest version (1.22.21). dpkg-dev set to manually installed. libpython3.13-stdlib is already the newest version (3.13.11-1+b1). libpython3.13-stdlib set to manually installed. build-essential is already the newest version (12.12). build-essential set to manually installed. libheif-plugin-dav1d is already the newest version (1.20.2-2+b4). libheif-plugin-dav1d set to manually installed. libubsan1 is already the newest version (15.2.0-11). libubsan1 set to manually installed. libncurses6 is already the newest version (6.5+20251123-1). libncurses6 set to manually installed. libgraphite2-3 is already the newest version (1.3.14-11). libgraphite2-3 set to manually installed. libfftw3-dev is already the newest version (3.3.10-2+b1). libfftw3-dev set to manually installed. xz-utils is already the newest version (5.8.1-2). xz-utils set to manually installed. krb5-multidev is already the newest version (1.22.1-2). krb5-multidev set to manually installed. libsamplerate0 is already the newest version (0.2.2-4+b2). libsamplerate0 set to manually installed. libxcb-render-util0 is already the newest version (0.3.10-1). libxcb-render-util0 set to manually installed. libqt5xml5t64 is already the newest version (5.15.17+dfsg-5). libqt5xml5t64 set to manually installed. libxxf86vm1 is already the newest version (1:1.1.4-2). libxxf86vm1 set to manually installed. gcc-x86-64-linux-gnu is already the newest version (4:15.2.0-4). gcc-x86-64-linux-gnu set to manually installed. libharfbuzz0b is already the newest version (12.2.0-1). libharfbuzz0b set to manually installed. libzstd-dev is already the newest version (1.5.7+dfsg-2). libzstd-dev set to manually installed. libjpeg62-turbo-dev is already the newest version (1:2.1.5-4). libjpeg62-turbo-dev set to manually installed. libasound2t64 is already the newest version (1.2.15-2). libasound2t64 set to manually installed. libqt5network5t64 is already the newest version (5.15.17+dfsg-5). libqt5network5t64 set to manually installed. libsensors-config is already the newest version (1:3.6.2-2). libsensors-config set to manually installed. gcc-15-x86-64-linux-gnu is already the newest version (15.2.0-11). gcc-15-x86-64-linux-gnu set to manually installed. libxcursor1 is already the newest version (1:1.2.3-1). libxcursor1 set to manually installed. libisl23 is already the newest version (0.27-1). libisl23 set to manually installed. libmagic1t64 is already the newest version (1:5.46-5). libmagic1t64 set to manually installed. libncurses-dev is already the newest version (6.5+20251123-1). libncurses-dev set to manually installed. libuuid1 is already the newest version (2.41.3-1). libpciaccess0 is already the newest version (0.17-3+b3). libpciaccess0 set to manually installed. libtasn1-6-dev is already the newest version (4.20.0-2). libtasn1-6-dev set to manually installed. libudev1 is already the newest version (259~rc3-1). libogg0 is already the newest version (1.3.6-2). libogg0 set to manually installed. libspqr4 is already the newest version (1:7.12.1+dfsg-1). libspqr4 set to manually installed. libwebp-dev is already the newest version (1.5.0-0.1). libwebp-dev set to manually installed. libmtdev1t64 is already the newest version (1.1.7-1). libmtdev1t64 set to manually installed. libxcb-shm0 is already the newest version (1.17.0-2+b1). libxcb-shm0 set to manually installed. libidn2-dev is already the newest version (2.3.8-4). libidn2-dev set to manually installed. file is already the newest version (1:5.46-5). file set to manually installed. libwebpmux3 is already the newest version (1.5.0-0.1). libwebpmux3 set to manually installed. libgcc-15-dev is already the newest version (15.2.0-11). libgcc-15-dev set to manually installed. fonts-dejavu-mono is already the newest version (2.37-8). fonts-dejavu-mono set to manually installed. libhogweed6t64 is already the newest version (3.10.2-1). libhogweed6t64 set to manually installed. qtbase5-dev-tools is already the newest version (5.15.17+dfsg-5). qtbase5-dev-tools set to manually installed. libfftw3-double3 is already the newest version (3.3.10-2+b1). libfftw3-double3 set to manually installed. libinput-bin is already the newest version (1.30.0-1). libinput-bin set to manually installed. libvorbisenc2 is already the newest version (1.3.7-3). libvorbisenc2 set to manually installed. libgnutls30t64 is already the newest version (3.8.11-3). libgnutls30t64 set to manually installed. libgprofng0 is already the newest version (2.45.50.20251209-1). libgprofng0 set to manually installed. libxml-sax-base-perl is already the newest version (1.09-3). libxml-sax-base-perl set to manually installed. autotools-dev is already the newest version (20240727.1). autotools-dev set to manually installed. libqt6sql6 is already the newest version (6.9.2+dfsg-3). libqt6sql6 set to manually installed. liblsan0 is already the newest version (15.2.0-11). liblsan0 set to manually installed. perl-base is already the newest version (5.40.1-7). libxcb-dri3-0 is already the newest version (1.17.0-2+b1). libxcb-dri3-0 set to manually installed. binutils is already the newest version (2.45.50.20251209-1). binutils set to manually installed. libhdf5-dev is already the newest version (1.14.5+repack-4). libhdf5-dev set to manually installed. libsz2 is already the newest version (1.1.4-2). libsz2 set to manually installed. libmagickcore-7.q16-10 is already the newest version (8:7.1.2.8+dfsg1-1). libmagickcore-7.q16-10 set to manually installed. libx11-xcb1 is already the newest version (2:1.8.12-1). libx11-xcb1 set to manually installed. libngtcp2-crypto-ossl0 is already the newest version (1.16.0-1). libngtcp2-crypto-ossl0 set to manually installed. nettle-dev is already the newest version (3.10.2-1). nettle-dev set to manually installed. libmd4c0 is already the newest version (0.5.2-2+b1). libmd4c0 set to manually installed. libcap-ng0 is already the newest version (0.8.5-4+b2). libkdb5-10t64 is already the newest version (1.22.1-2). libkdb5-10t64 set to manually installed. libmpc3 is already the newest version (1.3.1-2). libmpc3 set to manually installed. libjxl0.11 is already the newest version (0.11.1-6). libjxl0.11 set to manually installed. libproxy1v5 is already the newest version (0.5.12-1). libproxy1v5 set to manually installed. imagemagick-7-common is already the newest version (8:7.1.2.8+dfsg1-1). imagemagick-7-common set to manually installed. libxcb-xinput0 is already the newest version (1.17.0-2+b1). libxcb-xinput0 set to manually installed. libltdl7 is already the newest version (2.5.4-9). libltdl7 set to manually installed. libxfixes3 is already the newest version (1:6.0.0-2+b4). libxfixes3 set to manually installed. pkgconf-bin is already the newest version (1.8.1-4). pkgconf-bin set to manually installed. intltool-debian is already the newest version (0.35.0+20060710.6). intltool-debian set to manually installed. g++ is already the newest version (4:15.2.0-4). g++ set to manually installed. libctf0 is already the newest version (2.45.50.20251209-1). libctf0 set to manually installed. libbsd0 is already the newest version (0.12.2-2). libbsd0 set to manually installed. libdeflate0 is already the newest version (1.23-2). libdeflate0 set to manually installed. perl is already the newest version (5.40.1-7). perl set to manually installed. libacl1 is already the newest version (2.3.2-2+b1). libgmpxx4ldbl is already the newest version (2:6.3.0+dfsg-5). libgmpxx4ldbl set to manually installed. libqt6opengl6 is already the newest version (6.9.2+dfsg-3). libqt6opengl6 set to manually installed. binutils-x86-64-linux-gnu is already the newest version (2.45.50.20251209-1). binutils-x86-64-linux-gnu set to manually installed. dh-strip-nondeterminism is already the newest version (1.15.0-1). dh-strip-nondeterminism set to manually installed. sysvinit-utils is already the newest version (3.15-6). libpam0g is already the newest version (1.7.0-5). po-debconf is already the newest version (1.0.22). po-debconf set to manually installed. libgdbm6t64 is already the newest version (1.26-1). libgdbm6t64 set to manually installed. dh-python is already the newest version (6.20251204.1). dh-python set to manually installed. libqt6core5compat6 is already the newest version (6.9.2-3). libqt6core5compat6 set to manually installed. make is already the newest version (4.4.1-3). make set to manually installed. libxml-namespacesupport-perl is already the newest version (1.12-2). libxml-namespacesupport-perl set to manually installed. libssh2-1-dev is already the newest version (1.11.1-1). libssh2-1-dev set to manually installed. libunbound8 is already the newest version (1.24.2-1). libunbound8 set to manually installed. libunistring5 is already the newest version (1.3-2). libunistring5 set to manually installed. libopengl0 is already the newest version (1.7.0-1+b2). libopengl0 set to manually installed. libtext-unidecode-perl is already the newest version (1.30-3). libtext-unidecode-perl set to manually installed. xtrans-dev is already the newest version (1.6.0-1). xtrans-dev set to manually installed. procps is already the newest version (2:4.0.4-9). procps set to manually installed. libx11-dev is already the newest version (2:1.8.12-1). libx11-dev set to manually installed. libidn2-0 is already the newest version (2.3.8-4). libidn2-0 set to manually installed. libqrupdate1 is already the newest version (1.1.5-3). libqrupdate1 set to manually installed. libkeyutils1 is already the newest version (1.6.3-6). libkeyutils1 set to manually installed. libqt6widgets6 is already the newest version (6.9.2+dfsg-3). libqt6widgets6 set to manually installed. libqt5svg5 is already the newest version (5.15.17-2). libqt5svg5 set to manually installed. libmount1 is already the newest version (2.41.3-1). libgl-dev is already the newest version (1.7.0-1+b2). libgl-dev set to manually installed. libeigen3-dev is already the newest version (3.4.0-5). libeigen3-dev set to manually installed. libgsl28 is already the newest version (2.8+dfsg-5.1). libgsl28 set to manually installed. libcurl4t64 is already the newest version (8.18.0~rc2-1). libcurl4t64 set to manually installed. libllvm19 is already the newest version (1:19.1.7-19). libllvm19 set to manually installed. libp11-kit-dev is already the newest version (0.25.10-1). libp11-kit-dev set to manually installed. libqt6gui6 is already the newest version (6.9.2+dfsg-3). libqt6gui6 set to manually installed. libgbm1 is already the newest version (25.2.8-2+b2). libgbm1 set to manually installed. libqt5opengl5-dev is already the newest version (5.15.17+dfsg-5). libqt5opengl5-dev set to manually installed. libarpack2t64 is already the newest version (3.9.1-6). libarpack2t64 set to manually installed. libmagic-mgc is already the newest version (1:5.46-5). libmagic-mgc set to manually installed. libpng16-16t64 is already the newest version (1.6.53-1). libpng16-16t64 set to manually installed. libegl-dev is already the newest version (1.7.0-1+b2). libegl-dev set to manually installed. libk5crypto3 is already the newest version (1.22.1-2). libk5crypto3 set to manually installed. libavahi-common-data is already the newest version (0.8-17). libavahi-common-data set to manually installed. libxft2 is already the newest version (2.3.6-1+b4). libxft2 set to manually installed. librtmp-dev is already the newest version (2.4+20151223.gitfa8646d.1-3). librtmp-dev set to manually installed. octave is already the newest version (10.3.0-3). octave set to manually installed. libxext6 is already the newest version (2:1.3.4-1+b3). libxext6 set to manually installed. libfftw3-single3 is already the newest version (3.3.10-2+b1). libfftw3-single3 set to manually installed. libqhull-r8.0 is already the newest version (2020.2-7). libqhull-r8.0 set to manually installed. libdb5.3t64 is already the newest version (5.3.28+dfsg2-11). libopengl-dev is already the newest version (1.7.0-1+b2). libopengl-dev set to manually installed. libqscintilla2-qt6-l10n is already the newest version (2.14.1+dfsg-2). libqscintilla2-qt6-l10n set to manually installed. gcc-15-base is already the newest version (15.2.0-11). libfltk-gl1.3t64 is already the newest version (1.3.11-3). libfltk-gl1.3t64 set to manually installed. libsmartcols1 is already the newest version (2.41.3-1). libhwy1t64 is already the newest version (1.3.0-2). libhwy1t64 set to manually installed. libjack-jackd2-0 is already the newest version (1.9.22~dfsg-5). libjack-jackd2-0 set to manually installed. libcups2t64 is already the newest version (2.4.16-1). libcups2t64 set to manually installed. libxcb-glx0 is already the newest version (1.17.0-2+b1). libxcb-glx0 set to manually installed. libintl-perl is already the newest version (1.35-1). libintl-perl set to manually installed. libjansson4 is already the newest version (2.14-2+b3). libjansson4 set to manually installed. libpam-modules-bin is already the newest version (1.7.0-5). libwacom-common is already the newest version (2.16.1-1). libwacom-common set to manually installed. libinput10 is already the newest version (1.30.0-1). libinput10 set to manually installed. netbase is already the newest version (6.5). netbase set to manually installed. libdouble-conversion3 is already the newest version (3.4.0-1). libdouble-conversion3 set to manually installed. libxau-dev is already the newest version (1:1.0.11-1). libxau-dev set to manually installed. libssl-dev is already the newest version (3.5.4-1). libssl-dev set to manually installed. libxdmcp-dev is already the newest version (1:1.1.5-1). libxdmcp-dev set to manually installed. bzip2 is already the newest version (1.0.8-6). bzip2 set to manually installed. libxshmfence1 is already the newest version (1.3.3-1). libxshmfence1 set to manually installed. libfile-stripnondeterminism-perl is already the newest version (1.15.0-1). libfile-stripnondeterminism-perl set to manually installed. libsharpyuv-dev is already the newest version (1.5.0-0.1). libsharpyuv-dev set to manually installed. libxrender1 is already the newest version (1:0.9.12-1). libxrender1 set to manually installed. libfftw3-long3 is already the newest version (3.3.10-2+b1). libfftw3-long3 set to manually installed. pkgconf is already the newest version (1.8.1-4). pkgconf set to manually installed. libmagickwand-7.q16-10 is already the newest version (8:7.1.2.8+dfsg1-1). libmagickwand-7.q16-10 set to manually installed. libhdf5-hl-fortran-310 is already the newest version (1.14.5+repack-4). libhdf5-hl-fortran-310 set to manually installed. gettext is already the newest version (0.23.2-1). gettext set to manually installed. python3.13-minimal is already the newest version (3.13.11-1+b1). python3.13-minimal set to manually installed. libsystemd0 is already the newest version (259~rc3-1). libcurl4-openssl-dev is already the newest version (8.18.0~rc2-1). libcurl4-openssl-dev set to manually installed. libpcre2-16-0 is already the newest version (10.46-1). libpcre2-16-0 set to manually installed. libhdf5-hl-cpp-310 is already the newest version (1.14.5+repack-4). libhdf5-hl-cpp-310 set to manually installed. libngtcp2-dev is already the newest version (1.16.0-1). libngtcp2-dev set to manually installed. libgsl-dev is already the newest version (2.8+dfsg-5.1). libgsl-dev set to manually installed. libgl2ps1.4 is already the newest version (1.4.2+dfsg1-4). libgl2ps1.4 set to manually installed. libtiff6 is already the newest version (4.7.1-1). libtiff6 set to manually installed. libavahi-client3 is already the newest version (0.8-17). libavahi-client3 set to manually installed. libgraphicsmagick-q16-3t64 is already the newest version (1.4+really1.3.46-2). libgraphicsmagick-q16-3t64 set to manually installed. libpkgconf3 is already the newest version (1.8.1-4). libpkgconf3 set to manually installed. libbrotli1 is already the newest version (1.1.0-2+b9). libbrotli1 set to manually installed. libdrm-intel1 is already the newest version (2.4.129-1). libdrm-intel1 set to manually installed. libarchive-zip-perl is already the newest version (1.68-1). libarchive-zip-perl set to manually installed. liblapack3 is already the newest version (3.12.1-7). liblapack3 set to manually installed. libumfpack6 is already the newest version (1:7.12.1+dfsg-1). libumfpack6 set to manually installed. libsasl2-modules-db is already the newest version (2.1.28+dfsg1-10). libsasl2-modules-db set to manually installed. libfltk1.3t64 is already the newest version (1.3.11-3). libfltk1.3t64 set to manually installed. libopus0 is already the newest version (1.5.2-2). libopus0 set to manually installed. libxml-sax-perl is already the newest version (1.02+dfsg-4). libxml-sax-perl set to manually installed. liblcms2-2 is already the newest version (2.17-1). liblcms2-2 set to manually installed. libts0t64 is already the newest version (1.22-1.1+b1). libts0t64 set to manually installed. libngtcp2-crypto-gnutls8 is already the newest version (1.16.0-1). libngtcp2-crypto-gnutls8 set to manually installed. libqt5svg5-dev is already the newest version (5.15.17-2). libqt5svg5-dev set to manually installed. python3-minimal is already the newest version (3.13.9-2). python3-minimal set to manually installed. libctf-nobfd0 is already the newest version (2.45.50.20251209-1). libctf-nobfd0 set to manually installed. libsqlite3-0 is already the newest version (3.46.1-8). libsqlite3-0 set to manually installed. libnghttp2-dev is already the newest version (1.64.0-1.1+b1). libnghttp2-dev set to manually installed. libdrm2 is already the newest version (2.4.129-1). libdrm2 set to manually installed. libcxsparse4 is already the newest version (1:7.12.1+dfsg-1). libcxsparse4 set to manually installed. libtasn1-6 is already the newest version (4.20.0-2). libtasn1-6 set to manually installed. libpython3.13-minimal is already the newest version (3.13.11-1+b1). libpython3.13-minimal set to manually installed. libgraphicsmagick++-q16-12t64 is already the newest version (1.4+really1.3.46-2). libgraphicsmagick++-q16-12t64 set to manually installed. libxau6 is already the newest version (1:1.0.11-1). libxau6 set to manually installed. fonts-dejavu-core is already the newest version (2.37-8). fonts-dejavu-core set to manually installed. libcolamd3 is already the newest version (1:7.12.1+dfsg-1). libcolamd3 set to manually installed. libccolamd3 is already the newest version (1:7.12.1+dfsg-1). libccolamd3 set to manually installed. libgfortran5 is already the newest version (15.2.0-11). libgfortran5 set to manually installed. dwz is already the newest version (0.16-2). dwz set to manually installed. libhwasan0 is already the newest version (15.2.0-11). libhwasan0 set to manually installed. libbinutils is already the newest version (2.45.50.20251209-1). libbinutils set to manually installed. liblzma5 is already the newest version (5.8.1-2). libglx0 is already the newest version (1.7.0-1+b2). libglx0 set to manually installed. libngtcp2-crypto-ossl-dev is already the newest version (1.16.0-1). libngtcp2-crypto-ossl-dev set to manually installed. libreadline8t64 is already the newest version (8.3-3). libreadline8t64 set to manually installed. libcamd3 is already the newest version (1:7.12.1+dfsg-1). libcamd3 set to manually installed. libkadm5clnt-mit12 is already the newest version (1.22.1-2). libkadm5clnt-mit12 set to manually installed. qtchooser is already the newest version (66-2). qtchooser set to manually installed. libdbus-1-3 is already the newest version (1.16.2-2). libdbus-1-3 set to manually installed. libgnutls-dane0t64 is already the newest version (3.8.11-3). libgnutls-dane0t64 set to manually installed. libhdf5-hl-310 is already the newest version (1.14.5+repack-4). libhdf5-hl-310 set to manually installed. libncursesw6 is already the newest version (6.5+20251123-1). libncursesw6 set to manually installed. sensible-utils is already the newest version (0.0.26). sensible-utils set to manually installed. hicolor-icon-theme is already the newest version (0.18-2). hicolor-icon-theme set to manually installed. patch is already the newest version (2.8-2). patch set to manually installed. mawk is already the newest version (1.3.4.20250131-1). perl-modules-5.40 is already the newest version (5.40.1-7). perl-modules-5.40 set to manually installed. groff-base is already the newest version (1.23.0-10). groff-base set to manually installed. libseccomp2 is already the newest version (2.6.0-2+b1). libseccomp2 set to manually installed. libsm6 is already the newest version (2:1.2.6-1). libsm6 set to manually installed. libbrotli-dev is already the newest version (1.1.0-2+b9). libbrotli-dev set to manually installed. libqt6help6 is already the newest version (6.9.2-3). libqt6help6 set to manually installed. libgfortran-15-dev is already the newest version (15.2.0-11). libgfortran-15-dev set to manually installed. libgmp10 is already the newest version (2:6.3.0+dfsg-5). libasan8 is already the newest version (15.2.0-11). libasan8 set to manually installed. libdrm-common is already the newest version (2.4.129-1). libdrm-common set to manually installed. libopenjp2-7 is already the newest version (2.5.3-2.1). libopenjp2-7 set to manually installed. ncurses-bin is already the newest version (6.5+20251123-1). libtext-charwidth-perl is already the newest version (0.04-11+b4). libtext-charwidth-perl set to manually installed. xorg-sgml-doctools is already the newest version (1:1.11-1.1). xorg-sgml-doctools set to manually installed. libcholmod5 is already the newest version (1:7.12.1+dfsg-1). libcholmod5 set to manually installed. util-linux is already the newest version (2.41.3-1). libxml2-16 is already the newest version (2.15.1+dfsg-2+b1). libxml2-16 set to manually installed. liblqr-1-0 is already the newest version (0.4.2-2.1+b2). liblqr-1-0 set to manually installed. texinfo-lib is already the newest version (7.2-5). texinfo-lib set to manually installed. libtiffxx6 is already the newest version (4.7.1-1). libtiffxx6 set to manually installed. cpp-15-x86-64-linux-gnu is already the newest version (15.2.0-11). cpp-15-x86-64-linux-gnu set to manually installed. libportaudio2 is already the newest version (19.7.0-1). libportaudio2 set to manually installed. libaec-dev is already the newest version (1.1.4-2). libaec-dev set to manually installed. libz3-4 is already the newest version (4.13.3-1). libz3-4 set to manually installed. libvulkan1 is already the newest version (1.4.328.1-1). libvulkan1 set to manually installed. libbz2-1.0 is already the newest version (1.0.8-6). libngtcp2-16 is already the newest version (1.16.0-1). libngtcp2-16 set to manually installed. libmpfr6 is already the newest version (4.2.2-2). libmpfr6 set to manually installed. rpcsvc-proto is already the newest version (1.4.3-1). rpcsvc-proto set to manually installed. libxcb1-dev is already the newest version (1.17.0-2+b1). libxcb1-dev set to manually installed. libsuitesparseconfig7 is already the newest version (1:7.12.1+dfsg-1). libsuitesparseconfig7 set to manually installed. matlab-support-dev is already the newest version (0.3). matlab-support-dev set to manually installed. libtext-wrapi18n-perl is already the newest version (0.06-10). libtext-wrapi18n-perl set to manually installed. dpkg is already the newest version (1.22.21). libelf1t64 is already the newest version (0.194-1). libelf1t64 set to manually installed. fontconfig is already the newest version (2.15.0-2.4). fontconfig set to manually installed. imagemagick-7.q16 is already the newest version (8:7.1.2.8+dfsg1-1). imagemagick-7.q16 set to manually installed. libqt6network6 is already the newest version (6.9.2+dfsg-3). libqt6network6 set to manually installed. libhdf5-fortran-310 is already the newest version (1.14.5+repack-4). libhdf5-fortran-310 set to manually installed. x11proto-dev is already the newest version (2024.1-1). x11proto-dev set to manually installed. libzstd1 is already the newest version (1.5.7+dfsg-2). libsndfile1 is already the newest version (1.2.2-3). libsndfile1 set to manually installed. libkrb5-3 is already the newest version (1.22.1-2). libkrb5-3 set to manually installed. libqt5sql5t64 is already the newest version (5.15.17+dfsg-5). libqt5sql5t64 set to manually installed. libx11-data is already the newest version (2:1.8.12-1). libx11-data set to manually installed. libselinux1 is already the newest version (3.9-4+b1). findutils is already the newest version (4.10.0-3). qt5-qmake is already the newest version (5.15.17+dfsg-5). qt5-qmake set to manually installed. libwebpdecoder3 is already the newest version (1.5.0-0.1). libwebpdecoder3 set to manually installed. libqt5opengl5t64 is already the newest version (5.15.17+dfsg-5). libqt5opengl5t64 set to manually installed. libxinerama1 is already the newest version (2:1.1.4-3+b4). libxinerama1 set to manually installed. libpython3-stdlib is already the newest version (3.13.9-2). libpython3-stdlib set to manually installed. libnghttp3-dev is already the newest version (1.12.0-1). libnghttp3-dev set to manually installed. libqt5dbus5t64 is already the newest version (5.15.17+dfsg-5). libqt5dbus5t64 set to manually installed. libqscintilla2-qt6-15 is already the newest version (2.14.1+dfsg-2). libqscintilla2-qt6-15 set to manually installed. hdf5-helpers is already the newest version (1.14.5+repack-4). hdf5-helpers set to manually installed. gfortran-15 is already the newest version (15.2.0-11). gfortran-15 set to manually installed. libxcb-xinerama0 is already the newest version (1.17.0-2+b1). libxcb-xinerama0 set to manually installed. libevdev2 is already the newest version (1.13.6+dfsg-1). libevdev2 set to manually installed. libtool is already the newest version (2.5.4-9). libtool set to manually installed. libwmflite-0.2-7 is already the newest version (0.2.13-2). libwmflite-0.2-7 set to manually installed. libpcre2-8-0 is already the newest version (10.46-1). libgslcblas0 is already the newest version (2.8+dfsg-5.1). libgslcblas0 set to manually installed. libcc1-0 is already the newest version (15.2.0-11). libcc1-0 set to manually installed. libgdbm-compat4t64 is already the newest version (1.26-1). libgdbm-compat4t64 set to manually installed. libxcb1 is already the newest version (1.17.0-2+b1). libxcb1 set to manually installed. libglib2.0-0t64 is already the newest version (2.86.3-1). libglib2.0-0t64 set to manually installed. libdpkg-perl is already the newest version (1.22.21). libdpkg-perl set to manually installed. tar is already the newest version (1.35+dfsg-3.1). libc6-dev is already the newest version (2.42-6). libc6-dev set to manually installed. libnghttp2-14 is already the newest version (1.64.0-1.1+b1). libnghttp2-14 set to manually installed. libflac14 is already the newest version (1.5.0+ds-5). libflac14 set to manually installed. libp11-kit0 is already the newest version (0.25.10-1). libp11-kit0 set to manually installed. media-types is already the newest version (14.0.0). media-types set to manually installed. gfortran-x86-64-linux-gnu is already the newest version (4:15.2.0-4). gfortran-x86-64-linux-gnu set to manually installed. liblzma-dev is already the newest version (5.8.1-2). liblzma-dev set to manually installed. gcc-15 is already the newest version (15.2.0-11). gcc-15 set to manually installed. libxkbcommon0 is already the newest version (1.12.3-1). libxkbcommon0 set to manually installed. octave-common is already the newest version (10.3.0-3). octave-common set to manually installed. libevent-2.1-7t64 is already the newest version (2.1.12-stable-10+b1). libevent-2.1-7t64 set to manually installed. libldap2 is already the newest version (2.6.10+dfsg-1). libldap2 set to manually installed. libwayland-client0 is already the newest version (1.24.0-2+b1). libwayland-client0 set to manually installed. libcrypt1 is already the newest version (1:4.5.1-1). dash is already the newest version (0.5.12-12). bsdextrautils is already the newest version (2.41.3-1). bsdextrautils set to manually installed. libblkid1 is already the newest version (2.41.3-1). libgssrpc4t64 is already the newest version (1.22.1-2). libgssrpc4t64 set to manually installed. libpsl5t64 is already the newest version (0.21.2-1.1+b1). libpsl5t64 set to manually installed. libreadline-dev is already the newest version (8.3-3). libreadline-dev set to manually installed. readline-common is already the newest version (8.3-3). readline-common set to manually installed. cpp-15 is already the newest version (15.2.0-11). cpp-15 set to manually installed. libsframe2 is already the newest version (2.45.50.20251209-1). libsframe2 set to manually installed. diffutils is already the newest version (1:3.12-1). gcc is already the newest version (4:15.2.0-4). gcc set to manually installed. autoconf is already the newest version (2.72-3.1). autoconf set to manually installed. libheif1 is already the newest version (1.20.2-2+b4). libheif1 set to manually installed. libffi8 is already the newest version (3.5.2-3). libffi8 set to manually installed. libjbig-dev is already the newest version (2.1-6.1+b2). libjbig-dev set to manually installed. libxcb-icccm4 is already the newest version (0.4.2-1). libxcb-icccm4 set to manually installed. libaudit1 is already the newest version (1:4.1.2-1+b1). libsharpyuv0 is already the newest version (1.5.0-0.1). libsharpyuv0 set to manually installed. libgcc-s1 is already the newest version (15.2.0-11). libxcb-util1 is already the newest version (0.4.1-1). libxcb-util1 set to manually installed. hostname is already the newest version (3.25). libqt5test5t64 is already the newest version (5.15.17+dfsg-5). libqt5test5t64 set to manually installed. base-passwd is already the newest version (3.6.8). libxcb-shape0 is already the newest version (1.17.0-2+b1). libxcb-shape0 set to manually installed. libpipeline1 is already the newest version (1.5.8-2). libpipeline1 set to manually installed. python3.13 is already the newest version (3.13.11-1+b1). python3.13 set to manually installed. x11-common is already the newest version (1:7.7+26). x11-common set to manually installed. ucf is already the newest version (3.0052). ucf set to manually installed. libkadm5srv-mit12 is already the newest version (1.22.1-2). libkadm5srv-mit12 set to manually installed. libaudit-common is already the newest version (1:4.1.2-1). liblapack-dev is already the newest version (3.12.1-7). liblapack-dev set to manually installed. libxkbcommon-x11-0 is already the newest version (1.12.3-1). libxkbcommon-x11-0 set to manually installed. gzip is already the newest version (1.13-1). libqt6core6t64 is already the newest version (6.9.2+dfsg-3). libqt6core6t64 set to manually installed. g++-15 is already the newest version (15.2.0-11). g++-15 set to manually installed. libitm1 is already the newest version (15.2.0-11). libitm1 set to manually installed. libc-gconv-modules-extra is already the newest version (2.42-6). bc is already the newest version (1.07.1-4). bc set to manually installed. libglu1-mesa-dev is already the newest version (9.0.2-1.1+b3). libglu1-mesa-dev set to manually installed. libgnutls28-dev is already the newest version (3.8.11-3). libgnutls28-dev set to manually installed. libnghttp3-9 is already the newest version (1.12.0-1). libnghttp3-9 set to manually installed. tzdata is already the newest version (2025c-2). tzdata set to manually installed. libdebhelper-perl is already the newest version (13.29). libdebhelper-perl set to manually installed. qt5-qmake-bin is already the newest version (5.15.17+dfsg-5). qt5-qmake-bin set to manually installed. libatomic1 is already the newest version (15.2.0-11). libatomic1 set to manually installed. imagemagick is already the newest version (8:7.1.2.8+dfsg1-1). imagemagick set to manually installed. init-system-helpers is already the newest version (1.69). libc-bin is already the newest version (2.42-6). libfontconfig1 is already the newest version (2.15.0-2.4). libfontconfig1 set to manually installed. libgl1 is already the newest version (1.7.0-1+b2). libgl1 set to manually installed. libtiff-dev is already the newest version (4.7.1-1). libtiff-dev set to manually installed. libcurl3t64-gnutls is already the newest version (8.18.0~rc2-1). libcurl3t64-gnutls set to manually installed. cpp is already the newest version (4:15.2.0-4). cpp set to manually installed. gfortran-15-x86-64-linux-gnu is already the newest version (15.2.0-11). gfortran-15-x86-64-linux-gnu set to manually installed. libxcb-image0 is already the newest version (0.4.0-2+b2). libxcb-image0 set to manually installed. libegl-mesa0 is already the newest version (25.2.8-2+b2). libegl-mesa0 set to manually installed. libxcb-randr0 is already the newest version (1.17.0-2+b1). libxcb-randr0 set to manually installed. libxcb-keysyms1 is already the newest version (0.4.1-1). libxcb-keysyms1 set to manually installed. libgnutls-openssl27t64 is already the newest version (3.8.11-3). libgnutls-openssl27t64 set to manually installed. libdav1d7 is already the newest version (1.5.2-1). libdav1d7 set to manually installed. autopoint is already the newest version (0.23.2-1). autopoint set to manually installed. libnettle8t64 is already the newest version (3.10.2-1). libnettle8t64 set to manually installed. libkrb5support0 is already the newest version (1.22.1-2). libkrb5support0 set to manually installed. m4 is already the newest version (1.4.20-2). m4 set to manually installed. libgl1-mesa-dri is already the newest version (25.2.8-2+b2). libgl1-mesa-dri set to manually installed. libvorbis0a is already the newest version (1.3.7-3). libvorbis0a set to manually installed. libglvnd0 is already the newest version (1.7.0-1+b2). libglvnd0 set to manually installed. libfreetype6 is already the newest version (2.13.3+dfsg-1). libfreetype6 set to manually installed. liblerc4 is already the newest version (4.0.0+ds-5). liblerc4 set to manually installed. automake is already the newest version (1:1.18.1-3). automake set to manually installed. base-files is already the newest version (14). libexpat1 is already the newest version (2.7.3-1). libexpat1 set to manually installed. liblerc-dev is already the newest version (4.0.0+ds-5). liblerc-dev set to manually installed. libxcb-sync1 is already the newest version (1.17.0-2+b1). libxcb-sync1 set to manually installed. binutils-common is already the newest version (2.45.50.20251209-1). binutils-common set to manually installed. libhdf5-cpp-310 is already the newest version (1.14.5+repack-4). libhdf5-cpp-310 set to manually installed. libxdmcp6 is already the newest version (1:1.1.5-1). libxdmcp6 set to manually installed. debhelper is already the newest version (13.29). debhelper set to manually installed. debconf is already the newest version (1.5.91). linux-libc-dev is already the newest version (6.17.11-1). linux-libc-dev set to manually installed. libsasl2-2 is already the newest version (2.1.28+dfsg1-10). libsasl2-2 set to manually installed. libmpg123-0t64 is already the newest version (1.33.3-1). libmpg123-0t64 set to manually installed. libpam-runtime is already the newest version (1.7.0-5). libjpeg-dev is already the newest version (1:2.1.5-4). libjpeg-dev set to manually installed. libproc2-0 is already the newest version (2:4.0.4-9). libproc2-0 set to manually installed. openssl-provider-legacy is already the newest version (3.5.4-1). libcom-err2 is already the newest version (1.47.2-3+b4). libcom-err2 set to manually installed. libwebp7 is already the newest version (1.5.0-0.1). libwebp7 set to manually installed. libqt5core5t64 is already the newest version (5.15.17+dfsg-5). libqt5core5t64 set to manually installed. libglx-mesa0 is already the newest version (25.2.8-2+b2). libglx-mesa0 set to manually installed. g++-15-x86-64-linux-gnu is already the newest version (15.2.0-11). g++-15-x86-64-linux-gnu set to manually installed. libqt5printsupport5t64 is already the newest version (5.15.17+dfsg-5). libqt5printsupport5t64 set to manually installed. libc6 is already the newest version (2.42-6). libxext-dev is already the newest version (2:1.3.4-1+b3). libxext-dev set to manually installed. shared-mime-info is already the newest version (2.4-5+b3). shared-mime-info set to manually installed. libqt6dbus6 is already the newest version (6.9.2+dfsg-3). libqt6dbus6 set to manually installed. libglx-dev is already the newest version (1.7.0-1+b2). libglx-dev set to manually installed. libaec0 is already the newest version (1.1.4-2). libaec0 set to manually installed. libvulkan-dev is already the newest version (1.4.328.1-1). libvulkan-dev set to manually installed. libx11-6 is already the newest version (2:1.8.12-1). libx11-6 set to manually installed. libgssapi-krb5-2 is already the newest version (1.22.1-2). libgssapi-krb5-2 set to manually installed. libblas-dev is already the newest version (3.12.1-7). libblas-dev set to manually installed. libgomp1 is already the newest version (15.2.0-11). libgomp1 set to manually installed. libpsl-dev is already the newest version (0.21.2-1.1+b1). libpsl-dev set to manually installed. libasound2-data is already the newest version (1.2.15-2). libasound2-data set to manually installed. dh-autoreconf is already the newest version (21). dh-autoreconf set to manually installed. libqt5concurrent5t64 is already the newest version (5.15.17+dfsg-5). libqt5concurrent5t64 set to manually installed. libattr1 is already the newest version (1:2.5.2-3). libwacom9 is already the newest version (2.16.1-1). libwacom9 set to manually installed. libavahi-common3 is already the newest version (0.8-17). libavahi-common3 set to manually installed. libtinfo6 is already the newest version (6.5+20251123-1). libblas3 is already the newest version (3.12.1-7). libblas3 set to manually installed. debianutils is already the newest version (5.23.2). octave-dev is already the newest version (10.3.0-3). octave-dev set to manually installed. qtbase5-dev is already the newest version (5.15.17+dfsg-5). qtbase5-dev set to manually installed. libdebconfclient0 is already the newest version (0.282+b2). zlib1g-dev is already the newest version (1:1.3.dfsg+really1.3.1-1+b2). zlib1g-dev set to manually installed. libqt6printsupport6 is already the newest version (6.9.2+dfsg-3). libqt6printsupport6 set to manually installed. libqt5widgets5t64 is already the newest version (5.15.17+dfsg-5). libqt5widgets5t64 set to manually installed. libkrb5-dev is already the newest version (1.22.1-2). libkrb5-dev set to manually installed. libqt6openglwidgets6 is already the newest version (6.9.2+dfsg-3). libqt6openglwidgets6 set to manually installed. coreutils is already the newest version (9.7-3). libglu1-mesa is already the newest version (9.0.2-1.1+b3). libglu1-mesa set to manually installed. libquadmath0 is already the newest version (15.2.0-11). libquadmath0 set to manually installed. libjbig0 is already the newest version (2.1-6.1+b2). libjbig0 set to manually installed. libraw23t64 is already the newest version (0.21.4-2). libraw23t64 set to manually installed. libqt5gui5t64 is already the newest version (5.15.17+dfsg-5). libqt5gui5t64 set to manually installed. libxcb-render0 is already the newest version (1.17.0-2+b1). libxcb-render0 set to manually installed. man-db is already the newest version (2.13.1-1). man-db set to manually installed. grep is already the newest version (3.12-1). libice6 is already the newest version (2:1.1.1-1). libice6 set to manually installed. libstdc++-15-dev is already the newest version (15.2.0-11). libstdc++-15-dev set to manually installed. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: running --customize-hook in shell: sh -c 'chroot "$1" dpkg -r debootsnap-dummy' exec /srv/rebuilderd/tmp/mmdebstrap.XudXAEwM3O (Reading database ... 30029 files and directories currently installed.) Removing debootsnap-dummy (1.0) ... I: running --customize-hook in shell: sh -c 'chroot "$1" dpkg-query --showformat '${binary:Package}=${Version}\n' --show > "$1/pkglist"' exec /srv/rebuilderd/tmp/mmdebstrap.XudXAEwM3O I: running special hook: download /pkglist ./pkglist I: running --customize-hook in shell: sh -c 'rm "$1/pkglist"' exec /srv/rebuilderd/tmp/mmdebstrap.XudXAEwM3O I: running special hook: upload sources.list /etc/apt/sources.list I: waiting for background processes to finish... I: cleaning package lists and apt cache... I: skipping cleanup/reproducible as requested I: creating tarball... I: done I: removing tempdir /srv/rebuilderd/tmp/mmdebstrap.XudXAEwM3O... I: success in 601.6141 seconds Downloading dependency 383 of 481: libqt6core6t64:amd64=6.9.2+dfsg-3 Downloading dependency 384 of 481: g++-15:amd64=15.2.0-11 Downloading dependency 385 of 481: libitm1:amd64=15.2.0-11 Downloading dependency 386 of 481: libc-gconv-modules-extra:amd64=2.42-6 Downloading dependency 387 of 481: bc:amd64=1.07.1-4 Downloading dependency 388 of 481: libglu1-mesa-dev:amd64=9.0.2-1.1+b3 Downloading dependency 389 of 481: libgnutls28-dev:amd64=3.8.11-3 Downloading dependency 390 of 481: libnghttp3-9:amd64=1.12.0-1 Downloading dependency 391 of 481: tzdata:amd64=2025c-2 Downloading dependency 392 of 481: libdebhelper-perl:amd64=13.29 Downloading dependency 393 of 481: qt5-qmake-bin:amd64=5.15.17+dfsg-5 Downloading dependency 394 of 481: libatomic1:amd64=15.2.0-11 Downloading dependency 395 of 481: imagemagick:amd64=8:7.1.2.8+dfsg1-1 Downloading dependency 396 of 481: init-system-helpers:amd64=1.69 Downloading dependency 397 of 481: libc-bin:amd64=2.42-6 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--verbose --nolog --bd-uninstallable-explainer= --build-path=/build/reproducible-path --dsc-dir=mrtrix3-3.0.8 /srv/rebuilderd/tmp/rebuilderdyDrFbZ/inputs/mrtrix3_3.0.8-1.dsc I: consider moving your ~/.sbuildrc to /srv/rebuilderd/.config/sbuild/config.pl The Debian buildds switched to the "unshare" backend and sbuild will default to it in the future. To start using "unshare" add this to your `~/.config/sbuild/config.pl`: $chroot_mode = "unshare"; If you want to keep the old "schroot" mode even in the future, add the following to your `~/.config/sbuild/config.pl`: $chroot_mode = "schroot"; $schroot = "schroot"; sbuild (Debian sbuild) 0.89.3+deb13u1 (16 August 2025) on osuosl42-amd64.novalocal +==============================================================================+ | mrtrix3 3.0.8-1 (amd64) Wed, 17 Dec 2025 21:31:42 +0000 | +==============================================================================+ Package: mrtrix3 Version: 3.0.8-1 Source Version: 3.0.8-1 Distribution: unstable Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 Build Type: any I: No tarballs found in /srv/rebuilderd/.cache/sbuild I: Unpacking /srv/rebuilderd/tmp/debrebuildqbMbmT/debrebuild.tar.QZEnHyv11qST to /srv/rebuilderd/tmp/tmp.sbuild.CaKCT8ZQ0a... I: Setting up the chroot... I: Creating chroot session... I: Setting up log color... I: Setting up apt archive... +------------------------------------------------------------------------------+ | Fetch source files Wed, 17 Dec 2025 21:33:02 +0000 | +------------------------------------------------------------------------------+ Local sources ------------- /srv/rebuilderd/tmp/rebuilderdyDrFbZ/inputs/mrtrix3_3.0.8-1.dsc exists in /srv/rebuilderd/tmp/rebuilderdyDrFbZ/inputs; copying to chroot +------------------------------------------------------------------------------+ | Install package build dependencies Wed, 17 Dec 2025 21:33:04 +0000 | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), dh-python, octave-dev, libgsl-dev, libeigen3-dev, libqt5opengl5-dev, qtbase5-dev, libqt5svg5-dev, python3, pkgconf, imagemagick, libtiff-dev, matlab-support-dev, bc, build-essential Merged Build-Conflicts: clang Filtered Build-Depends: debhelper-compat (= 13), dh-python, octave-dev, libgsl-dev, libeigen3-dev, libqt5opengl5-dev, qtbase5-dev, libqt5svg5-dev, python3, pkgconf, imagemagick, libtiff-dev, matlab-support-dev, bc, build-essential Filtered Build-Conflicts: clang dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/build/reproducible-path/resolver-dlzhlQ/apt_archive/sbuild-build-depends-main-dummy.deb'. Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies +------------------------------------------------------------------------------+ | Check architectures Wed, 17 Dec 2025 21:33:09 +0000 | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in any-amd64 arm64 all) +------------------------------------------------------------------------------+ | Build environment Wed, 17 Dec 2025 21:33:09 +0000 | +------------------------------------------------------------------------------+ Kernel: Linux 6.12.57+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.57-1 (2025-11-05) amd64 (x86_64) Toolchain package versions: binutils_2.45.50.20251209-1 dpkg-dev_1.22.21 g++-15_15.2.0-11 gcc-15_15.2.0-11 libc6-dev_2.42-6 libstdc++-15-dev_15.2.0-11 libstdc++6_15.2.0-11 linux-libc-dev_6.17.11-1 Package versions: autoconf_2.72-3.1 automake_1:1.18.1-3 autopoint_0.23.2-1 autotools-dev_20240727.1 base-files_14 base-passwd_3.6.8 bash_5.3-1 bc_1.07.1-4 binutils_2.45.50.20251209-1 binutils-common_2.45.50.20251209-1 binutils-x86-64-linux-gnu_2.45.50.20251209-1 bsdextrautils_2.41.3-1 build-essential_12.12 bzip2_1.0.8-6 comerr-dev_2.1-1.47.2-3+b4 coreutils_9.7-3 cpp_4:15.2.0-4 cpp-15_15.2.0-11 cpp-15-x86-64-linux-gnu_15.2.0-11 cpp-x86-64-linux-gnu_4:15.2.0-4 dash_0.5.12-12 debconf_1.5.91 debhelper_13.29 debianutils_5.23.2 dh-autoreconf_21 dh-python_6.20251204.1 dh-strip-nondeterminism_1.15.0-1 diffutils_1:3.12-1 dpkg_1.22.21 dpkg-dev_1.22.21 dwz_0.16-2 file_1:5.46-5 findutils_4.10.0-3 fontconfig_2.15.0-2.4 fontconfig-config_2.15.0-2.4 fonts-dejavu-core_2.37-8 fonts-dejavu-mono_2.37-8 g++_4:15.2.0-4 g++-15_15.2.0-11 g++-15-x86-64-linux-gnu_15.2.0-11 g++-x86-64-linux-gnu_4:15.2.0-4 gcc_4:15.2.0-4 gcc-15_15.2.0-11 gcc-15-base_15.2.0-11 gcc-15-x86-64-linux-gnu_15.2.0-11 gcc-x86-64-linux-gnu_4:15.2.0-4 gettext_0.23.2-1 gettext-base_0.23.2-1 gfortran_4:15.2.0-4 gfortran-15_15.2.0-11 gfortran-15-x86-64-linux-gnu_15.2.0-11 gfortran-x86-64-linux-gnu_4:15.2.0-4 grep_3.12-1 groff-base_1.23.0-10 gzip_1.13-1 hdf5-helpers_1.14.5+repack-4 hicolor-icon-theme_0.18-2 hostname_3.25 imagemagick_8:7.1.2.8+dfsg1-1 imagemagick-7-common_8:7.1.2.8+dfsg1-1 imagemagick-7.q16_8:7.1.2.8+dfsg1-1 init-system-helpers_1.69 intltool-debian_0.35.0+20060710.6 krb5-multidev_1.22.1-2 libacl1_2.3.2-2+b1 libaec-dev_1.1.4-2 libaec0_1.1.4-2 libamd3_1:7.12.1+dfsg-1 libarchive-zip-perl_1.68-1 libarpack2t64_3.9.1-6 libasan8_15.2.0-11 libasound2-data_1.2.15-2 libasound2t64_1.2.15-2 libatomic1_15.2.0-11 libattr1_1:2.5.2-3 libaudit-common_1:4.1.2-1 libaudit1_1:4.1.2-1+b1 libavahi-client3_0.8-17 libavahi-common-data_0.8-17 libavahi-common3_0.8-17 libb2-1_0.98.1-1.1+b2 libbinutils_2.45.50.20251209-1 libblas-dev_3.12.1-7 libblas3_3.12.1-7 libblkid1_2.41.3-1 libbrotli-dev_1.1.0-2+b9 libbrotli1_1.1.0-2+b9 libbsd0_0.12.2-2 libbz2-1.0_1.0.8-6 libc-bin_2.42-6 libc-dev-bin_2.42-6 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python3.13-minimal_3.13.11-1+b1 qt5-qmake_5.15.17+dfsg-5 qt5-qmake-bin_5.15.17+dfsg-5 qtbase5-dev_5.15.17+dfsg-5 qtbase5-dev-tools_5.15.17+dfsg-5 qtchooser_66-2 readline-common_8.3-3 rpcsvc-proto_1.4.3-1 sed_4.9-2 sensible-utils_0.0.26 shared-mime-info_2.4-5+b3 sysvinit-utils_3.15-6 tar_1.35+dfsg-3.1 tex-common_6.20 texinfo_7.2-5 texinfo-lib_7.2-5 tzdata_2025c-2 ucf_3.0052 util-linux_2.41.3-1 x11-common_1:7.7+26 x11proto-dev_2024.1-1 xkb-data_2.46-1 xorg-sgml-doctools_1:1.11-1.1 xtrans-dev_1.6.0-1 xz-utils_5.8.1-2 zlib1g_1:1.3.dfsg+really1.3.1-1+b2 zlib1g-dev_1:1.3.dfsg+really1.3.1-1+b2 +------------------------------------------------------------------------------+ | Build Wed, 17 Dec 2025 21:33:09 +0000 | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: mrtrix3 Binary: mrtrix3, mrtrix3-doc Architecture: any-amd64 arm64 all Version: 3.0.8-1 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dpkg-source: warning: cannot verify inline signature for ./mrtrix3_3.0.8-1.dsc: unsupported subcommand dpkg-source: info: extracting mrtrix3 in /build/reproducible-path/mrtrix3-3.0.8 dpkg-source: info: unpacking mrtrix3_3.0.8.orig.tar.gz dpkg-source: info: unpacking mrtrix3_3.0.8-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying debian_build_cfg dpkg-source: info: applying python3.patch dpkg-source: info: applying mrtrix_version.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=6 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LC_COLLATE=C.UTF-8 LC_CTYPE=C.UTF-8 LOGNAME=sbuild PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SHELL=/bin/sh SOURCE_DATE_EPOCH=1765979088 USER=sbuild dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -us -uc -B dpkg-buildpackage: info: source package mrtrix3 dpkg-buildpackage: info: source version 3.0.8-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean debian/rules override_dh_clean make[1]: Entering directory '/build/reproducible-path/mrtrix3-3.0.8' [ -f config ] && python3 ./build clean || true find . -name '*.pyc' -delete rm clean \ config configure.log build.log \ core/version.cpp lib/mrtrix3/_version.py src/exec_version.cpp \ icons/mrview.qrc icons/shview.qrc rm: cannot remove 'clean': No such file or directory rm: cannot remove 'config': No such file or directory rm: cannot remove 'configure.log': No such file or directory rm: cannot remove 'build.log': No such file or directory rm: cannot remove 'core/version.cpp': No such file or directory rm: cannot remove 'lib/mrtrix3/_version.py': No such file or directory rm: cannot remove 'src/exec_version.cpp': No such file or directory rm: cannot remove 'icons/mrview.qrc': No such file or directory rm: cannot remove 'icons/shview.qrc': No such file or directory make[1]: [debian/rules:76: override_dh_clean] Error 1 (ignored) dh_clean make[1]: Leaving directory '/build/reproducible-path/mrtrix3-3.0.8' debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/mrtrix3-3.0.8' ./configure -openmp # -debug MRtrix build type requested: release version with openmp Detecting OS: linux Looking for compiler [clang++]: not found Looking for compiler [g++]: g++ (Debian 15.2.0-11) 15.2.0 Checking for C++11 compliance: ok Checking shared library generation: ok Detecting pointer size: 64 bit Detecting byte order: little-endian Checking for variable-length array support: ok Checking for non-POD variable-length array support: ok Checking for ::max_align_t: 16 bytes Checking for std::max_align_t: 16 bytes Checking for Eigen3 library: 3.4.0 Checking for Eigen3 Unsupported: Present Checking for zlib compression library: 1.3.1 Checking for "JSON for Modern C++" requirements: ok Checking for TIFF library: LIBTIFF, Version 4.7.1 Checking for PNG library: not found - PNG support disabled Checking for FFTW library: fftw-3.3.10-sse2-avx Checking for OpenMP support: ok Checking for Qt moc: moc (version 5.15.17) Checking for Qt qmake: qmake (version 5.15.17) Checking for Qt rcc: rcc (version 5.15.17) Checking for Qt: 5.15.17 writing configuration to file './config': ok make[1]: Leaving directory '/build/reproducible-path/mrtrix3-3.0.8' debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/mrtrix3-3.0.8' ./build -verbose active config is default reading configuration from "config"... is_likely_text: bin/5ttgen: starts with shebang is_likely_text: bin/blend: starts with shebang is_likely_text: bin/convert_bruker: starts with shebang is_likely_text: bin/dwi2response: starts with shebang is_likely_text: bin/dwibiascorrect: starts with shebang is_likely_text: bin/dwicat: starts with shebang is_likely_text: bin/dwifslpreproc: starts with shebang is_likely_text: bin/dwigradcheck: starts with shebang is_likely_text: bin/dwinormalise: starts with shebang is_likely_text: bin/dwishellmath: starts with shebang is_likely_text: bin/for_each: starts with shebang is_likely_text: bin/gen_scheme: starts with shebang is_likely_text: bin/labelsgmfix: starts with shebang is_likely_text: bin/mrtrix3.py: utf-8 encoded is_likely_text: bin/mrtrix_cleanup: starts with shebang is_likely_text: bin/notfound: starts with shebang is_likely_text: bin/population_template: starts with shebang is_likely_text: bin/responsemean: starts with shebang getting MRtrix version from folder "."... fetching version information from "MRTRIX_BASE_VERSION" in "./core/version.h": 3.0.8 Using MRtrix version "3.0.8" version file "./core/version.cpp" is out of date - updating version file "./src/exec_version.cpp" is out of date - updating compiling TODO list... building targets: bin/mredit bin/tck2connectome bin/tensor2metric bin/5ttcheck bin/dirorder bin/sh2amp bin/fod2dec bin/sh2power bin/shbasis bin/mrstats bin/tcktransform bin/tckgen bin/fixelcrop bin/mesh2voxel bin/mrhistmatch bin/dwi2adc bin/sh2peaks bin/voxel2mesh bin/tsfsmooth bin/tcksift bin/mrthreshold bin/shview bin/tcksample bin/maskdump bin/warpconvert bin/vectorstats bin/fixel2peaks bin/mrdegibbs bin/mrcalc bin/dwi2mask bin/peaks2amp bin/mrregister bin/mrview bin/transformcompose bin/fixelcfestats bin/mraverageheader bin/tckdfc bin/meshfilter bin/mrcheckerboardmask bin/fixelconvert bin/transformconvert bin/dwiextract bin/mrfilter bin/mrclusterstats bin/fixel2sh bin/connectomeedit bin/mrconvert bin/mrmath bin/fod2fixel bin/tsfmult bin/warpcorrect bin/warpinvert bin/mrdump bin/dcminfo bin/mrmetric bin/afdconnectivity bin/dirgen bin/tckglobal bin/dwi2fod bin/tckedit bin/label2colour bin/voxel2fixel bin/dirflip bin/tsfvalidate bin/warp2metric bin/fixel2voxel bin/meshconvert bin/tsfinfo bin/peaks2fixel bin/warpinit bin/fixel2tsf bin/mrgrid bin/sh2response bin/dirstat bin/mrcolour bin/tcksift2 bin/mrtransform bin/tckresample bin/dirsplit bin/connectomestats bin/transformcalc bin/mrcentroid bin/dwi2tensor bin/fixelreorient bin/labelstats bin/5tt2vis bin/fixelcorrespondence bin/tsfthreshold bin/tckmap bin/labelconvert bin/shconv bin/fixelconnectivity bin/amp2sh bin/tckstats bin/tck2fixel bin/mrhistogram bin/maskfilter bin/5ttedit bin/fixelfilter bin/dcmedit bin/tsfdivide bin/tckinfo bin/mrcat bin/connectome2tck bin/mtnormalise bin/5tt2gmwmi bin/dwidenoise bin/mrinfo bin/label2mesh bin/tckconvert bin/dirmerge bin/amp2response TODO list contains 548 items Build will use 4 threads ( 1/548) [CC] tmp/cmd/mredit.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mredit.cpp -o tmp/cmd/mredit.o ( 3/548) [CC] tmp/src/exec_version.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/exec_version.cpp -o tmp/src/exec_version.o ( 4/548) [CC] tmp/core/signal_handler.o ( 2/548) [CC] tmp/core/math/betainc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/signal_handler.cpp -o tmp/core/signal_handler.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/math/betainc.cpp -o tmp/core/math/betainc.o ( 5/548) [CC] tmp/core/dwi/gradient.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/dwi/gradient.cpp -o tmp/core/dwi/gradient.o ( 6/548) [CC] tmp/core/formats/mgh.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/formats/mgh.cpp -o tmp/core/formats/mgh.o ( 7/548) [CC] tmp/core/formats/list.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/formats/list.cpp -o tmp/core/formats/list.o ( 8/548) [CC] tmp/core/file/key_value.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/file/key_value.cpp -o tmp/core/file/key_value.o ( 9/548) [CC] tmp/core/formats/ram.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/formats/ram.cpp -o tmp/core/formats/ram.o ( 10/548) [CC] tmp/core/metadata/slice_encoding.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/metadata/slice_encoding.cpp -o tmp/core/metadata/slice_encoding.o ( 11/548) [CC] tmp/core/formats/nifti1.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/formats/nifti1.cpp -o tmp/core/formats/nifti1.o ( 12/548) [CC] tmp/core/filter/connected_components.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/filter/connected_components.cpp -o tmp/core/filter/connected_components.o ( 13/548) [CC] tmp/core/app.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/app.cpp -o tmp/core/app.o ( 14/548) [CC] tmp/core/formats/mrtrix_gz.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/formats/mrtrix_gz.cpp -o tmp/core/formats/mrtrix_gz.o ( 15/548) [CC] tmp/core/image_io/base.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 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tmp/core/adapter/reslice.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/adapter/reslice.cpp -o tmp/core/adapter/reslice.o ( 18/548) [CC] tmp/core/file/dicom/series.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat 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-mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/formats/par.cpp -o tmp/core/formats/par.o ( 25/548) [CC] tmp/core/formats/mgz.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/formats/mgz.cpp -o tmp/core/formats/mgz.o ( 26/548) [CC] tmp/core/math/stats/shuffle.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/math/stats/shuffle.cpp -o tmp/core/math/stats/shuffle.o ( 27/548) [CC] tmp/core/formats/mrtrix_sparse_legacy.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/formats/mrtrix_sparse_legacy.cpp -o tmp/core/formats/mrtrix_sparse_legacy.o ( 28/548) [CC] tmp/core/axes.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/axes.cpp -o tmp/core/axes.o ( 29/548) [CC] tmp/core/image_io/fetch_store.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/image_io/fetch_store.cpp -o tmp/core/image_io/fetch_store.o ( 30/548) [CC] tmp/core/file/json_utils.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/file/json_utils.cpp -o tmp/core/file/json_utils.o ( 31/548) [CC] tmp/core/formats/png.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/formats/png.cpp -o tmp/core/formats/png.o ( 32/548) [CC] tmp/core/image_io/sparse.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/image_io/sparse.cpp -o tmp/core/image_io/sparse.o ( 33/548) [CC] tmp/core/math/average_space.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/math/average_space.cpp -o tmp/core/math/average_space.o ( 34/548) [CC] tmp/core/metadata/bids.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/metadata/bids.cpp -o tmp/core/metadata/bids.o ( 35/548) [CC] tmp/core/formats/nifti2_gz.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/formats/nifti2_gz.cpp -o tmp/core/formats/nifti2_gz.o ( 36/548) [CC] tmp/core/datatype.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/datatype.cpp -o tmp/core/datatype.o ( 37/548) [CC] tmp/core/formats/xds.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/formats/xds.cpp -o tmp/core/formats/xds.o ( 38/548) [CC] tmp/core/file/dicom/element.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/file/dicom/element.cpp -o tmp/core/file/dicom/element.o ( 39/548) [CC] tmp/core/image_io/scratch.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/image_io/scratch.cpp -o tmp/core/image_io/scratch.o ( 40/548) [CC] tmp/core/formats/mrtrix_utils.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/formats/mrtrix_utils.cpp -o tmp/core/formats/mrtrix_utils.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/file/json_utils.cpp -o tmp/core/file/json_utils.o: In file included from /usr/include/c++/15/bits/exception_ptr.h:41, from /usr/include/c++/15/exception:168, from /usr/include/c++/15/ios:43, from /usr/include/c++/15/istream:42, from /usr/include/c++/15/fstream:42, from core/file/json_utils.cpp:17: In function ‘std::_Require >, std::is_move_constructible<_Tp>, std::is_move_assignable<_Tp> > std::swap(_Tp&, _Tp&) [with _Tp = nlohmann::basic_json<>::json_value]’, inlined from ‘nlohmann::basic_json::value_type& nlohmann::basic_json::operator=(nlohmann::basic_json) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string; BooleanType = bool; NumberIntegerType = long int; NumberUnsignedType = long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at ./core/file/json.h:2890:18, inlined from ‘nlohmann::basic_json nlohmann::basic_json::parser::parse_internal(bool) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string; BooleanType = bool; NumberIntegerType = long int; NumberUnsignedType = long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at ./core/file/json.h:12715:36: /usr/include/c++/15/bits/move.h:236:7: warning: ‘.nlohmann::basic_json, std::allocator >, bool, long int, long unsigned int, double, std::allocator, nlohmann::adl_serializer>::m_value’ may be used uninitialized [-Wmaybe-uninitialized] 236 | __a = _GLIBCXX_MOVE(__b); | ^~~ In file included from ./core/file/json_utils.h:20, from core/file/json_utils.cpp:20: ./core/file/json.h: In member function ‘nlohmann::basic_json nlohmann::basic_json::parser::parse_internal(bool) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string; BooleanType = bool; NumberIntegerType = long int; NumberUnsignedType = long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’: ./core/file/json.h:12715:38: note: ‘’ declared here 12715 | result = basic_json(value_t::discarded); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘std::_Require >, std::is_move_constructible<_Tp>, std::is_move_assignable<_Tp> > std::swap(_Tp&, _Tp&) [with _Tp = nlohmann::basic_json<>::json_value]’, inlined from ‘nlohmann::basic_json::value_type& nlohmann::basic_json::operator=(nlohmann::basic_json) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string; BooleanType = bool; NumberIntegerType = long int; NumberUnsignedType = long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at ./core/file/json.h:2890:18, inlined from ‘nlohmann::basic_json nlohmann::basic_json::parser::parse_internal(bool) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string; BooleanType = bool; NumberIntegerType = long int; NumberUnsignedType = long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at ./core/file/json.h:12768:32: /usr/include/c++/15/bits/move.h:236:7: warning: ‘.nlohmann::basic_json, std::allocator >, bool, long int, long unsigned int, double, std::allocator, nlohmann::adl_serializer>::m_value’ may be used uninitialized [-Wmaybe-uninitialized] 236 | __a = _GLIBCXX_MOVE(__b); | ^~~ ./core/file/json.h: In member function ‘nlohmann::basic_json nlohmann::basic_json::parser::parse_internal(bool) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string; BooleanType = bool; NumberIntegerType = long int; NumberUnsignedType = long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’: ./core/file/json.h:12768:34: note: ‘’ declared here 12768 | result = basic_json(value_t::discarded); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘std::_Require >, std::is_move_constructible<_Tp>, std::is_move_assignable<_Tp> > std::swap(_Tp&, _Tp&) [with _Tp = nlohmann::basic_json<>::json_value]’, inlined from ‘nlohmann::basic_json::value_type& nlohmann::basic_json::operator=(nlohmann::basic_json) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string; BooleanType = bool; NumberIntegerType = long int; NumberUnsignedType = long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at ./core/file/json.h:2890:18, inlined from ‘nlohmann::basic_json nlohmann::basic_json::parser::parse_internal(bool) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string; BooleanType = bool; NumberIntegerType = long int; NumberUnsignedType = long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at ./core/file/json.h:12792:36: /usr/include/c++/15/bits/move.h:236:7: warning: ‘.nlohmann::basic_json, std::allocator >, bool, long int, long unsigned int, double, std::allocator, nlohmann::adl_serializer>::m_value’ may be used uninitialized [-Wmaybe-uninitialized] 236 | __a = _GLIBCXX_MOVE(__b); | ^~~ ./core/file/json.h: In member function ‘nlohmann::basic_json nlohmann::basic_json::parser::parse_internal(bool) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string; BooleanType = bool; NumberIntegerType = long int; NumberUnsignedType = long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’: ./core/file/json.h:12792:38: note: ‘’ declared here 12792 | result = basic_json(value_t::discarded); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘std::_Require >, std::is_move_constructible<_Tp>, std::is_move_assignable<_Tp> > std::swap(_Tp&, _Tp&) [with _Tp = nlohmann::basic_json<>::json_value]’, inlined from ‘nlohmann::basic_json::value_type& nlohmann::basic_json::operator=(nlohmann::basic_json) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string; BooleanType = bool; NumberIntegerType = long int; NumberUnsignedType = long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at ./core/file/json.h:2890:18, inlined from ‘nlohmann::basic_json nlohmann::basic_json::parser::parse_internal(bool) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string; BooleanType = bool; NumberIntegerType = long int; NumberUnsignedType = long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at ./core/file/json.h:12822:32: /usr/include/c++/15/bits/move.h:236:7: warning: ‘.nlohmann::basic_json, std::allocator >, bool, long int, long unsigned int, double, std::allocator, nlohmann::adl_serializer>::m_value’ may be used uninitialized [-Wmaybe-uninitialized] 236 | __a = _GLIBCXX_MOVE(__b); | ^~~ ./core/file/json.h: In member function ‘nlohmann::basic_json nlohmann::basic_json::parser::parse_internal(bool) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string; BooleanType = bool; NumberIntegerType = long int; NumberUnsignedType = long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’: ./core/file/json.h:12822:34: note: ‘’ declared here 12822 | result = basic_json(value_t::discarded); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘std::_Require >, std::is_move_constructible<_Tp>, std::is_move_assignable<_Tp> > std::swap(_Tp&, _Tp&) [with _Tp = nlohmann::basic_json<>::json_value]’, inlined from ‘nlohmann::basic_json::value_type& nlohmann::basic_json::operator=(nlohmann::basic_json) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string; BooleanType = bool; NumberIntegerType = long int; NumberUnsignedType = long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at ./core/file/json.h:2890:18, inlined from ‘nlohmann::basic_json nlohmann::basic_json::parser::parse_internal(bool) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string; BooleanType = bool; NumberIntegerType = long int; NumberUnsignedType = long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at ./core/file/json.h:12897:24: /usr/include/c++/15/bits/move.h:236:7: warning: ‘.nlohmann::basic_json, std::allocator >, bool, long int, long unsigned int, double, std::allocator, nlohmann::adl_serializer>::m_value’ may be used uninitialized [-Wmaybe-uninitialized] 236 | __a = _GLIBCXX_MOVE(__b); | ^~~ ./core/file/json.h: In member function ‘nlohmann::basic_json nlohmann::basic_json::parser::parse_internal(bool) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string; BooleanType = bool; NumberIntegerType = long int; NumberUnsignedType = long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’: ./core/file/json.h:12897:26: note: ‘’ declared here 12897 | result = basic_json(value_t::discarded); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ( 41/548) [CC] tmp/core/image_io/tiff.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/image_io/tiff.cpp -o tmp/core/image_io/tiff.o ( 42/548) [CC] tmp/core/formats/nifti1_gz.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse 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tmp/core/file/mmap.o ( 44/548) [CC] tmp/core/image_io/ram.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/image_io/ram.cpp -o tmp/core/image_io/ram.o ( 45/548) [CC] tmp/core/image_io/gz.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/image_io/gz.cpp -o tmp/core/image_io/gz.o ( 46/548) [CC] tmp/core/image_io/null.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc 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-ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/image_io/mosaic.cpp -o tmp/core/image_io/mosaic.o ( 49/548) [CC] tmp/core/file/dicom/mapper.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/file/dicom/mapper.cpp -o tmp/core/file/dicom/mapper.o ( 50/548) [CC] tmp/core/version.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/version.cpp -o tmp/core/version.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/version.cpp -o tmp/core/version.o: core/version.cpp:5:30: warning: macro ‘__DATE__’ might prevent reproducible builds [-Wdate-time] 5 | const char* build_date = __DATE__; | ^~~~~~~~ ( 51/548) [CC] tmp/core/math/SH.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security 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version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/5ttcheck.cpp -o tmp/cmd/5ttcheck.o ( 99/548) [CC] tmp/src/dwi/tractography/ACT/act.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/ACT/act.cpp -o tmp/src/dwi/tractography/ACT/act.o (100/548) [CC] tmp/src/dwi/directions/file.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/directions/file.cpp -o tmp/src/dwi/directions/file.o (101/548) [CC] tmp/cmd/dirorder.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/dirorder.cpp -o tmp/cmd/dirorder.o (102/548) [CC] tmp/cmd/sh2amp.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/sh2amp.cpp -o tmp/cmd/sh2amp.o (103/548) [CC] tmp/src/dwi/directions/predefined.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/directions/predefined.cpp -o tmp/src/dwi/directions/predefined.o (104/548) [CC] tmp/cmd/fod2dec.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/fod2dec.cpp -o tmp/cmd/fod2dec.o (105/548) [LD] lib/libmrtrix.so g++ tmp/core/signal_handler.o tmp/core/math/betainc.o tmp/core/dwi/gradient.o tmp/core/formats/mgh.o tmp/core/formats/list.o tmp/core/file/key_value.o tmp/core/formats/ram.o tmp/core/metadata/slice_encoding.o tmp/core/formats/nifti1.o tmp/core/filter/connected_components.o tmp/core/app.o tmp/core/formats/mrtrix_gz.o tmp/core/image_io/base.o tmp/core/file/nifti_utils.o tmp/core/adapter/reslice.o tmp/core/file/dicom/series.o tmp/core/file/ofstream.o tmp/core/formats/pipe.o tmp/core/image_io/default.o tmp/core/header.o tmp/core/mrtrix.o tmp/core/formats/par.o tmp/core/formats/mgz.o tmp/core/math/stats/shuffle.o tmp/core/formats/mrtrix_sparse_legacy.o tmp/core/axes.o tmp/core/image_io/fetch_store.o tmp/core/file/json_utils.o tmp/core/formats/png.o tmp/core/image_io/sparse.o tmp/core/math/average_space.o tmp/core/metadata/bids.o tmp/core/formats/nifti2_gz.o tmp/core/datatype.o tmp/core/formats/xds.o tmp/core/file/dicom/element.o tmp/core/image_io/scratch.o tmp/core/formats/mrtrix_utils.o tmp/core/image_io/tiff.o tmp/core/formats/nifti1_gz.o tmp/core/file/mmap.o tmp/core/image_io/ram.o tmp/core/image_io/gz.o tmp/core/image_io/null.o tmp/core/stats.o tmp/core/image_io/mosaic.o tmp/core/file/dicom/mapper.o tmp/core/version.o tmp/core/math/SH.o tmp/core/formats/tiff.o tmp/core/file/dicom/study.o tmp/core/formats/dicom.o tmp/core/image_io/png.o tmp/core/file/name_parser.o tmp/core/algo/histogram.o tmp/core/file/png.o tmp/core/math/stats/fwe.o tmp/core/thread.o tmp/core/file/config.o tmp/core/metadata/phase_encoding.o tmp/core/file/dicom/quick_scan.o tmp/core/image_io/pipe.o tmp/core/math/bessel.o tmp/core/file/tiff.o tmp/core/math/erfinv.o tmp/core/math/stats/glm.o tmp/core/math/zstatistic.o tmp/core/misc/bitset.o tmp/core/stride.o tmp/core/file/dicom/patient.o tmp/core/math/stats/import.o tmp/core/file/dicom/image.o tmp/core/file/mgh.o tmp/core/file/dicom/select_cmdline.o tmp/core/image_io/variable_scaling.o tmp/core/dwi/shells.o tmp/core/exception.o tmp/core/formats/nifti2.o tmp/core/formats/mri.o tmp/core/progressbar.o tmp/core/file/dicom/dict.o tmp/core/formats/mrtrix.o tmp/core/file/dicom/tree.o -shared -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -o lib/libmrtrix.so (106/548) [LB] bin/mredit g++ tmp/src/exec_version.o tmp/cmd/mredit.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mredit (107/548) [LB] bin/tck2connectome g++ tmp/cmd/tck2connectome.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/connectome/tck2nodes.o tmp/src/exec_version.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/connectome/matrix.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/connectome/connectome.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/weights.o tmp/src/connectome/connectome.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tck2connectome (108/548) [LB] bin/tensor2metric g++ tmp/src/exec_version.o tmp/cmd/tensor2metric.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tensor2metric (109/548) [LB] bin/5ttcheck g++ tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/cmd/5ttcheck.o tmp/src/dwi/tractography/ACT/act.o tmp/src/dwi/tractography/rng.o tmp/src/exec_version.o tmp/src/dwi/tractography/roi.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/5ttcheck (110/548) [CC] tmp/cmd/sh2power.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/sh2power.cpp -o tmp/cmd/sh2power.o (111/548) [LB] bin/sh2amp g++ tmp/cmd/sh2amp.o tmp/src/exec_version.o tmp/src/dwi/directions/file.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/sh2amp (112/548) [CC] tmp/cmd/shbasis.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/shbasis.cpp -o tmp/cmd/shbasis.o (113/548) [LB] bin/sh2power g++ tmp/src/exec_version.o tmp/cmd/sh2power.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/sh2power (114/548) [CC] tmp/cmd/mrstats.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrstats.cpp -o tmp/cmd/mrstats.o (115/548) [LB] bin/dirorder g++ tmp/src/dwi/directions/file.o tmp/src/exec_version.o tmp/cmd/dirorder.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dirorder (116/548) [CC] tmp/cmd/tcktransform.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tcktransform.cpp -o tmp/cmd/tcktransform.o (117/548) [LB] bin/mrstats g++ tmp/src/exec_version.o tmp/cmd/mrstats.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrstats (118/548) [CC] tmp/src/dwi/tractography/resampling/upsampler.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/resampling/upsampler.cpp -o tmp/src/dwi/tractography/resampling/upsampler.o (119/548) [LB] bin/fod2dec g++ tmp/src/exec_version.o tmp/src/dwi/directions/predefined.o tmp/cmd/fod2dec.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/fod2dec (120/548) [CC] tmp/src/dwi/tractography/mapping/mapper.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/mapping/mapper.cpp -o tmp/src/dwi/tractography/mapping/mapper.o (121/548) [CC] tmp/src/dwi/tractography/tracking/method.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/tracking/method.cpp -o tmp/src/dwi/tractography/tracking/method.o (122/548) [LB] bin/tcktransform g++ tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/cmd/tcktransform.o tmp/src/exec_version.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/rng.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tcktransform (123/548) [CC] tmp/src/dwi/tractography/tracking/shared.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/tracking/shared.cpp -o tmp/src/dwi/tractography/tracking/shared.o (124/548) [LB] bin/shbasis g++ tmp/cmd/shbasis.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/shbasis (125/548) [CC] tmp/src/dwi/tractography/resampling/downsampler.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/resampling/downsampler.cpp -o tmp/src/dwi/tractography/resampling/downsampler.o (126/548) [CC] tmp/src/dwi/tractography/resampling/resampling.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/resampling/resampling.cpp -o tmp/src/dwi/tractography/resampling/resampling.o (127/548) [CC] tmp/src/dwi/tractography/mapping/mapping.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/mapping/mapping.cpp -o tmp/src/dwi/tractography/mapping/mapping.o (128/548) [CC] tmp/src/dwi/tractography/mapping/mapper_plugins.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/mapping/mapper_plugins.cpp -o tmp/src/dwi/tractography/mapping/mapper_plugins.o (129/548) [CC] tmp/src/dwi/tractography/algorithms/iFOD2.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/algorithms/iFOD2.cpp -o tmp/src/dwi/tractography/algorithms/iFOD2.o (130/548) [CC] tmp/src/dwi/tractography/tracking/write_kernel.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/tracking/write_kernel.cpp -o tmp/src/dwi/tractography/tracking/write_kernel.o (131/548) [CC] tmp/src/dwi/tractography/SIFT/proc_mask.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/SIFT/proc_mask.cpp -o tmp/src/dwi/tractography/SIFT/proc_mask.o (132/548) [CC] tmp/src/dwi/tractography/ACT/gmwmi.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/ACT/gmwmi.cpp -o tmp/src/dwi/tractography/ACT/gmwmi.o (133/548) [CC] tmp/src/dwi/tractography/tracking/tractography.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/tracking/tractography.cpp -o tmp/src/dwi/tractography/tracking/tractography.o (134/548) [CC] tmp/src/dwi/tractography/seeding/gmwmi.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/seeding/gmwmi.cpp -o tmp/src/dwi/tractography/seeding/gmwmi.o (135/548) [CC] tmp/src/dwi/tractography/resampling/arc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/resampling/arc.cpp -o tmp/src/dwi/tractography/resampling/arc.o (136/548) [CC] tmp/src/dwi/tractography/resampling/endpoints.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/resampling/endpoints.cpp -o tmp/src/dwi/tractography/resampling/endpoints.o (137/548) [CC] tmp/src/dwi/tractography/algorithms/iFOD1.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/algorithms/iFOD1.cpp -o tmp/src/dwi/tractography/algorithms/iFOD1.o (138/548) [CC] tmp/src/dwi/fmls.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/fmls.cpp -o tmp/src/dwi/fmls.o (139/548) [CC] tmp/src/dwi/tractography/tracking/early_exit.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/tracking/early_exit.cpp -o tmp/src/dwi/tractography/tracking/early_exit.o (140/548) [CC] tmp/src/dwi/tractography/seeding/dynamic.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/seeding/dynamic.cpp -o tmp/src/dwi/tractography/seeding/dynamic.o (141/548) [CC] tmp/src/dwi/tractography/mapping/voxel.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/mapping/voxel.cpp -o tmp/src/dwi/tractography/mapping/voxel.o (142/548) [CC] tmp/src/dwi/directions/set.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/directions/set.cpp -o tmp/src/dwi/directions/set.o (143/548) [CC] tmp/src/dwi/tractography/mapping/twi_stats.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/mapping/twi_stats.cpp -o tmp/src/dwi/tractography/mapping/twi_stats.o (144/548) [CC] tmp/src/dwi/tractography/resampling/fixed_step_size.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/resampling/fixed_step_size.cpp -o tmp/src/dwi/tractography/resampling/fixed_step_size.o (145/548) [CC] tmp/src/dwi/directions/mask.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/directions/mask.cpp -o tmp/src/dwi/directions/mask.o (146/548) [CC] tmp/src/dwi/tractography/mapping/fixel_td_map.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/mapping/fixel_td_map.cpp -o tmp/src/dwi/tractography/mapping/fixel_td_map.o (147/548) [CC] tmp/cmd/tckgen.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tckgen.cpp -o tmp/cmd/tckgen.o (148/548) [CC] tmp/src/dwi/tractography/seeding/basic.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/seeding/basic.cpp -o tmp/src/dwi/tractography/seeding/basic.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/seeding/dynamic.cpp -o tmp/src/dwi/tractography/seeding/dynamic.o: In file included from src/dwi/tractography/SIFT/model_base.h:21, from src/dwi/tractography/seeding/dynamic.h:32, from src/dwi/tractography/seeding/dynamic.cpp:17: src/dwi/tractography/mapping/fixel_td_map.h: In instantiation of ‘class MR::DWI::Tractography::Mapping::Fixel_TD_map’: src/dwi/tractography/SIFT/model_base.h:124:15: required from ‘class MR::DWI::Tractography::SIFT::ModelBase’ 124 | class ModelBase : public Mapping::Fixel_TD_map | ^~~~~~~~~ src/dwi/tractography/seeding/dynamic.h:207:49: required from here 207 | class Dynamic : public Base, public SIFT::ModelBase | ^~~~~~~~~~~~~~~~~~~~~~~~ src/dwi/fixel_map.h:187:10: warning: ‘bool MR::DWI::Fixel_map::operator()(const MR::DWI::FMLS::FOD_lobes&) [with Fixel = MR::DWI::Tractography::Seeding::Fixel_TD_seed]’ was hidden [-Woverloaded-virtual=] 187 | bool Fixel_map::operator() (const FMLS::FOD_lobes& in) | ^~~~~~~~~~~~~~~~ In file included from src/dwi/tractography/SIFT/model_base.h:30: src/dwi/tractography/mapping/fixel_td_map.h:70:14: note: by ‘bool MR::DWI::Tractography::Mapping::Fixel_TD_map::operator()(const MR::DWI::Tractography::Mapping::SetDixel&) [with Fixel = MR::DWI::Tractography::Seeding::Fixel_TD_seed]’ 70 | bool Fixel_TD_map::operator() (const SetDixel& in) | ^~~~~~~~~~~~~~~~~~~ (149/548) [CC] tmp/src/dwi/tractography/resampling/fixed_num_points.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/resampling/fixed_num_points.cpp -o tmp/src/dwi/tractography/resampling/fixed_num_points.o (150/548) [CC] tmp/src/dwi/tractography/seeding/seeding.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/seeding/seeding.cpp -o tmp/src/dwi/tractography/seeding/seeding.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/fmls.cpp -o tmp/src/dwi/fmls.o: In file included from src/dwi/fmls.h:23, from src/dwi/fmls.cpp:17: ./core/math/SH.h: In function ‘void MR::Math::SH::derivatives(const VectorType&, int, typename VectorType::Scalar, typename VectorType::Scalar, typename VectorType::Scalar&, typename VectorType::Scalar&, typename VectorType::Scalar&, typename VectorType::Scalar&, typename VectorType::Scalar&, typename VectorType::Scalar&, PrecomputedAL*) [with VectorType = MR::DWI::FMLS::SH_coefs]’: ./core/math/SH.h:604:33: warning: ‘*AL.1211[0]’ may be used uninitialized [-Wmaybe-uninitialized] 604 | amplitude = sh[0] * AL[0]; | ~~^ (151/548) [CC] tmp/cmd/fixelcrop.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/fixelcrop.cpp -o tmp/cmd/fixelcrop.o (152/548) [CC] tmp/src/surface/algo/mesh2image.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/surface/algo/mesh2image.cpp -o tmp/src/surface/algo/mesh2image.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/seeding/seeding.cpp -o tmp/src/dwi/tractography/seeding/seeding.o: In file included from src/dwi/tractography/SIFT/model_base.h:21, from src/dwi/tractography/seeding/dynamic.h:32, from src/dwi/tractography/seeding/seeding.h:23, from src/dwi/tractography/seeding/seeding.cpp:18: src/dwi/tractography/mapping/fixel_td_map.h: In instantiation of ‘class MR::DWI::Tractography::Mapping::Fixel_TD_map’: src/dwi/tractography/SIFT/model_base.h:124:15: required from ‘class MR::DWI::Tractography::SIFT::ModelBase’ 124 | class ModelBase : public Mapping::Fixel_TD_map | ^~~~~~~~~ src/dwi/tractography/seeding/dynamic.h:207:49: required from here 207 | class Dynamic : public Base, public SIFT::ModelBase | ^~~~~~~~~~~~~~~~~~~~~~~~ src/dwi/fixel_map.h:187:10: warning: ‘bool MR::DWI::Fixel_map::operator()(const MR::DWI::FMLS::FOD_lobes&) [with Fixel = MR::DWI::Tractography::Seeding::Fixel_TD_seed]’ was hidden [-Woverloaded-virtual=] 187 | bool Fixel_map::operator() (const FMLS::FOD_lobes& in) | ^~~~~~~~~~~~~~~~ In file included from src/dwi/tractography/SIFT/model_base.h:30: src/dwi/tractography/mapping/fixel_td_map.h:70:14: note: by ‘bool MR::DWI::Tractography::Mapping::Fixel_TD_map::operator()(const MR::DWI::Tractography::Mapping::SetDixel&) [with Fixel = MR::DWI::Tractography::Seeding::Fixel_TD_seed]’ 70 | bool Fixel_TD_map::operator() (const SetDixel& in) | ^~~~~~~~~~~~~~~~~~~ (153/548) [CC] tmp/src/surface/mesh_multi.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/surface/mesh_multi.cpp -o tmp/src/surface/mesh_multi.o (154/548) [CC] tmp/src/surface/filter/base.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/surface/filter/base.cpp -o tmp/src/surface/filter/base.o (155/548) [CC] tmp/src/connectome/lut.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/connectome/lut.cpp -o tmp/src/connectome/lut.o (156/548) [LB] bin/fixelcrop g++ tmp/src/exec_version.o tmp/cmd/fixelcrop.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/fixelcrop (157/548) [CC] tmp/src/surface/mesh.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/surface/mesh.cpp -o tmp/src/surface/mesh.o (158/548) [CC] tmp/src/surface/polygon.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/surface/polygon.cpp -o tmp/src/surface/polygon.o (159/548) [CC] tmp/src/surface/filter/vertex_transform.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/surface/filter/vertex_transform.cpp -o tmp/src/surface/filter/vertex_transform.o (160/548) [CC] tmp/src/surface/freesurfer.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/surface/freesurfer.cpp -o tmp/src/surface/freesurfer.o (161/548) [CC] tmp/cmd/mesh2voxel.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mesh2voxel.cpp -o tmp/cmd/mesh2voxel.o (162/548) [CC] tmp/src/surface/scalar.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/surface/scalar.cpp -o tmp/src/surface/scalar.o (163/548) [CC] tmp/cmd/mrhistmatch.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrhistmatch.cpp -o tmp/cmd/mrhistmatch.o (164/548) [CC] tmp/cmd/dwi2adc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/dwi2adc.cpp -o tmp/cmd/dwi2adc.o (165/548) [LB] bin/mesh2voxel g++ tmp/src/surface/algo/mesh2image.o tmp/src/surface/mesh_multi.o tmp/src/surface/filter/base.o tmp/src/exec_version.o tmp/src/connectome/lut.o tmp/src/surface/mesh.o tmp/src/surface/polygon.o tmp/src/surface/filter/vertex_transform.o tmp/src/surface/freesurfer.o tmp/cmd/mesh2voxel.o tmp/src/surface/scalar.o tmp/src/connectome/connectome.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mesh2voxel (166/548) [CC] tmp/cmd/sh2peaks.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/sh2peaks.cpp -o tmp/cmd/sh2peaks.o (167/548) [LB] bin/mrhistmatch g++ tmp/cmd/mrhistmatch.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrhistmatch (168/548) [CC] tmp/cmd/voxel2mesh.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/voxel2mesh.cpp -o tmp/cmd/voxel2mesh.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/sh2peaks.cpp -o tmp/cmd/sh2peaks.o: In file included from cmd/sh2peaks.cpp:18: ./core/math/SH.h: In function ‘void MR::Math::SH::derivatives(const VectorType&, int, typename VectorType::Scalar, typename VectorType::Scalar, typename VectorType::Scalar&, typename VectorType::Scalar&, typename VectorType::Scalar&, typename VectorType::Scalar&, typename VectorType::Scalar&, typename VectorType::Scalar&, PrecomputedAL*) [with VectorType = Eigen::Matrix]’: ./core/math/SH.h:604:33: warning: ‘*AL.668[0]’ may be used uninitialized [-Wmaybe-uninitialized] 604 | amplitude = sh[0] * AL[0]; | ~~^ (169/548) [LB] bin/sh2peaks g++ tmp/src/exec_version.o tmp/cmd/sh2peaks.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/sh2peaks (170/548) [CC] tmp/cmd/tsfsmooth.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tsfsmooth.cpp -o tmp/cmd/tsfsmooth.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/dwi2adc.cpp -o tmp/cmd/dwi2adc.o: In file included from /usr/include/string.h:548, from /usr/include/c++/15/cstring:48, from ./core/app.h:20, from ./core/command.h:25, from cmd/dwi2adc.cpp:17: In function ‘void* memcpy(void*, const void*, size_t)’, inlined from ‘static void Eigen::internal::smart_copy_helper::run(const T*, const T*, T*) [with T = double]’ at /usr/include/eigen3/Eigen/src/Core/util/Memory.h:527:11, inlined from ‘void Eigen::internal::smart_copy(const T*, const T*, T*) [with T = double]’ at /usr/include/eigen3/Eigen/src/Core/util/Memory.h:517:65, inlined from ‘Eigen::DenseStorage::DenseStorage(const Eigen::DenseStorage&) [with T = double; int _Cols = 1; int _Options = 0]’ at /usr/include/eigen3/Eigen/src/Core/DenseStorage.h:593:27, inlined from ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::PlainObjectBase&) [with Derived = Eigen::Matrix]’ at /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:512:17, inlined from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>&) [with _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]’ at /usr/include/eigen3/Eigen/src/Core/Matrix.h:414:65, inlined from ‘DWI2ADC::DWI2ADC(const DWI2ADC&)’ at cmd/dwi2adc.cpp:50:7, inlined from ‘MR::{anonymous}::ThreadedLoopRunInner::ThreadedLoopRunInner(const MR::vector&, const MR::vector&, const Functor&, ImageType& ...) [with int N = 2; Functor = DWI2ADC; ImageType = {MR::Image, MR::Image}]’ at ./core/algo/threaded_loop.h:276:11, inlined from ‘void MR::{anonymous}::ThreadedLoopRunOuter::run(Functor&&, ImageType&& ...) [with Functor = DWI2ADC; ImageType = {MR::Image&, MR::Image&}; OuterLoopType = MR::LoopAlongDynamicAxesProgress]’ at ./core/algo/threaded_loop.h:376:19, inlined from ‘void run()’ at cmd/dwi2adc.cpp:110:10: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:29:33: warning: ‘*(__int128 unsigned*)result’ may be used uninitialized [-Wmaybe-uninitialized] 29 | return __builtin___memcpy_chk (__dest, __src, __len, | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ 30 | __glibc_objsize0 (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ (171/548) [LB] bin/dwi2adc g++ tmp/cmd/dwi2adc.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dwi2adc (172/548) [CC] tmp/src/dwi/tractography/SIFT/sifter.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/SIFT/sifter.cpp -o tmp/src/dwi/tractography/SIFT/sifter.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tckgen.cpp -o tmp/cmd/tckgen.o: In file included from src/dwi/tractography/SIFT/model_base.h:21, from src/dwi/tractography/seeding/dynamic.h:32, from src/dwi/tractography/tracking/exec.h:36, from cmd/tckgen.cpp:23: src/dwi/tractography/mapping/fixel_td_map.h: In instantiation of ‘class MR::DWI::Tractography::Mapping::Fixel_TD_map’: src/dwi/tractography/SIFT/model_base.h:124:15: required from ‘class MR::DWI::Tractography::SIFT::ModelBase’ 124 | class ModelBase : public Mapping::Fixel_TD_map | ^~~~~~~~~ src/dwi/tractography/seeding/dynamic.h:207:49: required from here 207 | class Dynamic : public Base, public SIFT::ModelBase | ^~~~~~~~~~~~~~~~~~~~~~~~ src/dwi/fixel_map.h:187:10: warning: ‘bool MR::DWI::Fixel_map::operator()(const MR::DWI::FMLS::FOD_lobes&) [with Fixel = MR::DWI::Tractography::Seeding::Fixel_TD_seed]’ was hidden [-Woverloaded-virtual=] 187 | bool Fixel_map::operator() (const FMLS::FOD_lobes& in) | ^~~~~~~~~~~~~~~~ In file included from src/dwi/tractography/SIFT/model_base.h:30: src/dwi/tractography/mapping/fixel_td_map.h:70:14: note: by ‘bool MR::DWI::Tractography::Mapping::Fixel_TD_map::operator()(const MR::DWI::Tractography::Mapping::SetDixel&) [with Fixel = MR::DWI::Tractography::Seeding::Fixel_TD_seed]’ 70 | bool Fixel_TD_map::operator() (const SetDixel& in) | ^~~~~~~~~~~~~~~~~~~ In file included from src/dwi/tractography/mapping/mapper_plugins.h:24, from src/dwi/tractography/mapping/mapper.h:31, from src/dwi/tractography/tracking/exec.h:32: ./core/math/SH.h: In function ‘void MR::Math::SH::derivatives(const VectorType&, int, typename VectorType::Scalar, typename VectorType::Scalar, typename VectorType::Scalar&, typename VectorType::Scalar&, typename VectorType::Scalar&, typename VectorType::Scalar&, typename VectorType::Scalar&, typename VectorType::Scalar&, PrecomputedAL*) [with VectorType = Eigen::Matrix]’: ./core/math/SH.h:604:33: warning: ‘*AL.2101[0]’ may be used uninitialized [-Wmaybe-uninitialized] 604 | amplitude = sh[0] * AL[0]; | ~~^ (173/548) [LB] bin/tckgen g++ tmp/src/dwi/tractography/resampling/upsampler.o tmp/src/dwi/tractography/mapping/mapper.o tmp/src/dwi/tractography/tracking/method.o tmp/src/dwi/tractography/tracking/shared.o tmp/src/dwi/tractography/resampling/downsampler.o tmp/src/dwi/tractography/resampling/resampling.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/mapping/mapping.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/mapping/mapper_plugins.o tmp/src/dwi/tractography/algorithms/iFOD2.o tmp/src/dwi/tractography/tracking/write_kernel.o tmp/src/dwi/tractography/SIFT/proc_mask.o tmp/src/dwi/tractography/ACT/gmwmi.o tmp/src/dwi/tractography/tracking/tractography.o tmp/src/dwi/directions/predefined.o tmp/src/dwi/tractography/seeding/gmwmi.o tmp/src/dwi/tractography/resampling/arc.o tmp/src/dwi/tractography/resampling/endpoints.o tmp/src/dwi/tractography/algorithms/iFOD1.o tmp/src/dwi/fmls.o tmp/src/dwi/tractography/tracking/early_exit.o tmp/src/dwi/tractography/seeding/dynamic.o tmp/src/dwi/tractography/mapping/voxel.o tmp/src/dwi/directions/set.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/mapping/twi_stats.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/resampling/fixed_step_size.o tmp/src/dwi/directions/mask.o tmp/src/dwi/tractography/mapping/fixel_td_map.o tmp/src/exec_version.o tmp/cmd/tckgen.o tmp/src/dwi/tractography/seeding/basic.o tmp/src/dwi/tractography/resampling/fixed_num_points.o tmp/src/dwi/tractography/ACT/act.o tmp/src/dwi/tractography/seeding/seeding.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tckgen (174/548) [CC] tmp/src/dwi/tractography/SIFT/sift.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/SIFT/sift.cpp -o tmp/src/dwi/tractography/SIFT/sift.o (175/548) [LB] bin/tsfsmooth g++ tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/src/exec_version.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/roi.o tmp/cmd/tsfsmooth.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tsfsmooth (176/548) [CC] tmp/src/dwi/tractography/SIFT/gradient_sort.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/SIFT/gradient_sort.cpp -o tmp/src/dwi/tractography/SIFT/gradient_sort.o (177/548) [CC] tmp/src/dwi/tractography/SIFT/track_contribution.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/SIFT/track_contribution.cpp -o tmp/src/dwi/tractography/SIFT/track_contribution.o (178/548) [CC] tmp/cmd/tcksift.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tcksift.cpp -o tmp/cmd/tcksift.o (179/548) [CC] tmp/src/dwi/tractography/SIFT/track_index_range.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/SIFT/track_index_range.cpp -o tmp/src/dwi/tractography/SIFT/track_index_range.o (180/548) [CC] tmp/cmd/mrthreshold.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrthreshold.cpp -o tmp/cmd/mrthreshold.o (181/548) [LB] bin/voxel2mesh g++ tmp/cmd/voxel2mesh.o tmp/src/exec_version.o tmp/src/connectome/lut.o tmp/src/surface/mesh.o tmp/src/surface/polygon.o tmp/src/surface/freesurfer.o tmp/src/surface/scalar.o tmp/src/connectome/connectome.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/voxel2mesh (182/548) [CC] tmp/src/gui/crosshair.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/crosshair.cpp -o tmp/src/gui/crosshair.o (183/548) [CC] tmp/src/gui/dialog/progress.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/dialog/progress.cpp -o tmp/src/gui/dialog/progress.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/SIFT/sifter.cpp -o tmp/src/dwi/tractography/SIFT/sifter.o: In file included from src/dwi/tractography/SIFT/sifter.h:27, from src/dwi/tractography/SIFT/sifter.cpp:17: src/dwi/tractography/mapping/fixel_td_map.h: In instantiation of ‘class MR::DWI::Tractography::Mapping::Fixel_TD_map’: src/dwi/tractography/SIFT/model_base.h:124:15: required from ‘class MR::DWI::Tractography::SIFT::ModelBase’ 124 | class ModelBase : public Mapping::Fixel_TD_map | ^~~~~~~~~ src/dwi/tractography/SIFT/model.h:58:13: required from ‘class MR::DWI::Tractography::SIFT::Model’ 58 | class Model : public ModelBase | ^~~~~ src/dwi/tractography/SIFT/sifter.h:48:29: required from here 48 | class SIFTer : public Model | ^~~~~~~~~~~~ src/dwi/fixel_map.h:187:10: warning: ‘bool MR::DWI::Fixel_map::operator()(const MR::DWI::FMLS::FOD_lobes&) [with Fixel = MR::DWI::Tractography::SIFT::Fixel]’ was hidden [-Woverloaded-virtual=] 187 | bool Fixel_map::operator() (const FMLS::FOD_lobes& in) | ^~~~~~~~~~~~~~~~ In file included from src/dwi/tractography/SIFT/model_base.h:30, from src/dwi/tractography/SIFT/fixel.h:23, from src/dwi/tractography/SIFT/sifter.h:29: src/dwi/tractography/mapping/fixel_td_map.h:70:14: note: by ‘bool MR::DWI::Tractography::Mapping::Fixel_TD_map::operator()(const MR::DWI::Tractography::Mapping::SetDixel&) [with Fixel = MR::DWI::Tractography::SIFT::Fixel]’ 70 | bool Fixel_TD_map::operator() (const SetDixel& in) | ^~~~~~~~~~~~~~~~~~~ (184/548) [CC] tmp/src/gui/color_button.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/color_button.cpp -o tmp/src/gui/color_button.o (185/548) [RCC] tmp/src/gui/shview/icons.cpp rcc icons/shview.qrc -o tmp/src/gui/shview/icons.cpp (186/548) [CC] tmp/src/gui/shview/icons.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/shview/icons.cpp -o tmp/src/gui/shview/icons.o (187/548) [CC] tmp/src/gui/opengl/shader.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/opengl/shader.cpp -o tmp/src/gui/opengl/shader.o (188/548) [MOC] tmp/src/gui/lighting_dock_moc.cpp moc src/gui/lighting_dock.h -o tmp/src/gui/lighting_dock_moc.cpp (189/548) [CC] tmp/src/gui/lighting_dock_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/lighting_dock_moc.cpp -o tmp/src/gui/lighting_dock_moc.o (190/548) [CC] tmp/src/gui/opengl/gl.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/opengl/gl.cpp -o tmp/src/gui/opengl/gl.o (191/548) [CC] tmp/src/gui/opengl/gl_core_3_3.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/opengl/gl_core_3_3.cpp -o tmp/src/gui/opengl/gl_core_3_3.o (192/548) [CC] tmp/src/gui/dialog/dicom.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/dialog/dicom.cpp -o tmp/src/gui/dialog/dicom.o (193/548) [CC] tmp/src/gui/shview/file_open.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/shview/file_open.cpp -o tmp/src/gui/shview/file_open.o (194/548) [CC] tmp/src/gui/shapes/halfsphere.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/shapes/halfsphere.cpp -o tmp/src/gui/shapes/halfsphere.o (195/548) [LB] bin/mrthreshold g++ tmp/cmd/mrthreshold.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrthreshold (196/548) [CC] tmp/src/gui/shview/render_window.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/shview/render_window.cpp -o tmp/src/gui/shview/render_window.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tcksift.cpp -o tmp/cmd/tcksift.o: In file included from src/dwi/tractography/SIFT/sifter.h:27, from cmd/tcksift.cpp:27: src/dwi/tractography/mapping/fixel_td_map.h: In instantiation of ‘class MR::DWI::Tractography::Mapping::Fixel_TD_map’: src/dwi/tractography/SIFT/model_base.h:124:15: required from ‘class MR::DWI::Tractography::SIFT::ModelBase’ 124 | class ModelBase : public Mapping::Fixel_TD_map | ^~~~~~~~~ src/dwi/tractography/SIFT/model.h:58:13: required from ‘class MR::DWI::Tractography::SIFT::Model’ 58 | class Model : public ModelBase | ^~~~~ src/dwi/tractography/SIFT/sifter.h:48:29: required from here 48 | class SIFTer : public Model | ^~~~~~~~~~~~ src/dwi/fixel_map.h:187:10: warning: ‘bool MR::DWI::Fixel_map::operator()(const MR::DWI::FMLS::FOD_lobes&) [with Fixel = MR::DWI::Tractography::SIFT::Fixel]’ was hidden [-Woverloaded-virtual=] 187 | bool Fixel_map::operator() (const FMLS::FOD_lobes& in) | ^~~~~~~~~~~~~~~~ In file included from src/dwi/tractography/SIFT/model_base.h:30, from src/dwi/tractography/SIFT/fixel.h:23, from src/dwi/tractography/SIFT/sifter.h:29: src/dwi/tractography/mapping/fixel_td_map.h:70:14: note: by ‘bool MR::DWI::Tractography::Mapping::Fixel_TD_map::operator()(const MR::DWI::Tractography::Mapping::SetDixel&) [with Fixel = MR::DWI::Tractography::SIFT::Fixel]’ 70 | bool Fixel_TD_map::operator() (const SetDixel& in) | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/eigen3/Eigen/Core:294, from /usr/include/eigen3/Eigen/Geometry:11, from ./core/types.h:78, from ./core/mrtrix.h:37, from ./core/cmdline_option.h:28, from ./core/app.h:29, from ./core/command.h:25, from cmd/tcksift.cpp:17: In copy constructor ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::PlainObjectBase&) [with Derived = Eigen::Matrix]’, inlined from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>&) [with _Scalar = double; int _Rows = 3; int _Cols = 1; int _Options = 0; int _MaxRows = 3; int _MaxCols = 1]’ at /usr/include/eigen3/Eigen/src/Core/Matrix.h:414:65, inlined from ‘MR::DWI::Tractography::SIFT::FixelBase::FixelBase(const MR::DWI::Tractography::SIFT::FixelBase&)’ at src/dwi/tractography/SIFT/model_base.h:89:13, inlined from ‘MR::DWI::Tractography::SIFT::Fixel::Fixel(const MR::DWI::Tractography::SIFT::Fixel&)’ at src/dwi/tractography/SIFT/fixel.h:47:28, inlined from ‘void std::__new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = MR::DWI::Tractography::SIFT::Fixel; _Args = {MR::DWI::Tractography::SIFT::Fixel}; _Tp = MR::DWI::Tractography::SIFT::Fixel]’ at /usr/include/c++/15/bits/new_allocator.h:191:4, inlined from ‘static void std::allocator_traits >::construct(allocator_type&, _Up*, _Args&& ...) [with _Up = MR::DWI::Tractography::SIFT::Fixel; _Args = {MR::DWI::Tractography::SIFT::Fixel}; _Tp = MR::DWI::Tractography::SIFT::Fixel]’ at /usr/include/c++/15/bits/alloc_traits.h:674:17, inlined from ‘void std::vector<_Tp, _Alloc>::_M_realloc_append(_Args&& ...) [with _Args = {MR::DWI::Tractography::SIFT::Fixel}; _Tp = MR::DWI::Tractography::SIFT::Fixel; _Alloc = std::allocator]’ at /usr/include/c++/15/bits/vector.tcc:586:26, inlined from ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {MR::DWI::Tractography::SIFT::Fixel}; _Tp = MR::DWI::Tractography::SIFT::Fixel; _Alloc = std::allocator]’ at /usr/include/c++/15/bits/vector.tcc:123:21, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = MR::DWI::Tractography::SIFT::Fixel; _Alloc = std::allocator]’ at /usr/include/c++/15/bits/stl_vector.h:1434:21, inlined from ‘void MR::DWI::Tractography::SIFT::Model::remove_excluded_fixels() [with Fixel = MR::DWI::Tractography::SIFT::Fixel]’ at src/dwi/tractography/SIFT/model.h:228:30: /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:512:17: warning: ‘.MR::DWI::Tractography::SIFT::Fixel::.MR::DWI::Tractography::SIFT::FixelBase::dir.Eigen::Matrix::.Eigen::PlainObjectBase >::m_storage’ may be used uninitialized [-Wmaybe-uninitialized] 512 | : Base(), m_storage(other.m_storage) { } | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from src/dwi/tractography/SIFT/sifter.h:31: src/dwi/tractography/SIFT/model.h: In member function ‘void MR::DWI::Tractography::SIFT::Model::remove_excluded_fixels() [with Fixel = MR::DWI::Tractography::SIFT::Fixel]’: src/dwi/tractography/SIFT/model.h:228:31: note: ‘’ declared here 228 | new_fixels.push_back (Fixel()); | ^~~~~~~ In copy constructor ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::PlainObjectBase&) [with Derived = Eigen::Matrix]’, inlined from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>&) [with _Scalar = double; int _Rows = 3; int _Cols = 1; int _Options = 0; int _MaxRows = 3; int _MaxCols = 1]’ at /usr/include/eigen3/Eigen/src/Core/Matrix.h:414:65, inlined from ‘MR::DWI::Tractography::SIFT::FixelBase::FixelBase(const MR::DWI::Tractography::SIFT::FixelBase&)’ at src/dwi/tractography/SIFT/model_base.h:89:13, inlined from ‘MR::DWI::Tractography::SIFT::Fixel::Fixel(const MR::DWI::Tractography::SIFT::Fixel&)’ at src/dwi/tractography/SIFT/fixel.h:47:28, inlined from ‘void std::__new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = MR::DWI::Tractography::SIFT::Fixel; _Args = {MR::DWI::Tractography::SIFT::Fixel}; _Tp = MR::DWI::Tractography::SIFT::Fixel]’ at /usr/include/c++/15/bits/new_allocator.h:191:4, inlined from ‘static void std::allocator_traits >::construct(allocator_type&, _Up*, _Args&& ...) [with _Up = MR::DWI::Tractography::SIFT::Fixel; _Args = {MR::DWI::Tractography::SIFT::Fixel}; _Tp = MR::DWI::Tractography::SIFT::Fixel]’ at /usr/include/c++/15/bits/alloc_traits.h:674:17, inlined from ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {MR::DWI::Tractography::SIFT::Fixel}; _Tp = MR::DWI::Tractography::SIFT::Fixel; _Alloc = std::allocator]’ at /usr/include/c++/15/bits/vector.tcc:117:30, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = MR::DWI::Tractography::SIFT::Fixel; _Alloc = std::allocator]’ at /usr/include/c++/15/bits/stl_vector.h:1434:21, inlined from ‘MR::DWI::Fixel_map::Fixel_map(const MR::Header&) [with Fixel = MR::DWI::Tractography::SIFT::Fixel]’ at src/dwi/fixel_map.h:47:28, inlined from ‘MR::DWI::Tractography::Mapping::Fixel_TD_map::Fixel_TD_map(const MR::Header&, const MR::DWI::Directions::FastLookupSet&) [with Fixel = MR::DWI::Tractography::SIFT::Fixel]’ at src/dwi/tractography/mapping/fixel_td_map.h:48:31, inlined from ‘MR::DWI::Tractography::SIFT::ModelBase::ModelBase(MR::Image&, const MR::DWI::Directions::FastLookupSet&) [with Fixel = MR::DWI::Tractography::SIFT::Fixel]’ at src/dwi/tractography/SIFT/model_base.h:137:39, inlined from ‘MR::DWI::Tractography::SIFT::Model::Model(Set&, const MR::DWI::Directions::FastLookupSet&) [with Set = MR::Image; Fixel = MR::DWI::Tractography::SIFT::Fixel]’ at src/dwi/tractography/SIFT/model.h:68:42, inlined from ‘MR::DWI::Tractography::SIFT::SIFTer::SIFTer(MR::Image&, const MR::DWI::Directions::FastLookupSet&)’ at src/dwi/tractography/SIFT/sifter.h:64:39, inlined from ‘void run()’ at cmd/tcksift.cpp:91:30: /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:512:17: warning: ‘.MR::DWI::Tractography::SIFT::Fixel::.MR::DWI::Tractography::SIFT::FixelBase::dir.Eigen::Matrix::.Eigen::PlainObjectBase >::m_storage’ may be used uninitialized [-Wmaybe-uninitialized] 512 | : Base(), m_storage(other.m_storage) { } | ^~~~~~~~~~~~~~~~~~~~~~~~~~ src/dwi/fixel_map.h: In function ‘void run()’: src/dwi/fixel_map.h:47:29: note: ‘’ declared here 47 | fixels.push_back (Fixel()); | ^~~~~~~ (197/548) [LB] bin/tcksift g++ tmp/src/dwi/tractography/resampling/upsampler.o tmp/src/dwi/tractography/mapping/mapper.o tmp/src/dwi/fmls.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/mapping/mapping.o tmp/src/dwi/tractography/resampling/downsampler.o tmp/src/dwi/tractography/resampling/resampling.o tmp/src/dwi/tractography/SIFT/sifter.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/SIFT/sift.o tmp/src/dwi/tractography/mapping/voxel.o tmp/src/dwi/tractography/mapping/mapper_plugins.o tmp/src/dwi/directions/set.o tmp/src/dwi/tractography/SIFT/proc_mask.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/mapping/twi_stats.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/directions/mask.o tmp/src/dwi/tractography/resampling/fixed_step_size.o tmp/src/dwi/directions/predefined.o tmp/src/dwi/tractography/mapping/fixel_td_map.o tmp/src/exec_version.o tmp/src/dwi/tractography/resampling/arc.o tmp/src/dwi/tractography/SIFT/gradient_sort.o tmp/src/dwi/tractography/SIFT/track_contribution.o tmp/cmd/tcksift.o tmp/src/dwi/tractography/SIFT/track_index_range.o tmp/src/dwi/tractography/resampling/fixed_num_points.o tmp/src/dwi/tractography/ACT/act.o tmp/src/dwi/tractography/resampling/endpoints.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tcksift (198/548) [MOC] tmp/src/gui/shview/render_window_moc.cpp moc src/gui/shview/render_window.h -o tmp/src/gui/shview/render_window_moc.cpp (199/548) [CC] tmp/src/gui/shview/render_window_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/shview/render_window_moc.cpp -o tmp/src/gui/shview/render_window_moc.o (200/548) [CC] tmp/src/gui/lighting_dock.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/lighting_dock.cpp -o tmp/src/gui/lighting_dock.o (201/548) [CC] tmp/src/gui/projection.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/projection.cpp -o tmp/src/gui/projection.o (202/548) [CC] tmp/src/gui/dialog/report_exception.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/dialog/report_exception.cpp -o tmp/src/gui/dialog/report_exception.o (203/548) [CC] tmp/src/gui/gui.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/gui.cpp -o tmp/src/gui/gui.o (204/548) [CC] tmp/cmd/shview.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ cmd/shview.cpp -o tmp/cmd/shview.o (205/548) [CC] tmp/src/gui/dialog/list.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/dialog/list.cpp -o tmp/src/gui/dialog/list.o (206/548) [MOC] tmp/src/gui/color_button_moc.cpp moc src/gui/color_button.h -o tmp/src/gui/color_button_moc.cpp (207/548) [CC] tmp/src/gui/color_button_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/color_button_moc.cpp -o tmp/src/gui/color_button_moc.o (208/548) [CC] tmp/src/gui/dwi/render_frame.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/dwi/render_frame.cpp -o tmp/src/gui/dwi/render_frame.o (209/548) [CC] tmp/src/gui/dwi/renderer.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/dwi/renderer.cpp -o tmp/src/gui/dwi/renderer.o (210/548) [MOC] tmp/src/gui/opengl/lighting_moc.cpp moc src/gui/opengl/lighting.h -o tmp/src/gui/opengl/lighting_moc.cpp (211/548) [CC] tmp/src/gui/opengl/lighting_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/opengl/lighting_moc.cpp -o tmp/src/gui/opengl/lighting_moc.o (212/548) [MOC] tmp/src/gui/dwi/render_frame_moc.cpp moc src/gui/dwi/render_frame.h -o tmp/src/gui/dwi/render_frame_moc.cpp (213/548) [CC] tmp/src/gui/dwi/render_frame_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/dwi/render_frame_moc.cpp -o tmp/src/gui/dwi/render_frame_moc.o (214/548) [CC] tmp/src/gui/opengl/font.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/opengl/font.cpp -o tmp/src/gui/opengl/font.o (215/548) [CC] tmp/src/gui/dialog/dialog.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/dialog/dialog.cpp -o tmp/src/gui/dialog/dialog.o (216/548) [CC] tmp/src/gui/dialog/file.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/dialog/file.cpp -o tmp/src/gui/dialog/file.o (217/548) [CC] tmp/src/gui/opengl/lighting.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/opengl/lighting.cpp -o tmp/src/gui/opengl/lighting.o (218/548) [CC] tmp/cmd/tcksample.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tcksample.cpp -o tmp/cmd/tcksample.o (219/548) [CC] tmp/cmd/maskdump.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/maskdump.cpp -o tmp/cmd/maskdump.o (220/548) [CC] tmp/cmd/warpconvert.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/warpconvert.cpp -o tmp/cmd/warpconvert.o (221/548) [LB] bin/shview g++ tmp/src/gui/crosshair.o tmp/src/gui/dialog/progress.o tmp/src/gui/color_button.o tmp/src/gui/shview/icons.o tmp/src/gui/opengl/shader.o tmp/src/gui/lighting_dock_moc.o tmp/src/gui/opengl/gl.o tmp/src/gui/opengl/gl_core_3_3.o tmp/src/gui/dialog/dicom.o tmp/src/dwi/directions/set.o tmp/src/gui/shview/file_open.o tmp/src/gui/shapes/halfsphere.o tmp/src/gui/shview/render_window.o tmp/src/gui/shview/render_window_moc.o tmp/src/gui/lighting_dock.o tmp/src/dwi/directions/predefined.o tmp/src/gui/projection.o tmp/src/exec_version.o tmp/src/gui/dialog/report_exception.o tmp/src/gui/gui.o tmp/cmd/shview.o tmp/src/gui/dialog/list.o tmp/src/gui/color_button_moc.o tmp/src/gui/dwi/render_frame.o tmp/src/gui/dwi/renderer.o tmp/src/gui/opengl/lighting_moc.o tmp/src/gui/dwi/render_frame_moc.o tmp/src/gui/opengl/font.o tmp/src/gui/dialog/dialog.o tmp/src/gui/dialog/file.o tmp/src/gui/opengl/lighting.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib /usr/lib/x86_64-linux-gnu/libQt5OpenGL.so /usr/lib/x86_64-linux-gnu/libQt5Svg.so /usr/lib/x86_64-linux-gnu/libQt5Widgets.so /usr/lib/x86_64-linux-gnu/libQt5Gui.so /usr/lib/x86_64-linux-gnu/libQt5Network.so /usr/lib/x86_64-linux-gnu/libQt5Core.so -lGL -lpthread -o bin/shview (222/548) [CC] tmp/src/stats/permtest.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/stats/permtest.cpp -o tmp/src/stats/permtest.o (223/548) [LB] bin/maskdump g++ tmp/src/exec_version.o tmp/cmd/maskdump.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/maskdump (224/548) [CC] tmp/cmd/vectorstats.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/vectorstats.cpp -o tmp/cmd/vectorstats.o (225/548) [CC] tmp/cmd/fixel2peaks.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/fixel2peaks.cpp -o tmp/cmd/fixel2peaks.o (226/548) [LB] bin/vectorstats g++ tmp/src/exec_version.o tmp/src/stats/permtest.o tmp/cmd/vectorstats.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/vectorstats (227/548) [CC] tmp/cmd/mrdegibbs.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrdegibbs.cpp -o tmp/cmd/mrdegibbs.o (228/548) [LB] bin/warpconvert g++ tmp/cmd/warpconvert.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/warpconvert (229/548) [CC] tmp/cmd/mrcalc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrcalc.cpp -o tmp/cmd/mrcalc.o (230/548) [LB] bin/tcksample g++ tmp/src/dwi/tractography/resampling/upsampler.o tmp/src/dwi/tractography/mapping/mapper.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/resampling/downsampler.o tmp/src/dwi/tractography/resampling/resampling.o tmp/src/dwi/tractography/mapping/mapping.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/mapping/voxel.o tmp/src/dwi/tractography/mapping/mapper_plugins.o tmp/src/dwi/directions/set.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/mapping/twi_stats.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/resampling/fixed_step_size.o tmp/src/dwi/directions/predefined.o tmp/src/exec_version.o tmp/src/dwi/tractography/resampling/arc.o tmp/cmd/tcksample.o tmp/src/dwi/tractography/resampling/fixed_num_points.o tmp/src/dwi/tractography/resampling/endpoints.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tcksample (231/548) [CC] tmp/cmd/dwi2mask.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/dwi2mask.cpp -o tmp/cmd/dwi2mask.o (232/548) [LB] bin/fixel2peaks g++ tmp/src/exec_version.o tmp/cmd/fixel2peaks.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/fixel2peaks (233/548) [CC] tmp/cmd/peaks2amp.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/peaks2amp.cpp -o tmp/cmd/peaks2amp.o (234/548) [LB] bin/mrdegibbs g++ tmp/src/exec_version.o tmp/cmd/mrdegibbs.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrdegibbs (235/548) [CC] tmp/src/registration/transform/affine.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/registration/transform/affine.cpp -o tmp/src/registration/transform/affine.o (236/548) [LB] bin/peaks2amp g++ tmp/src/exec_version.o tmp/cmd/peaks2amp.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/peaks2amp (237/548) [CC] tmp/src/registration/linear.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/registration/linear.cpp -o tmp/src/registration/linear.o (238/548) [LB] bin/mrcalc g++ tmp/cmd/mrcalc.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrcalc (239/548) [CC] tmp/src/registration/transform/convergence_check.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/registration/transform/convergence_check.cpp -o tmp/src/registration/transform/convergence_check.o (240/548) [CC] tmp/src/registration/multi_contrast.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/registration/multi_contrast.cpp -o tmp/src/registration/multi_contrast.o (241/548) [LB] bin/dwi2mask g++ tmp/src/exec_version.o tmp/cmd/dwi2mask.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dwi2mask (242/548) [CC] tmp/src/registration/nonlinear.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/registration/nonlinear.cpp -o tmp/src/registration/nonlinear.o (243/548) [CC] tmp/src/registration/transform/initialiser_helpers.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/registration/transform/initialiser_helpers.cpp -o tmp/src/registration/transform/initialiser_helpers.o (244/548) [CC] tmp/cmd/mrregister.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrregister.cpp -o tmp/cmd/mrregister.o (245/548) [CC] tmp/src/registration/transform/rigid.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/registration/transform/rigid.cpp -o tmp/src/registration/transform/rigid.o (246/548) [CC] tmp/src/registration/transform/initialiser.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/registration/transform/initialiser.cpp -o tmp/src/registration/transform/initialiser.o (247/548) [MOC] tmp/src/gui/mrview/tool/tractography/track_scalar_file_moc.cpp moc src/gui/mrview/tool/tractography/track_scalar_file.h -o tmp/src/gui/mrview/tool/tractography/track_scalar_file_moc.cpp (248/548) [CC] tmp/src/gui/mrview/tool/tractography/track_scalar_file_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/tool/tractography/track_scalar_file_moc.cpp -o tmp/src/gui/mrview/tool/tractography/track_scalar_file_moc.o (249/548) [CC] tmp/src/gui/mrview/tool/roi_editor/item.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/roi_editor/item.cpp -o tmp/src/gui/mrview/tool/roi_editor/item.o (250/548) [CC] tmp/src/gui/mrview/colourmap_button.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/colourmap_button.cpp -o tmp/src/gui/mrview/colourmap_button.o (251/548) [MOC] tmp/src/gui/mrview/tool/connectome/connectome_moc.cpp moc src/gui/mrview/tool/connectome/connectome.h -o tmp/src/gui/mrview/tool/connectome/connectome_moc.cpp (252/548) [CC] tmp/src/gui/mrview/tool/connectome/connectome_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/tool/connectome/connectome_moc.cpp -o tmp/src/gui/mrview/tool/connectome/connectome_moc.o (253/548) [CC] tmp/src/gui/mrview/tool/roi_editor/model.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/roi_editor/model.cpp -o tmp/src/gui/mrview/tool/roi_editor/model.o (254/548) [CC] tmp/src/gui/mrview/tool/connectome/matrix_list.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/connectome/matrix_list.cpp -o tmp/src/gui/mrview/tool/connectome/matrix_list.o (255/548) [CC] tmp/src/gui/mrview/combo_box_error.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/combo_box_error.cpp -o tmp/src/gui/mrview/combo_box_error.o (256/548) [CC] tmp/src/colourmap.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/colourmap.cpp -o tmp/src/colourmap.o (257/548) [CC] tmp/src/gui/mrview/tool/connectome/selection.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/connectome/selection.cpp -o tmp/src/gui/mrview/tool/connectome/selection.o (258/548) [CC] tmp/src/gui/mrview/sync/processlock.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/sync/processlock.cpp -o tmp/src/gui/mrview/sync/processlock.o (259/548) [CC] tmp/src/gui/mrview/sync/client.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/sync/client.cpp -o tmp/src/gui/mrview/sync/client.o (260/548) [CC] tmp/src/gui/mrview/tool/connectome/connectome.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/connectome/connectome.cpp -o tmp/src/gui/mrview/tool/connectome/connectome.o (261/548) [CC] tmp/src/gui/mrview/tool/tractography/tractography.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/tractography/tractography.cpp -o tmp/src/gui/mrview/tool/tractography/tractography.o (262/548) [MOC] tmp/src/gui/mrview/tool/connectome/node_list_moc.cpp moc src/gui/mrview/tool/connectome/node_list.h -o tmp/src/gui/mrview/tool/connectome/node_list_moc.cpp (263/548) [CC] tmp/src/gui/mrview/tool/connectome/node_list_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/tool/connectome/node_list_moc.cpp -o tmp/src/gui/mrview/tool/connectome/node_list_moc.o (264/548) [MOC] tmp/src/gui/mrview/tool/tractography/tractography_moc.cpp moc src/gui/mrview/tool/tractography/tractography.h -o tmp/src/gui/mrview/tool/tractography/tractography_moc.cpp (265/548) [CC] tmp/src/gui/mrview/tool/tractography/tractography_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/tool/tractography/tractography_moc.cpp -o tmp/src/gui/mrview/tool/tractography/tractography_moc.o (266/548) [MOC] tmp/src/gui/mrview/tool/odf/odf_moc.cpp moc src/gui/mrview/tool/odf/odf.h -o tmp/src/gui/mrview/tool/odf/odf_moc.cpp (267/548) [CC] tmp/src/gui/mrview/tool/odf/odf_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/tool/odf/odf_moc.cpp -o tmp/src/gui/mrview/tool/odf/odf_moc.o (268/548) [RCC] tmp/src/gui/mrview/icons.cpp rcc icons/mrview.qrc -o tmp/src/gui/mrview/icons.cpp (269/548) [CC] tmp/src/gui/mrview/icons.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/icons.cpp -o tmp/src/gui/mrview/icons.o (270/548) [CC] tmp/src/gui/mrview/gui_image.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/gui_image.cpp -o tmp/src/gui/mrview/gui_image.o (271/548) [CC] tmp/src/gui/shapes/sphere.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/shapes/sphere.cpp -o tmp/src/gui/shapes/sphere.o (272/548) [MOC] tmp/src/gui/dialog/image_properties_moc.cpp moc src/gui/dialog/image_properties.h -o tmp/src/gui/dialog/image_properties_moc.cpp (273/548) [CC] tmp/src/gui/dialog/image_properties_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/dialog/image_properties_moc.cpp -o tmp/src/gui/dialog/image_properties_moc.o (274/548) [CC] tmp/src/gui/mrview/sync/interprocesscommunicator.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/sync/interprocesscommunicator.cpp -o tmp/src/gui/mrview/sync/interprocesscommunicator.o (275/548) [CC] tmp/src/gui/mrview/mode/base.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/mode/base.cpp -o tmp/src/gui/mrview/mode/base.o (276/548) [MOC] tmp/src/gui/mrview/combo_box_error_moc.cpp moc src/gui/mrview/combo_box_error.h -o tmp/src/gui/mrview/combo_box_error_moc.cpp (277/548) [CC] tmp/src/gui/mrview/combo_box_error_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/combo_box_error_moc.cpp -o tmp/src/gui/mrview/combo_box_error_moc.o (278/548) [MOC] tmp/src/gui/mrview/adjust_button_moc.cpp moc src/gui/mrview/adjust_button.h -o tmp/src/gui/mrview/adjust_button_moc.cpp (279/548) [CC] tmp/src/gui/mrview/adjust_button_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/adjust_button_moc.cpp -o tmp/src/gui/mrview/adjust_button_moc.o (280/548) [MOC] tmp/src/gui/mrview/tool/fixel/fixel_moc.cpp moc src/gui/mrview/tool/fixel/fixel.h -o tmp/src/gui/mrview/tool/fixel/fixel_moc.cpp (281/548) [CC] tmp/src/gui/mrview/tool/fixel/fixel_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/tool/fixel/fixel_moc.cpp -o tmp/src/gui/mrview/tool/fixel/fixel_moc.o (282/548) [MOC] tmp/src/gui/mrview/window_moc.cpp moc src/gui/mrview/window.h -o tmp/src/gui/mrview/window_moc.cpp (283/548) [CC] tmp/src/gui/mrview/window_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/window_moc.cpp -o tmp/src/gui/mrview/window_moc.o (284/548) [CC] tmp/src/gui/mrview/tool/connectome/node_overlay.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/connectome/node_overlay.cpp -o tmp/src/gui/mrview/tool/connectome/node_overlay.o (285/548) [CC] tmp/src/gui/mrview/tool/fixel/legacy.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/fixel/legacy.cpp -o tmp/src/gui/mrview/tool/fixel/legacy.o (286/548) [CC] tmp/src/gui/mrview/tool/odf/item.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/odf/item.cpp -o tmp/src/gui/mrview/tool/odf/item.o (287/548) [CC] tmp/src/gui/mrview/adjust_button.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/adjust_button.cpp -o tmp/src/gui/mrview/adjust_button.o (288/548) [CC] tmp/src/gui/mrview/tool/connectome/edge.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/connectome/edge.cpp -o tmp/src/gui/mrview/tool/connectome/edge.o (289/548) [CC] tmp/src/gui/mrview/tool/odf/odf.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/odf/odf.cpp -o tmp/src/gui/mrview/tool/odf/odf.o (290/548) [CC] tmp/src/gui/mrview/tool/odf/model.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/odf/model.cpp -o tmp/src/gui/mrview/tool/odf/model.o (291/548) [CC] tmp/src/gui/mrview/sync/localsocketreader.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/sync/localsocketreader.cpp -o tmp/src/gui/mrview/sync/localsocketreader.o (292/548) [CC] tmp/src/gui/mrview/tool/fixel/fixel.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/fixel/fixel.cpp -o tmp/src/gui/mrview/tool/fixel/fixel.o (293/548) [CC] tmp/cmd/mrview.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ cmd/mrview.cpp -o tmp/cmd/mrview.o (294/548) [MOC] tmp/src/gui/mrview/sync/interprocesscommunicator_moc.cpp moc src/gui/mrview/sync/interprocesscommunicator.h -o tmp/src/gui/mrview/sync/interprocesscommunicator_moc.cpp (295/548) [CC] tmp/src/gui/mrview/sync/interprocesscommunicator_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/sync/interprocesscommunicator_moc.cpp -o tmp/src/gui/mrview/sync/interprocesscommunicator_moc.o (296/548) [MOC] tmp/src/gui/mrview/sync/localsocketreader_moc.cpp moc src/gui/mrview/sync/localsocketreader.h -o tmp/src/gui/mrview/sync/localsocketreader_moc.cpp (297/548) [CC] tmp/src/gui/mrview/sync/localsocketreader_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/sync/localsocketreader_moc.cpp -o tmp/src/gui/mrview/sync/localsocketreader_moc.o (298/548) [MOC] tmp/src/gui/mrview/tool/tractography/tractogram_moc.cpp moc src/gui/mrview/tool/tractography/tractogram.h -o tmp/src/gui/mrview/tool/tractography/tractogram_moc.cpp (299/548) [CC] tmp/src/gui/mrview/tool/tractography/tractogram_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/tool/tractography/tractogram_moc.cpp -o tmp/src/gui/mrview/tool/tractography/tractogram_moc.o (300/548) [CC] tmp/src/gui/mrview/tool/roi_editor/roi.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/roi_editor/roi.cpp -o tmp/src/gui/mrview/tool/roi_editor/roi.o (301/548) [MOC] tmp/src/gui/mrview/mode/ortho_moc.cpp moc src/gui/mrview/mode/ortho.h -o tmp/src/gui/mrview/mode/ortho_moc.cpp (302/548) [CC] tmp/src/gui/mrview/mode/ortho_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/mode/ortho_moc.cpp -o tmp/src/gui/mrview/mode/ortho_moc.o (303/548) [CC] tmp/src/gui/mrview/tool/connectome/shaders.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/connectome/shaders.cpp -o tmp/src/gui/mrview/tool/connectome/shaders.o (304/548) [MOC] tmp/src/gui/mrview/spin_box_moc.cpp moc src/gui/mrview/spin_box.h -o tmp/src/gui/mrview/spin_box_moc.cpp (305/548) [CC] tmp/src/gui/mrview/spin_box_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/spin_box_moc.cpp -o tmp/src/gui/mrview/spin_box_moc.o (306/548) [CC] tmp/src/gui/mrview/tool/transform.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/transform.cpp -o tmp/src/gui/mrview/tool/transform.o (307/548) [CC] tmp/src/gui/dialog/opengl.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/dialog/opengl.cpp -o tmp/src/gui/dialog/opengl.o (308/548) [CC] tmp/src/gui/mrview/tool/view.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/view.cpp -o tmp/src/gui/mrview/tool/view.o (309/548) [CC] tmp/src/gui/mrview/tool/base.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/base.cpp -o tmp/src/gui/mrview/tool/base.o (310/548) [CC] tmp/src/gui/mrview/sync/syncmanager.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/sync/syncmanager.cpp -o tmp/src/gui/mrview/sync/syncmanager.o (311/548) [CC] tmp/src/gui/mrview/tool/overlay.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/overlay.cpp -o tmp/src/gui/mrview/tool/overlay.o (312/548) [CC] tmp/src/gui/shapes/cylinder.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/shapes/cylinder.cpp -o tmp/src/gui/shapes/cylinder.o (313/548) [CC] tmp/src/gui/cursor.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/cursor.cpp -o tmp/src/gui/cursor.o (314/548) [CC] tmp/src/gui/shapes/cube.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/shapes/cube.cpp -o tmp/src/gui/shapes/cube.o (315/548) [CC] tmp/src/gui/mrview/tool/connectome/colourmap_observers.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/connectome/colourmap_observers.cpp -o tmp/src/gui/mrview/tool/connectome/colourmap_observers.o (316/548) [CC] tmp/src/gui/mrview/mode/slice.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/mode/slice.cpp -o tmp/src/gui/mrview/mode/slice.o (317/548) [CC] tmp/src/gui/mrview/tool/odf/preview.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/odf/preview.cpp -o tmp/src/gui/mrview/tool/odf/preview.o (318/548) [CC] tmp/src/gui/dialog/image_properties.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/dialog/image_properties.cpp -o tmp/src/gui/dialog/image_properties.o (319/548) [CC] tmp/src/gui/mrview/tool/fixel/image4D.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/fixel/image4D.cpp -o tmp/src/gui/mrview/tool/fixel/image4D.o (320/548) [MOC] tmp/src/gui/mrview/sync/syncmanager_moc.cpp moc src/gui/mrview/sync/syncmanager.h -o tmp/src/gui/mrview/sync/syncmanager_moc.cpp (321/548) [CC] tmp/src/gui/mrview/sync/syncmanager_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/sync/syncmanager_moc.cpp -o tmp/src/gui/mrview/sync/syncmanager_moc.o (322/548) [MOC] tmp/src/gui/mrview/tool/roi_editor/roi_moc.cpp moc src/gui/mrview/tool/roi_editor/roi.h -o tmp/src/gui/mrview/tool/roi_editor/roi_moc.cpp (323/548) [CC] tmp/src/gui/mrview/tool/roi_editor/roi_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/tool/roi_editor/roi_moc.cpp -o tmp/src/gui/mrview/tool/roi_editor/roi_moc.o (324/548) [CC] tmp/src/gui/mrview/tool/roi_editor/undoentry.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/roi_editor/undoentry.cpp -o tmp/src/gui/mrview/tool/roi_editor/undoentry.o (325/548) [CC] tmp/src/gui/mrview/tool/tractography/track_scalar_file.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/tractography/track_scalar_file.cpp -o tmp/src/gui/mrview/tool/tractography/track_scalar_file.o (326/548) [CC] tmp/src/gui/mrview/tool/connectome/node_list.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/connectome/node_list.cpp -o tmp/src/gui/mrview/tool/connectome/node_list.o (327/548) [CC] tmp/src/gui/mrview/mode/volume.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/mode/volume.cpp -o tmp/src/gui/mrview/mode/volume.o (328/548) [LB] bin/mrregister g++ tmp/src/registration/transform/affine.o tmp/src/registration/linear.o tmp/src/dwi/directions/predefined.o tmp/src/registration/transform/convergence_check.o tmp/src/exec_version.o tmp/src/registration/multi_contrast.o tmp/src/registration/nonlinear.o tmp/src/registration/transform/initialiser_helpers.o tmp/cmd/mrregister.o tmp/src/registration/transform/rigid.o tmp/src/registration/transform/initialiser.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrregister (329/548) [CC] tmp/src/gui/mrview/tool/fixel/base_fixel.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/fixel/base_fixel.cpp -o tmp/src/gui/mrview/tool/fixel/base_fixel.o (330/548) [CC] tmp/src/gui/mrview/mode/lightbox.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/mode/lightbox.cpp -o tmp/src/gui/mrview/mode/lightbox.o (331/548) [MOC] tmp/src/gui/mrview/tool/view_moc.cpp moc src/gui/mrview/tool/view.h -o tmp/src/gui/mrview/tool/view_moc.cpp (332/548) [CC] tmp/src/gui/mrview/tool/view_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/tool/view_moc.cpp -o tmp/src/gui/mrview/tool/view_moc.o (333/548) [CC] tmp/src/gui/mrview/tool/tractography/tractogram.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/tractography/tractogram.cpp -o tmp/src/gui/mrview/tool/tractography/tractogram.o (334/548) [CC] tmp/src/gui/mrview/displayable.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/displayable.cpp -o tmp/src/gui/mrview/displayable.o (335/548) [MOC] tmp/src/gui/mrview/mode/lightbox_moc.cpp moc src/gui/mrview/mode/lightbox.h -o tmp/src/gui/mrview/mode/lightbox_moc.cpp (336/548) [CC] tmp/src/gui/mrview/mode/lightbox_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/mode/lightbox_moc.cpp -o tmp/src/gui/mrview/mode/lightbox_moc.o (337/548) [MOC] tmp/src/gui/mrview/displayable_moc.cpp moc src/gui/mrview/displayable.h -o tmp/src/gui/mrview/displayable_moc.cpp (338/548) [CC] tmp/src/gui/mrview/displayable_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/displayable_moc.cpp -o tmp/src/gui/mrview/displayable_moc.o (339/548) [MOC] tmp/src/gui/mrview/tool/connectome/selection_moc.cpp moc src/gui/mrview/tool/connectome/selection.h -o tmp/src/gui/mrview/tool/connectome/selection_moc.cpp (340/548) [CC] tmp/src/gui/mrview/tool/connectome/selection_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/tool/connectome/selection_moc.cpp -o tmp/src/gui/mrview/tool/connectome/selection_moc.o (341/548) [CC] tmp/src/gui/mrview/tool/screen_capture.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/screen_capture.cpp -o tmp/src/gui/mrview/tool/screen_capture.o (342/548) [CC] tmp/src/gui/mrview/tool/connectome/node.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/connectome/node.cpp -o tmp/src/gui/mrview/tool/connectome/node.o (343/548) [MOC] tmp/src/gui/mrview/tool/screen_capture_moc.cpp moc src/gui/mrview/tool/screen_capture.h -o tmp/src/gui/mrview/tool/screen_capture_moc.cpp (344/548) [CC] tmp/src/gui/mrview/tool/screen_capture_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/tool/screen_capture_moc.cpp -o tmp/src/gui/mrview/tool/screen_capture_moc.o (345/548) [CC] tmp/src/gui/mrview/file_open.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/file_open.cpp -o tmp/src/gui/mrview/file_open.o (346/548) [MOC] tmp/src/gui/mrview/tool/odf/preview_moc.cpp moc src/gui/mrview/tool/odf/preview.h -o tmp/src/gui/mrview/tool/odf/preview_moc.cpp (347/548) [CC] tmp/src/gui/mrview/tool/odf/preview_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/tool/odf/preview_moc.cpp -o tmp/src/gui/mrview/tool/odf/preview_moc.o (348/548) [CC] tmp/src/gui/mrview/mode/ortho.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/mode/ortho.cpp -o tmp/src/gui/mrview/mode/ortho.o (349/548) [MOC] tmp/src/gui/mrview/colourmap_button_moc.cpp moc src/gui/mrview/colourmap_button.h -o tmp/src/gui/mrview/colourmap_button_moc.cpp (350/548) [CC] tmp/src/gui/mrview/colourmap_button_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/colourmap_button_moc.cpp -o tmp/src/gui/mrview/colourmap_button_moc.o (351/548) [CC] tmp/src/gui/mrview/tool/fixel/directory.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/fixel/directory.cpp -o tmp/src/gui/mrview/tool/fixel/directory.o (352/548) [MOC] tmp/src/gui/mrview/tool/overlay_moc.cpp moc src/gui/mrview/tool/overlay.h -o tmp/src/gui/mrview/tool/overlay_moc.cpp (353/548) [CC] tmp/src/gui/mrview/tool/overlay_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/tool/overlay_moc.cpp -o tmp/src/gui/mrview/tool/overlay_moc.o (354/548) [CC] tmp/src/gui/mrview/colourbars.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/colourbars.cpp -o tmp/src/gui/mrview/colourbars.o (355/548) [MOC] tmp/src/gui/mrview/tool/transform_moc.cpp moc src/gui/mrview/tool/transform.h -o tmp/src/gui/mrview/tool/transform_moc.cpp (356/548) [CC] tmp/src/gui/mrview/tool/transform_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/tool/transform_moc.cpp -o tmp/src/gui/mrview/tool/transform_moc.o (357/548) [CC] tmp/src/gui/mrview/tool/connectome/file_data_vector.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/connectome/file_data_vector.cpp -o tmp/src/gui/mrview/tool/connectome/file_data_vector.o (358/548) [CC] tmp/src/gui/mrview/window.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/window.cpp -o tmp/src/gui/mrview/window.o (359/548) [CC] tmp/src/gui/mrview/volume.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/x86_64-linux-gnu/qt5 -isystem /usr/include/x86_64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/x86_64-linux-gnu/qt5/QtSvg -isystem /usr/include/x86_64-linux-gnu/qt5/QtWidgets -isystem /usr/include/x86_64-linux-gnu/qt5/QtGui -isystem /usr/include/x86_64-linux-gnu/qt5/QtNetwork -isystem /usr/include/x86_64-linux-gnu/qt5/QtCore -isystem /usr/lib/x86_64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/volume.cpp -o tmp/src/gui/mrview/volume.o (360/548) [CC] tmp/cmd/transformcompose.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/transformcompose.cpp -o tmp/cmd/transformcompose.o (361/548) [CC] tmp/src/stats/cfe.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/stats/cfe.cpp -o tmp/src/stats/cfe.o (362/548) [CC] tmp/src/fixel/matrix.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/fixel/matrix.cpp -o tmp/src/fixel/matrix.o (363/548) [LB] bin/transformcompose g++ tmp/cmd/transformcompose.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/transformcompose (364/548) [CC] tmp/cmd/fixelcfestats.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/fixelcfestats.cpp -o tmp/cmd/fixelcfestats.o (365/548) [CC] tmp/src/fixel/index_remapper.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/fixel/index_remapper.cpp -o tmp/src/fixel/index_remapper.o (366/548) [CC] tmp/src/fixel/filter/smooth.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/fixel/filter/smooth.cpp -o tmp/src/fixel/filter/smooth.o (367/548) [LB] bin/mrview g++ tmp/src/gui/dialog/progress.o tmp/src/gui/mrview/tool/tractography/track_scalar_file_moc.o tmp/src/gui/opengl/shader.o tmp/src/gui/opengl/gl.o tmp/src/gui/opengl/gl_core_3_3.o tmp/src/gui/mrview/tool/roi_editor/item.o tmp/src/surface/polygon.o tmp/src/dwi/tractography/roi.o tmp/src/gui/mrview/colourmap_button.o tmp/src/gui/mrview/tool/connectome/connectome_moc.o tmp/src/gui/mrview/tool/roi_editor/model.o tmp/src/gui/mrview/tool/connectome/matrix_list.o tmp/src/gui/mrview/combo_box_error.o tmp/src/dwi/directions/predefined.o tmp/src/connectome/lut.o tmp/src/colourmap.o tmp/src/gui/mrview/tool/connectome/selection.o tmp/src/gui/dwi/renderer.o tmp/src/gui/mrview/sync/processlock.o tmp/src/gui/mrview/sync/client.o tmp/src/gui/opengl/lighting.o tmp/src/gui/mrview/tool/connectome/connectome.o tmp/src/surface/scalar.o tmp/src/gui/mrview/tool/tractography/tractography.o tmp/src/gui/mrview/tool/connectome/node_list_moc.o tmp/src/gui/mrview/tool/tractography/tractography_moc.o tmp/src/gui/lighting_dock_moc.o tmp/src/gui/mrview/tool/odf/odf_moc.o tmp/src/gui/mrview/icons.o tmp/src/gui/dialog/dicom.o tmp/src/dwi/directions/set.o tmp/src/gui/mrview/gui_image.o tmp/src/gui/lighting_dock.o tmp/src/gui/shapes/sphere.o tmp/src/gui/dialog/image_properties_moc.o tmp/src/dwi/tractography/properties.o tmp/src/gui/mrview/sync/interprocesscommunicator.o tmp/src/gui/mrview/mode/base.o tmp/src/gui/mrview/combo_box_error_moc.o tmp/src/gui/mrview/adjust_button_moc.o tmp/src/gui/mrview/tool/fixel/fixel_moc.o tmp/src/surface/mesh_multi.o tmp/src/gui/projection.o tmp/src/gui/mrview/window_moc.o tmp/src/gui/mrview/tool/connectome/node_overlay.o tmp/src/gui/gui.o tmp/src/gui/mrview/tool/fixel/legacy.o tmp/src/gui/dialog/list.o tmp/src/gui/color_button_moc.o tmp/src/gui/mrview/tool/odf/item.o tmp/src/gui/dialog/file.o tmp/src/gui/opengl/font.o tmp/src/gui/mrview/adjust_button.o tmp/src/connectome/connectome.o tmp/src/gui/mrview/tool/connectome/edge.o tmp/src/gui/crosshair.o tmp/src/gui/color_button.o tmp/src/gui/mrview/tool/odf/odf.o tmp/src/gui/mrview/tool/odf/model.o tmp/src/gui/mrview/sync/localsocketreader.o tmp/src/dwi/tractography/file_base.o tmp/src/gui/mrview/tool/fixel/fixel.o tmp/cmd/mrview.o tmp/src/surface/mesh.o tmp/src/gui/mrview/sync/interprocesscommunicator_moc.o tmp/src/gui/mrview/sync/localsocketreader_moc.o tmp/src/gui/mrview/tool/tractography/tractogram_moc.o tmp/src/gui/mrview/tool/roi_editor/roi.o tmp/src/gui/shapes/halfsphere.o tmp/src/gui/mrview/mode/ortho_moc.o tmp/src/gui/mrview/tool/connectome/shaders.o tmp/src/gui/mrview/spin_box_moc.o tmp/src/gui/mrview/tool/transform.o tmp/src/gui/dialog/opengl.o tmp/src/gui/mrview/tool/view.o tmp/src/gui/mrview/tool/base.o tmp/src/gui/dialog/report_exception.o tmp/src/gui/mrview/sync/syncmanager.o tmp/src/gui/mrview/tool/overlay.o tmp/src/gui/shapes/cylinder.o tmp/src/gui/cursor.o tmp/src/gui/shapes/cube.o tmp/src/gui/dwi/render_frame.o tmp/src/gui/mrview/tool/connectome/colourmap_observers.o tmp/src/gui/dialog/dialog.o tmp/src/gui/mrview/mode/slice.o tmp/src/gui/mrview/tool/odf/preview.o tmp/src/gui/dialog/image_properties.o tmp/src/gui/mrview/tool/fixel/image4D.o tmp/src/gui/mrview/sync/syncmanager_moc.o tmp/src/gui/mrview/tool/roi_editor/roi_moc.o tmp/src/gui/mrview/tool/roi_editor/undoentry.o tmp/src/gui/mrview/tool/tractography/track_scalar_file.o tmp/src/gui/mrview/tool/connectome/node_list.o tmp/src/gui/mrview/mode/volume.o tmp/src/gui/mrview/tool/fixel/base_fixel.o tmp/src/gui/mrview/mode/lightbox.o tmp/src/gui/mrview/tool/view_moc.o tmp/src/dwi/tractography/rng.o tmp/src/gui/mrview/tool/tractography/tractogram.o tmp/src/gui/mrview/displayable.o tmp/src/surface/freesurfer.o tmp/src/gui/mrview/mode/lightbox_moc.o tmp/src/gui/mrview/displayable_moc.o tmp/src/gui/mrview/tool/connectome/selection_moc.o tmp/src/dwi/tractography/seeding/list.o tmp/src/gui/mrview/tool/screen_capture.o tmp/src/gui/mrview/tool/connectome/node.o tmp/src/gui/mrview/tool/screen_capture_moc.o tmp/src/gui/mrview/file_open.o tmp/src/gui/mrview/tool/odf/preview_moc.o tmp/src/gui/mrview/mode/ortho.o tmp/src/gui/mrview/colourmap_button_moc.o tmp/src/gui/mrview/tool/fixel/directory.o tmp/src/gui/mrview/tool/overlay_moc.o tmp/src/gui/mrview/colourbars.o tmp/src/exec_version.o tmp/src/gui/opengl/lighting_moc.o tmp/src/gui/mrview/tool/transform_moc.o tmp/src/gui/dwi/render_frame_moc.o tmp/src/gui/mrview/tool/connectome/file_data_vector.o tmp/src/gui/mrview/window.o tmp/src/gui/mrview/volume.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib /usr/lib/x86_64-linux-gnu/libQt5OpenGL.so /usr/lib/x86_64-linux-gnu/libQt5Svg.so /usr/lib/x86_64-linux-gnu/libQt5Widgets.so /usr/lib/x86_64-linux-gnu/libQt5Gui.so /usr/lib/x86_64-linux-gnu/libQt5Network.so /usr/lib/x86_64-linux-gnu/libQt5Core.so -lGL -lpthread -o bin/mrview (368/548) [CC] tmp/cmd/mraverageheader.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mraverageheader.cpp -o tmp/cmd/mraverageheader.o (369/548) [CC] tmp/cmd/tckdfc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tckdfc.cpp -o tmp/cmd/tckdfc.o (370/548) [CC] tmp/src/dwi/tractography/mapping/writer.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/mapping/writer.cpp -o tmp/src/dwi/tractography/mapping/writer.o (371/548) [CC] tmp/src/surface/filter/smooth.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/surface/filter/smooth.cpp -o tmp/src/surface/filter/smooth.o (372/548) [LB] bin/fixelcfestats g++ tmp/src/dwi/tractography/resampling/upsampler.o tmp/src/dwi/tractography/mapping/mapper.o tmp/src/stats/cfe.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/resampling/downsampler.o tmp/src/dwi/tractography/resampling/resampling.o tmp/src/dwi/tractography/mapping/mapping.o tmp/src/fixel/matrix.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/mapping/voxel.o tmp/src/dwi/tractography/mapping/mapper_plugins.o tmp/src/dwi/directions/set.o tmp/cmd/fixelcfestats.o tmp/src/dwi/tractography/rng.o tmp/src/fixel/index_remapper.o tmp/src/dwi/tractography/mapping/twi_stats.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/resampling/fixed_step_size.o tmp/src/dwi/directions/predefined.o tmp/src/exec_version.o tmp/src/dwi/tractography/resampling/arc.o tmp/src/fixel/filter/smooth.o tmp/src/stats/permtest.o tmp/src/dwi/tractography/resampling/fixed_num_points.o tmp/src/dwi/tractography/resampling/endpoints.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/fixelcfestats (373/548) [CC] tmp/cmd/meshfilter.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/meshfilter.cpp -o tmp/cmd/meshfilter.o (374/548) [CC] tmp/cmd/mrcheckerboardmask.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrcheckerboardmask.cpp -o tmp/cmd/mrcheckerboardmask.o (375/548) [LB] bin/meshfilter g++ tmp/src/surface/filter/smooth.o tmp/src/surface/mesh.o tmp/src/surface/polygon.o tmp/src/surface/freesurfer.o tmp/cmd/meshfilter.o tmp/src/surface/mesh_multi.o tmp/src/surface/filter/base.o tmp/src/exec_version.o tmp/src/connectome/lut.o tmp/src/surface/scalar.o tmp/src/connectome/connectome.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/meshfilter (376/548) [CC] tmp/cmd/fixelconvert.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/fixelconvert.cpp -o tmp/cmd/fixelconvert.o (377/548) [LB] bin/mrcheckerboardmask g++ tmp/src/exec_version.o tmp/cmd/mrcheckerboardmask.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrcheckerboardmask (378/548) [CC] tmp/cmd/transformconvert.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/transformconvert.cpp -o tmp/cmd/transformconvert.o (379/548) [LB] bin/mraverageheader g++ tmp/cmd/mraverageheader.o tmp/src/registration/transform/convergence_check.o tmp/src/exec_version.o tmp/src/registration/multi_contrast.o tmp/src/registration/transform/initialiser_helpers.o tmp/src/registration/transform/rigid.o tmp/src/registration/transform/initialiser.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mraverageheader (380/548) [CC] tmp/cmd/dwiextract.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/dwiextract.cpp -o tmp/cmd/dwiextract.o (381/548) [LB] bin/transformconvert g++ tmp/src/exec_version.o tmp/cmd/transformconvert.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/transformconvert (382/548) [CC] tmp/cmd/mrfilter.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrfilter.cpp -o tmp/cmd/mrfilter.o (383/548) [LB] bin/tckdfc g++ tmp/src/dwi/tractography/resampling/upsampler.o tmp/src/dwi/tractography/mapping/mapper.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/resampling/downsampler.o tmp/src/dwi/tractography/resampling/resampling.o tmp/src/dwi/tractography/mapping/mapping.o tmp/cmd/tckdfc.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/mapping/voxel.o tmp/src/dwi/tractography/mapping/mapper_plugins.o tmp/src/dwi/directions/set.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/mapping/twi_stats.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/resampling/fixed_step_size.o tmp/src/dwi/directions/predefined.o tmp/src/dwi/tractography/mapping/writer.o tmp/src/exec_version.o tmp/src/dwi/tractography/resampling/arc.o tmp/src/dwi/tractography/resampling/fixed_num_points.o tmp/src/dwi/tractography/resampling/endpoints.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tckdfc (384/548) [CC] tmp/src/stats/tfce.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/stats/tfce.cpp -o tmp/src/stats/tfce.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/stats/tfce.cpp -o tmp/src/stats/tfce.o: In file included from src/stats/tfce.h:24, from src/stats/tfce.cpp:17: src/stats/enhance.h:49:22: warning: ‘virtual void MR::Stats::EnhancerBase::operator()(in_column_type, out_column_type) const’ was hidden [-Woverloaded-virtual=] 49 | virtual void operator() (in_column_type, out_column_type) const = 0; | ^~~~~~~~ src/stats/tfce.h:51:24: note: by ‘virtual void MR::Stats::TFCE::EnhancerBase::operator()(MR::Stats::EnhancerBase::in_column_type, MR::Stats::TFCE::value_type, MR::Stats::EnhancerBase::out_column_type) const’ 51 | virtual void operator() (in_column_type /*input_statistics*/, const value_type /*threshold*/, out_column_type /*enhanced_statistics*/) const = 0; | ^~~~~~~~ (385/548) [CC] tmp/cmd/mrclusterstats.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrclusterstats.cpp -o tmp/cmd/mrclusterstats.o (386/548) [LB] bin/dwiextract g++ tmp/src/exec_version.o tmp/cmd/dwiextract.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dwiextract (387/548) [CC] tmp/src/stats/cluster.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/stats/cluster.cpp -o tmp/src/stats/cluster.o (388/548) [LB] bin/fixelconvert g++ tmp/src/exec_version.o tmp/cmd/fixelconvert.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/fixelconvert (389/548) [CC] tmp/cmd/fixel2sh.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/fixel2sh.cpp -o tmp/cmd/fixel2sh.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/stats/cluster.cpp -o tmp/src/stats/cluster.o: In file included from src/stats/tfce.h:24, from src/stats/cluster.h:23, from src/stats/cluster.cpp:17: src/stats/enhance.h:49:22: warning: ‘virtual void MR::Stats::EnhancerBase::operator()(in_column_type, out_column_type) const’ was hidden [-Woverloaded-virtual=] 49 | virtual void operator() (in_column_type, out_column_type) const = 0; | ^~~~~~~~ src/stats/tfce.h:51:24: note: by ‘virtual void MR::Stats::TFCE::EnhancerBase::operator()(MR::Stats::EnhancerBase::in_column_type, MR::Stats::TFCE::value_type, MR::Stats::EnhancerBase::out_column_type) const’ 51 | virtual void operator() (in_column_type /*input_statistics*/, const value_type /*threshold*/, out_column_type /*enhanced_statistics*/) const = 0; | ^~~~~~~~ (390/548) [CC] tmp/cmd/connectomeedit.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/connectomeedit.cpp -o tmp/cmd/connectomeedit.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/connectomeedit.cpp -o tmp/cmd/connectomeedit.o: In file included from src/connectome/enhance.h:26, from cmd/connectomeedit.cpp:18: src/stats/enhance.h:49:22: warning: ‘virtual void MR::Stats::EnhancerBase::operator()(in_column_type, out_column_type) const’ was hidden [-Woverloaded-virtual=] 49 | virtual void operator() (in_column_type, out_column_type) const = 0; | ^~~~~~~~ In file included from src/connectome/enhance.h:27: src/stats/tfce.h:51:24: note: by ‘virtual void MR::Stats::TFCE::EnhancerBase::operator()(MR::Stats::EnhancerBase::in_column_type, MR::Stats::TFCE::value_type, MR::Stats::EnhancerBase::out_column_type) const’ 51 | virtual void operator() (in_column_type /*input_statistics*/, const value_type /*threshold*/, out_column_type /*enhanced_statistics*/) const = 0; | ^~~~~~~~ (391/548) [CC] tmp/src/connectome/enhance.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/connectome/enhance.cpp -o tmp/src/connectome/enhance.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/connectome/enhance.cpp -o tmp/src/connectome/enhance.o: In file included from src/connectome/enhance.h:26, from src/connectome/enhance.cpp:17: src/stats/enhance.h:49:22: warning: ‘virtual void MR::Stats::EnhancerBase::operator()(in_column_type, out_column_type) const’ was hidden [-Woverloaded-virtual=] 49 | virtual void operator() (in_column_type, out_column_type) const = 0; | ^~~~~~~~ In file included from src/connectome/enhance.h:27: src/stats/tfce.h:51:24: note: by ‘virtual void MR::Stats::TFCE::EnhancerBase::operator()(MR::Stats::EnhancerBase::in_column_type, MR::Stats::TFCE::value_type, MR::Stats::EnhancerBase::out_column_type) const’ 51 | virtual void operator() (in_column_type /*input_statistics*/, const value_type /*threshold*/, out_column_type /*enhanced_statistics*/) const = 0; | ^~~~~~~~ (392/548) [LB] bin/connectomeedit g++ tmp/cmd/connectomeedit.o tmp/src/connectome/connectome.o tmp/src/exec_version.o tmp/src/stats/tfce.o tmp/src/connectome/enhance.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/connectomeedit (393/548) [CC] tmp/cmd/mrconvert.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrconvert.cpp -o tmp/cmd/mrconvert.o (394/548) [LB] bin/fixel2sh g++ tmp/cmd/fixel2sh.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/fixel2sh (395/548) [CC] tmp/cmd/mrmath.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrmath.cpp -o tmp/cmd/mrmath.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrclusterstats.cpp -o tmp/cmd/mrclusterstats.o: In file included from src/stats/tfce.h:24, from src/stats/cluster.h:23, from cmd/mrclusterstats.cpp:30: src/stats/enhance.h:49:22: warning: ‘virtual void MR::Stats::EnhancerBase::operator()(in_column_type, out_column_type) const’ was hidden [-Woverloaded-virtual=] 49 | virtual void operator() (in_column_type, out_column_type) const = 0; | ^~~~~~~~ src/stats/tfce.h:51:24: note: by ‘virtual void MR::Stats::TFCE::EnhancerBase::operator()(MR::Stats::EnhancerBase::in_column_type, MR::Stats::TFCE::value_type, MR::Stats::EnhancerBase::out_column_type) const’ 51 | virtual void operator() (in_column_type /*input_statistics*/, const value_type /*threshold*/, out_column_type /*enhanced_statistics*/) const = 0; | ^~~~~~~~ (396/548) [LB] bin/mrclusterstats g++ tmp/src/stats/tfce.o tmp/src/stats/permtest.o tmp/cmd/mrclusterstats.o tmp/src/exec_version.o tmp/src/stats/cluster.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrclusterstats (397/548) [CC] tmp/cmd/fod2fixel.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/fod2fixel.cpp -o tmp/cmd/fod2fixel.o (398/548) [LB] bin/fod2fixel g++ tmp/src/dwi/directions/mask.o tmp/src/dwi/directions/set.o tmp/src/dwi/directions/predefined.o tmp/src/dwi/fmls.o tmp/cmd/fod2fixel.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/fod2fixel (399/548) [CC] tmp/cmd/tsfmult.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tsfmult.cpp -o tmp/cmd/tsfmult.o (400/548) [LB] bin/mrfilter g++ tmp/src/exec_version.o tmp/cmd/mrfilter.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrfilter (401/548) [CC] tmp/cmd/warpcorrect.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/warpcorrect.cpp -o tmp/cmd/warpcorrect.o (402/548) [LB] bin/tsfmult g++ tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/src/exec_version.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/roi.o tmp/cmd/tsfmult.o tmp/src/dwi/tractography/rng.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tsfmult (403/548) [CC] tmp/cmd/warpinvert.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/warpinvert.cpp -o tmp/cmd/warpinvert.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/warpcorrect.cpp -o tmp/cmd/warpcorrect.o: In file included from /usr/include/eigen3/Eigen/Core:294, from /usr/include/eigen3/Eigen/Geometry:11, from ./core/types.h:78, from ./core/mrtrix.h:37, from ./core/cmdline_option.h:28, from ./core/app.h:29, from ./core/command.h:25, from cmd/warpcorrect.cpp:16: In copy constructor ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::PlainObjectBase&) [with Derived = Eigen::Matrix]’, inlined from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>&) [with _Scalar = float; int _Rows = 3; int _Cols = 1; int _Options = 0; int _MaxRows = 3; int _MaxCols = 1]’ at /usr/include/eigen3/Eigen/src/Core/Matrix.h:414:65, inlined from ‘BoundsCheck::BoundsCheck(const BoundsCheck&)’ at cmd/warpcorrect.cpp:53:7, inlined from ‘MR::{anonymous}::ThreadedLoopRunInner::ThreadedLoopRunInner(const MR::vector&, const MR::vector&, const Functor&, ImageType& ...) [with int N = 2; Functor = BoundsCheck; ImageType = {MR::Image, MR::Image}]’ at ./core/algo/threaded_loop.h:276:11, inlined from ‘void MR::{anonymous}::ThreadedLoopRunOuter::run(Functor&&, ImageType&& ...) [with Functor = BoundsCheck&; ImageType = {MR::Image&, MR::Image&}; OuterLoopType = MR::LoopAlongDynamicAxesProgress]’ at ./core/algo/threaded_loop.h:376:19, inlined from ‘void run()’ at cmd/warpcorrect.cpp:113:10: /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:512:17: warning: ‘func.BoundsCheck::val.Eigen::Matrix::.Eigen::PlainObjectBase >::m_storage’ may be used uninitialized [-Wmaybe-uninitialized] 512 | : Base(), m_storage(other.m_storage) { } | ^~~~~~~~~~~~~~~~~~~~~~~~~~ cmd/warpcorrect.cpp: In function ‘void run()’: cmd/warpcorrect.cpp:110:8: note: ‘func’ declared here 110 | auto func = BoundsCheck (precision, oob_vector, count); | ^~~~ (404/548) [LB] bin/warpcorrect g++ tmp/cmd/warpcorrect.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/warpcorrect (405/548) [CC] tmp/cmd/mrdump.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrdump.cpp -o tmp/cmd/mrdump.o (406/548) [LB] bin/warpinvert g++ tmp/src/exec_version.o tmp/cmd/warpinvert.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/warpinvert (407/548) [CC] tmp/cmd/dcminfo.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/dcminfo.cpp -o tmp/cmd/dcminfo.o (408/548) [LB] bin/dcminfo g++ tmp/cmd/dcminfo.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dcminfo (409/548) [CC] tmp/cmd/mrmetric.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrmetric.cpp -o tmp/cmd/mrmetric.o (410/548) [LB] bin/mrconvert g++ tmp/src/exec_version.o tmp/cmd/mrconvert.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrconvert (411/548) [CC] tmp/cmd/afdconnectivity.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/afdconnectivity.cpp -o tmp/cmd/afdconnectivity.o (412/548) [LB] bin/mrdump g++ tmp/src/exec_version.o tmp/cmd/mrdump.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrdump (413/548) [CC] tmp/cmd/dirgen.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/dirgen.cpp -o tmp/cmd/dirgen.o (414/548) [LB] bin/dirgen g++ tmp/cmd/dirgen.o tmp/src/exec_version.o tmp/src/dwi/directions/file.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dirgen (415/548) [CC] tmp/src/dwi/tractography/GT/particlegrid.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/GT/particlegrid.cpp -o tmp/src/dwi/tractography/GT/particlegrid.o (416/548) [CC] tmp/src/dwi/tractography/GT/gt.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/GT/gt.cpp -o tmp/src/dwi/tractography/GT/gt.o (417/548) [CC] tmp/cmd/tckglobal.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tckglobal.cpp -o tmp/cmd/tckglobal.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/afdconnectivity.cpp -o tmp/cmd/afdconnectivity.o: In file included from src/dwi/tractography/SIFT/model_base.h:21, from cmd/afdconnectivity.cpp:26: src/dwi/tractography/mapping/fixel_td_map.h: In instantiation of ‘class MR::DWI::Tractography::Mapping::Fixel_TD_map’: src/dwi/tractography/SIFT/model_base.h:124:15: required from ‘class MR::DWI::Tractography::SIFT::ModelBase’ 124 | class ModelBase : public Mapping::Fixel_TD_map | ^~~~~~~~~ cmd/afdconnectivity.cpp:123:57: required from here 123 | class AFDConnectivity : public DWI::Tractography::SIFT::ModelBase | ^~~~~~~~~~~~~~~~ src/dwi/fixel_map.h:187:10: warning: ‘bool MR::DWI::Fixel_map::operator()(const MR::DWI::FMLS::FOD_lobes&) [with Fixel = Fixel]’ was hidden [-Woverloaded-virtual=] 187 | bool Fixel_map::operator() (const FMLS::FOD_lobes& in) | ^~~~~~~~~~~~~~~~ In file included from src/dwi/tractography/SIFT/model_base.h:30: src/dwi/tractography/mapping/fixel_td_map.h:70:14: note: by ‘bool MR::DWI::Tractography::Mapping::Fixel_TD_map::operator()(const MR::DWI::Tractography::Mapping::SetDixel&) [with Fixel = Fixel]’ 70 | bool Fixel_TD_map::operator() (const SetDixel& in) | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/eigen3/Eigen/Core:294, from /usr/include/eigen3/Eigen/Geometry:11, from ./core/types.h:78, from ./core/mrtrix.h:37, from ./core/cmdline_option.h:28, from ./core/app.h:29, from ./core/command.h:25, from cmd/afdconnectivity.cpp:17: In copy constructor ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::PlainObjectBase&) [with Derived = Eigen::Matrix]’, inlined from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>&) [with _Scalar = double; int _Rows = 3; int _Cols = 1; int _Options = 0; int _MaxRows = 3; int _MaxCols = 1]’ at /usr/include/eigen3/Eigen/src/Core/Matrix.h:414:65, inlined from ‘MR::DWI::Tractography::SIFT::FixelBase::FixelBase(const MR::DWI::Tractography::SIFT::FixelBase&)’ at src/dwi/tractography/SIFT/model_base.h:89:13, inlined from ‘Fixel::Fixel(const Fixel&)’ at cmd/afdconnectivity.cpp:107:70, inlined from ‘void std::__new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = Fixel; _Args = {Fixel}; _Tp = Fixel]’ at /usr/include/c++/15/bits/new_allocator.h:191:4, inlined from ‘static void std::allocator_traits >::construct(allocator_type&, _Up*, _Args&& ...) [with _Up = Fixel; _Args = {Fixel}; _Tp = Fixel]’ at /usr/include/c++/15/bits/alloc_traits.h:674:17, inlined from ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {Fixel}; _Tp = Fixel; _Alloc = std::allocator]’ at /usr/include/c++/15/bits/vector.tcc:117:30, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = Fixel; _Alloc = std::allocator]’ at /usr/include/c++/15/bits/stl_vector.h:1434:21, inlined from ‘MR::DWI::Fixel_map::Fixel_map(const MR::Header&) [with Fixel = Fixel]’ at src/dwi/fixel_map.h:47:28, inlined from ‘MR::DWI::Tractography::Mapping::Fixel_TD_map::Fixel_TD_map(const MR::Header&, const MR::DWI::Directions::FastLookupSet&) [with Fixel = Fixel]’ at src/dwi/tractography/mapping/fixel_td_map.h:48:31, inlined from ‘MR::DWI::Tractography::SIFT::ModelBase::ModelBase(MR::Image&, const MR::DWI::Directions::FastLookupSet&) [with Fixel = Fixel]’ at src/dwi/tractography/SIFT/model_base.h:137:39, inlined from ‘AFDConnectivity::AFDConnectivity(MR::Image&, const MR::DWI::Directions::FastLookupSet&, const std::string&, const std::string&)’ at cmd/afdconnectivity.cpp:131:26: /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:512:17: warning: ‘.Fixel::.MR::DWI::Tractography::SIFT::FixelBase::dir.Eigen::Matrix::.Eigen::PlainObjectBase >::m_storage’ may be used uninitialized [-Wmaybe-uninitialized] 512 | : Base(), m_storage(other.m_storage) { } | ^~~~~~~~~~~~~~~~~~~~~~~~~~ src/dwi/fixel_map.h: In constructor ‘AFDConnectivity::AFDConnectivity(MR::Image&, const MR::DWI::Directions::FastLookupSet&, const std::string&, const std::string&)’: src/dwi/fixel_map.h:47:29: note: ‘’ declared here 47 | fixels.push_back (Fixel()); | ^~~~~~~ (418/548) [LB] bin/afdconnectivity g++ tmp/src/dwi/tractography/resampling/upsampler.o tmp/src/dwi/tractography/mapping/mapper.o tmp/src/dwi/fmls.o tmp/src/dwi/tractography/resampling/downsampler.o tmp/src/dwi/tractography/resampling/resampling.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/mapping/mapping.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/mapping/voxel.o tmp/src/dwi/tractography/mapping/mapper_plugins.o tmp/src/dwi/directions/set.o tmp/src/dwi/tractography/SIFT/proc_mask.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/mapping/twi_stats.o tmp/src/dwi/tractography/resampling/fixed_step_size.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/directions/mask.o tmp/src/dwi/directions/predefined.o tmp/src/dwi/tractography/mapping/fixel_td_map.o tmp/cmd/afdconnectivity.o tmp/src/exec_version.o tmp/src/dwi/tractography/resampling/arc.o tmp/src/dwi/tractography/resampling/fixed_num_points.o tmp/src/dwi/tractography/ACT/act.o tmp/src/dwi/tractography/resampling/endpoints.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/afdconnectivity (419/548) [CC] tmp/src/dwi/tractography/GT/externalenergy.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/GT/externalenergy.cpp -o tmp/src/dwi/tractography/GT/externalenergy.o (420/548) [LB] bin/mrmath g++ tmp/cmd/mrmath.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrmath (421/548) [CC] tmp/src/dwi/tractography/GT/particle.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/GT/particle.cpp -o tmp/src/dwi/tractography/GT/particle.o (422/548) [CC] tmp/src/dwi/tractography/GT/internalenergy.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/GT/internalenergy.cpp -o tmp/src/dwi/tractography/GT/internalenergy.o (423/548) [CC] tmp/src/dwi/tractography/GT/mhsampler.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/GT/mhsampler.cpp -o tmp/src/dwi/tractography/GT/mhsampler.o (424/548) [CC] tmp/cmd/dwi2fod.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/dwi2fod.cpp -o tmp/cmd/dwi2fod.o (425/548) [CC] tmp/src/dwi/sdeconv/msmt_csd.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/sdeconv/msmt_csd.cpp -o tmp/src/dwi/sdeconv/msmt_csd.o (426/548) [LB] bin/tckglobal g++ tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/GT/particlegrid.o tmp/src/dwi/tractography/GT/gt.o tmp/cmd/tckglobal.o tmp/src/dwi/tractography/GT/externalenergy.o tmp/src/dwi/tractography/file_base.o tmp/src/exec_version.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/GT/particle.o tmp/src/dwi/tractography/GT/internalenergy.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/GT/mhsampler.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tckglobal (427/548) [CC] tmp/src/dwi/sdeconv/csd.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/sdeconv/csd.cpp -o tmp/src/dwi/sdeconv/csd.o (428/548) [CC] tmp/src/dwi/tractography/editing/receiver.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/editing/receiver.cpp -o tmp/src/dwi/tractography/editing/receiver.o (429/548) [LB] bin/mrmetric g++ tmp/cmd/mrmetric.o tmp/src/registration/transform/convergence_check.o tmp/src/registration/transform/rigid.o tmp/src/exec_version.o tmp/src/registration/multi_contrast.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrmetric (430/548) [CC] tmp/src/dwi/tractography/editing/worker.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/editing/worker.cpp -o tmp/src/dwi/tractography/editing/worker.o (431/548) [CC] tmp/cmd/tckedit.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tckedit.cpp -o tmp/cmd/tckedit.o (432/548) [CC] tmp/src/dwi/tractography/editing/editing.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/editing/editing.cpp -o tmp/src/dwi/tractography/editing/editing.o (433/548) [CC] tmp/cmd/label2colour.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/label2colour.cpp -o tmp/cmd/label2colour.o (434/548) [CC] tmp/cmd/voxel2fixel.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/voxel2fixel.cpp -o tmp/cmd/voxel2fixel.o (435/548) [LB] bin/tckedit g++ tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/file_base.o tmp/src/exec_version.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/editing/receiver.o tmp/src/dwi/tractography/editing/worker.o tmp/cmd/tckedit.o tmp/src/dwi/tractography/editing/editing.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/weights.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tckedit (436/548) [CC] tmp/cmd/dirflip.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/dirflip.cpp -o tmp/cmd/dirflip.o (437/548) [LB] bin/label2colour g++ tmp/cmd/label2colour.o tmp/src/exec_version.o tmp/src/connectome/lut.o tmp/src/connectome/connectome.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/label2colour (438/548) [CC] tmp/cmd/tsfvalidate.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tsfvalidate.cpp -o tmp/cmd/tsfvalidate.o (439/548) [LB] bin/dirflip g++ tmp/cmd/dirflip.o tmp/src/exec_version.o tmp/src/dwi/directions/file.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dirflip (440/548) [CC] tmp/cmd/warp2metric.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/warp2metric.cpp -o tmp/cmd/warp2metric.o (441/548) [LB] bin/voxel2fixel g++ tmp/src/exec_version.o tmp/cmd/voxel2fixel.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/voxel2fixel (442/548) [CC] tmp/cmd/fixel2voxel.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/fixel2voxel.cpp -o tmp/cmd/fixel2voxel.o (443/548) [LB] bin/tsfvalidate g++ tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/src/exec_version.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/rng.o tmp/cmd/tsfvalidate.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tsfvalidate (444/548) [CC] tmp/cmd/meshconvert.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/meshconvert.cpp -o tmp/cmd/meshconvert.o (445/548) [LB] bin/dwi2fod g++ tmp/cmd/dwi2fod.o tmp/src/dwi/sdeconv/msmt_csd.o tmp/src/dwi/directions/predefined.o tmp/src/dwi/sdeconv/csd.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dwi2fod (446/548) [CC] tmp/cmd/tsfinfo.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tsfinfo.cpp -o tmp/cmd/tsfinfo.o (447/548) [LB] bin/meshconvert g++ tmp/src/surface/polygon.o tmp/src/surface/mesh.o tmp/src/surface/filter/vertex_transform.o tmp/cmd/meshconvert.o tmp/src/surface/freesurfer.o tmp/src/surface/mesh_multi.o tmp/src/surface/filter/base.o tmp/src/exec_version.o tmp/src/connectome/lut.o tmp/src/surface/scalar.o tmp/src/connectome/connectome.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/meshconvert (448/548) [CC] tmp/cmd/peaks2fixel.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/peaks2fixel.cpp -o tmp/cmd/peaks2fixel.o (449/548) [LB] bin/tsfinfo g++ tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/cmd/tsfinfo.o tmp/src/exec_version.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/rng.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tsfinfo (450/548) [CC] tmp/cmd/warpinit.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/warpinit.cpp -o tmp/cmd/warpinit.o (451/548) [LB] bin/warp2metric g++ tmp/src/exec_version.o tmp/cmd/warp2metric.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/warp2metric (452/548) [CC] tmp/cmd/fixel2tsf.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/fixel2tsf.cpp -o tmp/cmd/fixel2tsf.o (453/548) [LB] bin/peaks2fixel g++ tmp/src/exec_version.o tmp/cmd/peaks2fixel.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/peaks2fixel (454/548) [CC] tmp/cmd/mrgrid.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrgrid.cpp -o tmp/cmd/mrgrid.o (455/548) [LB] bin/warpinit g++ tmp/src/exec_version.o tmp/cmd/warpinit.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/warpinit (456/548) [CC] tmp/cmd/sh2response.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/sh2response.cpp -o tmp/cmd/sh2response.o (457/548) [LB] bin/fixel2voxel g++ tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/cmd/fixel2voxel.o tmp/src/exec_version.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/rng.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/fixel2voxel (458/548) [CC] tmp/cmd/dirstat.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/dirstat.cpp -o tmp/cmd/dirstat.o (459/548) [LB] bin/sh2response g++ tmp/src/exec_version.o tmp/cmd/sh2response.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/sh2response (460/548) [CC] tmp/cmd/mrcolour.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrcolour.cpp -o tmp/cmd/mrcolour.o (461/548) [LB] bin/fixel2tsf g++ tmp/src/dwi/tractography/resampling/upsampler.o tmp/src/dwi/tractography/mapping/mapper.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/resampling/downsampler.o tmp/src/dwi/tractography/resampling/resampling.o tmp/src/dwi/tractography/mapping/mapping.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/mapping/voxel.o tmp/src/dwi/tractography/mapping/mapper_plugins.o tmp/src/dwi/directions/set.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/mapping/twi_stats.o tmp/cmd/fixel2tsf.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/resampling/fixed_step_size.o tmp/src/dwi/directions/predefined.o tmp/src/exec_version.o tmp/src/dwi/tractography/resampling/arc.o tmp/src/dwi/tractography/resampling/fixed_num_points.o tmp/src/dwi/tractography/resampling/endpoints.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/fixel2tsf (462/548) [CC] tmp/src/dwi/tractography/SIFT2/streamline_stats.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/SIFT2/streamline_stats.cpp -o tmp/src/dwi/tractography/SIFT2/streamline_stats.o (463/548) [CC] tmp/src/dwi/tractography/SIFT2/line_search.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/SIFT2/line_search.cpp -o tmp/src/dwi/tractography/SIFT2/line_search.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/SIFT2/line_search.cpp -o tmp/src/dwi/tractography/SIFT2/line_search.o: In file included from src/dwi/tractography/SIFT/model.h:25, from src/dwi/tractography/SIFT2/tckfactor.h:30, from src/dwi/tractography/SIFT2/line_search.cpp:19: src/dwi/tractography/mapping/fixel_td_map.h: In instantiation of ‘class MR::DWI::Tractography::Mapping::Fixel_TD_map’: src/dwi/tractography/SIFT/model_base.h:124:15: required from ‘class MR::DWI::Tractography::SIFT::ModelBase’ 124 | class ModelBase : public Mapping::Fixel_TD_map | ^~~~~~~~~ src/dwi/tractography/SIFT/model.h:58:13: required from ‘class MR::DWI::Tractography::SIFT::Model’ 58 | class Model : public ModelBase | ^~~~~ src/dwi/tractography/SIFT2/tckfactor.h:59:38: required from here 59 | class TckFactor : public SIFT::Model | ^~~~~~~~~~~~ src/dwi/fixel_map.h:187:10: warning: ‘bool MR::DWI::Fixel_map::operator()(const MR::DWI::FMLS::FOD_lobes&) [with Fixel = MR::DWI::Tractography::SIFT2::Fixel]’ was hidden [-Woverloaded-virtual=] 187 | bool Fixel_map::operator() (const FMLS::FOD_lobes& in) | ^~~~~~~~~~~~~~~~ In file included from src/dwi/tractography/SIFT/model_base.h:30, from src/dwi/tractography/SIFT/model.h:38: src/dwi/tractography/mapping/fixel_td_map.h:70:14: note: by ‘bool MR::DWI::Tractography::Mapping::Fixel_TD_map::operator()(const MR::DWI::Tractography::Mapping::SetDixel&) [with Fixel = MR::DWI::Tractography::SIFT2::Fixel]’ 70 | bool Fixel_TD_map::operator() (const SetDixel& in) | ^~~~~~~~~~~~~~~~~~~ (464/548) [CC] tmp/src/dwi/tractography/SIFT2/fixel_updater.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/SIFT2/fixel_updater.cpp -o tmp/src/dwi/tractography/SIFT2/fixel_updater.o (465/548) [LB] bin/mrcolour g++ tmp/cmd/mrcolour.o tmp/src/exec_version.o tmp/src/colourmap.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrcolour (466/548) [CC] tmp/src/dwi/tractography/SIFT2/reg_calculator.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/SIFT2/reg_calculator.cpp -o tmp/src/dwi/tractography/SIFT2/reg_calculator.o (467/548) [LB] bin/mrgrid g++ tmp/src/exec_version.o tmp/cmd/mrgrid.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrgrid (468/548) [CC] tmp/src/dwi/tractography/SIFT2/tckfactor.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/SIFT2/tckfactor.cpp -o tmp/src/dwi/tractography/SIFT2/tckfactor.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/SIFT2/fixel_updater.cpp -o tmp/src/dwi/tractography/SIFT2/fixel_updater.o: In file included from src/dwi/tractography/SIFT/model.h:25, from src/dwi/tractography/SIFT2/tckfactor.h:30, from src/dwi/tractography/SIFT2/fixel_updater.cpp:20: src/dwi/tractography/mapping/fixel_td_map.h: In instantiation of ‘class MR::DWI::Tractography::Mapping::Fixel_TD_map’: src/dwi/tractography/SIFT/model_base.h:124:15: required from ‘class MR::DWI::Tractography::SIFT::ModelBase’ 124 | class ModelBase : public Mapping::Fixel_TD_map | ^~~~~~~~~ src/dwi/tractography/SIFT/model.h:58:13: required from ‘class MR::DWI::Tractography::SIFT::Model’ 58 | class Model : public ModelBase | ^~~~~ src/dwi/tractography/SIFT2/tckfactor.h:59:38: required from here 59 | class TckFactor : public SIFT::Model | ^~~~~~~~~~~~ src/dwi/fixel_map.h:187:10: warning: ‘bool MR::DWI::Fixel_map::operator()(const MR::DWI::FMLS::FOD_lobes&) [with Fixel = MR::DWI::Tractography::SIFT2::Fixel]’ was hidden [-Woverloaded-virtual=] 187 | bool Fixel_map::operator() (const FMLS::FOD_lobes& in) | ^~~~~~~~~~~~~~~~ In file included from src/dwi/tractography/SIFT/model_base.h:30, from src/dwi/tractography/SIFT/model.h:38: src/dwi/tractography/mapping/fixel_td_map.h:70:14: note: by ‘bool MR::DWI::Tractography::Mapping::Fixel_TD_map::operator()(const MR::DWI::Tractography::Mapping::SetDixel&) [with Fixel = MR::DWI::Tractography::SIFT2::Fixel]’ 70 | bool Fixel_TD_map::operator() (const SetDixel& in) | ^~~~~~~~~~~~~~~~~~~ (469/548) [CC] tmp/src/dwi/tractography/SIFT2/coeff_optimiser.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/SIFT2/coeff_optimiser.cpp -o tmp/src/dwi/tractography/SIFT2/coeff_optimiser.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/SIFT2/reg_calculator.cpp -o tmp/src/dwi/tractography/SIFT2/reg_calculator.o: In file included from src/dwi/tractography/SIFT/model.h:25, from src/dwi/tractography/SIFT2/tckfactor.h:30, from src/dwi/tractography/SIFT2/reg_calculator.cpp:20: src/dwi/tractography/mapping/fixel_td_map.h: In instantiation of ‘class MR::DWI::Tractography::Mapping::Fixel_TD_map’: src/dwi/tractography/SIFT/model_base.h:124:15: required from ‘class MR::DWI::Tractography::SIFT::ModelBase’ 124 | class ModelBase : public Mapping::Fixel_TD_map | ^~~~~~~~~ src/dwi/tractography/SIFT/model.h:58:13: required from ‘class MR::DWI::Tractography::SIFT::Model’ 58 | class Model : public ModelBase | ^~~~~ src/dwi/tractography/SIFT2/tckfactor.h:59:38: required from here 59 | class TckFactor : public SIFT::Model | ^~~~~~~~~~~~ src/dwi/fixel_map.h:187:10: warning: ‘bool MR::DWI::Fixel_map::operator()(const MR::DWI::FMLS::FOD_lobes&) [with Fixel = MR::DWI::Tractography::SIFT2::Fixel]’ was hidden [-Woverloaded-virtual=] 187 | bool Fixel_map::operator() (const FMLS::FOD_lobes& in) | ^~~~~~~~~~~~~~~~ In file included from src/dwi/tractography/SIFT/model_base.h:30, from src/dwi/tractography/SIFT/model.h:38: src/dwi/tractography/mapping/fixel_td_map.h:70:14: note: by ‘bool MR::DWI::Tractography::Mapping::Fixel_TD_map::operator()(const MR::DWI::Tractography::Mapping::SetDixel&) [with Fixel = MR::DWI::Tractography::SIFT2::Fixel]’ 70 | bool Fixel_TD_map::operator() (const SetDixel& in) | ^~~~~~~~~~~~~~~~~~~ (470/548) [CC] tmp/cmd/tcksift2.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tcksift2.cpp -o tmp/cmd/tcksift2.o (471/548) [LB] bin/dirstat g++ tmp/src/exec_version.o tmp/cmd/dirstat.o tmp/src/dwi/directions/file.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dirstat (472/548) [CC] tmp/cmd/mrtransform.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrtransform.cpp -o tmp/cmd/mrtransform.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/SIFT2/coeff_optimiser.cpp -o tmp/src/dwi/tractography/SIFT2/coeff_optimiser.o: In file included from src/dwi/tractography/SIFT/model.h:25, from src/dwi/tractography/SIFT2/tckfactor.h:30, from src/dwi/tractography/SIFT2/coeff_optimiser.cpp:21: src/dwi/tractography/mapping/fixel_td_map.h: In instantiation of ‘class MR::DWI::Tractography::Mapping::Fixel_TD_map’: src/dwi/tractography/SIFT/model_base.h:124:15: required from ‘class MR::DWI::Tractography::SIFT::ModelBase’ 124 | class ModelBase : public Mapping::Fixel_TD_map | ^~~~~~~~~ src/dwi/tractography/SIFT/model.h:58:13: required from ‘class MR::DWI::Tractography::SIFT::Model’ 58 | class Model : public ModelBase | ^~~~~ src/dwi/tractography/SIFT2/tckfactor.h:59:38: required from here 59 | class TckFactor : public SIFT::Model | ^~~~~~~~~~~~ src/dwi/fixel_map.h:187:10: warning: ‘bool MR::DWI::Fixel_map::operator()(const MR::DWI::FMLS::FOD_lobes&) [with Fixel = MR::DWI::Tractography::SIFT2::Fixel]’ was hidden [-Woverloaded-virtual=] 187 | bool Fixel_map::operator() (const FMLS::FOD_lobes& in) | ^~~~~~~~~~~~~~~~ In file included from src/dwi/tractography/SIFT/model_base.h:30, from src/dwi/tractography/SIFT/model.h:38: src/dwi/tractography/mapping/fixel_td_map.h:70:14: note: by ‘bool MR::DWI::Tractography::Mapping::Fixel_TD_map::operator()(const MR::DWI::Tractography::Mapping::SetDixel&) [with Fixel = MR::DWI::Tractography::SIFT2::Fixel]’ 70 | bool Fixel_TD_map::operator() (const SetDixel& in) | ^~~~~~~~~~~~~~~~~~~ (473/548) [CC] tmp/cmd/tckresample.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tckresample.cpp -o tmp/cmd/tckresample.o (474/548) [LB] bin/tckresample g++ tmp/src/dwi/tractography/resampling/upsampler.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/resampling/downsampler.o tmp/src/dwi/tractography/resampling/resampling.o tmp/src/dwi/tractography/roi.o tmp/cmd/tckresample.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/resampling/fixed_step_size.o tmp/src/exec_version.o tmp/src/dwi/tractography/resampling/arc.o tmp/src/dwi/tractography/resampling/fixed_num_points.o tmp/src/dwi/tractography/resampling/endpoints.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tckresample (475/548) [CC] tmp/cmd/dirsplit.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/dirsplit.cpp -o tmp/cmd/dirsplit.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/SIFT2/tckfactor.cpp -o tmp/src/dwi/tractography/SIFT2/tckfactor.o: In file included from src/dwi/tractography/SIFT/model.h:25, from src/dwi/tractography/SIFT2/tckfactor.h:30, from src/dwi/tractography/SIFT2/tckfactor.cpp:31: src/dwi/tractography/mapping/fixel_td_map.h: In instantiation of ‘class MR::DWI::Tractography::Mapping::Fixel_TD_map’: src/dwi/tractography/SIFT/model_base.h:124:15: required from ‘class MR::DWI::Tractography::SIFT::ModelBase’ 124 | class ModelBase : public Mapping::Fixel_TD_map | ^~~~~~~~~ src/dwi/tractography/SIFT/model.h:58:13: required from ‘class MR::DWI::Tractography::SIFT::Model’ 58 | class Model : public ModelBase | ^~~~~ src/dwi/tractography/SIFT2/tckfactor.h:59:38: required from here 59 | class TckFactor : public SIFT::Model | ^~~~~~~~~~~~ src/dwi/fixel_map.h:187:10: warning: ‘bool MR::DWI::Fixel_map::operator()(const MR::DWI::FMLS::FOD_lobes&) [with Fixel = MR::DWI::Tractography::SIFT2::Fixel]’ was hidden [-Woverloaded-virtual=] 187 | bool Fixel_map::operator() (const FMLS::FOD_lobes& in) | ^~~~~~~~~~~~~~~~ In file included from src/dwi/tractography/SIFT/model_base.h:30, from src/dwi/tractography/SIFT/model.h:38: src/dwi/tractography/mapping/fixel_td_map.h:70:14: note: by ‘bool MR::DWI::Tractography::Mapping::Fixel_TD_map::operator()(const MR::DWI::Tractography::Mapping::SetDixel&) [with Fixel = MR::DWI::Tractography::SIFT2::Fixel]’ 70 | bool Fixel_TD_map::operator() (const SetDixel& in) | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/eigen3/Eigen/Core:294, from /usr/include/eigen3/Eigen/Geometry:11, from ./core/types.h:78, from ./core/mrtrix.h:37, from ./core/cmdline_option.h:28, from ./core/app.h:29, from ./core/header.h:23, from src/dwi/tractography/SIFT2/tckfactor.cpp:17: In copy constructor ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::PlainObjectBase&) [with Derived = Eigen::Matrix]’, inlined from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>&) [with _Scalar = double; int _Rows = 3; int _Cols = 1; int _Options = 0; int _MaxRows = 3; int _MaxCols = 1]’ at /usr/include/eigen3/Eigen/src/Core/Matrix.h:414:65, inlined from ‘MR::DWI::Tractography::SIFT::FixelBase::FixelBase(const MR::DWI::Tractography::SIFT::FixelBase&)’ at src/dwi/tractography/SIFT/model_base.h:89:13, inlined from ‘MR::DWI::Tractography::SIFT2::Fixel::Fixel(const MR::DWI::Tractography::SIFT2::Fixel&)’ at src/dwi/tractography/SIFT2/fixel.h:65:31, inlined from ‘void std::__new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = MR::DWI::Tractography::SIFT2::Fixel; _Args = {MR::DWI::Tractography::SIFT2::Fixel}; _Tp = MR::DWI::Tractography::SIFT2::Fixel]’ at /usr/include/c++/15/bits/new_allocator.h:191:4, inlined from ‘static void std::allocator_traits >::construct(allocator_type&, _Up*, _Args&& ...) [with _Up = MR::DWI::Tractography::SIFT2::Fixel; _Args = {MR::DWI::Tractography::SIFT2::Fixel}; _Tp = MR::DWI::Tractography::SIFT2::Fixel]’ at /usr/include/c++/15/bits/alloc_traits.h:674:17, inlined from ‘void std::vector<_Tp, _Alloc>::_M_realloc_append(_Args&& ...) [with _Args = {MR::DWI::Tractography::SIFT2::Fixel}; _Tp = MR::DWI::Tractography::SIFT2::Fixel; _Alloc = std::allocator]’ at /usr/include/c++/15/bits/vector.tcc:586:26, inlined from ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {MR::DWI::Tractography::SIFT2::Fixel}; _Tp = MR::DWI::Tractography::SIFT2::Fixel; _Alloc = std::allocator]’ at /usr/include/c++/15/bits/vector.tcc:123:21, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = MR::DWI::Tractography::SIFT2::Fixel; _Alloc = std::allocator]’ at /usr/include/c++/15/bits/stl_vector.h:1434:21, inlined from ‘void MR::DWI::Tractography::SIFT::Model::remove_excluded_fixels() [with Fixel = MR::DWI::Tractography::SIFT2::Fixel]’ at src/dwi/tractography/SIFT/model.h:228:30: /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:512:17: warning: ‘.MR::DWI::Tractography::SIFT2::Fixel::.MR::DWI::Tractography::SIFT::FixelBase::dir.Eigen::Matrix::.Eigen::PlainObjectBase >::m_storage’ may be used uninitialized [-Wmaybe-uninitialized] 512 | : Base(), m_storage(other.m_storage) { } | ^~~~~~~~~~~~~~~~~~~~~~~~~~ src/dwi/tractography/SIFT/model.h: In member function ‘void MR::DWI::Tractography::SIFT::Model::remove_excluded_fixels() [with Fixel = MR::DWI::Tractography::SIFT2::Fixel]’: src/dwi/tractography/SIFT/model.h:228:31: note: ‘’ declared here 228 | new_fixels.push_back (Fixel()); | ^~~~~~~ (476/548) [CC] tmp/cmd/connectomestats.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/connectomestats.cpp -o tmp/cmd/connectomestats.o (477/548) [LB] bin/dirsplit g++ tmp/cmd/dirsplit.o tmp/src/exec_version.o tmp/src/dwi/directions/file.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dirsplit (478/548) [CC] tmp/cmd/transformcalc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/transformcalc.cpp -o tmp/cmd/transformcalc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tcksift2.cpp -o tmp/cmd/tcksift2.o: In file included from src/dwi/tractography/mapping/fixel_td_map.h:21, from cmd/tcksift2.cpp:26: src/dwi/tractography/mapping/fixel_td_map.h: In instantiation of ‘class MR::DWI::Tractography::Mapping::Fixel_TD_map’: src/dwi/tractography/SIFT/model_base.h:124:15: required from ‘class MR::DWI::Tractography::SIFT::ModelBase’ 124 | class ModelBase : public Mapping::Fixel_TD_map | ^~~~~~~~~ src/dwi/tractography/SIFT/model.h:58:13: required from ‘class MR::DWI::Tractography::SIFT::Model’ 58 | class Model : public ModelBase | ^~~~~ src/dwi/tractography/SIFT2/tckfactor.h:59:38: required from here 59 | class TckFactor : public SIFT::Model | ^~~~~~~~~~~~ src/dwi/fixel_map.h:187:10: warning: ‘bool MR::DWI::Fixel_map::operator()(const MR::DWI::FMLS::FOD_lobes&) [with Fixel = MR::DWI::Tractography::SIFT2::Fixel]’ was hidden [-Woverloaded-virtual=] 187 | bool Fixel_map::operator() (const FMLS::FOD_lobes& in) | ^~~~~~~~~~~~~~~~ src/dwi/tractography/mapping/fixel_td_map.h:70:14: note: by ‘bool MR::DWI::Tractography::Mapping::Fixel_TD_map::operator()(const MR::DWI::Tractography::Mapping::SetDixel&) [with Fixel = MR::DWI::Tractography::SIFT2::Fixel]’ 70 | bool Fixel_TD_map::operator() (const SetDixel& in) | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/eigen3/Eigen/Core:294, from /usr/include/eigen3/Eigen/Geometry:11, from ./core/types.h:78, from ./core/mrtrix.h:37, from ./core/cmdline_option.h:28, from ./core/app.h:29, from ./core/command.h:25, from cmd/tcksift2.cpp:17: In copy constructor ‘Eigen::PlainObjectBase::PlainObjectBase(const Eigen::PlainObjectBase&) [with Derived = Eigen::Matrix]’, inlined from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>&) [with _Scalar = double; int _Rows = 3; int _Cols = 1; int _Options = 0; int _MaxRows = 3; int _MaxCols = 1]’ at /usr/include/eigen3/Eigen/src/Core/Matrix.h:414:65, inlined from ‘MR::DWI::Tractography::SIFT::FixelBase::FixelBase(const MR::DWI::Tractography::SIFT::FixelBase&)’ at src/dwi/tractography/SIFT/model_base.h:89:13, inlined from ‘MR::DWI::Tractography::SIFT2::Fixel::Fixel(const MR::DWI::Tractography::SIFT2::Fixel&)’ at src/dwi/tractography/SIFT2/fixel.h:65:31, inlined from ‘void std::__new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = MR::DWI::Tractography::SIFT2::Fixel; _Args = {MR::DWI::Tractography::SIFT2::Fixel}; _Tp = MR::DWI::Tractography::SIFT2::Fixel]’ at /usr/include/c++/15/bits/new_allocator.h:191:4, inlined from ‘static void std::allocator_traits >::construct(allocator_type&, _Up*, _Args&& ...) [with _Up = MR::DWI::Tractography::SIFT2::Fixel; _Args = {MR::DWI::Tractography::SIFT2::Fixel}; _Tp = MR::DWI::Tractography::SIFT2::Fixel]’ at /usr/include/c++/15/bits/alloc_traits.h:674:17, inlined from ‘void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {MR::DWI::Tractography::SIFT2::Fixel}; _Tp = MR::DWI::Tractography::SIFT2::Fixel; _Alloc = std::allocator]’ at /usr/include/c++/15/bits/vector.tcc:117:30, inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = MR::DWI::Tractography::SIFT2::Fixel; _Alloc = std::allocator]’ at /usr/include/c++/15/bits/stl_vector.h:1434:21, inlined from ‘MR::DWI::Fixel_map::Fixel_map(const MR::Header&) [with Fixel = MR::DWI::Tractography::SIFT2::Fixel]’ at src/dwi/fixel_map.h:47:28, inlined from ‘MR::DWI::Tractography::Mapping::Fixel_TD_map::Fixel_TD_map(const MR::Header&, const MR::DWI::Directions::FastLookupSet&) [with Fixel = MR::DWI::Tractography::SIFT2::Fixel]’ at src/dwi/tractography/mapping/fixel_td_map.h:48:31, inlined from ‘MR::DWI::Tractography::SIFT::ModelBase::ModelBase(MR::Image&, const MR::DWI::Directions::FastLookupSet&) [with Fixel = MR::DWI::Tractography::SIFT2::Fixel]’ at src/dwi/tractography/SIFT/model_base.h:137:39, inlined from ‘MR::DWI::Tractography::SIFT::Model::Model(Set&, const MR::DWI::Directions::FastLookupSet&) [with Set = MR::Image; Fixel = MR::DWI::Tractography::SIFT2::Fixel]’ at src/dwi/tractography/SIFT/model.h:68:42, inlined from ‘MR::DWI::Tractography::SIFT2::TckFactor::TckFactor(MR::Image&, const MR::DWI::Directions::FastLookupSet&)’ at src/dwi/tractography/SIFT2/tckfactor.h:74:35, inlined from ‘void run()’ at cmd/tcksift2.cpp:165:36: /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:512:17: warning: ‘.MR::DWI::Tractography::SIFT2::Fixel::.MR::DWI::Tractography::SIFT::FixelBase::dir.Eigen::Matrix::.Eigen::PlainObjectBase >::m_storage’ may be used uninitialized [-Wmaybe-uninitialized] 512 | : Base(), m_storage(other.m_storage) { } | ^~~~~~~~~~~~~~~~~~~~~~~~~~ src/dwi/fixel_map.h: In function ‘void run()’: src/dwi/fixel_map.h:47:29: note: ‘’ declared here 47 | fixels.push_back (Fixel()); | ^~~~~~~ (479/548) [LB] bin/tcksift2 g++ tmp/src/dwi/tractography/resampling/upsampler.o tmp/src/dwi/tractography/mapping/mapper.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/mapping/mapping.o tmp/src/dwi/tractography/resampling/downsampler.o tmp/src/dwi/tractography/resampling/resampling.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/mapping/mapper_plugins.o tmp/src/dwi/tractography/SIFT2/streamline_stats.o tmp/src/dwi/tractography/SIFT/proc_mask.o tmp/src/dwi/directions/predefined.o tmp/src/dwi/tractography/resampling/arc.o tmp/src/dwi/tractography/SIFT/track_contribution.o tmp/src/dwi/tractography/SIFT2/line_search.o tmp/src/dwi/tractography/resampling/endpoints.o tmp/src/dwi/tractography/SIFT2/fixel_updater.o tmp/src/dwi/tractography/SIFT2/reg_calculator.o tmp/src/dwi/fmls.o tmp/src/dwi/tractography/SIFT2/tckfactor.o tmp/src/dwi/tractography/SIFT/sift.o tmp/src/dwi/tractography/mapping/voxel.o tmp/src/dwi/directions/set.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/SIFT2/coeff_optimiser.o tmp/src/dwi/tractography/mapping/twi_stats.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/directions/mask.o tmp/src/dwi/tractography/resampling/fixed_step_size.o tmp/src/dwi/tractography/mapping/fixel_td_map.o tmp/src/exec_version.o tmp/cmd/tcksift2.o tmp/src/dwi/tractography/SIFT/track_index_range.o tmp/src/dwi/tractography/resampling/fixed_num_points.o tmp/src/dwi/tractography/ACT/act.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tcksift2 (480/548) [CC] tmp/cmd/mrcentroid.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrcentroid.cpp -o tmp/cmd/mrcentroid.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/connectomestats.cpp -o tmp/cmd/connectomestats.o: In file included from src/connectome/enhance.h:26, from cmd/connectomestats.cpp:28: src/stats/enhance.h:49:22: warning: ‘virtual void MR::Stats::EnhancerBase::operator()(in_column_type, out_column_type) const’ was hidden [-Woverloaded-virtual=] 49 | virtual void operator() (in_column_type, out_column_type) const = 0; | ^~~~~~~~ In file included from src/connectome/enhance.h:27: src/stats/tfce.h:51:24: note: by ‘virtual void MR::Stats::TFCE::EnhancerBase::operator()(MR::Stats::EnhancerBase::in_column_type, MR::Stats::TFCE::value_type, MR::Stats::EnhancerBase::out_column_type) const’ 51 | virtual void operator() (in_column_type /*input_statistics*/, const value_type /*threshold*/, out_column_type /*enhanced_statistics*/) const = 0; | ^~~~~~~~ (481/548) [LB] bin/connectomestats g++ tmp/src/stats/permtest.o tmp/cmd/connectomestats.o tmp/src/connectome/connectome.o tmp/src/exec_version.o tmp/src/stats/tfce.o tmp/src/connectome/enhance.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/connectomestats (482/548) [CC] tmp/cmd/dwi2tensor.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/dwi2tensor.cpp -o tmp/cmd/dwi2tensor.o (483/548) [LB] bin/mrcentroid g++ tmp/cmd/mrcentroid.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrcentroid (484/548) [CC] tmp/cmd/fixelreorient.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/fixelreorient.cpp -o tmp/cmd/fixelreorient.o (485/548) [LB] bin/dwi2tensor g++ tmp/src/exec_version.o tmp/cmd/dwi2tensor.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dwi2tensor (486/548) [CC] tmp/cmd/labelstats.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/labelstats.cpp -o tmp/cmd/labelstats.o (487/548) [LB] bin/fixelreorient g++ tmp/src/exec_version.o tmp/cmd/fixelreorient.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/fixelreorient (488/548) [CC] tmp/cmd/5tt2vis.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/5tt2vis.cpp -o tmp/cmd/5tt2vis.o (489/548) [LB] bin/labelstats g++ tmp/cmd/labelstats.o tmp/src/exec_version.o tmp/src/connectome/connectome.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/labelstats (490/548) [CC] tmp/cmd/fixelcorrespondence.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/fixelcorrespondence.cpp -o tmp/cmd/fixelcorrespondence.o (491/548) [LB] bin/5tt2vis g++ tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/ACT/act.o tmp/src/dwi/tractography/rng.o tmp/src/exec_version.o tmp/cmd/5tt2vis.o tmp/src/dwi/tractography/roi.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/5tt2vis (492/548) [CC] tmp/cmd/tsfthreshold.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tsfthreshold.cpp -o tmp/cmd/tsfthreshold.o (493/548) [LB] bin/tsfthreshold g++ tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/src/exec_version.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/roi.o tmp/cmd/tsfthreshold.o tmp/src/dwi/tractography/rng.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tsfthreshold (494/548) [CC] tmp/src/dwi/tractography/mapping/gaussian/mapper.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/mapping/gaussian/mapper.cpp -o tmp/src/dwi/tractography/mapping/gaussian/mapper.o (495/548) [LB] bin/transformcalc g++ tmp/cmd/transformcalc.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/transformcalc (496/548) [CC] tmp/cmd/tckmap.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tckmap.cpp -o tmp/cmd/tckmap.o (497/548) [CC] tmp/cmd/labelconvert.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/labelconvert.cpp -o tmp/cmd/labelconvert.o (498/548) [LB] bin/fixelcorrespondence g++ tmp/src/exec_version.o tmp/cmd/fixelcorrespondence.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/fixelcorrespondence (499/548) [CC] tmp/cmd/shconv.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/shconv.cpp -o tmp/cmd/shconv.o (500/548) [LB] bin/labelconvert g++ tmp/cmd/labelconvert.o tmp/src/exec_version.o tmp/src/connectome/lut.o tmp/src/connectome/connectome.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/labelconvert (501/548) [CC] tmp/cmd/fixelconnectivity.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/fixelconnectivity.cpp -o tmp/cmd/fixelconnectivity.o (502/548) [LB] bin/shconv g++ tmp/src/exec_version.o tmp/cmd/shconv.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/shconv (503/548) [CC] tmp/cmd/amp2sh.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/amp2sh.cpp -o tmp/cmd/amp2sh.o (504/548) [LB] bin/fixelconnectivity g++ tmp/src/dwi/tractography/resampling/upsampler.o tmp/src/dwi/tractography/mapping/mapper.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/resampling/downsampler.o tmp/src/dwi/tractography/resampling/resampling.o tmp/src/dwi/tractography/mapping/mapping.o tmp/src/fixel/matrix.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/mapping/voxel.o tmp/src/dwi/tractography/mapping/mapper_plugins.o tmp/src/dwi/directions/set.o tmp/src/dwi/tractography/rng.o tmp/src/fixel/index_remapper.o tmp/src/dwi/tractography/mapping/twi_stats.o tmp/cmd/fixelconnectivity.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/resampling/fixed_step_size.o tmp/src/dwi/directions/predefined.o tmp/src/exec_version.o tmp/src/dwi/tractography/resampling/arc.o tmp/src/dwi/tractography/resampling/fixed_num_points.o tmp/src/dwi/tractography/resampling/endpoints.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/fixelconnectivity (505/548) [CC] tmp/cmd/tckstats.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tckstats.cpp -o tmp/cmd/tckstats.o (506/548) [LB] bin/tckstats g++ tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/cmd/tckstats.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/rng.o tmp/src/exec_version.o tmp/src/dwi/tractography/weights.o tmp/src/dwi/tractography/roi.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tckstats (507/548) [CC] tmp/cmd/tck2fixel.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tck2fixel.cpp -o tmp/cmd/tck2fixel.o (508/548) [LB] bin/mrtransform g++ tmp/src/exec_version.o tmp/cmd/mrtransform.o tmp/src/dwi/directions/predefined.o tmp/src/registration/multi_contrast.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrtransform (509/548) [CC] tmp/cmd/mrhistogram.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrhistogram.cpp -o tmp/cmd/mrhistogram.o (510/548) [LB] bin/amp2sh g++ tmp/cmd/amp2sh.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/amp2sh (511/548) [CC] tmp/cmd/maskfilter.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/maskfilter.cpp -o tmp/cmd/maskfilter.o (512/548) [LB] bin/mrhistogram g++ tmp/src/exec_version.o tmp/cmd/mrhistogram.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrhistogram (513/548) [CC] tmp/cmd/5ttedit.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/5ttedit.cpp -o tmp/cmd/5ttedit.o (514/548) [LB] bin/tck2fixel g++ tmp/src/dwi/tractography/resampling/upsampler.o tmp/src/dwi/tractography/mapping/mapper.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/resampling/downsampler.o tmp/src/dwi/tractography/resampling/resampling.o tmp/src/dwi/tractography/mapping/mapping.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/mapping/voxel.o tmp/src/dwi/tractography/mapping/mapper_plugins.o tmp/src/dwi/directions/set.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/mapping/twi_stats.o tmp/src/dwi/tractography/seeding/list.o tmp/cmd/tck2fixel.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/resampling/fixed_step_size.o tmp/src/dwi/directions/predefined.o tmp/src/dwi/tractography/mapping/writer.o tmp/src/exec_version.o tmp/src/dwi/tractography/resampling/arc.o tmp/src/dwi/tractography/resampling/fixed_num_points.o tmp/src/dwi/tractography/resampling/endpoints.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tck2fixel (515/548) [CC] tmp/src/fixel/filter/connect.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/fixel/filter/connect.cpp -o tmp/src/fixel/filter/connect.o (516/548) [LB] bin/5ttedit g++ tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/cmd/5ttedit.o tmp/src/dwi/tractography/ACT/act.o tmp/src/dwi/tractography/rng.o tmp/src/exec_version.o tmp/src/dwi/tractography/roi.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/5ttedit (517/548) [CC] tmp/cmd/fixelfilter.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/fixelfilter.cpp -o tmp/cmd/fixelfilter.o (518/548) [LB] bin/maskfilter g++ tmp/src/exec_version.o tmp/cmd/maskfilter.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/maskfilter (519/548) [CC] tmp/cmd/dcmedit.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/dcmedit.cpp -o tmp/cmd/dcmedit.o (520/548) [LB] bin/tckmap g++ tmp/src/dwi/tractography/resampling/upsampler.o tmp/src/dwi/tractography/mapping/mapper.o tmp/src/dwi/tractography/mapping/gaussian/mapper.o tmp/src/dwi/tractography/resampling/downsampler.o tmp/src/dwi/tractography/resampling/resampling.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/mapping/mapping.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/mapping/voxel.o tmp/src/dwi/tractography/mapping/mapper_plugins.o tmp/src/dwi/directions/set.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/weights.o tmp/src/dwi/tractography/mapping/twi_stats.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/resampling/fixed_step_size.o tmp/src/dwi/directions/predefined.o tmp/cmd/tckmap.o tmp/src/exec_version.o tmp/src/dwi/tractography/resampling/arc.o tmp/src/dwi/tractography/mapping/writer.o tmp/src/dwi/tractography/resampling/fixed_num_points.o tmp/src/dwi/tractography/resampling/endpoints.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tckmap (521/548) [CC] tmp/cmd/tsfdivide.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tsfdivide.cpp -o tmp/cmd/tsfdivide.o (522/548) [CC] tmp/cmd/tckinfo.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tckinfo.cpp -o tmp/cmd/tckinfo.o (523/548) [LB] bin/dcmedit g++ tmp/cmd/dcmedit.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dcmedit (524/548) [CC] tmp/cmd/mrcat.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrcat.cpp -o tmp/cmd/mrcat.o (525/548) [LB] bin/tsfdivide g++ tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/src/exec_version.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/roi.o tmp/cmd/tsfdivide.o tmp/src/dwi/tractography/rng.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tsfdivide (526/548) [CC] tmp/cmd/connectome2tck.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/connectome2tck.cpp -o tmp/cmd/connectome2tck.o (527/548) [LB] bin/tckinfo g++ tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/cmd/tckinfo.o tmp/src/exec_version.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/rng.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tckinfo (528/548) [CC] tmp/src/dwi/tractography/connectome/exemplar.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/connectome/exemplar.cpp -o tmp/src/dwi/tractography/connectome/exemplar.o (529/548) [CC] tmp/src/dwi/tractography/connectome/extract.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/connectome/extract.cpp -o tmp/src/dwi/tractography/connectome/extract.o (530/548) [LB] bin/fixelfilter g++ tmp/src/dwi/tractography/resampling/upsampler.o tmp/src/dwi/tractography/mapping/mapper.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/resampling/downsampler.o tmp/src/dwi/tractography/resampling/resampling.o tmp/src/dwi/tractography/mapping/mapping.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/mapping/mapper_plugins.o tmp/src/dwi/directions/predefined.o tmp/src/dwi/tractography/resampling/arc.o tmp/src/fixel/filter/smooth.o tmp/src/dwi/tractography/resampling/endpoints.o tmp/src/stats/cfe.o tmp/src/fixel/matrix.o tmp/src/dwi/tractography/mapping/voxel.o tmp/src/dwi/directions/set.o tmp/src/dwi/tractography/rng.o tmp/src/fixel/index_remapper.o tmp/src/dwi/tractography/mapping/twi_stats.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/resampling/fixed_step_size.o tmp/src/fixel/filter/connect.o tmp/src/exec_version.o tmp/cmd/fixelfilter.o tmp/src/dwi/tractography/resampling/fixed_num_points.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/fixelfilter (531/548) [CC] tmp/cmd/mtnormalise.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mtnormalise.cpp -o tmp/cmd/mtnormalise.o (532/548) [CC] tmp/cmd/5tt2gmwmi.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/5tt2gmwmi.cpp -o tmp/cmd/5tt2gmwmi.o (533/548) [LB] bin/connectome2tck g++ tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/cmd/connectome2tck.o tmp/src/dwi/tractography/connectome/tck2nodes.o tmp/src/dwi/tractography/file_base.o tmp/src/exec_version.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/connectome/connectome.o tmp/src/dwi/tractography/connectome/exemplar.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/connectome/extract.o tmp/src/dwi/tractography/weights.o tmp/src/connectome/connectome.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/connectome2tck (534/548) [CC] tmp/cmd/dwidenoise.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/dwidenoise.cpp -o tmp/cmd/dwidenoise.o (535/548) [LB] bin/mrcat g++ tmp/cmd/mrcat.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrcat (536/548) [LB] bin/5tt2gmwmi g++ tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/ACT/act.o tmp/cmd/5tt2gmwmi.o tmp/src/exec_version.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/rng.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/5tt2gmwmi (537/548) [CC] tmp/cmd/mrinfo.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrinfo.cpp -o tmp/cmd/mrinfo.o (538/548) [CC] tmp/cmd/label2mesh.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/label2mesh.cpp -o tmp/cmd/label2mesh.o (539/548) [LB] bin/mrinfo g++ tmp/src/exec_version.o tmp/cmd/mrinfo.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrinfo (540/548) [CC] tmp/cmd/tckconvert.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tckconvert.cpp -o tmp/cmd/tckconvert.o (541/548) [LB] bin/mtnormalise g++ tmp/src/exec_version.o tmp/cmd/mtnormalise.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mtnormalise (542/548) [CC] tmp/cmd/dirmerge.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/dirmerge.cpp -o tmp/cmd/dirmerge.o (543/548) [LB] bin/label2mesh g++ tmp/src/surface/mesh_multi.o tmp/src/exec_version.o tmp/src/connectome/lut.o tmp/src/surface/mesh.o tmp/src/surface/polygon.o tmp/cmd/label2mesh.o tmp/src/surface/freesurfer.o tmp/src/surface/scalar.o tmp/src/connectome/connectome.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/label2mesh (544/548) [CC] tmp/cmd/amp2response.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -mmmx -msse -msse2 -mfpmath=sse -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -mmmx -msse -msse2 -mfpmath=sse -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/x86_64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/amp2response.cpp -o tmp/cmd/amp2response.o (545/548) [LB] bin/dirmerge g++ tmp/src/dwi/directions/file.o tmp/cmd/dirmerge.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dirmerge (546/548) [LB] bin/tckconvert g++ tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/src/exec_version.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/roi.o tmp/cmd/tckconvert.o tmp/src/dwi/tractography/rng.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tckconvert (547/548) [LB] bin/amp2response g++ tmp/src/exec_version.o tmp/cmd/amp2response.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/amp2response (548/548) [LB] bin/dwidenoise g++ tmp/src/exec_version.o tmp/cmd/dwidenoise.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dwidenoise make[1]: Leaving directory '/build/reproducible-path/mrtrix3-3.0.8' create-stamp debian/debhelper-build-stamp dh_prep -a debian/rules override_dh_install make[1]: Entering directory '/build/reproducible-path/mrtrix3-3.0.8' dh_install # Remove __pycache__ dirs that were created in build time tests find debian -name __pycache__ -type d | xargs rm -rf make[1]: Leaving directory '/build/reproducible-path/mrtrix3-3.0.8' dh_installdocs -a dh_installchangelogs -a dh_installman -a dh_perl -a debian/rules override_dh_link make[1]: Entering directory '/build/reproducible-path/mrtrix3-3.0.8' cp debian/mrtrix3.links.in debian/mrtrix3.links : # Generate symlinks for all the mr* commands for f in debian/mrtrix3/usr/lib/mrtrix3/bin/*; do \ bn=$(basename $f); \ if [ "$bn" = "dirsplit" ]; then \ continue; \ fi; \ echo "usr/lib/mrtrix3/bin/$bn usr/bin/$bn" >> debian/mrtrix3.links; \ echo "/usr/share/man/man1/mrtrix3.1.gz /usr/share/man/man1/$bn.1.gz" >> debian/mrtrix3.links; \ done echo "/usr/share/mrtrix3/matlab /usr/share/matlab/site/m/mrtrix" >> debian/mrtrix3.links echo "/usr/share/mrtrix3/matlab /usr/share/octave/site/m/mrtrix" >> debian/mrtrix3.links dh_link make[1]: Leaving directory '/build/reproducible-path/mrtrix3-3.0.8' dh_strip_nondeterminism -a debian/rules override_dh_compress make[1]: Entering directory '/build/reproducible-path/mrtrix3-3.0.8' dh_compress -X.html make[1]: Leaving directory '/build/reproducible-path/mrtrix3-3.0.8' dh_fixperms -a dh_missing -a dh_dwz -a dh_strip -a dh_makeshlibs -a debian/rules override_dh_shlibdeps make[1]: Entering directory '/build/reproducible-path/mrtrix3-3.0.8' dh_shlibdeps -l /build/reproducible-path/mrtrix3-3.0.8/lib dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib64/ld-linux-x86-64.so.2 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib64/ld-linux-x86-64.so.2.usr-is-merged make[1]: Leaving directory '/build/reproducible-path/mrtrix3-3.0.8' dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'mrtrix3-dbgsym' in '../mrtrix3-dbgsym_3.0.8-1_amd64.deb'. dpkg-deb: building package 'mrtrix3' in '../mrtrix3_3.0.8-1_amd64.deb'. dpkg-genbuildinfo --build=any -O../mrtrix3_3.0.8-1_amd64.buildinfo dpkg-genchanges --build=any -O../mrtrix3_3.0.8-1_amd64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2025-12-17T22:10:52Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes Wed, 17 Dec 2025 22:10:53 +0000 | +------------------------------------------------------------------------------+ mrtrix3_3.0.8-1_amd64.changes: ------------------------------ Format: 1.8 Date: Wed, 17 Dec 2025 14:44:48 +0100 Source: mrtrix3 Binary: mrtrix3 mrtrix3-dbgsym Architecture: amd64 Version: 3.0.8-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: mrtrix3 - diffusion-weighted MRI white matter tractography Closes: 1114646 1123518 Changes: mrtrix3 (3.0.8-1) unstable; urgency=medium . * Team upload. * New upstream version Closes: #1123518 * d/watch: version=5 * Standards-Version: 4.7.2 (routine-update) * Replace transitional package pkg-config by pkgconf in Build-Depends (routine-update) * d/copyright: review * Build-Conflicts: clang Closes: #1114646 * Do not run Salsa CI for i386 Checksums-Sha1: 3f1338dd7a29e5d8ba5b3a48f20b925e8651c5f5 499405744 mrtrix3-dbgsym_3.0.8-1_amd64.deb ab2707dad3bb922f95298317033b3debd5b2d2fb 15339 mrtrix3_3.0.8-1_amd64.buildinfo e1ebf9d7eac2a7ad24609667fc6438acd63abce2 10237768 mrtrix3_3.0.8-1_amd64.deb Checksums-Sha256: 0ad678cd271f0ddba98522994d45111b8272805150f56438af080b7eacccfda7 499405744 mrtrix3-dbgsym_3.0.8-1_amd64.deb 95bcdaa48fafc540f702d0a730b8ce88e8f8d3110a5582b3de339603dd44aa17 15339 mrtrix3_3.0.8-1_amd64.buildinfo 53bc2be7ef0939bf464d68c524a0734dfe19288e742bcfcee387240a0da9772a 10237768 mrtrix3_3.0.8-1_amd64.deb Files: 31d9c5ab996248d2afb96e176ab1ca74 499405744 debug optional mrtrix3-dbgsym_3.0.8-1_amd64.deb 0fcbc0168eec2542d8d1bfa6bc57f158 15339 science optional mrtrix3_3.0.8-1_amd64.buildinfo 6529da4d65f62aff3a60d5cde7db9dcc 10237768 science optional mrtrix3_3.0.8-1_amd64.deb +------------------------------------------------------------------------------+ | Buildinfo Wed, 17 Dec 2025 22:10:54 +0000 | +------------------------------------------------------------------------------+ Format: 1.0 Source: mrtrix3 Binary: mrtrix3 mrtrix3-dbgsym Architecture: amd64 Version: 3.0.8-1 Checksums-Md5: 31d9c5ab996248d2afb96e176ab1ca74 499405744 mrtrix3-dbgsym_3.0.8-1_amd64.deb 6529da4d65f62aff3a60d5cde7db9dcc 10237768 mrtrix3_3.0.8-1_amd64.deb Checksums-Sha1: 3f1338dd7a29e5d8ba5b3a48f20b925e8651c5f5 499405744 mrtrix3-dbgsym_3.0.8-1_amd64.deb e1ebf9d7eac2a7ad24609667fc6438acd63abce2 10237768 mrtrix3_3.0.8-1_amd64.deb Checksums-Sha256: 0ad678cd271f0ddba98522994d45111b8272805150f56438af080b7eacccfda7 499405744 mrtrix3-dbgsym_3.0.8-1_amd64.deb 53bc2be7ef0939bf464d68c524a0734dfe19288e742bcfcee387240a0da9772a 10237768 mrtrix3_3.0.8-1_amd64.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Wed, 17 Dec 2025 22:10:46 +0000 Build-Path: /build/reproducible-path/mrtrix3-3.0.8 Installed-Build-Depends: autoconf (= 2.72-3.1), automake (= 1:1.18.1-3), autopoint (= 0.23.2-1), autotools-dev (= 20240727.1), base-files (= 14), base-passwd (= 3.6.8), bash (= 5.3-1), bc (= 1.07.1-4), binutils (= 2.45.50.20251209-1), binutils-common (= 2.45.50.20251209-1), binutils-x86-64-linux-gnu (= 2.45.50.20251209-1), bsdextrautils (= 2.41.3-1), build-essential (= 12.12), bzip2 (= 1.0.8-6), comerr-dev (= 2.1-1.47.2-3+b4), coreutils (= 9.7-3), cpp (= 4:15.2.0-4), cpp-15 (= 15.2.0-11), cpp-15-x86-64-linux-gnu (= 15.2.0-11), cpp-x86-64-linux-gnu (= 4:15.2.0-4), dash (= 0.5.12-12), debconf (= 1.5.91), debhelper (= 13.29), debianutils (= 5.23.2), dh-autoreconf (= 21), dh-python (= 6.20251204.1), dh-strip-nondeterminism (= 1.15.0-1), diffutils (= 1:3.12-1), dpkg (= 1.22.21), dpkg-dev (= 1.22.21), dwz (= 0.16-2), file (= 1:5.46-5), findutils (= 4.10.0-3), fontconfig (= 2.15.0-2.4), fontconfig-config (= 2.15.0-2.4), fonts-dejavu-core (= 2.37-8), fonts-dejavu-mono (= 2.37-8), g++ (= 4:15.2.0-4), g++-15 (= 15.2.0-11), g++-15-x86-64-linux-gnu (= 15.2.0-11), g++-x86-64-linux-gnu (= 4:15.2.0-4), gcc (= 4:15.2.0-4), gcc-15 (= 15.2.0-11), gcc-15-base (= 15.2.0-11), gcc-15-x86-64-linux-gnu (= 15.2.0-11), gcc-x86-64-linux-gnu (= 4:15.2.0-4), gettext (= 0.23.2-1), gettext-base (= 0.23.2-1), gfortran (= 4:15.2.0-4), gfortran-15 (= 15.2.0-11), gfortran-15-x86-64-linux-gnu (= 15.2.0-11), gfortran-x86-64-linux-gnu (= 4:15.2.0-4), grep (= 3.12-1), groff-base (= 1.23.0-10), gzip (= 1.13-1), hdf5-helpers (= 1.14.5+repack-4), hicolor-icon-theme (= 0.18-2), hostname (= 3.25), imagemagick (= 8:7.1.2.8+dfsg1-1), imagemagick-7-common (= 8:7.1.2.8+dfsg1-1), imagemagick-7.q16 (= 8:7.1.2.8+dfsg1-1), init-system-helpers (= 1.69), intltool-debian (= 0.35.0+20060710.6), krb5-multidev (= 1.22.1-2), libacl1 (= 2.3.2-2+b1), libaec-dev (= 1.1.4-2), libaec0 (= 1.1.4-2), libamd3 (= 1:7.12.1+dfsg-1), libarchive-zip-perl (= 1.68-1), libarpack2t64 (= 3.9.1-6), libasan8 (= 15.2.0-11), libasound2-data (= 1.2.15-2), libasound2t64 (= 1.2.15-2), libatomic1 (= 15.2.0-11), libattr1 (= 1:2.5.2-3), libaudit-common (= 1:4.1.2-1), libaudit1 (= 1:4.1.2-1+b1), libavahi-client3 (= 0.8-17), libavahi-common-data (= 0.8-17), libavahi-common3 (= 0.8-17), libb2-1 (= 0.98.1-1.1+b2), libbinutils (= 2.45.50.20251209-1), libblas-dev (= 3.12.1-7), libblas3 (= 3.12.1-7), libblkid1 (= 2.41.3-1), libbrotli-dev (= 1.1.0-2+b9), libbrotli1 (= 1.1.0-2+b9), libbsd0 (= 0.12.2-2), libbz2-1.0 (= 1.0.8-6), libc-bin (= 2.42-6), libc-dev-bin (= 2.42-6), libc-gconv-modules-extra (= 2.42-6), libc6 (= 2.42-6), libc6-dev (= 2.42-6), libcamd3 (= 1:7.12.1+dfsg-1), libcap-ng0 (= 0.8.5-4+b2), libcap2 (= 1:2.75-10+b2), libcc1-0 (= 15.2.0-11), libccolamd3 (= 1:7.12.1+dfsg-1), libcholmod5 (= 1:7.12.1+dfsg-1), libcolamd3 (= 1:7.12.1+dfsg-1), libcom-err2 (= 1.47.2-3+b4), libcrypt-dev (= 1:4.5.1-1), libcrypt1 (= 1:4.5.1-1), libctf-nobfd0 (= 2.45.50.20251209-1), libctf0 (= 2.45.50.20251209-1), libcups2t64 (= 2.4.16-1), libcurl3t64-gnutls (= 8.18.0~rc2-1), libcurl4-openssl-dev (= 8.18.0~rc2-1), libcurl4t64 (= 8.18.0~rc2-1), libcxsparse4 (= 1:7.12.1+dfsg-1), libdav1d7 (= 1.5.2-1), libdb5.3t64 (= 5.3.28+dfsg2-11), libdbus-1-3 (= 1.16.2-2), libde265-0 (= 1.0.16-1+b1), libdebconfclient0 (= 0.282+b2), libdebhelper-perl (= 13.29), libdeflate-dev (= 1.23-2), libdeflate0 (= 1.23-2), libdouble-conversion3 (= 3.4.0-1), libdpkg-perl (= 1.22.21), libdrm-amdgpu1 (= 2.4.129-1), libdrm-common (= 2.4.129-1), libdrm-intel1 (= 2.4.129-1), libdrm2 (= 2.4.129-1), libduktape207 (= 2.7.0-2+b2), libedit2 (= 3.1-20250104-1), libegl-dev (= 1.7.0-1+b2), libegl-mesa0 (= 25.2.8-2+b2), libegl1 (= 1.7.0-1+b2), libeigen3-dev (= 3.4.0-5), libelf1t64 (= 0.194-1), libevdev2 (= 1.13.6+dfsg-1), libevent-2.1-7t64 (= 2.1.12-stable-10+b1), libexpat1 (= 2.7.3-1), libffi8 (= 3.5.2-3), libfftw3-bin (= 3.3.10-2+b1), libfftw3-dev (= 3.3.10-2+b1), libfftw3-double3 (= 3.3.10-2+b1), libfftw3-long3 (= 3.3.10-2+b1), libfftw3-quad3 (= 3.3.10-2+b1), libfftw3-single3 (= 3.3.10-2+b1), libfile-stripnondeterminism-perl (= 1.15.0-1), libflac14 (= 1.5.0+ds-5), libfltk-gl1.3t64 (= 1.3.11-3), libfltk1.3t64 (= 1.3.11-3), libfontconfig1 (= 2.15.0-2.4), libfreetype6 (= 2.13.3+dfsg-1), libgbm1 (= 25.2.8-2+b2), libgcc-15-dev (= 15.2.0-11), libgcc-s1 (= 15.2.0-11), libgdbm-compat4t64 (= 1.26-1), libgdbm6t64 (= 1.26-1), libgfortran-15-dev (= 15.2.0-11), libgfortran5 (= 15.2.0-11), libgl-dev (= 1.7.0-1+b2), libgl1 (= 1.7.0-1+b2), libgl1-mesa-dri (= 25.2.8-2+b2), libgl2ps1.4 (= 1.4.2+dfsg1-4), libglib2.0-0t64 (= 2.86.3-1), libglpk40 (= 5.0-2), libglu1-mesa (= 9.0.2-1.1+b3), libglu1-mesa-dev (= 9.0.2-1.1+b3), libglvnd0 (= 1.7.0-1+b2), libglx-dev (= 1.7.0-1+b2), libglx-mesa0 (= 25.2.8-2+b2), libglx0 (= 1.7.0-1+b2), libgmp-dev (= 2:6.3.0+dfsg-5), libgmp10 (= 2:6.3.0+dfsg-5), libgmpxx4ldbl (= 2:6.3.0+dfsg-5), libgnutls-dane0t64 (= 3.8.11-3), libgnutls-openssl27t64 (= 3.8.11-3), libgnutls28-dev (= 3.8.11-3), libgnutls30t64 (= 3.8.11-3), libgomp1 (= 15.2.0-11), libgprofng0 (= 2.45.50.20251209-1), libgraphicsmagick++-q16-12t64 (= 1.4+really1.3.46-2), libgraphicsmagick-q16-3t64 (= 1.4+really1.3.46-2), libgraphite2-3 (= 1.3.14-11), libgsl-dev (= 2.8+dfsg-5.1), libgsl28 (= 2.8+dfsg-5.1), libgslcblas0 (= 2.8+dfsg-5.1), libgssapi-krb5-2 (= 1.22.1-2), libgssrpc4t64 (= 1.22.1-2), libgudev-1.0-0 (= 238-7), libharfbuzz0b (= 12.2.0-1), libhdf5-310 (= 1.14.5+repack-4), libhdf5-cpp-310 (= 1.14.5+repack-4), libhdf5-dev (= 1.14.5+repack-4), libhdf5-fortran-310 (= 1.14.5+repack-4), libhdf5-hl-310 (= 1.14.5+repack-4), libhdf5-hl-cpp-310 (= 1.14.5+repack-4), libhdf5-hl-fortran-310 (= 1.14.5+repack-4), libheif-plugin-dav1d (= 1.20.2-2+b4), libheif-plugin-libde265 (= 1.20.2-2+b4), libheif1 (= 1.20.2-2+b4), libhogweed6t64 (= 3.10.2-1), libhwasan0 (= 15.2.0-11), libhwy1t64 (= 1.3.0-2), libice6 (= 2:1.1.1-1), libicu76 (= 76.1-4), libidn2-0 (= 2.3.8-4), libidn2-dev (= 2.3.8-4), libinput-bin (= 1.30.0-1), libinput10 (= 1.30.0-1), libintl-perl (= 1.35-1), libisl23 (= 0.27-1), libitm1 (= 15.2.0-11), libjack-jackd2-0 (= 1.9.22~dfsg-5), libjansson4 (= 2.14-2+b3), libjbig-dev (= 2.1-6.1+b2), libjbig0 (= 2.1-6.1+b2), libjpeg-dev (= 1:2.1.5-4), libjpeg62-turbo (= 1:2.1.5-4), libjpeg62-turbo-dev (= 1:2.1.5-4), libjxl0.11 (= 0.11.1-6), libk5crypto3 (= 1.22.1-2), libkadm5clnt-mit12 (= 1.22.1-2), libkadm5srv-mit12 (= 1.22.1-2), libkdb5-10t64 (= 1.22.1-2), libkeyutils1 (= 1.6.3-6), libkrb5-3 (= 1.22.1-2), libkrb5-dev (= 1.22.1-2), libkrb5support0 (= 1.22.1-2), liblapack-dev (= 3.12.1-7), liblapack3 (= 3.12.1-7), liblcms2-2 (= 2.17-1), libldap-dev (= 2.6.10+dfsg-1), libldap2 (= 2.6.10+dfsg-1), liblerc-dev (= 4.0.0+ds-5), liblerc4 (= 4.0.0+ds-5), libllvm19 (= 1:19.1.7-19), liblqr-1-0 (= 0.4.2-2.1+b2), liblsan0 (= 15.2.0-11), libltdl7 (= 2.5.4-9), liblzma-dev (= 5.8.1-2), liblzma5 (= 5.8.1-2), libmagic-mgc (= 1:5.46-5), libmagic1t64 (= 1:5.46-5), libmagickcore-7.q16-10 (= 8:7.1.2.8+dfsg1-1), libmagickwand-7.q16-10 (= 8:7.1.2.8+dfsg1-1), libmd0 (= 1.1.0-2+b1), libmd4c0 (= 0.5.2-2+b1), libmount1 (= 2.41.3-1), libmp3lame0 (= 3.100-6+b3), libmpc3 (= 1.3.1-2), libmpfr6 (= 4.2.2-2), libmpg123-0t64 (= 1.33.3-1), libmtdev1t64 (= 1.1.7-1), libncurses-dev (= 6.5+20251123-1), libncurses6 (= 6.5+20251123-1), libncursesw6 (= 6.5+20251123-1), libnettle8t64 (= 3.10.2-1), libnghttp2-14 (= 1.64.0-1.1+b1), libnghttp2-dev (= 1.64.0-1.1+b1), libnghttp3-9 (= 1.12.0-1), libnghttp3-dev (= 1.12.0-1), libngtcp2-16 (= 1.16.0-1), libngtcp2-crypto-gnutls8 (= 1.16.0-1), libngtcp2-crypto-ossl-dev (= 1.16.0-1), libngtcp2-crypto-ossl0 (= 1.16.0-1), libngtcp2-dev (= 1.16.0-1), libogg0 (= 1.3.6-2), libopengl-dev (= 1.7.0-1+b2), libopengl0 (= 1.7.0-1+b2), libopenjp2-7 (= 2.5.3-2.1), libopus0 (= 1.5.2-2), libp11-kit-dev (= 0.25.10-1), libp11-kit0 (= 0.25.10-1), libpam-modules (= 1.7.0-5), libpam-modules-bin (= 1.7.0-5), libpam-runtime (= 1.7.0-5), libpam0g (= 1.7.0-5), libpciaccess0 (= 0.17-3+b3), libpcre2-16-0 (= 10.46-1), libpcre2-8-0 (= 10.46-1), libperl5.40 (= 5.40.1-7), libpipeline1 (= 1.5.8-2), libpkgconf3 (= 1.8.1-4), libpng16-16t64 (= 1.6.53-1), libportaudio2 (= 19.7.0-1), libproc2-0 (= 2:4.0.4-9), libproxy1v5 (= 0.5.12-1), libpsl-dev (= 0.21.2-1.1+b1), libpsl5t64 (= 0.21.2-1.1+b1), libpython3-stdlib (= 3.13.9-2), libpython3.13-minimal (= 3.13.11-1+b1), libpython3.13-stdlib (= 3.13.11-1+b1), libqhull-r8.0 (= 2020.2-7), libqrupdate1 (= 1.1.5-3), libqscintilla2-qt6-15 (= 2.14.1+dfsg-2), libqscintilla2-qt6-l10n (= 2.14.1+dfsg-2), libqt5concurrent5t64 (= 5.15.17+dfsg-5), libqt5core5t64 (= 5.15.17+dfsg-5), libqt5dbus5t64 (= 5.15.17+dfsg-5), libqt5gui5t64 (= 5.15.17+dfsg-5), libqt5network5t64 (= 5.15.17+dfsg-5), libqt5opengl5-dev (= 5.15.17+dfsg-5), libqt5opengl5t64 (= 5.15.17+dfsg-5), libqt5printsupport5t64 (= 5.15.17+dfsg-5), libqt5sql5t64 (= 5.15.17+dfsg-5), libqt5svg5 (= 5.15.17-2), libqt5svg5-dev (= 5.15.17-2), libqt5test5t64 (= 5.15.17+dfsg-5), libqt5widgets5t64 (= 5.15.17+dfsg-5), libqt5xml5t64 (= 5.15.17+dfsg-5), libqt6core5compat6 (= 6.9.2-3), libqt6core6t64 (= 6.9.2+dfsg-3), libqt6dbus6 (= 6.9.2+dfsg-3), libqt6gui6 (= 6.9.2+dfsg-3), libqt6help6 (= 6.9.2-3), libqt6network6 (= 6.9.2+dfsg-3), libqt6opengl6 (= 6.9.2+dfsg-3), libqt6openglwidgets6 (= 6.9.2+dfsg-3), libqt6printsupport6 (= 6.9.2+dfsg-3), libqt6sql6 (= 6.9.2+dfsg-3), libqt6widgets6 (= 6.9.2+dfsg-3), libqt6xml6 (= 6.9.2+dfsg-3), libquadmath0 (= 15.2.0-11), libraw23t64 (= 0.21.4-2), libreadline-dev (= 8.3-3), libreadline8t64 (= 8.3-3), librtmp-dev (= 2.4+20151223.gitfa8646d.1-3), librtmp1 (= 2.4+20151223.gitfa8646d.1-3), libsamplerate0 (= 0.2.2-4+b2), libsasl2-2 (= 2.1.28+dfsg1-10), libsasl2-modules-db (= 2.1.28+dfsg1-10), libseccomp2 (= 2.6.0-2+b1), libselinux1 (= 3.9-4+b1), libsensors-config (= 1:3.6.2-2), libsensors5 (= 1:3.6.2-2), libsframe2 (= 2.45.50.20251209-1), libsharpyuv-dev (= 1.5.0-0.1), libsharpyuv0 (= 1.5.0-0.1), libsm6 (= 2:1.2.6-1), libsmartcols1 (= 2.41.3-1), libsndfile1 (= 1.2.2-3), libspqr4 (= 1:7.12.1+dfsg-1), libsqlite3-0 (= 3.46.1-8), libssh2-1-dev (= 1.11.1-1), libssh2-1t64 (= 1.11.1-1), libssl-dev (= 3.5.4-1), libssl3t64 (= 3.5.4-1), libstdc++-15-dev (= 15.2.0-11), libstdc++6 (= 15.2.0-11), libsuitesparseconfig7 (= 1:7.12.1+dfsg-1), libsystemd0 (= 259~rc3-1), libsz2 (= 1.1.4-2), libtasn1-6 (= 4.20.0-2), libtasn1-6-dev (= 4.20.0-2), libtext-charwidth-perl (= 0.04-11+b4), libtext-unidecode-perl (= 1.30-3), libtext-wrapi18n-perl (= 0.06-10), libtiff-dev (= 4.7.1-1), libtiff6 (= 4.7.1-1), libtiffxx6 (= 4.7.1-1), libtinfo6 (= 6.5+20251123-1), libtool (= 2.5.4-9), libts0t64 (= 1.22-1.1+b1), libtsan2 (= 15.2.0-11), libubsan1 (= 15.2.0-11), libuchardet0 (= 0.0.8-2), libudev1 (= 259~rc3-1), libumfpack6 (= 1:7.12.1+dfsg-1), libunbound8 (= 1.24.2-1), libunistring5 (= 1.3-2), libuuid1 (= 2.41.3-1), libvorbis0a (= 1.3.7-3), libvorbisenc2 (= 1.3.7-3), libvulkan-dev (= 1.4.328.1-1), libvulkan1 (= 1.4.328.1-1), libwacom-common (= 2.16.1-1), libwacom9 (= 2.16.1-1), libwayland-client0 (= 1.24.0-2+b1), libwebp-dev (= 1.5.0-0.1), libwebp7 (= 1.5.0-0.1), libwebpdecoder3 (= 1.5.0-0.1), libwebpdemux2 (= 1.5.0-0.1), libwebpmux3 (= 1.5.0-0.1), libwmflite-0.2-7 (= 0.2.13-2), libx11-6 (= 2:1.8.12-1), libx11-data (= 2:1.8.12-1), libx11-dev (= 2:1.8.12-1), libx11-xcb1 (= 2:1.8.12-1), libxau-dev (= 1:1.0.11-1), libxau6 (= 1:1.0.11-1), libxcb-cursor0 (= 0.1.5-1), libxcb-dri3-0 (= 1.17.0-2+b1), libxcb-glx0 (= 1.17.0-2+b1), libxcb-icccm4 (= 0.4.2-1), libxcb-image0 (= 0.4.0-2+b2), libxcb-keysyms1 (= 0.4.1-1), libxcb-present0 (= 1.17.0-2+b1), libxcb-randr0 (= 1.17.0-2+b1), libxcb-render-util0 (= 0.3.10-1), libxcb-render0 (= 1.17.0-2+b1), libxcb-shape0 (= 1.17.0-2+b1), libxcb-shm0 (= 1.17.0-2+b1), libxcb-sync1 (= 1.17.0-2+b1), libxcb-util1 (= 0.4.1-1), libxcb-xfixes0 (= 1.17.0-2+b1), libxcb-xinerama0 (= 1.17.0-2+b1), libxcb-xinput0 (= 1.17.0-2+b1), libxcb-xkb1 (= 1.17.0-2+b1), libxcb1 (= 1.17.0-2+b1), libxcb1-dev (= 1.17.0-2+b1), libxcursor1 (= 1:1.2.3-1), libxdmcp-dev (= 1:1.1.5-1), libxdmcp6 (= 1:1.1.5-1), libxext-dev (= 2:1.3.4-1+b3), libxext6 (= 2:1.3.4-1+b3), libxfixes3 (= 1:6.0.0-2+b4), libxft2 (= 2.3.6-1+b4), libxinerama1 (= 2:1.1.4-3+b4), libxkbcommon-x11-0 (= 1.12.3-1), libxkbcommon0 (= 1.12.3-1), libxml-libxml-perl (= 2.0207+dfsg+really+2.0134-7), libxml-namespacesupport-perl (= 1.12-2), libxml-sax-base-perl (= 1.09-3), libxml-sax-perl (= 1.02+dfsg-4), libxml2-16 (= 2.15.1+dfsg-2+b1), libxrender1 (= 1:0.9.12-1), libxshmfence1 (= 1.3.3-1), libxxf86vm1 (= 1:1.1.4-2), libz3-4 (= 4.13.3-1), libzstd-dev (= 1.5.7+dfsg-2), libzstd1 (= 1.5.7+dfsg-2), linux-libc-dev (= 6.17.11-1), m4 (= 1.4.20-2), make (= 4.4.1-3), man-db (= 2.13.1-1), matlab-support-dev (= 0.3), mawk (= 1.3.4.20250131-1), media-types (= 14.0.0), mesa-libgallium (= 25.2.8-2+b2), ncurses-base (= 6.5+20251123-1), ncurses-bin (= 6.5+20251123-1), netbase (= 6.5), nettle-dev (= 3.10.2-1), octave (= 10.3.0-3), octave-common (= 10.3.0-3), octave-dev (= 10.3.0-3), openssl-provider-legacy (= 3.5.4-1), patch (= 2.8-2), perl (= 5.40.1-7), perl-base (= 5.40.1-7), perl-modules-5.40 (= 5.40.1-7), pkgconf (= 1.8.1-4), pkgconf-bin (= 1.8.1-4), po-debconf (= 1.0.22), procps (= 2:4.0.4-9), python3 (= 3.13.9-2), python3-minimal (= 3.13.9-2), python3.13 (= 3.13.11-1+b1), python3.13-minimal (= 3.13.11-1+b1), qt5-qmake (= 5.15.17+dfsg-5), qt5-qmake-bin (= 5.15.17+dfsg-5), qtbase5-dev (= 5.15.17+dfsg-5), qtbase5-dev-tools (= 5.15.17+dfsg-5), qtchooser (= 66-2), readline-common (= 8.3-3), rpcsvc-proto (= 1.4.3-1), sed (= 4.9-2), sensible-utils (= 0.0.26), shared-mime-info (= 2.4-5+b3), sysvinit-utils (= 3.15-6), tar (= 1.35+dfsg-3.1), tex-common (= 6.20), texinfo (= 7.2-5), texinfo-lib (= 7.2-5), tzdata (= 2025c-2), ucf (= 3.0052), util-linux (= 2.41.3-1), x11-common (= 1:7.7+26), x11proto-dev (= 2024.1-1), xkb-data (= 2.46-1), xorg-sgml-doctools (= 1:1.11-1.1), xtrans-dev (= 1.6.0-1), xz-utils (= 5.8.1-2), zlib1g (= 1:1.3.dfsg+really1.3.1-1+b2), zlib1g-dev (= 1:1.3.dfsg+really1.3.1-1+b2) Environment: DEB_BUILD_OPTIONS="parallel=6" LANG="C.UTF-8" LC_COLLATE="C.UTF-8" LC_CTYPE="C.UTF-8" SOURCE_DATE_EPOCH="1765979088" +------------------------------------------------------------------------------+ | Package contents Wed, 17 Dec 2025 22:10:54 +0000 | +------------------------------------------------------------------------------+ mrtrix3-dbgsym_3.0.8-1_amd64.deb -------------------------------- new Debian package, version 2.0. size 499405744 bytes: control archive=5532 bytes. 4965 bytes, 12 lines control 12062 bytes, 114 lines md5sums Package: mrtrix3-dbgsym Source: mrtrix3 Version: 3.0.8-1 Auto-Built-Package: debug-symbols Architecture: amd64 Maintainer: Debian Med Packaging Team Installed-Size: 521873 Depends: mrtrix3 (= 3.0.8-1) Section: debug Priority: optional Description: debug symbols for mrtrix3 Build-Ids: 0020205582205a90b740d21092a6c9cf6191333f 00e5e9c252b19af84a9f2c34fe4ce4fcdb111eae 019e488c1d143e44e73aad8f021c2ba86875e071 02f6c3bf4a197bc0d3c3a947698eaef02a49b7e4 05a12c25b4eda08ef2d400ac0b3fb98a7a9f734c 0958040424bf35ce6465ff697aac69227913502a 0de759d26773067302fdef288553ca66cd9ec805 0f44ed6a6049ba6d6f9bb2fa9405854eceb53f15 13874bd7381dbbcd32fc1633f35193fe1d5f50f4 13bf02a201d59c1e5288af82c957c6974e69fb1a 15a79f78e3216db2ede7735cbed9aed7988b6470 16c4e63eaf1112cc2298d10201b5a8a00a9ce55c 1abafaeaacee4fda5663210cf2b8f196776bd99e 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5.11.0~rc1), libqt5network5t64 (>= 5.0.2), libqt5widgets5t64 (>= 5.15.1), libstdc++6 (>= 14), libtiff6 (>= 4.0.3), zlib1g (>= 1:1.1.4), python3 Recommends: python3-numpy Suggests: mrtrix3-doc, octave, matlab-support Conflicts: mrtrix Section: science Priority: optional Homepage: https://www.mrtrix.org Description: diffusion-weighted MRI white matter tractography Set of tools to perform diffusion-weighted MRI white matter tractography of the brain in the presence of crossing fibres, using Constrained Spherical Deconvolution, and a probabilisitic streamlines algorithm. Magnetic resonance images in DICOM, ANALYZE, or uncompressed NIfTI format are supported. drwxr-xr-x root/root 0 2025-12-17 13:44 ./ drwxr-xr-x root/root 0 2025-12-17 13:44 ./usr/ drwxr-xr-x root/root 0 2025-12-17 13:44 ./usr/bin/ lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/5tt2gmwmi -> ../lib/mrtrix3/bin/5tt2gmwmi lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/5tt2vis -> ../lib/mrtrix3/bin/5tt2vis lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/5ttcheck -> ../lib/mrtrix3/bin/5ttcheck lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/5ttedit -> ../lib/mrtrix3/bin/5ttedit lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/5ttgen -> ../lib/mrtrix3/bin/5ttgen lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/afdconnectivity -> ../lib/mrtrix3/bin/afdconnectivity lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/amp2response -> ../lib/mrtrix3/bin/amp2response lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/amp2sh -> ../lib/mrtrix3/bin/amp2sh lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/blend -> ../lib/mrtrix3/bin/blend lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/connectome2tck -> ../lib/mrtrix3/bin/connectome2tck lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/connectomeedit -> ../lib/mrtrix3/bin/connectomeedit lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/connectomestats -> ../lib/mrtrix3/bin/connectomestats lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/convert_bruker -> ../lib/mrtrix3/bin/convert_bruker lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/dcmedit -> ../lib/mrtrix3/bin/dcmedit lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/dcminfo -> ../lib/mrtrix3/bin/dcminfo lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/dirflip -> ../lib/mrtrix3/bin/dirflip lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/dirgen -> ../lib/mrtrix3/bin/dirgen lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/dirmerge -> ../lib/mrtrix3/bin/dirmerge lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/dirorder -> ../lib/mrtrix3/bin/dirorder lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/dirstat -> ../lib/mrtrix3/bin/dirstat lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/dwi2adc -> ../lib/mrtrix3/bin/dwi2adc lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/dwi2fod -> ../lib/mrtrix3/bin/dwi2fod lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/dwi2mask -> ../lib/mrtrix3/bin/dwi2mask lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/dwi2response -> ../lib/mrtrix3/bin/dwi2response lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/dwi2tensor -> ../lib/mrtrix3/bin/dwi2tensor lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/dwibiascorrect -> ../lib/mrtrix3/bin/dwibiascorrect lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/dwicat -> ../lib/mrtrix3/bin/dwicat lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/dwidenoise -> ../lib/mrtrix3/bin/dwidenoise lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/dwiextract -> ../lib/mrtrix3/bin/dwiextract lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/dwifslpreproc -> ../lib/mrtrix3/bin/dwifslpreproc lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/dwigradcheck -> ../lib/mrtrix3/bin/dwigradcheck lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/dwinormalise -> ../lib/mrtrix3/bin/dwinormalise lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/dwishellmath -> ../lib/mrtrix3/bin/dwishellmath lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/fixel2peaks -> ../lib/mrtrix3/bin/fixel2peaks lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/fixel2sh -> ../lib/mrtrix3/bin/fixel2sh lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/fixel2tsf -> ../lib/mrtrix3/bin/fixel2tsf lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/fixel2voxel -> ../lib/mrtrix3/bin/fixel2voxel lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/fixelcfestats -> ../lib/mrtrix3/bin/fixelcfestats lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/fixelconnectivity -> ../lib/mrtrix3/bin/fixelconnectivity lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/fixelconvert -> ../lib/mrtrix3/bin/fixelconvert lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/fixelcorrespondence -> ../lib/mrtrix3/bin/fixelcorrespondence lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/fixelcrop -> ../lib/mrtrix3/bin/fixelcrop lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/fixelfilter -> ../lib/mrtrix3/bin/fixelfilter lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/fixelreorient -> ../lib/mrtrix3/bin/fixelreorient lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/fod2dec -> ../lib/mrtrix3/bin/fod2dec lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/fod2fixel -> ../lib/mrtrix3/bin/fod2fixel lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/for_each -> ../lib/mrtrix3/bin/for_each lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/gen_scheme -> ../lib/mrtrix3/bin/gen_scheme lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/label2colour -> ../lib/mrtrix3/bin/label2colour lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/label2mesh -> ../lib/mrtrix3/bin/label2mesh lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/labelconvert -> ../lib/mrtrix3/bin/labelconvert lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/labelsgmfix -> ../lib/mrtrix3/bin/labelsgmfix lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/labelstats -> ../lib/mrtrix3/bin/labelstats lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/maskdump -> ../lib/mrtrix3/bin/maskdump lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/maskfilter -> ../lib/mrtrix3/bin/maskfilter lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/mesh2voxel -> ../lib/mrtrix3/bin/mesh2voxel lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/meshconvert -> ../lib/mrtrix3/bin/meshconvert lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/meshfilter -> ../lib/mrtrix3/bin/meshfilter lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/mraverageheader -> ../lib/mrtrix3/bin/mraverageheader lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/mrcalc -> ../lib/mrtrix3/bin/mrcalc lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/mrcat -> ../lib/mrtrix3/bin/mrcat lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/mrcentroid -> ../lib/mrtrix3/bin/mrcentroid lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/mrcheckerboardmask -> ../lib/mrtrix3/bin/mrcheckerboardmask lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/mrclusterstats -> ../lib/mrtrix3/bin/mrclusterstats lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/mrcolour -> ../lib/mrtrix3/bin/mrcolour lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/mrconvert -> ../lib/mrtrix3/bin/mrconvert lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/mrdegibbs -> ../lib/mrtrix3/bin/mrdegibbs lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/mrdump -> ../lib/mrtrix3/bin/mrdump lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/mredit -> ../lib/mrtrix3/bin/mredit lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/mrfilter -> ../lib/mrtrix3/bin/mrfilter lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/mrgrid -> ../lib/mrtrix3/bin/mrgrid lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/mrhistmatch -> ../lib/mrtrix3/bin/mrhistmatch lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/mrhistogram -> ../lib/mrtrix3/bin/mrhistogram lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/mrinfo -> ../lib/mrtrix3/bin/mrinfo lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/mrmath -> ../lib/mrtrix3/bin/mrmath lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/mrmetric -> ../lib/mrtrix3/bin/mrmetric lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/mrregister -> ../lib/mrtrix3/bin/mrregister lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/mrstats -> ../lib/mrtrix3/bin/mrstats lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/mrthreshold -> ../lib/mrtrix3/bin/mrthreshold lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/mrtransform -> ../lib/mrtrix3/bin/mrtransform lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/mrtrix3.py -> ../lib/mrtrix3/bin/mrtrix3.py lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/mrtrix_cleanup -> ../lib/mrtrix3/bin/mrtrix_cleanup lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/mrview -> ../lib/mrtrix3/bin/mrview lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/mtnormalise -> ../lib/mrtrix3/bin/mtnormalise lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/notfound -> ../lib/mrtrix3/bin/notfound lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/peaks2amp -> ../lib/mrtrix3/bin/peaks2amp lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/peaks2fixel -> ../lib/mrtrix3/bin/peaks2fixel lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/population_template -> ../lib/mrtrix3/bin/population_template lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/responsemean -> ../lib/mrtrix3/bin/responsemean lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/sh2amp -> ../lib/mrtrix3/bin/sh2amp lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/sh2peaks -> ../lib/mrtrix3/bin/sh2peaks lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/sh2power -> ../lib/mrtrix3/bin/sh2power lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/sh2response -> ../lib/mrtrix3/bin/sh2response lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/shbasis -> ../lib/mrtrix3/bin/shbasis lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/shconv -> ../lib/mrtrix3/bin/shconv lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/shview -> ../lib/mrtrix3/bin/shview lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/tck2connectome -> ../lib/mrtrix3/bin/tck2connectome lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/tck2fixel -> ../lib/mrtrix3/bin/tck2fixel lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/tckconvert -> ../lib/mrtrix3/bin/tckconvert lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/tckdfc -> ../lib/mrtrix3/bin/tckdfc lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/tckedit -> ../lib/mrtrix3/bin/tckedit lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/tckgen -> ../lib/mrtrix3/bin/tckgen lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/tckglobal -> ../lib/mrtrix3/bin/tckglobal lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/tckinfo -> ../lib/mrtrix3/bin/tckinfo lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/tckmap -> ../lib/mrtrix3/bin/tckmap lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/tckresample -> ../lib/mrtrix3/bin/tckresample lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/tcksample -> ../lib/mrtrix3/bin/tcksample lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/tcksift -> ../lib/mrtrix3/bin/tcksift lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/tcksift2 -> ../lib/mrtrix3/bin/tcksift2 lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/tckstats -> ../lib/mrtrix3/bin/tckstats lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/tcktransform -> ../lib/mrtrix3/bin/tcktransform lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/tensor2metric -> ../lib/mrtrix3/bin/tensor2metric lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/transformcalc -> ../lib/mrtrix3/bin/transformcalc lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/transformcompose -> ../lib/mrtrix3/bin/transformcompose lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/transformconvert -> ../lib/mrtrix3/bin/transformconvert lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/tsfdivide -> ../lib/mrtrix3/bin/tsfdivide lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/tsfinfo -> ../lib/mrtrix3/bin/tsfinfo lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/tsfmult -> ../lib/mrtrix3/bin/tsfmult lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/tsfsmooth -> ../lib/mrtrix3/bin/tsfsmooth lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/tsfthreshold -> ../lib/mrtrix3/bin/tsfthreshold lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/tsfvalidate -> ../lib/mrtrix3/bin/tsfvalidate lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/vectorstats -> ../lib/mrtrix3/bin/vectorstats lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/voxel2fixel -> ../lib/mrtrix3/bin/voxel2fixel lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/voxel2mesh -> ../lib/mrtrix3/bin/voxel2mesh lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/warp2metric -> ../lib/mrtrix3/bin/warp2metric lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/warpconvert -> ../lib/mrtrix3/bin/warpconvert lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/warpcorrect -> ../lib/mrtrix3/bin/warpcorrect lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/warpinit -> ../lib/mrtrix3/bin/warpinit lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/bin/warpinvert -> ../lib/mrtrix3/bin/warpinvert drwxr-xr-x root/root 0 2025-12-17 13:44 ./usr/lib/ drwxr-xr-x root/root 0 2025-12-17 13:44 ./usr/lib/mrtrix3/ drwxr-xr-x root/root 0 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/ -rwxr-xr-x root/root 264768 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/5tt2gmwmi -rwxr-xr-x root/root 264768 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/5tt2vis -rwxr-xr-x root/root 256576 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/5ttcheck -rwxr-xr-x root/root 264768 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/5ttedit -rwxr-xr-x root/root 3734 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/5ttgen -rwxr-xr-x root/root 1137464 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/afdconnectivity -rwxr-xr-x root/root 334328 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/amp2response -rwxr-xr-x root/root 428544 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/amp2sh -rwxr-xr-x root/root 2400 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/blend -rwxr-xr-x root/root 608920 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/connectome2tck -rwxr-xr-x root/root 215608 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/connectomeedit -rwxr-xr-x root/root 354856 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/connectomestats -rwxr-xr-x root/root 4467 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/convert_bruker -rwxr-xr-x root/root 51688 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/dcmedit -rwxr-xr-x root/root 47592 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/dcminfo -rwxr-xr-x root/root 129528 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/dirflip -rwxr-xr-x root/root 170520 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/dirgen -rwxr-xr-x root/root 92648 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/dirmerge -rwxr-xr-x root/root 203240 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/dirorder -rwxr-xr-x root/root 137720 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/dirsplit -rwxr-xr-x root/root 219632 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/dirstat -rwxr-xr-x root/root 211456 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/dwi2adc -rwxr-xr-x root/root 596480 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/dwi2fod -rwxr-xr-x root/root 428536 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/dwi2mask -rwxr-xr-x root/root 6403 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/dwi2response -rwxr-xr-x root/root 252408 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/dwi2tensor -rwxr-xr-x root/root 3558 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/dwibiascorrect -rwxr-xr-x root/root 8236 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/dwicat -rwxr-xr-x root/root 1030648 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/dwidenoise -rwxr-xr-x root/root 150008 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/dwiextract -rwxr-xr-x root/root 87478 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/dwifslpreproc -rwxr-xr-x root/root 9021 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/dwigradcheck -rwxr-xr-x root/root 2130 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/dwinormalise -rwxr-xr-x root/root 4030 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/dwishellmath -rwxr-xr-x root/root 199176 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/fixel2peaks -rwxr-xr-x root/root 211464 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/fixel2sh -rwxr-xr-x root/root 813904 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/fixel2tsf -rwxr-xr-x root/root 617176 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/fixel2voxel -rwxr-xr-x root/root 1391496 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/fixelcfestats -rwxr-xr-x root/root 1018736 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/fixelconnectivity -rwxr-xr-x root/root 301576 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/fixelconvert -rwxr-xr-x root/root 285192 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/fixelcorrespondence -rwxr-xr-x root/root 248328 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/fixelcrop -rwxr-xr-x root/root 1293168 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/fixelfilter -rwxr-xr-x root/root 268808 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/fixelreorient -rwxr-xr-x root/root 420344 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/fod2dec -rwxr-xr-x root/root 555536 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/fod2fixel -rwxr-xr-x root/root 17566 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/for_each -rwxr-xr-x root/root 5131 2025-10-21 18:03 ./usr/lib/mrtrix3/bin/gen_scheme -rwxr-xr-x root/root 276984 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/label2colour -rwxr-xr-x root/root 522760 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/label2mesh -rwxr-xr-x root/root 276984 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/labelconvert -rwxr-xr-x root/root 9725 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/labelsgmfix -rwxr-xr-x root/root 207376 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/labelstats -rwxr-xr-x root/root 117240 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/maskdump -rwxr-xr-x root/root 289336 2025-12-17 13:44 ./usr/lib/mrtrix3/bin/maskfilter -rwxr-xr-x root/root 580096 2025-12-17 13:44 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lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/share/man/man1/tsfsmooth.1.gz -> mrtrix3.1.gz lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/share/man/man1/tsfthreshold.1.gz -> mrtrix3.1.gz lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/share/man/man1/tsfvalidate.1.gz -> mrtrix3.1.gz lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/share/man/man1/vectorstats.1.gz -> mrtrix3.1.gz lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/share/man/man1/voxel2fixel.1.gz -> mrtrix3.1.gz lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/share/man/man1/voxel2mesh.1.gz -> mrtrix3.1.gz lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/share/man/man1/warp2metric.1.gz -> mrtrix3.1.gz lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/share/man/man1/warpconvert.1.gz -> mrtrix3.1.gz lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/share/man/man1/warpcorrect.1.gz -> mrtrix3.1.gz lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/share/man/man1/warpinit.1.gz -> mrtrix3.1.gz lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/share/man/man1/warpinvert.1.gz -> mrtrix3.1.gz drwxr-xr-x root/root 0 2025-12-17 13:44 ./usr/share/matlab/ drwxr-xr-x root/root 0 2025-12-17 13:44 ./usr/share/matlab/site/ drwxr-xr-x root/root 0 2025-12-17 13:44 ./usr/share/matlab/site/m/ lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/share/matlab/site/m/mrtrix -> ../../../mrtrix3/matlab drwxr-xr-x root/root 0 2025-12-17 13:44 ./usr/share/mrtrix3/ drwxr-xr-x root/root 0 2025-10-21 18:03 ./usr/share/mrtrix3/matlab/ drwxr-xr-x root/root 0 2025-10-21 18:03 ./usr/share/mrtrix3/matlab/private/ -rw-r--r-- root/root 1002 2025-10-21 18:03 ./usr/share/mrtrix3/matlab/private/add_field.m -rw-r--r-- root/root 3499 2025-10-21 18:03 ./usr/share/mrtrix3/matlab/read_mrtrix.m -rw-r--r-- root/root 2689 2025-10-21 18:03 ./usr/share/mrtrix3/matlab/read_mrtrix_tracks.m -rw-r--r-- root/root 2579 2025-10-21 18:03 ./usr/share/mrtrix3/matlab/read_mrtrix_tsf.m -rw-r--r-- root/root 5065 2025-10-21 18:03 ./usr/share/mrtrix3/matlab/write_mrtrix.m -rw-r--r-- root/root 2090 2025-10-21 18:03 ./usr/share/mrtrix3/matlab/write_mrtrix_tracks.m -rw-r--r-- root/root 2070 2025-10-21 18:03 ./usr/share/mrtrix3/matlab/write_mrtrix_tsf.m drwxr-xr-x root/root 0 2025-12-17 13:44 ./usr/share/octave/ drwxr-xr-x root/root 0 2025-12-17 13:44 ./usr/share/octave/site/ drwxr-xr-x root/root 0 2025-12-17 13:44 ./usr/share/octave/site/m/ lrwxrwxrwx root/root 0 2025-12-17 13:44 ./usr/share/octave/site/m/mrtrix -> ../../../mrtrix3/matlab drwxr-xr-x root/root 0 2025-12-17 13:44 ./usr/share/pixmaps/ -rw-r--r-- root/root 9782 2025-12-17 13:44 ./usr/share/pixmaps/mrtrix.png +------------------------------------------------------------------------------+ | Post Build Wed, 17 Dec 2025 22:11:01 +0000 | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup Wed, 17 Dec 2025 22:11:01 +0000 | +------------------------------------------------------------------------------+ Purging /build/reproducible-path Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary Wed, 17 Dec 2025 22:11:05 +0000 | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Type: any Build-Space: 7987492 Build-Time: 2261 Distribution: unstable Host Architecture: amd64 Install-Time: 5 Job: /srv/rebuilderd/tmp/rebuilderdyDrFbZ/inputs/mrtrix3_3.0.8-1.dsc Machine Architecture: amd64 Package: mrtrix3 Package-Time: 2350 Source-Version: 3.0.8-1 Space: 7987492 Status: successful Version: 3.0.8-1 -------------------------------------------------------------------------------- Finished at 2025-12-17T22:10:52Z Build needed 00:39:10, 7987492k disk space build artifacts stored in /srv/rebuilderd/tmp/rebuilderdyDrFbZ/out checking mrtrix3-dbgsym_3.0.8-1_amd64.deb: size differs for mrtrix3-dbgsym_3.0.8-1_amd64.deb