=============================================================================== About this build: this rebuild has been done as part of reproduce.debian.net where we aim to reproduce Debian binary packages distributed via ftp.debian.org, by rebuilding using the exact same packages as the original build on the buildds, as described in the relevant .buildinfo file from buildinfos.debian.net. For more information please go to https://reproduce.debian.net or join #debian-reproducible on irc.debian.org =============================================================================== Preparing download of sources for /srv/rebuilderd/tmp/rebuilderdbqWxAe/inputs/consensuscore_1.1.1+dfsg-9_amd64.buildinfo Source: consensuscore Version: 1.1.1+dfsg-9 rebuilderd-worker node: osuosl43-amd64 +------------------------------------------------------------------------------+ | Downloading sources Mon, 26 Jan 2026 04:55:30 +0000 | +------------------------------------------------------------------------------+ Get:1 https://deb.debian.org/debian trixie InRelease [140 kB] Get:2 https://deb.debian.org/debian-security trixie-security InRelease [43.4 kB] Get:3 https://deb.debian.org/debian trixie-updates InRelease [47.3 kB] Get:4 https://deb.debian.org/debian trixie-proposed-updates InRelease [57.6 kB] Get:5 https://deb.debian.org/debian trixie-backports InRelease [54.0 kB] Get:6 https://deb.debian.org/debian forky InRelease [137 kB] Get:7 https://deb.debian.org/debian sid InRelease [187 kB] Get:8 https://deb.debian.org/debian experimental InRelease [91.1 kB] Get:9 https://deb.debian.org/debian trixie/main Sources [10.5 MB] Get:10 https://deb.debian.org/debian trixie/non-free-firmware Sources [6,552 B] Get:11 https://deb.debian.org/debian-security trixie-security/main Sources [119 kB] Get:12 https://deb.debian.org/debian-security trixie-security/non-free-firmware Sources [696 B] Get:13 https://deb.debian.org/debian trixie-updates/main Sources [2,788 B] Get:14 https://deb.debian.org/debian trixie-proposed-updates/main Sources [39.0 kB] Get:15 https://deb.debian.org/debian trixie-backports/main Sources [129 kB] Get:16 https://deb.debian.org/debian trixie-backports/non-free-firmware Sources [2,468 B] Get:17 https://deb.debian.org/debian forky/main Sources [10.6 MB] Get:18 https://deb.debian.org/debian forky/non-free-firmware Sources [7,700 B] Get:19 https://deb.debian.org/debian sid/main Sources [11.2 MB] Get:20 https://deb.debian.org/debian sid/non-free-firmware Sources [9,688 B] Get:21 https://deb.debian.org/debian experimental/main Sources [366 kB] Get:22 https://deb.debian.org/debian experimental/non-free-firmware Sources [3,180 B] Fetched 33.7 MB in 3s (10.1 MB/s) Reading package lists... 'https://deb.debian.org/debian/pool/main/c/consensuscore/consensuscore_1.1.1%2bdfsg-9.dsc' consensuscore_1.1.1+dfsg-9.dsc 2374 SHA256:a0bcbadeeffeec940fb157763b05a2dbba976457217dc53b04f67799f52206bf 'https://deb.debian.org/debian/pool/main/c/consensuscore/consensuscore_1.1.1%2bdfsg.orig.tar.xz' consensuscore_1.1.1+dfsg.orig.tar.xz 363936 SHA256:47865e3769e2d6647003f70ffce68f8a5b2f69a6ae04ff27d106b3ec84660d82 'https://deb.debian.org/debian/pool/main/c/consensuscore/consensuscore_1.1.1%2bdfsg-9.debian.tar.xz' consensuscore_1.1.1+dfsg-9.debian.tar.xz 10340 SHA256:4db0ae878e268792a962af9d1bc855fe16811c67404673045a7ef2dabe5f458e 47865e3769e2d6647003f70ffce68f8a5b2f69a6ae04ff27d106b3ec84660d82 consensuscore_1.1.1+dfsg.orig.tar.xz 4db0ae878e268792a962af9d1bc855fe16811c67404673045a7ef2dabe5f458e consensuscore_1.1.1+dfsg-9.debian.tar.xz a0bcbadeeffeec940fb157763b05a2dbba976457217dc53b04f67799f52206bf consensuscore_1.1.1+dfsg-9.dsc +------------------------------------------------------------------------------+ | Calling debrebuild Mon, 26 Jan 2026 04:55:34 +0000 | +------------------------------------------------------------------------------+ Rebuilding consensuscore=1.1.1+dfsg-9 in /srv/rebuilderd/tmp/rebuilderdbqWxAe/inputs now. + nice /usr/bin/debrebuild --buildresult=/srv/rebuilderd/tmp/rebuilderdbqWxAe/out --builder=sbuild+unshare --cache=/srv/rebuilderd/cache -- /srv/rebuilderd/tmp/rebuilderdbqWxAe/inputs/consensuscore_1.1.1+dfsg-9_amd64.buildinfo /srv/rebuilderd/tmp/rebuilderdbqWxAe/inputs/consensuscore_1.1.1+dfsg-9_amd64.buildinfo contains a GPG signature which has NOT been validated Using defined Build-Path: /build/reproducible-path/consensuscore-1.1.1+dfsg I: verifying dsc... successful! Get:1 http://deb.debian.org/debian unstable InRelease [187 kB] Get:2 http://snapshot.debian.org/archive/debian/20260111T203533Z sid InRelease [187 kB] Get:3 http://deb.debian.org/debian unstable/main amd64 Packages [10.2 MB] Get:4 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 Packages [10.2 MB] Fetched 20.8 MB in 2s (10.7 MB/s) Reading package lists... W: http://snapshot.debian.org/archive/debian/20260111T203533Z/dists/sid/InRelease: Loading /etc/apt/trusted.gpg from deprecated option Dir::Etc::Trusted Get:1 http://deb.debian.org/debian unstable/main amd64 libhwasan0 amd64 15.2.0-12 [1538 kB] Fetched 1538 kB in 0s (90.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr_gqwmgg/libhwasan0_15.2.0-12_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 libmagic-mgc amd64 1:5.46-5 [338 kB] Fetched 338 kB in 0s (27.4 MB/s) dpkg-name: info: moved 'libmagic-mgc_1%3a5.46-5_amd64.deb' to '/srv/rebuilderd/tmp/tmpqw9spuo3/libmagic-mgc_5.46-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3.13 amd64 3.13.11-1+b1 [770 kB] Fetched 770 kB in 0s (53.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpamhrm7nq/python3.13_3.13.11-1+b1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 architecture-properties amd64 0.2.6 [2336 B] Fetched 2336 B in 0s (107 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyj9m4ldv/architecture-properties_0.2.6_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 libctf-nobfd0 amd64 2.45.50.20251209-1 [160 kB] Fetched 160 kB in 0s (15.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2tui2ls7/libctf-nobfd0_2.45.50.20251209-1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 libc-dev-bin amd64 2.42-7 [61.0 kB] Fetched 61.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpixoc3bjr/libc-dev-bin_2.42-7_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 rpcsvc-proto amd64 1.4.3-1 [63.3 kB] Fetched 63.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3ooo6z0v/rpcsvc-proto_1.4.3-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.29 [943 kB] Fetched 943 kB in 0s (60.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpeglvorxo/debhelper_13.29_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 liblsan0 amd64 15.2.0-12 [1249 kB] Fetched 1249 kB in 0s (82.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnbyhe89q/liblsan0_15.2.0-12_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 readline-common all 8.3-3 [74.8 kB] Fetched 74.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpys01kzvi/readline-common_8.3-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libselinux1 amd64 3.9-4+b1 [86.1 kB] Fetched 86.1 kB in 0s (6478 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv890uixb/libselinux1_3.9-4+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 findutils amd64 4.10.0-3 [700 kB] Fetched 700 kB in 0s (57.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpal9x931w/findutils_4.10.0-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libboost-dev amd64 1.83.0.2+b2 [3836 B] Fetched 3836 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptfr069u6/libboost-dev_1.83.0.2+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 ncurses-base all 6.6+20251231-1 [277 kB] Fetched 277 kB in 0s (27.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5165d8s8/ncurses-base_6.6+20251231-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 bzip2 amd64 1.0.8-6 [40.5 kB] Fetched 40.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr31gfmx1/bzip2_1.0.8-6_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 cpp-x86-64-linux-gnu amd64 4:15.2.0-4 [5292 B] Fetched 5292 B in 0s (522 kB/s) dpkg-name: info: moved 'cpp-x86-64-linux-gnu_4%3a15.2.0-4_amd64.deb' to '/srv/rebuilderd/tmp/tmpsrqykum0/cpp-x86-64-linux-gnu_15.2.0-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-2 [42.1 kB] Fetched 42.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpa6p8li55/libpipeline1_1.5.8-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1+b2 [919 kB] Fetched 919 kB in 0s (65.9 MB/s) dpkg-name: info: moved 'zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1+b2_amd64.deb' to '/srv/rebuilderd/tmp/tmp9re8mwsh/zlib1g-dev_1.3.dfsg+really1.3.1-1+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Fetched 104 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzkoal691/libarchive-zip-perl_1.68-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpam-runtime all 1.7.0-5 [249 kB] Fetched 249 kB in 0s (21.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsrabar1h/libpam-runtime_1.7.0-5_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 perl-base amd64 5.40.1-7 [1679 kB] Fetched 1679 kB in 0s (70.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx3i02ubd/perl-base_5.40.1-7_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 python3-all-dev amd64 3.13.9-2 [1072 B] Fetched 1072 B in 0s (38.8 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp54rsq99f/python3-all-dev_3.13.9-2_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 python3-dev amd64 3.13.9-2 [26.0 kB] Fetched 26.0 kB in 0s (1132 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphoduquxa/python3-dev_3.13.9-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libasan8 amd64 15.2.0-12 [2779 kB] Fetched 2779 kB in 0s (122 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbiv_9mxg/libasan8_15.2.0-12_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 perl-modules-5.40 all 5.40.1-7 [3012 kB] Fetched 3012 kB in 0s (128 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsaxy05lu/perl-modules-5.40_5.40.1-7_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 dh-exec amd64 0.31 [26.1 kB] Fetched 26.1 kB in 0s (2097 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph6zq88rt/dh-exec_0.31_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 gcc-15 amd64 15.2.0-12 [530 kB] Fetched 530 kB in 0s (34.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp45eip24w/gcc-15_15.2.0-12_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 libexpat1-dev amd64 2.7.3-1 [165 kB] Fetched 165 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc9mdyqap/libexpat1-dev_2.7.3-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgomp1 amd64 15.2.0-12 [140 kB] Fetched 140 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz4qmr9sb/libgomp1_15.2.0-12_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 libc6 amd64 2.42-7 [1891 kB] Fetched 1891 kB in 0s (109 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxkmb4lf1/libc6_2.42-7_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 libmd0 amd64 1.1.0-2+b1 [36.3 kB] Fetched 36.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx7it5dd_/libmd0_1.1.0-2+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.194-1 [185 kB] Fetched 185 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7sapfq82/libelf1t64_0.194-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libseccomp2 amd64 2.6.0-2+b1 [52.2 kB] Fetched 52.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxakck6sl/libseccomp2_2.6.0-2+b1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 libsframe2 amd64 2.45.50.20251209-1 [80.3 kB] Fetched 80.3 kB in 0s (7835 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpetyyq70v/libsframe2_2.45.50.20251209-1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 libunistring5 amd64 1.3-2 [477 kB] Fetched 477 kB in 0s (42.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6o8h08au/libunistring5_1.3-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.20-2 [325 kB] Fetched 325 kB in 0s (31.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdil2lmr9/m4_1.4.20-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 netbase all 6.5 [12.4 kB] Fetched 12.4 kB in 0s (1058 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuw5bfrr5/netbase_6.5_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 libpam-modules amd64 1.7.0-5 [179 kB] Fetched 179 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkkiyy69j/libpam-modules_1.7.0-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3.13-dev amd64 3.13.11-1+b1 [504 kB] Fetched 504 kB in 0s (45.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpi0qzssd1/python3.13-dev_3.13.11-1+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgfortran5 amd64 15.2.0-12 [862 kB] Fetched 862 kB in 0s (65.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpf43hytp6/libgfortran5_15.2.0-12_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libboost1.83-dev amd64 1.83.0-5+b1 [10.6 MB] Fetched 10.6 MB in 0s (176 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr8w6qymf/libboost1.83-dev_1.83.0-5+b1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 python3-all amd64 3.13.9-2 [1052 B] Fetched 1052 B in 0s (54.2 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5b_gxvaa/python3-all_3.13.9-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 dash amd64 0.5.12-12 [98.5 kB] Fetched 98.5 kB in 0s (8804 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5bdzidgo/dash_0.5.12-12_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libitm1 amd64 15.2.0-12 [26.5 kB] Fetched 26.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwhmvjrui/libitm1_15.2.0-12_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Fetched 12.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqczgghsa/python3-jaraco.functools_4.1.0-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 libpam0g amd64 1.7.0-5 [69.9 kB] Fetched 69.9 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr7ji2x1m/libpam0g_1.7.0-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-more-itertools all 10.8.0-1 [71.7 kB] Fetched 71.7 kB in 0s (7064 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5u75p1vn/python3-more-itertools_10.8.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgcc-15-dev amd64 15.2.0-12 [2717 kB] Fetched 2717 kB in 0s (120 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpapi6nas1/libgcc-15-dev_15.2.0-12_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgcc-s1 amd64 15.2.0-12 [71.5 kB] Fetched 71.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpieu67783/libgcc-s1_15.2.0-12_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 libpcre2-8-0 amd64 10.46-1 [298 kB] Fetched 298 kB in 0s (21.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprqtjm_jy/libpcre2-8-0_10.46-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 cpp-15 amd64 15.2.0-12 [1276 B] Fetched 1276 B in 0s (111 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1kvb7wr0/cpp-15_15.2.0-12_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 libctf0 amd64 2.45.50.20251209-1 [92.2 kB] Fetched 92.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp25dtbc2i/libctf0_2.45.50.20251209-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.text all 4.0.0-1 [11.4 kB] Fetched 11.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8ld4swkf/python3-jaraco.text_4.0.0-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 libuchardet0 amd64 0.0.8-2 [68.5 kB] Fetched 68.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5hz8adaz/libuchardet0_0.0.8-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libtool all 2.5.4-9 [540 kB] Fetched 540 kB in 0s (34.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptse5swaz/libtool_2.5.4-9_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxml2-16 amd64 2.15.1+dfsg-2+b1 [641 kB] Fetched 641 kB in 0s (38.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprzyfunki/libxml2-16_2.15.1+dfsg-2+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libstdc++-15-dev amd64 15.2.0-12 [2445 kB] Fetched 2445 kB in 0s (124 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3nq9wpt6/libstdc++-15-dev_15.2.0-12_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 liblapack3 amd64 3.12.1-7 [2785 kB] Fetched 2785 kB in 0s (128 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphdaz_7e0/liblapack3_3.12.1-7_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 g++-15-x86-64-linux-gnu amd64 15.2.0-12 [13.2 MB] Fetched 13.2 MB in 0s (159 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfi7stni9/g++-15-x86-64-linux-gnu_15.2.0-12_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 linux-libc-dev all 6.18.3-1 [2548 kB] Fetched 2548 kB in 0s (120 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwzp1spp9/linux-libc-dev_6.18.3-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 libisl23 amd64 0.27-1 [659 kB] Fetched 659 kB in 0s (55.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpba_0orvt/libisl23_0.27-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.22 [216 kB] Fetched 216 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl5c3osml/po-debconf_1.0.22_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-setuptools all 78.1.1-0.1 [738 kB] Fetched 738 kB in 0s (59.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpex6bk4is/python3-setuptools_78.1.1-0.1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 diffutils amd64 1:3.12-1 [405 kB] Fetched 405 kB in 0s (33.7 MB/s) dpkg-name: info: moved 'diffutils_1%3a3.12-1_amd64.deb' to '/srv/rebuilderd/tmp/tmpk39uhi_k/diffutils_3.12-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 hostname amd64 3.25 [11.0 kB] Fetched 11.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5t2omh90/hostname_3.25_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 base-files amd64 14 [72.9 kB] Fetched 72.9 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6pzzfg65/base-files_14_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 bash amd64 5.3-1 [1556 kB] Fetched 1556 kB in 0s (90.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph3s_8l99/bash_5.3-1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 libbz2-1.0 amd64 1.0.8-6 [37.9 kB] Fetched 37.9 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkpurvogm/libbz2-1.0_1.0.8-6_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 tzdata all 2025c-3 [263 kB] Fetched 263 kB in 0s (23.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2ukne6a_/tzdata_2025c-3_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 libmpc3 amd64 1.3.1-2 [55.8 kB] Fetched 55.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpen1sc77n/libmpc3_1.3.1-2_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 libc6-dev amd64 2.42-7 [2091 kB] Fetched 2091 kB in 0s (107 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv10q6lmw/libc6-dev_2.42-7_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 gcc-15-base amd64 15.2.0-12 [54.1 kB] Fetched 54.1 kB in 0s (5386 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkmx_pmah/gcc-15-base_15.2.0-12_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libperl5.40 amd64 5.40.1-7 [4317 kB] Fetched 4317 kB in 0s (139 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9og4ag3x/libperl5.40_5.40.1-7_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 xz-utils amd64 5.8.2-1 [705 kB] Fetched 705 kB in 0s (57.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfaphjsr3/xz-utils_5.8.2-1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 libzstd1 amd64 1.5.7+dfsg-3 [308 kB] Fetched 308 kB in 0s (29.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo5u1ve3t/libzstd1_1.5.7+dfsg-3_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 libpython3-all-dev amd64 3.13.9-2 [1072 B] Fetched 1072 B in 0s (9380 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxhf21dny/libpython3-all-dev_3.13.9-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libsystemd0 amd64 259-1 [470 kB] Fetched 470 kB in 0s (45.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplsux9m91/libsystemd0_259-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-autocommand all 2.2.2-4 [13.7 kB] Fetched 13.7 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp35ohaqke/python3-autocommand_2.2.2-4_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.23.2-1 [772 kB] Fetched 772 kB in 0s (62.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpk5jnklqe/autopoint_0.23.2-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 dpkg-dev all 1.23.3 [1318 kB] Fetched 1318 kB in 0s (88.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkhxuguva/dpkg-dev_1.23.3_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpython3.13 amd64 3.13.11-1+b1 [2185 kB] Fetched 2185 kB in 0s (109 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpet1j_pnk/libpython3.13_3.13.11-1+b1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 g++ amd64 4:15.2.0-4 [1344 B] Fetched 1344 B in 0s (0 B/s) dpkg-name: info: moved 'g++_4%3a15.2.0-4_amd64.deb' to '/srv/rebuilderd/tmp/tmpj9f_a_of/g++_15.2.0-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libcrypt1 amd64 1:4.5.1-1 [98.0 kB] Fetched 98.0 kB in 0s (0 B/s) dpkg-name: info: moved 'libcrypt1_1%3a4.5.1-1_amd64.deb' to '/srv/rebuilderd/tmp/tmp1i_c2lej/libcrypt1_4.5.1-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpython3.14-dev amd64 3.14.2-1+b1 [5429 kB] Fetched 5429 kB in 0s (155 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9_5gcxln/libpython3.14-dev_3.14.2-1+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-pkg-resources all 78.1.1-0.1 [224 kB] Fetched 224 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjai6pzpf/python3-pkg-resources_78.1.1-0.1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3.14 amd64 3.14.2-1+b1 [829 kB] Fetched 829 kB in 0s (62.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3lybxg91/python3.14_3.14.2-1+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 tar amd64 1.35+dfsg-3.1 [815 kB] Fetched 815 kB in 0s (64.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoyebedk8/tar_1.35+dfsg-3.1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 libgdbm-compat4t64 amd64 1.26-1 [52.8 kB] Fetched 52.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptq4ln3hd/libgdbm-compat4t64_1.26-1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 libbinutils amd64 2.45.50.20251209-1 [538 kB] Fetched 538 kB in 0s (35.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvixqnyv6/libbinutils_2.45.50.20251209-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3.14-minimal amd64 3.14.2-1+b1 [2407 kB] Fetched 2407 kB in 0s (120 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpep8xuxvc/python3.14-minimal_3.14.2-1+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.41.3-3 [99.1 kB] Fetched 99.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyo2j4nt2/bsdextrautils_2.41.3-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libdebconfclient0 amd64 0.282+b2 [11.2 kB] Fetched 11.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3wad0euo/libdebconfclient0_0.282+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 patch amd64 2.8-2 [134 kB] Fetched 134 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpev569xgs/patch_2.8-2_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 gcc amd64 4:15.2.0-4 [5160 B] Fetched 5160 B in 0s (0 B/s) dpkg-name: info: moved 'gcc_4%3a15.2.0-4_amd64.deb' to '/srv/rebuilderd/tmp/tmpgiksoac6/gcc_15.2.0-4_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 libdpkg-perl all 1.23.3 [657 kB] Fetched 657 kB in 0s (51.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8krp_n0u/libdpkg-perl_1.23.3_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 libgmp10 amd64 2:6.3.0+dfsg-5 [574 kB] Fetched 574 kB in 0s (52.3 MB/s) dpkg-name: info: moved 'libgmp10_2%3a6.3.0+dfsg-5_amd64.deb' to '/srv/rebuilderd/tmp/tmpgxz3vt0h/libgmp10_6.3.0+dfsg-5_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 python3-minimal amd64 3.13.9-2 [27.5 kB] Fetched 27.5 kB in 0s (1749 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv7g2jc4a/python3-minimal_3.13.9-2_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 libattr1 amd64 1:2.5.2-3 [22.9 kB] Fetched 22.9 kB in 0s (0 B/s) dpkg-name: info: moved 'libattr1_1%3a2.5.2-3_amd64.deb' to '/srv/rebuilderd/tmp/tmp0xnuk9uz/libattr1_2.5.2-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libaudit1 amd64 1:4.1.2-1+b1 [60.2 kB] Fetched 60.2 kB in 0s (0 B/s) dpkg-name: info: moved 'libaudit1_1%3a4.1.2-1+b1_amd64.deb' to '/srv/rebuilderd/tmp/tmpnov2u94i/libaudit1_4.1.2-1+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.18.1-3 [878 kB] Fetched 878 kB in 0s (69.2 MB/s) dpkg-name: info: moved 'automake_1%3a1.18.1-3_all.deb' to '/srv/rebuilderd/tmp/tmp2gcwkbjo/automake_1.18.1-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-inflect all 7.5.0-1 [33.0 kB] Fetched 33.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2j6cliyx/python3-inflect_7.5.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libcap2 amd64 1:2.75-10+b5 [28.8 kB] Fetched 28.8 kB in 0s (0 B/s) dpkg-name: info: moved 'libcap2_1%3a2.75-10+b5_amd64.deb' to '/srv/rebuilderd/tmp/tmp5twfseoj/libcap2_2.75-10+b5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 init-system-helpers all 1.69 [39.3 kB] Fetched 39.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_8fs9b3y/init-system-helpers_1.69_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libquadmath0 amd64 15.2.0-12 [145 kB] Fetched 145 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2grj46tg/libquadmath0_15.2.0-12_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpython3.13-dev amd64 3.13.11-1+b1 [5296 kB] Fetched 5296 kB in 0s (153 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplg0oz01j/libpython3.13-dev_3.13.11-1+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libubsan1 amd64 15.2.0-12 [1108 kB] Fetched 1108 kB in 0s (76.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgmm5bpjf/libubsan1_15.2.0-12_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libsimde-dev all 0.8.2-3 [467 kB] Fetched 467 kB in 0s (6387 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2op85rj6/libsimde-dev_0.8.2-3_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 libmagic1t64 amd64 1:5.46-5 [109 kB] Fetched 109 kB in 0s (0 B/s) dpkg-name: info: moved 'libmagic1t64_1%3a5.46-5_amd64.deb' to '/srv/rebuilderd/tmp/tmpuw1q8o0r/libmagic1t64_5.46-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libaudit-common all 1:4.1.2-1 [14.3 kB] Fetched 14.3 kB in 0s (1213 kB/s) dpkg-name: info: moved 'libaudit-common_1%3a4.1.2-1_all.deb' to '/srv/rebuilderd/tmp/tmpjr0pjqu1/libaudit-common_4.1.2-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 coreutils amd64 9.7-3 [3024 kB] Fetched 3024 kB in 0s (101 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxql06oso/coreutils_9.7-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3.14-dev amd64 3.14.2-1+b1 [507 kB] Fetched 507 kB in 0s (35.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph2a0h92t/python3.14-dev_3.14.2-1+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpython3.14 amd64 3.14.2-1+b1 [2374 kB] Fetched 2374 kB in 0s (115 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_1svtkno/libpython3.14_3.14.2-1+b1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 libc-bin amd64 2.42-7 [675 kB] Fetched 675 kB in 0s (48.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp39yt40e9/libc-bin_2.42-7_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 debianutils amd64 5.23.2 [92.4 kB] Fetched 92.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpko5c0lgx/debianutils_5.23.2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpython3.14-stdlib amd64 3.14.2-1+b1 [2258 kB] Fetched 2258 kB in 0s (99.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp126r51kp/libpython3.14-stdlib_3.14.2-1+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 cpp-15-x86-64-linux-gnu amd64 15.2.0-12 [12.1 MB] Fetched 12.1 MB in 0s (164 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx1mb69u_/cpp-15-x86-64-linux-gnu_15.2.0-12_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 python3-jaraco.context all 6.0.1-1 [8276 B] Fetched 8276 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx2fju143/python3-jaraco.context_6.0.1-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 grep amd64 3.12-1 [443 kB] Fetched 443 kB in 0s (41.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3qw29o97/grep_3.12-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libstdc++6 amd64 15.2.0-12 [737 kB] Fetched 737 kB in 0s (60.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpis37j96t/libstdc++6_15.2.0-12_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.26 [27.0 kB] Fetched 27.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcm5dloys/sensible-utils_0.0.26_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 openssl-provider-legacy amd64 3.5.4-1 [308 kB] Fetched 308 kB in 0s (28.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzca133cb/openssl-provider-legacy_3.5.4-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libtsan2 amd64 15.2.0-12 [2490 kB] Fetched 2490 kB in 0s (120 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv11fmq3d/libtsan2_15.2.0-12_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 libacl1 amd64 2.3.2-2+b1 [32.9 kB] Fetched 32.9 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprpitnk7d/libacl1_2.3.2-2+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 g++-15 amd64 15.2.0-12 [25.0 kB] Fetched 25.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1n8ufxqw/g++-15_15.2.0-12_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 gcc-x86-64-linux-gnu amd64 4:15.2.0-4 [1436 B] Fetched 1436 B in 0s (0 B/s) dpkg-name: info: moved 'gcc-x86-64-linux-gnu_4%3a15.2.0-4_amd64.deb' to '/srv/rebuilderd/tmp/tmpg61c5pe8/gcc-x86-64-linux-gnu_15.2.0-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.1-1 [1469 kB] Fetched 1469 kB in 0s (83.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpub281rks/man-db_2.13.1-1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 libsqlite3-0 amd64 3.46.1-8 [968 kB] Fetched 968 kB in 0s (65.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_b3337wo/libsqlite3-0_3.46.1-8_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-numpy-dev amd64 1:2.3.5+ds-3 [138 kB] Fetched 138 kB in 0s (0 B/s) dpkg-name: info: moved 'python3-numpy-dev_1%3a2.3.5+ds-3_amd64.deb' to '/srv/rebuilderd/tmp/tmpyue0f3hw/python3-numpy-dev_2.3.5+ds-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libjansson4 amd64 2.14-2+b4 [40.1 kB] Fetched 40.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvtyha84p/libjansson4_2.14-2+b4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpython3.13-stdlib amd64 3.13.11-1+b1 [1968 kB] Fetched 1968 kB in 0s (111 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpklkg6hxx/libpython3.13-stdlib_3.13.11-1+b1_amd64.deb' Downloading dependency 1 of 197: libhwasan0:amd64=15.2.0-12 Downloading dependency 2 of 197: libmagic-mgc:amd64=1:5.46-5 Downloading dependency 3 of 197: python3.13:amd64=3.13.11-1+b1 Downloading dependency 4 of 197: architecture-properties:amd64=0.2.6 Downloading dependency 5 of 197: libctf-nobfd0:amd64=2.45.50.20251209-1 Downloading dependency 6 of 197: 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dependency 87 of 197: tar:amd64=1.35+dfsg-3.1 Downloading dependency 88 of 197: libgdbm-compat4t64:amd64=1.26-1 Downloading dependency 89 of 197: libbinutils:amd64=2.45.50.20251209-1 Downloading dependency 90 of 197: python3.14-minimal:amd64=3.14.2-1+b1 Downloading dependency 91 of 197: bsdextrautils:amd64=2.41.3-3 Downloading dependency 92 of 197: libdebconfclient0:amd64=0.282+b2 Downloading dependency 93 of 197: patch:amd64=2.8-2 Downloading dependency 94 of 197: gcc:amd64=4:15.2.0-4 Downloading dependency 95 of 197: libdpkg-perl:amd64=1.23.3 Downloading dependency 96 of 197: libgmp10:amd64=2:6.3.0+dfsg-5 Downloading dependency 97 of 197: python3-minimal:amd64=3.13.9-2 Downloading dependency 98 of 197: libattr1:amd64=1:2.5.2-3 Downloading dependency 99 of 197: libaudit1:amd64=1:4.1.2-1+b1 Downloading dependency 100 of 197: automake:amd64=1:1.18.1-3 Downloading dependency 101 of 197: python3-inflect:amd64=7.5.0-1 Downloading dependency 102 of 197: libcap2:amd64=1:2.75-10+b5 Downloading dependency 103 of 197: init-system-helpers:amd64=1.69 Downloading dependency 104 of 197: libquadmath0:amd64=15.2.0-12 Downloading dependency 105 of 197: libpython3.13-dev:amd64=3.13.11-1+b1 Downloading dependency 106 of 197: libubsan1:amd64=15.2.0-12 Downloading dependency 107 of 197: libsimde-dev:amd64=0.8.2-3 Downloading dependency 108 of 197: libmagic1t64:amd64=1:5.46-5 Downloading dependency 109 of 197: libaudit-common:amd64=1:4.1.2-1 Downloading dependency 110 of 197: coreutils:amd64=9.7-3 Downloading dependency 111 of 197: python3.14-dev:amd64=3.14.2-1+b1 Downloading dependency 112 of 197: libpython3.14:amd64=3.14.2-1+b1 Downloading dependency 113 of 197: libc-bin:amd64=2.42-7 Downloading dependency 114 of 197: debianutils:amd64=5.23.2 Downloading dependency 115 of 197: libpython3.14-stdlib:amd64=3.14.2-1+b1 Downloading dependency 116 of 197: cpp-15-x86-64-linux-gnu:amd64=15.2.0-12 Downloading dependency 117 of 197: python3-jaraco.context:amd64=6.0.1-1 Downloading dependency 118 of 197: grep:amd64=3.12-1 Downloading dependency 119 of 197: libstdc++6:amd64=15.2.0-12 Downloading dependency 120 of 197: sensible-utils:amd64=0.0.26 Downloading dependency 121 of 197: openssl-provider-legacy:amd64=3.5.4-1 Downloading dependency 122 of 197: libtsan2:amd64=15.2.0-12 Downloading dependency 123 of 197: libacl1:amd64=2.3.2-2+b1 Downloading dependency 124 of 197: g++-15:amd64=15.2.0-12 Downloading dependency 125 of 197: gcc-x86-64-linux-gnu:amd64=4:15.2.0-4 Downloading dependency 126 of 197: man-db:amd64=2.13.1-1 Downloading dependency 127 of 197: libsqlite3-0:amd64=3.46.1-8 Downloading dependency 128 of 197: python3-numpy-dev:amd64=1:2.3.5+ds-3 Downloading dependency 129 of 197: libjansson4:amd64=2.14-2+b4 Downloading dependency 130 of 197: libpython3.13-stdlib:amd64=3.13.11-1+b1 Downloading dependency 131 of 197: libpython3.14-minimal:amd64=3.14.2-1+b1Get:1 http://deb.debian.org/debian unstable/main amd64 libpython3.14-minimal amd64 3.14.2-1+b1 [896 kB] Fetched 896 kB in 0s (59.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp97q2h6l1/libpython3.14-minimal_3.14.2-1+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-numpy amd64 1:2.3.5+ds-3 [7487 kB] Fetched 7487 kB in 0s (169 MB/s) dpkg-name: info: moved 'python3-numpy_1%3a2.3.5+ds-3_amd64.deb' to '/srv/rebuilderd/tmp/tmpdkwc7akp/python3-numpy_2.3.5+ds-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 perl amd64 5.40.1-7 [267 kB] Fetched 267 kB in 0s (24.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6keyivg2/perl_5.40.1-7_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.16-2 [108 kB] Fetched 108 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqytxolxn/dwz_0.16-2_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 libpython3-dev amd64 3.13.9-2 [10.7 kB] Fetched 10.7 kB in 0s (582 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9tmwy2ys/libpython3-dev_3.13.9-2_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 binutils-common amd64 2.45.50.20251209-1 [2541 kB] Fetched 2541 kB in 0s (118 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0403boqb/binutils-common_2.45.50.20251209-1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 python3 amd64 3.13.9-2 [27.5 kB] Fetched 27.5 kB in 0s (1391 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8mzydax9/python3_3.13.9-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 mawk amd64 1.3.4.20250131-2 [142 kB] Fetched 142 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz_p1xcyd/mawk_1.3.4.20250131-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.15.0-1 [8812 B] Fetched 8812 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0xv45c_o/dh-strip-nondeterminism_1.15.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-10 [1194 kB] Fetched 1194 kB in 0s (83.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmvq8xbs8/groff-base_1.23.0-10_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 libgdbm6t64 amd64 1.26-1 [78.5 kB] Fetched 78.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqgsmsivh/libgdbm6t64_1.26-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libtinfo6 amd64 6.6+20251231-1 [354 kB] Fetched 354 kB in 0s (24.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_rqxjscs/libtinfo6_6.6+20251231-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libcc1-0 amd64 15.2.0-12 [42.6 kB] Fetched 42.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9vmfhhzf/libcc1-0_15.2.0-12_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 libpam-modules-bin amd64 1.7.0-5 [49.1 kB] Fetched 49.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzzta4zjl/libpam-modules-bin_1.7.0-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libatomic1 amd64 15.2.0-12 [9524 B] Fetched 9524 B in 0s (845 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp43p9iz9p/libatomic1_15.2.0-12_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Fetched 22.9 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5_cubtf1/intltool-debian_0.35.0+20060710.6_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 libgprofng0 amd64 2.45.50.20251209-1 [823 kB] Fetched 823 kB in 0s (64.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcxa8bvxm/libgprofng0_2.45.50.20251209-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libsmartcols1 amd64 2.41.3-3 [145 kB] Fetched 145 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsgbmm1zj/libsmartcols1_2.41.3-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.23.2-1 [245 kB] Fetched 245 kB in 0s (24.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqp81hjz2/gettext-base_0.23.2-1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 libmpfr6 amd64 4.2.2-2 [742 kB] Fetched 742 kB in 0s (61.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp69fpf_jn/libmpfr6_4.2.2-2_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 file amd64 1:5.46-5 [43.6 kB] Fetched 43.6 kB in 0s (0 B/s) dpkg-name: info: moved 'file_1%3a5.46-5_amd64.deb' to '/srv/rebuilderd/tmp/tmp1j8lvokz/file_5.46-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-zipp all 3.23.0-1 [11.0 kB] Fetched 11.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphethxari/python3-zipp_3.23.0-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 dh-python all 7.20251231 [119 kB] Fetched 119 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl3wwm99b/dh-python_7.20251231_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 cpp amd64 4:15.2.0-4 [1564 B] Fetched 1564 B in 0s (0 B/s) dpkg-name: info: moved 'cpp_4%3a15.2.0-4_amd64.deb' to '/srv/rebuilderd/tmp/tmp89331j1s/cpp_15.2.0-4_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 binutils amd64 2.45.50.20251209-1 [281 kB] Fetched 281 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpps0oukbr/binutils_2.45.50.20251209-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 ncurses-bin amd64 6.6+20251231-1 [445 kB] Fetched 445 kB in 0s (41.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkf6derw8/ncurses-bin_6.6+20251231-1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 libc-gconv-modules-extra amd64 2.42-7 [1124 kB] Fetched 1124 kB in 0s (83.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7v9dwodc/libc-gconv-modules-extra_2.42-7_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 swig amd64 4.4.0-1 [1508 kB] Fetched 1508 kB in 0s (23.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2peufgc7/swig_4.4.0-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 base-passwd amd64 3.6.8 [54.6 kB] Fetched 54.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxznglwnk/base-passwd_3.6.8_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.23.2-1 [1687 kB] Fetched 1687 kB in 0s (92.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_6pf833l/gettext_0.23.2-1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 libreadline8t64 amd64 8.3-3 [191 kB] Fetched 191 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn_n00313/libreadline8t64_8.3-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 zlib1g amd64 1:1.3.dfsg+really1.3.1-1+b2 [89.0 kB] Fetched 89.0 kB in 0s (7844 kB/s) dpkg-name: info: moved 'zlib1g_1%3a1.3.dfsg+really1.3.1-1+b2_amd64.deb' to '/srv/rebuilderd/tmp/tmpn2uqit47/zlib1g_1.3.dfsg+really1.3.1-1+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libjs-sphinxdoc all 8.2.3-12 [27.9 kB] Fetched 27.9 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsomxpr9s/libjs-sphinxdoc_8.2.3-12_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 make amd64 4.4.1-3 [463 kB] Fetched 463 kB in 0s (42.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpf0nmeini/make_4.4.1-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 sed amd64 4.9-2 [329 kB] Fetched 329 kB in 0s (31.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7lthxgwn/sed_4.9-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libdb5.3t64 amd64 5.3.28+dfsg2-11 [710 kB] Fetched 710 kB in 0s (59.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpe_pfuxu6/libdb5.3t64_5.3.28+dfsg2-11_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 debconf all 1.5.91 [121 kB] Fetched 121 kB in 0s (9678 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyewzlgb1/debconf_1.5.91_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 libssl3t64 amd64 3.5.4-1 [2446 kB] Fetched 2446 kB in 0s (112 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm49cb7e6/libssl3t64_3.5.4-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 gcc-15-x86-64-linux-gnu amd64 15.2.0-12 [23.4 MB] Fetched 23.4 MB in 0s (164 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9hyzwthn/gcc-15-x86-64-linux-gnu_15.2.0-12_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 libblas3 amd64 3.12.1-7 [215 kB] Fetched 215 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph94ss3an/libblas3_3.12.1-7_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpython3.13-minimal amd64 3.13.11-1+b1 [866 kB] Fetched 866 kB in 0s (47.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzwufwc0c/libpython3.13-minimal_3.13.11-1+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-typeguard all 4.4.4-1 [37.1 kB] Fetched 37.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx_0r9ukj/python3-typeguard_4.4.4-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 build-essential amd64 12.12 [4624 B] Fetched 4624 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqummhufu/build-essential_12.12_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libblkid1 amd64 2.41.3-3 [174 kB] Fetched 174 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0hsc0j51/libblkid1_2.41.3-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libudev1 amd64 259-1 [157 kB] Fetched 157 kB in 0s (14.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3fi4ep9l/libudev1_259-1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 dpkg amd64 1.23.3 [1518 kB] Fetched 1518 kB in 0s (95.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpojnasiip/dpkg_1.23.3_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 libpython3-stdlib amd64 3.13.9-2 [10.5 kB] Fetched 10.5 kB in 0s (383 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpappvc1lg/libpython3-stdlib_3.13.9-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libmount1 amd64 2.41.3-3 [212 kB] Fetched 212 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc34qxsv2/libmount1_2.41.3-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libuuid1 amd64 2.41.3-3 [39.0 kB] Fetched 39.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkiywhtb1/libuuid1_2.41.3-3_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 liblzma5 amd64 5.8.2-1 [327 kB] Fetched 327 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm4uxlty7/liblzma5_5.8.2-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3-typing-extensions all 4.15.0-2 [92.5 kB] Fetched 92.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjuqv4km4/python3-typing-extensions_4.15.0-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 libexpat1 amd64 2.7.3-1 [112 kB] Fetched 112 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpim4z6imw/libexpat1_2.7.3-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 gzip amd64 1.13-1 [138 kB] Fetched 138 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprlub2pjz/gzip_1.13-1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 libffi8 amd64 3.5.2-3 [26.1 kB] Fetched 26.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5vcjv667/libffi8_3.5.2-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 util-linux amd64 2.41.3-3 [1167 kB] Fetched 1167 kB in 0s (89.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr9191k5l/util-linux_2.41.3-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.72-3.1 [494 kB] Fetched 494 kB in 0s (47.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyfqis0oz/autoconf_2.72-3.1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libcap-ng0 amd64 0.8.5-4+b2 [17.5 kB] Fetched 17.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxc77zhc7/libcap-ng0_0.8.5-4+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20240727.1 [60.2 kB] Fetched 60.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd3p5azf4/autotools-dev_20240727.1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 g++-x86-64-linux-gnu amd64 4:15.2.0-4 [1196 B] Fetched 1196 B in 0s (0 B/s) dpkg-name: info: moved 'g++-x86-64-linux-gnu_4%3a15.2.0-4_amd64.deb' to '/srv/rebuilderd/tmp/tmpblpxeta8/g++-x86-64-linux-gnu_15.2.0-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.15.0-1 [19.9 kB] Fetched 19.9 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4j66pnf1/libfile-stripnondeterminism-perl_1.15.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 python3.13-minimal amd64 3.13.11-1+b1 [2254 kB] Fetched 2254 kB in 0s (116 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdmuwxk47/python3.13-minimal_3.13.11-1+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.29 [92.6 kB] Fetched 92.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd_p0ij84/libdebhelper-perl_13.29_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 media-types all 14.0.0 [30.8 kB] Fetched 30.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpeoap3m8f/media-types_14.0.0_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 21 [12.2 kB] Fetched 12.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpedlc69vd/dh-autoreconf_21_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 sysvinit-utils amd64 3.15-6 [35.0 kB] Fetched 35.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvkl654ge/sysvinit-utils_3.15-6_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libncursesw6 amd64 6.6+20251231-1 [137 kB] Fetched 137 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr2s349yl/libncursesw6_6.6+20251231-1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T203533Z sid/main amd64 binutils-x86-64-linux-gnu amd64 2.45.50.20251209-1 [1060 kB] Fetched 1060 kB in 0s (78.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmhahl_2m/binutils-x86-64-linux-gnu_2.45.50.20251209-1_amd64.deb' dpkg-buildpackage: info: source package debootsnap-dummy dpkg-buildpackage: info: source version 1.0 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Equivs Dummy Package Generator dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/debootsnap-dummy/ dh_install dh_installdocs dh_installchangelogs dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'debootsnap-dummy' in '../debootsnap-dummy_1.0_all.deb'. dpkg-genbuildinfo --build=binary -O../debootsnap-dummy_1.0_amd64.buildinfo dpkg-genchanges --build=binary -O../debootsnap-dummy_1.0_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) The package has been created. Attention, the package has been created in the /srv/rebuilderd/tmp/tmp9dgv2zb9/cache directory, not in ".." as indicated by the message above! I: automatically chosen mode: unshare I: chroot architecture amd64 is equal to the host's architecture I: using /srv/rebuilderd/tmp/mmdebstrap.GMNSNpWYD7 as tempdir I: running --setup-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/setup00.sh /srv/rebuilderd/tmp/mmdebstrap.GMNSNpWYD7 127.0.0.1 - - [26/Jan/2026 04:57:09] code 404, message File not found 127.0.0.1 - - [26/Jan/2026 04:57:09] "GET /./InRelease HTTP/1.1" 404 - Ign:1 http://localhost:38099 ./ InRelease 127.0.0.1 - - [26/Jan/2026 04:57:09] "GET /./Release HTTP/1.1" 200 - Get:2 http://localhost:38099 ./ Release [462 B] 127.0.0.1 - - [26/Jan/2026 04:57:09] code 404, message File not found 127.0.0.1 - - [26/Jan/2026 04:57:09] "GET /./Release.gpg HTTP/1.1" 404 - Ign:3 http://localhost:38099 ./ Release.gpg 127.0.0.1 - - [26/Jan/2026 04:57:09] "GET /./Packages HTTP/1.1" 200 - Get:4 http://localhost:38099 ./ Packages [238 kB] Fetched 239 kB in 0s (13.0 MB/s) Reading package lists... usr-is-merged found but not real -- not running merged-usr setup hook I: skipping apt-get update because it was already run I: downloading packages with apt... 127.0.0.1 - - [26/Jan/2026 04:57:09] "GET /./gcc-15-base_15.2.0-12_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Jan/2026 04:57:09] "GET /./libc-gconv-modules-extra_2.42-7_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Jan/2026 04:57:09] "GET /./libc6_2.42-7_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Jan/2026 04:57:09] "GET /./libgcc-s1_15.2.0-12_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Jan/2026 04:57:09] "GET /./mawk_1.3.4.20250131-2_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Jan/2026 04:57:09] "GET /./base-files_14_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Jan/2026 04:57:09] "GET /./libtinfo6_6.6%2b20251231-1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Jan/2026 04:57:09] "GET /./debianutils_5.23.2_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Jan/2026 04:57:09] "GET /./bash_5.3-1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Jan/2026 04:57:09] "GET /./libacl1_2.3.2-2%2bb1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Jan/2026 04:57:09] "GET /./libattr1_2.5.2-3_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Jan/2026 04:57:09] "GET /./libcap2_2.75-10%2bb5_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Jan/2026 04:57:09] "GET /./libgmp10_6.3.0%2bdfsg-5_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Jan/2026 04:57:09] "GET /./libpcre2-8-0_10.46-1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Jan/2026 04:57:09] "GET /./libselinux1_3.9-4%2bb1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Jan/2026 04:57:09] "GET /./libzstd1_1.5.7%2bdfsg-3_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Jan/2026 04:57:09] "GET /./zlib1g_1.3.dfsg%2breally1.3.1-1%2bb2_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Jan/2026 04:57:09] "GET /./libssl3t64_3.5.4-1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Jan/2026 04:57:09] "GET /./openssl-provider-legacy_3.5.4-1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Jan/2026 04:57:09] "GET /./libsystemd0_259-1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Jan/2026 04:57:09] "GET /./coreutils_9.7-3_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Jan/2026 04:57:09] "GET /./dash_0.5.12-12_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Jan/2026 04:57:09] "GET /./diffutils_3.12-1_amd64.deb HTTP/1.1" 200 - 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I: extracting archives... I: running --extract-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/extract00.sh /srv/rebuilderd/tmp/mmdebstrap.GMNSNpWYD7 127.0.0.1 - - [26/Jan/2026 04:57:10] code 404, message File not found 127.0.0.1 - - [26/Jan/2026 04:57:10] "GET /./InRelease HTTP/1.1" 404 - Ign:1 http://localhost:38099 ./ InRelease 127.0.0.1 - - [26/Jan/2026 04:57:10] "GET /./Release HTTP/1.1" 304 - Hit:2 http://localhost:38099 ./ Release 127.0.0.1 - - [26/Jan/2026 04:57:10] code 404, message File not found 127.0.0.1 - - [26/Jan/2026 04:57:10] "GET /./Release.gpg HTTP/1.1" 404 - Ign:3 http://localhost:38099 ./ Release.gpg Reading package lists... usr-is-merged found but not real -- not running merged-usr extract hook I: installing essential packages... 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127.0.0.1 - - [26/Jan/2026 04:57:49] "GET /./python3.14_3.14.2-1%2bb1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Jan/2026 04:57:49] "GET /./python3-all_3.13.9-2_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Jan/2026 04:57:49] "GET /./python3.13-dev_3.13.11-1%2bb1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Jan/2026 04:57:49] "GET /./libjs-sphinxdoc_8.2.3-12_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Jan/2026 04:57:49] "GET /./python3-dev_3.13.9-2_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Jan/2026 04:57:49] "GET /./python3.14-dev_3.14.2-1%2bb1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Jan/2026 04:57:49] "GET /./python3-all-dev_3.13.9-2_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Jan/2026 04:57:49] "GET /./dh-exec_0.31_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Jan/2026 04:57:49] "GET /./python3-more-itertools_10.8.0-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Jan/2026 04:57:49] "GET /./python3-jaraco.functools_4.1.0-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Jan/2026 04:57:49] "GET /./python3-autocommand_2.2.2-4_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Jan/2026 04:57:49] "GET /./python3-typing-extensions_4.15.0-2_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Jan/2026 04:57:49] "GET /./python3-typeguard_4.4.4-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Jan/2026 04:57:49] "GET /./python3-inflect_7.5.0-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Jan/2026 04:57:49] "GET /./python3-pkg-resources_78.1.1-0.1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Jan/2026 04:57:49] "GET /./python3-zipp_3.23.0-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Jan/2026 04:57:49] "GET /./python3-setuptools_78.1.1-0.1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Jan/2026 04:57:49] "GET /./python3-jaraco.context_6.0.1-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Jan/2026 04:57:49] "GET /./python3-jaraco.text_4.0.0-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Jan/2026 04:57:49] "GET /./libsimde-dev_0.8.2-3_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Jan/2026 04:57:49] "GET /./dh-python_7.20251231_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Jan/2026 04:57:49] "GET /./swig_4.4.0-1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [26/Jan/2026 04:57:49] "GET /./debootsnap-dummy_1.0_all.deb HTTP/1.1" 200 - I: running --customize-hook directly: /srv/rebuilderd/tmp/tmp9dgv2zb9/apt_install.sh /srv/rebuilderd/tmp/mmdebstrap.GMNSNpWYD7 Reading package lists... Building dependency tree... Reading state information... libhwasan0 is already the newest version (15.2.0-12). libhwasan0 set to manually installed. libmagic-mgc is already the newest version (1:5.46-5). libmagic-mgc set to manually installed. python3.13 is already the newest version (3.13.11-1+b1). python3.13 set to manually installed. architecture-properties is already the newest version (0.2.6). architecture-properties set to manually installed. libctf-nobfd0 is already the newest version (2.45.50.20251209-1). libctf-nobfd0 set to manually installed. libc-dev-bin is already the newest version (2.42-7). libc-dev-bin set to manually installed. rpcsvc-proto is already the newest version (1.4.3-1). rpcsvc-proto set to manually installed. debhelper is already the newest version (13.29). debhelper set to manually installed. liblsan0 is already the newest version (15.2.0-12). liblsan0 set to manually installed. readline-common is already the newest version (8.3-3). readline-common set to manually installed. libselinux1 is already the newest version (3.9-4+b1). findutils is already the newest version (4.10.0-3). libboost-dev is already the newest version (1.83.0.2+b2). libboost-dev set to manually installed. ncurses-base is already the newest version (6.6+20251231-1). bzip2 is already the newest version (1.0.8-6). bzip2 set to manually installed. cpp-x86-64-linux-gnu is already the newest version (4:15.2.0-4). cpp-x86-64-linux-gnu set to manually installed. libpipeline1 is already the newest version (1.5.8-2). libpipeline1 set to manually installed. zlib1g-dev is already the newest version (1:1.3.dfsg+really1.3.1-1+b2). zlib1g-dev set to manually installed. libarchive-zip-perl is already the newest version (1.68-1). libarchive-zip-perl set to manually installed. libpam-runtime is already the newest version (1.7.0-5). perl-base is already the newest version (5.40.1-7). python3-all-dev is already the newest version (3.13.9-2). python3-all-dev set to manually installed. python3-dev is already the newest version (3.13.9-2). python3-dev set to manually installed. libasan8 is already the newest version (15.2.0-12). libasan8 set to manually installed. perl-modules-5.40 is already the newest version (5.40.1-7). perl-modules-5.40 set to manually installed. dh-exec is already the newest version (0.31). dh-exec set to manually installed. gcc-15 is already the newest version (15.2.0-12). gcc-15 set to manually installed. libexpat1-dev is already the newest version (2.7.3-1). libexpat1-dev set to manually installed. libgomp1 is already the newest version (15.2.0-12). libgomp1 set to manually installed. libc6 is already the newest version (2.42-7). libmd0 is already the newest version (1.1.0-2+b1). libelf1t64 is already the newest version (0.194-1). libelf1t64 set to manually installed. libseccomp2 is already the newest version (2.6.0-2+b1). libseccomp2 set to manually installed. libsframe2 is already the newest version (2.45.50.20251209-1). libsframe2 set to manually installed. libunistring5 is already the newest version (1.3-2). libunistring5 set to manually installed. m4 is already the newest version (1.4.20-2). m4 set to manually installed. netbase is already the newest version (6.5). netbase set to manually installed. libpam-modules is already the newest version (1.7.0-5). python3.13-dev is already the newest version (3.13.11-1+b1). python3.13-dev set to manually installed. libgfortran5 is already the newest version (15.2.0-12). libgfortran5 set to manually installed. libboost1.83-dev is already the newest version (1.83.0-5+b1). libboost1.83-dev set to manually installed. python3-all is already the newest version (3.13.9-2). python3-all set to manually installed. dash is already the newest version (0.5.12-12). libitm1 is already the newest version (15.2.0-12). libitm1 set to manually installed. python3-jaraco.functools is already the newest version (4.1.0-1). python3-jaraco.functools set to manually installed. libpam0g is already the newest version (1.7.0-5). python3-more-itertools is already the newest version (10.8.0-1). python3-more-itertools set to manually installed. libgcc-15-dev is already the newest version (15.2.0-12). libgcc-15-dev set to manually installed. libgcc-s1 is already the newest version (15.2.0-12). libpcre2-8-0 is already the newest version (10.46-1). cpp-15 is already the newest version (15.2.0-12). cpp-15 set to manually installed. libctf0 is already the newest version (2.45.50.20251209-1). libctf0 set to manually installed. python3-jaraco.text is already the newest version (4.0.0-1). python3-jaraco.text set to manually installed. libuchardet0 is already the newest version (0.0.8-2). libuchardet0 set to manually installed. libtool is already the newest version (2.5.4-9). libtool set to manually installed. libxml2-16 is already the newest version (2.15.1+dfsg-2+b1). libxml2-16 set to manually installed. libstdc++-15-dev is already the newest version (15.2.0-12). libstdc++-15-dev set to manually installed. liblapack3 is already the newest version (3.12.1-7). liblapack3 set to manually installed. g++-15-x86-64-linux-gnu is already the newest version (15.2.0-12). g++-15-x86-64-linux-gnu set to manually installed. linux-libc-dev is already the newest version (6.18.3-1). linux-libc-dev set to manually installed. libisl23 is already the newest version (0.27-1). libisl23 set to manually installed. po-debconf is already the newest version (1.0.22). po-debconf set to manually installed. python3-setuptools is already the newest version (78.1.1-0.1). python3-setuptools set to manually installed. diffutils is already the newest version (1:3.12-1). hostname is already the newest version (3.25). base-files is already the newest version (14). bash is already the newest version (5.3-1). libbz2-1.0 is already the newest version (1.0.8-6). tzdata is already the newest version (2025c-3). tzdata set to manually installed. libmpc3 is already the newest version (1.3.1-2). libmpc3 set to manually installed. libc6-dev is already the newest version (2.42-7). libc6-dev set to manually installed. gcc-15-base is already the newest version (15.2.0-12). libperl5.40 is already the newest version (5.40.1-7). libperl5.40 set to manually installed. xz-utils is already the newest version (5.8.2-1). xz-utils set to manually installed. libzstd1 is already the newest version (1.5.7+dfsg-3). libpython3-all-dev is already the newest version (3.13.9-2). libpython3-all-dev set to manually installed. libsystemd0 is already the newest version (259-1). python3-autocommand is already the newest version (2.2.2-4). python3-autocommand set to manually installed. autopoint is already the newest version (0.23.2-1). autopoint set to manually installed. dpkg-dev is already the newest version (1.23.3). dpkg-dev set to manually installed. libpython3.13 is already the newest version (3.13.11-1+b1). libpython3.13 set to manually installed. g++ is already the newest version (4:15.2.0-4). g++ set to manually installed. libcrypt1 is already the newest version (1:4.5.1-1). libpython3.14-dev is already the newest version (3.14.2-1+b1). libpython3.14-dev set to manually installed. python3-pkg-resources is already the newest version (78.1.1-0.1). python3-pkg-resources set to manually installed. python3.14 is already the newest version (3.14.2-1+b1). python3.14 set to manually installed. tar is already the newest version (1.35+dfsg-3.1). libgdbm-compat4t64 is already the newest version (1.26-1). libgdbm-compat4t64 set to manually installed. libbinutils is already the newest version (2.45.50.20251209-1). libbinutils set to manually installed. python3.14-minimal is already the newest version (3.14.2-1+b1). python3.14-minimal set to manually installed. bsdextrautils is already the newest version (2.41.3-3). bsdextrautils set to manually installed. libdebconfclient0 is already the newest version (0.282+b2). patch is already the newest version (2.8-2). patch set to manually installed. gcc is already the newest version (4:15.2.0-4). gcc set to manually installed. libdpkg-perl is already the newest version (1.23.3). libdpkg-perl set to manually installed. libgmp10 is already the newest version (2:6.3.0+dfsg-5). python3-minimal is already the newest version (3.13.9-2). python3-minimal set to manually installed. libattr1 is already the newest version (1:2.5.2-3). libaudit1 is already the newest version (1:4.1.2-1+b1). automake is already the newest version (1:1.18.1-3). automake set to manually installed. python3-inflect is already the newest version (7.5.0-1). python3-inflect set to manually installed. libcap2 is already the newest version (1:2.75-10+b5). init-system-helpers is already the newest version (1.69). libquadmath0 is already the newest version (15.2.0-12). libquadmath0 set to manually installed. libpython3.13-dev is already the newest version (3.13.11-1+b1). libpython3.13-dev set to manually installed. libubsan1 is already the newest version (15.2.0-12). libubsan1 set to manually installed. libsimde-dev is already the newest version (0.8.2-3). libsimde-dev set to manually installed. libmagic1t64 is already the newest version (1:5.46-5). libmagic1t64 set to manually installed. libaudit-common is already the newest version (1:4.1.2-1). coreutils is already the newest version (9.7-3). python3.14-dev is already the newest version (3.14.2-1+b1). python3.14-dev set to manually installed. libpython3.14 is already the newest version (3.14.2-1+b1). libpython3.14 set to manually installed. libc-bin is already the newest version (2.42-7). debianutils is already the newest version (5.23.2). libpython3.14-stdlib is already the newest version (3.14.2-1+b1). libpython3.14-stdlib set to manually installed. cpp-15-x86-64-linux-gnu is already the newest version (15.2.0-12). cpp-15-x86-64-linux-gnu set to manually installed. python3-jaraco.context is already the newest version (6.0.1-1). python3-jaraco.context set to manually installed. grep is already the newest version (3.12-1). libstdc++6 is already the newest version (15.2.0-12). libstdc++6 set to manually installed. sensible-utils is already the newest version (0.0.26). sensible-utils set to manually installed. openssl-provider-legacy is already the newest version (3.5.4-1). libtsan2 is already the newest version (15.2.0-12). libtsan2 set to manually installed. libacl1 is already the newest version (2.3.2-2+b1). g++-15 is already the newest version (15.2.0-12). g++-15 set to manually installed. gcc-x86-64-linux-gnu is already the newest version (4:15.2.0-4). gcc-x86-64-linux-gnu set to manually installed. man-db is already the newest version (2.13.1-1). man-db set to manually installed. libsqlite3-0 is already the newest version (3.46.1-8). libsqlite3-0 set to manually installed. python3-numpy-dev is already the newest version (1:2.3.5+ds-3). python3-numpy-dev set to manually installed. libjansson4 is already the newest version (2.14-2+b4). libjansson4 set to manually installed. libpython3.13-stdlib is already the newest version (3.13.11-1+b1). libpython3.13-stdlib set to manually installed. libpython3.14-minimal is already the newest version (3.14.2-1+b1). libpython3.14-minimal set to manually installed. python3-numpy is already the newest version (1:2.3.5+ds-3). python3-numpy set to manually installed. perl is already the newest version (5.40.1-7). perl set to manually installed. dwz is already the newest version (0.16-2). dwz set to manually installed. libpython3-dev is already the newest version (3.13.9-2). libpython3-dev set to manually installed. binutils-common is already the newest version (2.45.50.20251209-1). binutils-common set to manually installed. python3 is already the newest version (3.13.9-2). python3 set to manually installed. mawk is already the newest version (1.3.4.20250131-2). dh-strip-nondeterminism is already the newest version (1.15.0-1). dh-strip-nondeterminism set to manually installed. groff-base is already the newest version (1.23.0-10). groff-base set to manually installed. libgdbm6t64 is already the newest version (1.26-1). libgdbm6t64 set to manually installed. libtinfo6 is already the newest version (6.6+20251231-1). libcc1-0 is already the newest version (15.2.0-12). libcc1-0 set to manually installed. libpam-modules-bin is already the newest version (1.7.0-5). libatomic1 is already the newest version (15.2.0-12). libatomic1 set to manually installed. intltool-debian is already the newest version (0.35.0+20060710.6). intltool-debian set to manually installed. libgprofng0 is already the newest version (2.45.50.20251209-1). libgprofng0 set to manually installed. libsmartcols1 is already the newest version (2.41.3-3). gettext-base is already the newest version (0.23.2-1). gettext-base set to manually installed. libmpfr6 is already the newest version (4.2.2-2). libmpfr6 set to manually installed. file is already the newest version (1:5.46-5). file set to manually installed. python3-zipp is already the newest version (3.23.0-1). python3-zipp set to manually installed. dh-python is already the newest version (7.20251231). dh-python set to manually installed. cpp is already the newest version (4:15.2.0-4). cpp set to manually installed. binutils is already the newest version (2.45.50.20251209-1). binutils set to manually installed. ncurses-bin is already the newest version (6.6+20251231-1). libc-gconv-modules-extra is already the newest version (2.42-7). swig is already the newest version (4.4.0-1). swig set to manually installed. base-passwd is already the newest version (3.6.8). gettext is already the newest version (0.23.2-1). gettext set to manually installed. libreadline8t64 is already the newest version (8.3-3). libreadline8t64 set to manually installed. zlib1g is already the newest version (1:1.3.dfsg+really1.3.1-1+b2). libjs-sphinxdoc is already the newest version (8.2.3-12). libjs-sphinxdoc set to manually installed. make is already the newest version (4.4.1-3). make set to manually installed. sed is already the newest version (4.9-2). libdb5.3t64 is already the newest version (5.3.28+dfsg2-11). debconf is already the newest version (1.5.91). libssl3t64 is already the newest version (3.5.4-1). gcc-15-x86-64-linux-gnu is already the newest version (15.2.0-12). gcc-15-x86-64-linux-gnu set to manually installed. libblas3 is already the newest version (3.12.1-7). libblas3 set to manually installed. libpython3.13-minimal is already the newest version (3.13.11-1+b1). libpython3.13-minimal set to manually installed. python3-typeguard is already the newest version (4.4.4-1). python3-typeguard set to manually installed. build-essential is already the newest version (12.12). build-essential set to manually installed. libblkid1 is already the newest version (2.41.3-3). libudev1 is already the newest version (259-1). dpkg is already the newest version (1.23.3). libpython3-stdlib is already the newest version (3.13.9-2). libpython3-stdlib set to manually installed. libmount1 is already the newest version (2.41.3-3). libuuid1 is already the newest version (2.41.3-3). liblzma5 is already the newest version (5.8.2-1). python3-typing-extensions is already the newest version (4.15.0-2). python3-typing-extensions set to manually installed. libexpat1 is already the newest version (2.7.3-1). libexpat1 set to manually installed. gzip is already the newest version (1.13-1). libffi8 is already the newest version (3.5.2-3). libffi8 set to manually installed. util-linux is already the newest version (2.41.3-3). autoconf is already the newest version (2.72-3.1). autoconf set to manually installed. libcap-ng0 is already the newest version (0.8.5-4+b2). autotools-dev is already the newest version (20240727.1). autotools-dev set to manually installed. g++-x86-64-linux-gnu is already the newest version (4:15.2.0-4). g++-x86-64-linux-gnu set to manually installed. libfile-stripnondeterminism-perl is already the newest version (1.15.0-1). libfile-stripnondeterminism-perl set to manually installed. python3.13-minimal is already the newest version (3.13.11-1+b1). python3.13-minimal set to manually installed. libdebhelper-perl is already the newest version (13.29). libdebhelper-perl set to manually installed. media-types is already the newest version (14.0.0). media-types set to manually installed. dh-autoreconf is already the newest version (21). dh-autoreconf set to manually installed. sysvinit-utils is already the newest version (3.15-6). libncursesw6 is already the newest version (6.6+20251231-1). libncursesw6 set to manually installed. binutils-x86-64-linux-gnu is already the newest version (2.45.50.20251209-1). binutils-x86-64-linux-gnu set to manually installed. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: running --customize-hook in shell: sh -c 'chroot "$1" dpkg -r debootsnap-dummy' exec /srv/rebuilderd/tmp/mmdebstrap.GMNSNpWYD7 (Reading database ... 36526 files and directories currently installed.) Removing debootsnap-dummy (1.0) ... I: running --customize-hook in shell: sh -c 'chroot "$1" dpkg-query --showformat '${binary:Package}=${Version}\n' --show > "$1/pkglist"' exec /srv/rebuilderd/tmp/mmdebstrap.GMNSNpWYD7 I: running special hook: download /pkglist ./pkglist I: running --customize-hook in shell: sh -c 'rm "$1/pkglist"' exec /srv/rebuilderd/tmp/mmdebstrap.GMNSNpWYD7 I: running special hook: upload sources.list /etc/apt/sources.list I: waiting for background processes to finish... I: cleaning package lists and apt cache... I: skipping cleanup/reproducible as requested I: creating tarball... I: done I: removing tempdir /srv/rebuilderd/tmp/mmdebstrap.GMNSNpWYD7... I: success in 150.4006 seconds Downloading dependency 132 of 197: python3-numpy:amd64=1:2.3.5+ds-3 Downloading dependency 133 of 197: perl:amd64=5.40.1-7 Downloading dependency 134 of 197: dwz:amd64=0.16-2 Downloading dependency 135 of 197: libpython3-dev:amd64=3.13.9-2 Downloading dependency 136 of 197: binutils-common:amd64=2.45.50.20251209-1 Downloading dependency 137 of 197: python3:amd64=3.13.9-2 Downloading dependency 138 of 197: mawk:amd64=1.3.4.20250131-2 Downloading dependency 139 of 197: dh-strip-nondeterminism:amd64=1.15.0-1 Downloading dependency 140 of 197: groff-base:amd64=1.23.0-10 Downloading dependency 141 of 197: libgdbm6t64:amd64=1.26-1 Downloading dependency 142 of 197: libtinfo6:amd64=6.6+20251231-1 Downloading dependency 143 of 197: libcc1-0:amd64=15.2.0-12 Downloading dependency 144 of 197: libpam-modules-bin:amd64=1.7.0-5 Downloading dependency 145 of 197: libatomic1:amd64=15.2.0-12 Downloading dependency 146 of 197: intltool-debian:amd64=0.35.0+20060710.6 Downloading dependency 147 of 197: libgprofng0:amd64=2.45.50.20251209-1 Downloading dependency 148 of 197: libsmartcols1:amd64=2.41.3-3 Downloading dependency 149 of 197: gettext-base:amd64=0.23.2-1 Downloading dependency 150 of 197: libmpfr6:amd64=4.2.2-2 Downloading dependency 151 of 197: file:amd64=1:5.46-5 Downloading dependency 152 of 197: python3-zipp:amd64=3.23.0-1 Downloading dependency 153 of 197: dh-python:amd64=7.20251231 Downloading dependency 154 of 197: cpp:amd64=4:15.2.0-4 Downloading dependency 155 of 197: binutils:amd64=2.45.50.20251209-1 Downloading dependency 156 of 197: ncurses-bin:amd64=6.6+20251231-1 Downloading dependency 157 of 197: libc-gconv-modules-extra:amd64=2.42-7 Downloading dependency 158 of 197: swig:amd64=4.4.0-1 Downloading dependency 159 of 197: base-passwd:amd64=3.6.8 Downloading dependency 160 of 197: gettext:amd64=0.23.2-1 Downloading dependency 161 of 197: libreadline8t64:amd64=8.3-3 Downloading dependency 162 of 197: zlib1g:amd64=1:1.3.dfsg+really1.3.1-1+b2 Downloading dependency 163 of 197: libjs-sphinxdoc:amd64=8.2.3-12 Downloading dependency 164 of 197: make:amd64=4.4.1-3 Downloading dependency 165 of 197: sed:amd64=4.9-2 Downloading dependency 166 of 197: libdb5.3t64:amd64=5.3.28+dfsg2-11 Downloading dependency 167 of 197: debconf:amd64=1.5.91 Downloading dependency 168 of 197: libssl3t64:amd64=3.5.4-1 Downloading dependency 169 of 197: gcc-15-x86-64-linux-gnu:amd64=15.2.0-12 Downloading dependency 170 of 197: libblas3:amd64=3.12.1-7 Downloading dependency 171 of 197: libpython3.13-minimal:amd64=3.13.11-1+b1 Downloading dependency 172 of 197: python3-typeguard:amd64=4.4.4-1 Downloading dependency 173 of 197: build-essential:amd64=12.12 Downloading dependency 174 of 197: libblkid1:amd64=2.41.3-3 Downloading dependency 175 of 197: libudev1:amd64=259-1 Downloading dependency 176 of 197: dpkg:amd64=1.23.3 Downloading dependency 177 of 197: libpython3-stdlib:amd64=3.13.9-2 Downloading dependency 178 of 197: libmount1:amd64=2.41.3-3 Downloading dependency 179 of 197: libuuid1:amd64=2.41.3-3 Downloading dependency 180 of 197: liblzma5:amd64=5.8.2-1 Downloading dependency 181 of 197: python3-typing-extensions:amd64=4.15.0-2 Downloading dependency 182 of 197: libexpat1:amd64=2.7.3-1 Downloading dependency 183 of 197: gzip:amd64=1.13-1 Downloading dependency 184 of 197: libffi8:amd64=3.5.2-3 Downloading dependency 185 of 197: util-linux:amd64=2.41.3-3 Downloading dependency 186 of 197: autoconf:amd64=2.72-3.1 Downloading dependency 187 of 197: libcap-ng0:amd64=0.8.5-4+b2 Downloading dependency 188 of 197: autotools-dev:amd64=20240727.1 Downloading dependency 189 of 197: g++-x86-64-linux-gnu:amd64=4:15.2.0-4 Downloading dependency 190 of 197: libfile-stripnondeterminism-perl:amd64=1.15.0-1 Downloading dependency 191 of 197: python3.13-minimal:amd64=3.13.11-1+b1 Downloading dependency 192 of 197: libdebhelper-perl:amd64=13.29 Downloading dependency 193 of 197: media-types:amd64=14.0.0 Downloading dependency 194 of 197: dh-autoreconf:amd64=21 Downloading dependency 195 of 197: sysvinit-utils:amd64=3.15-6 Downloading dependency 196 of 197: libncursesw6:amd64=6.6+20251231-1 Downloading dependency 197 of 197: binutils-x86-64-linux-gnu:amd64=2.45.50.20251209-1 env --chdir=/srv/rebuilderd/tmp/rebuilderdbqWxAe/out DEB_BUILD_OPTIONS=parallel=6 LANG=C.UTF-8 LC_COLLATE=C.UTF-8 LC_CTYPE=C.UTF-8 SOURCE_DATE_EPOCH=1767942230 SBUILD_CONFIG=/srv/rebuilderd/tmp/debrebuild0LmBu1/debrebuild.sbuildrc.JZksBeliNDuN sbuild --build=amd64 --host=amd64 --no-source --arch-any --no-arch-all --chroot=/srv/rebuilderd/tmp/debrebuild0LmBu1/debrebuild.tar.Ge6buRS9pNDT --chroot-mode=unshare --dist=unstable --no-run-lintian --no-run-piuparts --no-run-autopkgtest --no-apt-update --no-apt-upgrade --no-apt-distupgrade --verbose --nolog --bd-uninstallable-explainer= --build-path=/build/reproducible-path --dsc-dir=consensuscore-1.1.1+dfsg /srv/rebuilderd/tmp/rebuilderdbqWxAe/inputs/consensuscore_1.1.1+dfsg-9.dsc I: consider moving your ~/.sbuildrc to /srv/rebuilderd/.config/sbuild/config.pl The Debian buildds switched to the "unshare" backend and sbuild will default to it in the future. To start using "unshare" add this to your `~/.config/sbuild/config.pl`: $chroot_mode = "unshare"; If you want to keep the old "schroot" mode even in the future, add the following to your `~/.config/sbuild/config.pl`: $chroot_mode = "schroot"; $schroot = "schroot"; sbuild (Debian sbuild) 0.89.3+deb13u4 (28 December 2025) on osuosl43-amd64.novalocal +==============================================================================+ | consensuscore 1.1.1+dfsg-9 (amd64) Mon, 26 Jan 2026 04:59:39 +0000 | +==============================================================================+ Package: consensuscore Version: 1.1.1+dfsg-9 Source Version: 1.1.1+dfsg-9 Distribution: unstable Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 Build Type: any I: No tarballs found in /srv/rebuilderd/.cache/sbuild I: Unpacking /srv/rebuilderd/tmp/debrebuild0LmBu1/debrebuild.tar.Ge6buRS9pNDT to /srv/rebuilderd/tmp/tmp.sbuild.NsPDaxXFm9... I: Setting up the chroot... I: Creating chroot session... I: Setting up log color... I: Setting up apt archive... +------------------------------------------------------------------------------+ | Fetch source files Mon, 26 Jan 2026 04:59:44 +0000 | +------------------------------------------------------------------------------+ Local sources ------------- /srv/rebuilderd/tmp/rebuilderdbqWxAe/inputs/consensuscore_1.1.1+dfsg-9.dsc exists in /srv/rebuilderd/tmp/rebuilderdbqWxAe/inputs; copying to chroot +------------------------------------------------------------------------------+ | Install package build dependencies Mon, 26 Jan 2026 04:59:45 +0000 | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), dh-exec, dh-sequence-python3, architecture-is-64-bit, architecture-is-little-endian, libboost-dev, libsimde-dev, python3-all-dev, python3-numpy, python3-numpy-dev, python3-setuptools, swig, build-essential Filtered Build-Depends: debhelper-compat (= 13), dh-exec, dh-sequence-python3, architecture-is-64-bit, architecture-is-little-endian, libboost-dev, libsimde-dev, python3-all-dev, python3-numpy, python3-numpy-dev, python3-setuptools, swig, build-essential dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/build/reproducible-path/resolver-gDUB9o/apt_archive/sbuild-build-depends-main-dummy.deb'. Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies +------------------------------------------------------------------------------+ | Check architectures Mon, 26 Jan 2026 04:59:48 +0000 | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in any) +------------------------------------------------------------------------------+ | Build environment Mon, 26 Jan 2026 04:59:49 +0000 | +------------------------------------------------------------------------------+ Kernel: Linux 6.12.63+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.63-1 (2025-12-30) amd64 (x86_64) Toolchain package versions: binutils_2.45.50.20251209-1 dpkg-dev_1.23.3 g++-15_15.2.0-12 gcc-15_15.2.0-12 libc6-dev_2.42-7 libstdc++-15-dev_15.2.0-12 libstdc++6_15.2.0-12 linux-libc-dev_6.18.3-1 Package versions: architecture-properties_0.2.6 autoconf_2.72-3.1 automake_1:1.18.1-3 autopoint_0.23.2-1 autotools-dev_20240727.1 base-files_14 base-passwd_3.6.8 bash_5.3-1 binutils_2.45.50.20251209-1 binutils-common_2.45.50.20251209-1 binutils-x86-64-linux-gnu_2.45.50.20251209-1 bsdextrautils_2.41.3-3 build-essential_12.12 bzip2_1.0.8-6 coreutils_9.7-3 cpp_4:15.2.0-4 cpp-15_15.2.0-12 cpp-15-x86-64-linux-gnu_15.2.0-12 cpp-x86-64-linux-gnu_4:15.2.0-4 dash_0.5.12-12 debconf_1.5.91 debhelper_13.29 debianutils_5.23.2 dh-autoreconf_21 dh-exec_0.31 dh-python_7.20251231 dh-strip-nondeterminism_1.15.0-1 diffutils_1:3.12-1 dpkg_1.23.3 dpkg-dev_1.23.3 dwz_0.16-2 file_1:5.46-5 findutils_4.10.0-3 g++_4:15.2.0-4 g++-15_15.2.0-12 g++-15-x86-64-linux-gnu_15.2.0-12 g++-x86-64-linux-gnu_4:15.2.0-4 gcc_4:15.2.0-4 gcc-15_15.2.0-12 gcc-15-base_15.2.0-12 gcc-15-x86-64-linux-gnu_15.2.0-12 gcc-x86-64-linux-gnu_4:15.2.0-4 gettext_0.23.2-1 gettext-base_0.23.2-1 grep_3.12-1 groff-base_1.23.0-10 gzip_1.13-1 hostname_3.25 init-system-helpers_1.69 intltool-debian_0.35.0+20060710.6 libacl1_2.3.2-2+b1 libarchive-zip-perl_1.68-1 libasan8_15.2.0-12 libatomic1_15.2.0-12 libattr1_1:2.5.2-3 libaudit-common_1:4.1.2-1 libaudit1_1:4.1.2-1+b1 libbinutils_2.45.50.20251209-1 libblas3_3.12.1-7 libblkid1_2.41.3-3 libboost-dev_1.83.0.2+b2 libboost1.83-dev_1.83.0-5+b1 libbz2-1.0_1.0.8-6 libc-bin_2.42-7 libc-dev-bin_2.42-7 libc-gconv-modules-extra_2.42-7 libc6_2.42-7 libc6-dev_2.42-7 libcap-ng0_0.8.5-4+b2 libcap2_1:2.75-10+b5 libcc1-0_15.2.0-12 libcrypt1_1:4.5.1-1 libctf-nobfd0_2.45.50.20251209-1 libctf0_2.45.50.20251209-1 libdb5.3t64_5.3.28+dfsg2-11 libdebconfclient0_0.282+b2 libdebhelper-perl_13.29 libdpkg-perl_1.23.3 libelf1t64_0.194-1 libexpat1_2.7.3-1 libexpat1-dev_2.7.3-1 libffi8_3.5.2-3 libfile-stripnondeterminism-perl_1.15.0-1 libgcc-15-dev_15.2.0-12 libgcc-s1_15.2.0-12 libgdbm-compat4t64_1.26-1 libgdbm6t64_1.26-1 libgfortran5_15.2.0-12 libgmp10_2:6.3.0+dfsg-5 libgomp1_15.2.0-12 libgprofng0_2.45.50.20251209-1 libhwasan0_15.2.0-12 libisl23_0.27-1 libitm1_15.2.0-12 libjansson4_2.14-2+b4 libjs-sphinxdoc_8.2.3-12 liblapack3_3.12.1-7 liblsan0_15.2.0-12 liblzma5_5.8.2-1 libmagic-mgc_1:5.46-5 libmagic1t64_1:5.46-5 libmd0_1.1.0-2+b1 libmount1_2.41.3-3 libmpc3_1.3.1-2 libmpfr6_4.2.2-2 libncursesw6_6.6+20251231-1 libpam-modules_1.7.0-5 libpam-modules-bin_1.7.0-5 libpam-runtime_1.7.0-5 libpam0g_1.7.0-5 libpcre2-8-0_10.46-1 libperl5.40_5.40.1-7 libpipeline1_1.5.8-2 libpython3-all-dev_3.13.9-2 libpython3-dev_3.13.9-2 libpython3-stdlib_3.13.9-2 libpython3.13_3.13.11-1+b1 libpython3.13-dev_3.13.11-1+b1 libpython3.13-minimal_3.13.11-1+b1 libpython3.13-stdlib_3.13.11-1+b1 libpython3.14_3.14.2-1+b1 libpython3.14-dev_3.14.2-1+b1 libpython3.14-minimal_3.14.2-1+b1 libpython3.14-stdlib_3.14.2-1+b1 libquadmath0_15.2.0-12 libreadline8t64_8.3-3 libseccomp2_2.6.0-2+b1 libselinux1_3.9-4+b1 libsframe2_2.45.50.20251209-1 libsimde-dev_0.8.2-3 libsmartcols1_2.41.3-3 libsqlite3-0_3.46.1-8 libssl3t64_3.5.4-1 libstdc++-15-dev_15.2.0-12 libstdc++6_15.2.0-12 libsystemd0_259-1 libtinfo6_6.6+20251231-1 libtool_2.5.4-9 libtsan2_15.2.0-12 libubsan1_15.2.0-12 libuchardet0_0.0.8-2 libudev1_259-1 libunistring5_1.3-2 libuuid1_2.41.3-3 libxml2-16_2.15.1+dfsg-2+b1 libzstd1_1.5.7+dfsg-3 linux-libc-dev_6.18.3-1 m4_1.4.20-2 make_4.4.1-3 man-db_2.13.1-1 mawk_1.3.4.20250131-2 media-types_14.0.0 ncurses-base_6.6+20251231-1 ncurses-bin_6.6+20251231-1 netbase_6.5 openssl-provider-legacy_3.5.4-1 patch_2.8-2 perl_5.40.1-7 perl-base_5.40.1-7 perl-modules-5.40_5.40.1-7 po-debconf_1.0.22 python3_3.13.9-2 python3-all_3.13.9-2 python3-all-dev_3.13.9-2 python3-autocommand_2.2.2-4 python3-dev_3.13.9-2 python3-inflect_7.5.0-1 python3-jaraco.context_6.0.1-1 python3-jaraco.functools_4.1.0-1 python3-jaraco.text_4.0.0-1 python3-minimal_3.13.9-2 python3-more-itertools_10.8.0-1 python3-numpy_1:2.3.5+ds-3 python3-numpy-dev_1:2.3.5+ds-3 python3-pkg-resources_78.1.1-0.1 python3-setuptools_78.1.1-0.1 python3-typeguard_4.4.4-1 python3-typing-extensions_4.15.0-2 python3-zipp_3.23.0-1 python3.13_3.13.11-1+b1 python3.13-dev_3.13.11-1+b1 python3.13-minimal_3.13.11-1+b1 python3.14_3.14.2-1+b1 python3.14-dev_3.14.2-1+b1 python3.14-minimal_3.14.2-1+b1 readline-common_8.3-3 rpcsvc-proto_1.4.3-1 sed_4.9-2 sensible-utils_0.0.26 swig_4.4.0-1 sysvinit-utils_3.15-6 tar_1.35+dfsg-3.1 tzdata_2025c-3 util-linux_2.41.3-3 xz-utils_5.8.2-1 zlib1g_1:1.3.dfsg+really1.3.1-1+b2 zlib1g-dev_1:1.3.dfsg+really1.3.1-1+b2 +------------------------------------------------------------------------------+ | Build Mon, 26 Jan 2026 04:59:49 +0000 | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: consensuscore Binary: libconsensuscore-dev, python3-pbconsensuscore Architecture: any Version: 1.1.1+dfsg-9 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille , Homepage: https://github.com/PacificBiosciences/ConsensusCore Standards-Version: 4.7.3 Vcs-Browser: https://salsa.debian.org/med-team/consensuscore Vcs-Git: https://salsa.debian.org/med-team/consensuscore.git Testsuite: autopkgtest-pkg-python Build-Depends: debhelper-compat (= 13), dh-exec, dh-sequence-python3, architecture-is-64-bit [!i386], architecture-is-little-endian, libboost-dev, libsimde-dev, python3-all-dev, python3-numpy, python3-numpy-dev, python3-setuptools, swig Package-List: libconsensuscore-dev deb libdevel optional arch=any python3-pbconsensuscore deb python optional arch=any Checksums-Sha1: 06118ce273ef10180336ab071fd86dc60aea7168 363936 consensuscore_1.1.1+dfsg.orig.tar.xz ac12995d4ce310fb671f720f1229e09aef7f26c2 10340 consensuscore_1.1.1+dfsg-9.debian.tar.xz Checksums-Sha256: 47865e3769e2d6647003f70ffce68f8a5b2f69a6ae04ff27d106b3ec84660d82 363936 consensuscore_1.1.1+dfsg.orig.tar.xz 4db0ae878e268792a962af9d1bc855fe16811c67404673045a7ef2dabe5f458e 10340 consensuscore_1.1.1+dfsg-9.debian.tar.xz Files: 17991299008d1c01e25ce3984b7fe7bd 363936 consensuscore_1.1.1+dfsg.orig.tar.xz 949772e680d176bd186c5326388ebdcf 10340 consensuscore_1.1.1+dfsg-9.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEEj23hBDd/OxHnQXSHMfMURUShdBoFAmlgqxwRHHRjaGV0QGRl Ymlhbi5vcmcACgkQMfMURUShdBp7ZhAAvUnjkG3krPpq/gREqdP+b35fjw3OJN8w e0Y94gfMgaqrEBcSAtHOKjMkJQ5GchDLdu88C6OAO2OyIV58rDXaWHYq8YU5RmVK 57GZKb/B4viGxZXtcwyMPz4abCD92wk0FFvQR0h+uFpcAttSM3PF2zdzghFWyu0G DFsphVof8qwd9IhUr48XwAvcMj1RMW5PkJl/6WNblKsMtc82cgpCf6GkZkVhZmQJ 1WeqZHyGl6BQrr3O1dZ0DFBXOpvyaEyZ+I/FbYEgXJu9B0SrKMRBoXhkSUxv4DJk 1Cyh2VwJMIpFwydbaWWHuCCo7iub7D4Oqh4PN7CBdfdoHa2hh7WRIGPdjQqr3MQz 5NZTm1Hmc2iRYHw6pyAgtJz44s27u2GYPMUWOQhHzj1vJsKK5AmGlfVNgq5EjG9b lR0Aef/hgCJGJHk9I2pE36DvnBaCXf4C1wW2Yk6GzTVsB0wZjI/r/qeYEZI8EWGu MIxfTmvoLjQAxp2ZLNoTgm16zPPDkRtk1V+OCRrjkvQFzK7QFfam03TSmf4/vp/B w2ePIh1elkHuy6XEEQzeVLFzcb7x+bceLu+tnp6GOJizQsMMV97A0gBtxd9qio05 wAi85Ot7AxA3xloDHrDM4GqhM+3+aeV2UD+WFwWdG8r92Pe6p0E5LO2h5IXqsogy noTyYyFm1uc= =ecdP -----END PGP SIGNATURE----- dpkg-source: warning: cannot verify inline signature for ./consensuscore_1.1.1+dfsg-9.dsc: missing OpenPGP keyrings dpkg-source: info: verifying ./consensuscore_1.1.1+dfsg-9.dsc dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-keyring.pgp dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-tag2upload.pgp dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-nonupload.pgp dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-maintainers.pgp dpkg-source: info: extracting consensuscore in /build/reproducible-path/consensuscore-1.1.1+dfsg dpkg-source: info: unpacking consensuscore_1.1.1+dfsg.orig.tar.xz dpkg-source: info: unpacking consensuscore_1.1.1+dfsg-9.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying spelling.patch dpkg-source: info: applying compiler-flags.patch dpkg-source: info: applying gcc-6.patch dpkg-source: info: applying 2to3.patch dpkg-source: info: applying check_boost_version.patch dpkg-source: info: applying sequence_setuptools.patch dpkg-source: info: applying portable_simd.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=6 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LC_COLLATE=C.UTF-8 LC_CTYPE=C.UTF-8 LOGNAME=sbuild PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SHELL=/bin/sh SOURCE_DATE_EPOCH=1767942230 USER=sbuild dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -us -uc -B dpkg-buildpackage: info: source package consensuscore dpkg-buildpackage: info: source version 1.1.1+dfsg-9 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Alexandre Detiste dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --buildsystem=pybuild debian/rules execute_before_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' ! test -f src/SWIG/numpy.i.orig || mv -v src/SWIG/numpy.i.orig src/SWIG/numpy.i make[1]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' dh_auto_clean -O--buildsystem=pybuild I: pybuild base:384: python3.14 setup.py clean WARNING: '' not a valid package name; please use only .-separated package names in setup.py running clean removing '/build/reproducible-path/consensuscore-1.1.1+dfsg/.pybuild/cpython3_3.14_pbconsensuscore/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.14' does not exist -- can't clean it I: pybuild base:384: python3.13 setup.py clean WARNING: '' not a valid package name; please use only .-separated package names in setup.py running clean removing '/build/reproducible-path/consensuscore-1.1.1+dfsg/.pybuild/cpython3_3.13_pbconsensuscore/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.13' does not exist -- can't clean it dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary-arch dh binary-arch --buildsystem=pybuild dh_update_autotools_config -a -O--buildsystem=pybuild dh_autoreconf -a -O--buildsystem=pybuild dh_auto_configure -a -O--buildsystem=pybuild I: pybuild base:384: python3.14 setup.py config WARNING: '' not a valid package name; please use only .-separated package names in setup.py running config I: pybuild base:384: python3.13 setup.py config WARNING: '' not a valid package name; please use only .-separated package names in setup.py running config debian/rules execute_before_dh_auto_build make[1]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' test -f src/SWIG/numpy.i.orig || mv -v src/SWIG/numpy.i src/SWIG/numpy.i.orig renamed 'src/SWIG/numpy.i' -> 'src/SWIG/numpy.i.orig' cp /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include/numpy/numpy.i src/SWIG/numpy.i make[1]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' dh_auto_build -a -O--buildsystem=pybuild I: pybuild base:384: /usr/bin/python3.14 setup.py build WARNING: '' not a valid package name; please use only .-separated package names in setup.py running build ConsensusCore configuration summary ----------------------------------- BOOST = /usr/include/ SWIG = /usr/bin/swig SWIG_LIB = /usr/share/swig/4.4.0 PYTHON_INCLUDE = /usr/include/python3.14 NUMPY_INCLUDE = /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include DEBUG = CPP_STD = c++14 make[1]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make -f make/Cpp.mk -j8 make[2]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -c src/C++/Checksum.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Checksum.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -c src/C++/Feature.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Feature.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -c src/C++/Logging/Logging.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Logging.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -c src/C++/Statistics/Binomial.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Binomial.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -c src/C++/Edna/EdnaCounts.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/EdnaCounts.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -c src/C++/Quiver/SseRecursor.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SseRecursor.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -c src/C++/Quiver/Diploid.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Diploid.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -c src/C++/Quiver/MutationScorer.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MutationScorer.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Logging.o -MM src/C++/Logging/Logging.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Logging.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -c src/C++/Quiver/QuiverConfig.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/QuiverConfig.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Feature.o -MM src/C++/Feature.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Feature.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Diploid.o -MM src/C++/Quiver/Diploid.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Diploid.d src/C++/Quiver/MutationScorer.cpp: In instantiation of ‘ConsensusCore::MutationScorer::MutationScorer(const EvaluatorType&, const R&) [with R = ConsensusCore::SimpleRecursor; EvaluatorType = ConsensusCore::QvEvaluator]’: src/C++/Quiver/MutationScorer.cpp:190:16: required from here 190 | template class MutationScorer; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/MutationScorer.cpp:30:41: warning: catching polymorphic type ‘class ConsensusCore::AlphaBetaMismatchException’ by value [-Wcatch-value=] 30 | } catch (AlphaBetaMismatchException e) { | ^ src/C++/Quiver/MutationScorer.cpp: In instantiation of ‘ConsensusCore::MutationScorer::MutationScorer(const EvaluatorType&, const R&) [with R = ConsensusCore::SseRecursor; EvaluatorType = ConsensusCore::QvEvaluator]’: src/C++/Quiver/MutationScorer.cpp:191:16: required from here 191 | template class MutationScorer; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/MutationScorer.cpp:30:41: warning: catching polymorphic type ‘class ConsensusCore::AlphaBetaMismatchException’ by value [-Wcatch-value=] 30 | } catch (AlphaBetaMismatchException e) { | ^ src/C++/Quiver/MutationScorer.cpp: In instantiation of ‘ConsensusCore::MutationScorer::MutationScorer(const EvaluatorType&, const R&) [with R = ConsensusCore::SimpleRecursor; EvaluatorType = ConsensusCore::QvEvaluator]’: src/C++/Quiver/MutationScorer.cpp:192:16: required from here 192 | template class MutationScorer; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/MutationScorer.cpp:30:41: warning: catching polymorphic type ‘class ConsensusCore::AlphaBetaMismatchException’ by value [-Wcatch-value=] 30 | } catch (AlphaBetaMismatchException e) { | ^ src/C++/Quiver/MutationScorer.cpp: In instantiation of ‘ConsensusCore::MutationScorer::MutationScorer(const EvaluatorType&, const R&) [with R = ConsensusCore::SimpleRecursor; EvaluatorType = ConsensusCore::QvEvaluator]’: src/C++/Quiver/MutationScorer.cpp:193:16: required from here 193 | template class MutationScorer; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/MutationScorer.cpp:30:41: warning: catching polymorphic type ‘class ConsensusCore::AlphaBetaMismatchException’ by value [-Wcatch-value=] 30 | } catch (AlphaBetaMismatchException e) { | ^ src/C++/Quiver/MutationScorer.cpp: In instantiation of ‘ConsensusCore::MutationScorer::MutationScorer(const EvaluatorType&, const R&) [with R = ConsensusCore::SseRecursor; EvaluatorType = ConsensusCore::QvEvaluator]’: src/C++/Quiver/MutationScorer.cpp:194:16: required from here 194 | template class MutationScorer; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/MutationScorer.cpp:30:41: warning: catching polymorphic type ‘class ConsensusCore::AlphaBetaMismatchException’ by value [-Wcatch-value=] 30 | } catch (AlphaBetaMismatchException e) { | ^ src/C++/Quiver/MutationScorer.cpp: In instantiation of ‘ConsensusCore::MutationScorer::MutationScorer(const EvaluatorType&, const R&) [with R = ConsensusCore::SseRecursor; EvaluatorType = ConsensusCore::QvEvaluator]’: src/C++/Quiver/MutationScorer.cpp:195:16: required from here 195 | template class MutationScorer; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/MutationScorer.cpp:30:41: warning: catching polymorphic type ‘class ConsensusCore::AlphaBetaMismatchException’ by value [-Wcatch-value=] 30 | } catch (AlphaBetaMismatchException e) { | ^ src/C++/Quiver/MutationScorer.cpp: In instantiation of ‘ConsensusCore::MutationScorer::MutationScorer(const EvaluatorType&, const R&) [with R = ConsensusCore::SseRecursor; EvaluatorType = ConsensusCore::EdnaEvaluator]’: src/C++/Quiver/MutationScorer.cpp:196:16: required from here 196 | template class MutationScorer; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/MutationScorer.cpp:30:41: warning: catching polymorphic type ‘class ConsensusCore::AlphaBetaMismatchException’ by value [-Wcatch-value=] 30 | } catch (AlphaBetaMismatchException e) { | ^ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -c src/C++/Quiver/MutationEnumerator.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MutationEnumerator.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -c src/C++/Quiver/MultiReadMutationScorer.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MultiReadMutationScorer.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/EdnaCounts.o -MM src/C++/Edna/EdnaCounts.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/EdnaCounts.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/QuiverConfig.o -MM src/C++/Quiver/QuiverConfig.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/QuiverConfig.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -c src/C++/Quiver/QuiverConsensus.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/QuiverConsensus.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -c src/C++/Quiver/ReadScorer.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/ReadScorer.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MutationEnumerator.o -MM src/C++/Quiver/MutationEnumerator.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MutationEnumerator.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -c src/C++/Quiver/detail/RecursorBase.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/RecursorBase.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Checksum.o -MM src/C++/Checksum.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Checksum.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -c src/C++/Quiver/SimpleRecursor.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SimpleRecursor.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/ReadScorer.o -MM src/C++/Quiver/ReadScorer.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/ReadScorer.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -c src/C++/Coverage.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Coverage.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Binomial.o -MM src/C++/Statistics/Binomial.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Binomial.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MutationScorer.o -MM src/C++/Quiver/MutationScorer.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MutationScorer.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -c src/C++/Sequence.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Sequence.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -c src/C++/Mutation.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Mutation.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Sequence.o -MM src/C++/Sequence.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Sequence.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -c src/C++/Align/AffineAlignment.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/AffineAlignment.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Coverage.o -MM src/C++/Coverage.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Coverage.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -c src/C++/Align/AlignConfig.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/AlignConfig.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/AlignConfig.o -MM src/C++/Align/AlignConfig.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/AlignConfig.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -c src/C++/Align/PairwiseAlignment.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PairwiseAlignment.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/RecursorBase.o -MM src/C++/Quiver/detail/RecursorBase.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/RecursorBase.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -c src/C++/Align/LinearAlignment.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/LinearAlignment.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/AffineAlignment.o -MM src/C++/Align/AffineAlignment.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/AffineAlignment.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PairwiseAlignment.o -MM src/C++/Align/PairwiseAlignment.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PairwiseAlignment.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -c src/C++/Version.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Version.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -c src/C++/Poa/PoaConsensus.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaConsensus.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MultiReadMutationScorer.o -MM src/C++/Quiver/MultiReadMutationScorer.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MultiReadMutationScorer.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/LinearAlignment.o -MM src/C++/Align/LinearAlignment.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/LinearAlignment.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/QuiverConsensus.o -MM src/C++/Quiver/QuiverConsensus.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/QuiverConsensus.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -c src/C++/Poa/RangeFinder.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/RangeFinder.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -c src/C++/Poa/PoaGraphImpl.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraphImpl.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -c src/C++/Poa/PoaGraphTraversals.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraphTraversals.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaConsensus.o -MM src/C++/Poa/PoaConsensus.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaConsensus.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -c src/C++/Poa/PoaGraph.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraph.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Version.o -MM src/C++/Version.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Version.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -c src/C++/Matrix/DenseMatrix.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/DenseMatrix.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Mutation.o -MM src/C++/Mutation.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Mutation.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -c src/C++/Matrix/SparseMatrix.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SparseMatrix.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraph.o -MM src/C++/Poa/PoaGraph.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraph.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SparseMatrix.o -MM src/C++/Matrix/SparseMatrix.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SparseMatrix.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -c src/C++/Features.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Features.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -c src/C++/Utils.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Utils.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SimpleRecursor.o -MM src/C++/Quiver/SimpleRecursor.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SimpleRecursor.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/DenseMatrix.o -MM src/C++/Matrix/DenseMatrix.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/DenseMatrix.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -c src/C++/Read.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Read.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Utils.o -MM src/C++/Utils.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Utils.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/RangeFinder.o -MM src/C++/Poa/RangeFinder.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/RangeFinder.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Features.o -MM src/C++/Features.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Features.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Read.o -MM src/C++/Read.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Read.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraphTraversals.o -MM src/C++/Poa/PoaGraphTraversals.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraphTraversals.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SseRecursor.o -MM src/C++/Quiver/SseRecursor.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SseRecursor.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraphImpl.o -MM src/C++/Poa/PoaGraphImpl.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraphImpl.d ar crs /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Checksum.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Feature.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Logging.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Binomial.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/EdnaCounts.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SseRecursor.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Diploid.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MutationScorer.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/QuiverConfig.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MutationEnumerator.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MultiReadMutationScorer.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/QuiverConsensus.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/ReadScorer.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/RecursorBase.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SimpleRecursor.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Coverage.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Sequence.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Mutation.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/AffineAlignment.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/AlignConfig.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PairwiseAlignment.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/LinearAlignment.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Version.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaConsensus.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/RangeFinder.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraphImpl.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraphTraversals.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraph.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/DenseMatrix.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SparseMatrix.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Features.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Utils.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Read.o touch /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a make[2]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make -f make/Python.mk make[2]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python SWIG_LIB=/usr/share/swig/4.4.0 /usr/bin/swig -Wall -c++ -python -builtin -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -module ConsensusCore -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/ConsensusCore_wrap.cxx src/SWIG/ConsensusCore.i /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Feature.hpp:20: Warning 309: private inheritance from base 'boost::shared_array< T >' (ignored). /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Matrix/DenseMatrix.hpp:28: Warning 309: private inheritance from base 'boost_dense_matrix' (ignored). /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Poa/PoaConsensus.hpp:24: Warning 309: private inheritance from base 'noncopyable' (ignored). g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -pthread -shared -Wl,-O1 -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I /usr/include/python3.14 -I /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/ConsensusCore_wrap.cxx /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/_ConsensusCore.so make[2]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[1]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' I: pybuild base:384: /usr/bin/python3 setup.py build WARNING: '' not a valid package name; please use only .-separated package names in setup.py running build ConsensusCore configuration summary ----------------------------------- BOOST = /usr/include/ SWIG = /usr/bin/swig SWIG_LIB = /usr/share/swig/4.4.0 PYTHON_INCLUDE = /usr/include/python3.13 NUMPY_INCLUDE = /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include DEBUG = CPP_STD = c++14 make[1]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make -f make/Cpp.mk -j8 make[2]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[2]: '/build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a' is up to date. make[2]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make -f make/Python.mk make[2]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python SWIG_LIB=/usr/share/swig/4.4.0 /usr/bin/swig -Wall -c++ -python -builtin -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -module ConsensusCore -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/ConsensusCore_wrap.cxx src/SWIG/ConsensusCore.i /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Feature.hpp:20: Warning 309: private inheritance from base 'boost::shared_array< T >' (ignored). /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Matrix/DenseMatrix.hpp:28: Warning 309: private inheritance from base 'boost_dense_matrix' (ignored). /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Poa/PoaConsensus.hpp:24: Warning 309: private inheritance from base 'noncopyable' (ignored). g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -pthread -shared -Wl,-O1 -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I /usr/include/python3.13 -I /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/ConsensusCore_wrap.cxx /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/_ConsensusCore.so make[2]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[1]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' /usr/bin/make test make[2]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' /usr/bin/make -f make/Cpp.mk -j8 make[3]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[3]: '/build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a' is up to date. make[3]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[3]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestMatrixFacades.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMatrixFacades.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestMutations.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMutations.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestCoverage.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestCoverage.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestDiploidQuiver.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestDiploidQuiver.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestQvEvaluator.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestQvEvaluator.o In file included from /usr/include/boost/bind/detail/requires_cxx11.hpp:9, from /usr/include/boost/bind/bind.hpp:24, from /usr/include/boost/bind.hpp:29, from /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestQvEvaluator.cpp:5: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestMutationEnumerator.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMutationEnumerator.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestPoaConsensus.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestPoaConsensus.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestMutationScorer.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMutationScorer.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestMultiReadMutationScorer.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMultiReadMutationScorer.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestPairwiseAlignment.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestPairwiseAlignment.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestRecursors.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestRecursors.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/ParameterSettings.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/ParameterSettings.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestSparseVector.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestSparseVector.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMatrixFacades.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMutations.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestCoverage.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestDiploidQuiver.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestQvEvaluator.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMutationEnumerator.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestPoaConsensus.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMutationScorer.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMultiReadMutationScorer.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestPairwiseAlignment.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestRecursors.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/ParameterSettings.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestSparseVector.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 /build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0/gmock-gtest-all.cc /build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0/gmock_main.cc -lpthread -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/test-runner GTEST_OUTPUT="xml:tests-summary.xml" /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/test-runner Running main() from gmock_main.cc [==========] Running 158 tests from 29 test cases. [----------] Global test environment set-up. [----------] 11 tests from MatrixTest/0, where TypeParam = ConsensusCore::DenseMatrix [ RUN ] MatrixTest/0.Basic [ OK ] MatrixTest/0.Basic (0 ms) [ RUN ] MatrixTest/0.Nullability [ OK ] MatrixTest/0.Nullability (0 ms) [ RUN ] MatrixTest/0.Ranges [ OK ] MatrixTest/0.Ranges (0 ms) [ RUN ] MatrixTest/0.IsColumnEmpty [ OK ] MatrixTest/0.IsColumnEmpty (0 ms) [ RUN ] MatrixTest/0.SSE [ OK ] MatrixTest/0.SSE (0 ms) [ RUN ] MatrixTest/0.ToHostArray [ OK ] MatrixTest/0.ToHostArray (0 ms) [ RUN ] MatrixTest/0.NonSequentialAccess [ OK ] MatrixTest/0.NonSequentialAccess (0 ms) [ RUN ] MatrixTest/0.Holes [ OK ] MatrixTest/0.Holes (0 ms) [ RUN ] MatrixTest/0.BigBandedMatrix N13ConsensusCore11DenseMatrixE : 1000000 [ OK ] MatrixTest/0.BigBandedMatrix (3 ms) [ RUN ] MatrixTest/0.BigIrregularBandedMatrix [ OK ] MatrixTest/0.BigIrregularBandedMatrix (0 ms) [ RUN ] MatrixTest/0.CopyTest [ OK ] MatrixTest/0.CopyTest (0 ms) [----------] 11 tests from MatrixTest/0 (3 ms total) [----------] 11 tests from MatrixTest/1, where TypeParam = ConsensusCore::SparseMatrix [ RUN ] MatrixTest/1.Basic [ OK ] MatrixTest/1.Basic (0 ms) [ RUN ] MatrixTest/1.Nullability [ OK ] MatrixTest/1.Nullability (0 ms) [ RUN ] MatrixTest/1.Ranges [ OK ] MatrixTest/1.Ranges (0 ms) [ RUN ] MatrixTest/1.IsColumnEmpty [ OK ] MatrixTest/1.IsColumnEmpty (0 ms) [ RUN ] MatrixTest/1.SSE [ OK ] MatrixTest/1.SSE (0 ms) [ RUN ] MatrixTest/1.ToHostArray [ OK ] MatrixTest/1.ToHostArray (0 ms) [ RUN ] MatrixTest/1.NonSequentialAccess [ OK ] MatrixTest/1.NonSequentialAccess (0 ms) [ RUN ] MatrixTest/1.Holes [ OK ] MatrixTest/1.Holes (0 ms) [ RUN ] MatrixTest/1.BigBandedMatrix N13ConsensusCore12SparseMatrixE : 1001976 [ OK ] MatrixTest/1.BigBandedMatrix (7 ms) [ RUN ] MatrixTest/1.BigIrregularBandedMatrix [ OK ] MatrixTest/1.BigIrregularBandedMatrix (0 ms) [ RUN ] MatrixTest/1.CopyTest [ OK ] MatrixTest/1.CopyTest (0 ms) [----------] 11 tests from MatrixTest/1 (7 ms total) [----------] 7 tests from MutationTest [ RUN ] MutationTest.BasicTest [ OK ] MutationTest.BasicTest (0 ms) [ RUN ] MutationTest.DeleteTest [ OK ] MutationTest.DeleteTest (0 ms) [ RUN ] MutationTest.InsertTest [ OK ] MutationTest.InsertTest (0 ms) [ RUN ] MutationTest.ApplyMutationsTest [ OK ] MutationTest.ApplyMutationsTest (0 ms) [ RUN ] MutationTest.ApplyMutationsToSamePositionTest [ OK ] MutationTest.ApplyMutationsToSamePositionTest (0 ms) [ RUN ] MutationTest.MutationsToTranscript [ OK ] MutationTest.MutationsToTranscript (0 ms) [ RUN ] MutationTest.MutatedTemplatePositionsTest [ OK ] MutationTest.MutatedTemplatePositionsTest (0 ms) [----------] 7 tests from MutationTest (0 ms total) [----------] 3 tests from CoverageTests [ RUN ] CoverageTests.CoverageInWindowTest [ OK ] CoverageTests.CoverageInWindowTest (0 ms) [ RUN ] CoverageTests.CoveredIntervalsTest [ OK ] CoverageTests.CoveredIntervalsTest (0 ms) [ RUN ] CoverageTests.CoveredIntervalsTest2 [ OK ] CoverageTests.CoveredIntervalsTest2 (0 ms) [----------] 3 tests from CoverageTests (0 ms total) [----------] 5 tests from QvEvaluatorTest [ RUN ] QvEvaluatorTest.IncVsInc4 [ OK ] QvEvaluatorTest.IncVsInc4 (43 ms) [ RUN ] QvEvaluatorTest.DelVsDel4 [ OK ] QvEvaluatorTest.DelVsDel4 (42 ms) [ RUN ] QvEvaluatorTest.ExtraVsExtra4 [ OK ] QvEvaluatorTest.ExtraVsExtra4 (53 ms) [ RUN ] QvEvaluatorTest.MergeVsMerge4 [ OK ] QvEvaluatorTest.MergeVsMerge4 (37 ms) [ RUN ] QvEvaluatorTest.BadTagTest [ OK ] QvEvaluatorTest.BadTagTest (3 ms) [----------] 5 tests from QvEvaluatorTest (179 ms total) [----------] 4 tests from MutationEnumerationTest [ RUN ] MutationEnumerationTest.TestAllMutations [ OK ] MutationEnumerationTest.TestAllMutations (0 ms) [ RUN ] MutationEnumerationTest.TestUniqueMutations [ OK ] MutationEnumerationTest.TestUniqueMutations (0 ms) [ RUN ] MutationEnumerationTest.TestUniqueNearbyMutations [ OK ] MutationEnumerationTest.TestUniqueNearbyMutations (1 ms) [ RUN ] MutationEnumerationTest.TestDinucleotideMutations [ OK ] MutationEnumerationTest.TestDinucleotideMutations (1 ms) [----------] 4 tests from MutationEnumerationTest (2 ms total) [----------] 4 tests from PoaGraph [ RUN ] PoaGraph.SmallBasicTest [ OK ] PoaGraph.SmallBasicTest (0 ms) [ RUN ] PoaGraph.SmallExtraTests [ OK ] PoaGraph.SmallExtraTests (0 ms) [ RUN ] PoaGraph.SmallMismatchTests [ OK ] PoaGraph.SmallMismatchTests (0 ms) [ RUN ] PoaGraph.SmallDeletionTests [ OK ] PoaGraph.SmallDeletionTests (1 ms) [----------] 4 tests from PoaGraph (1 ms total) [----------] 8 tests from PoaConsensus [ RUN ] PoaConsensus.TestSimple [ OK ] PoaConsensus.TestSimple (0 ms) [ RUN ] PoaConsensus.TestOverhangSecond [ OK ] PoaConsensus.TestOverhangSecond (0 ms) [ RUN ] PoaConsensus.SmallSemiglobalTest [ OK ] PoaConsensus.SmallSemiglobalTest (0 ms) [ RUN ] PoaConsensus.SmallTilingTest [ OK ] PoaConsensus.SmallTilingTest (0 ms) [ RUN ] PoaConsensus.TestVerboseGraphVizOutput [ OK ] PoaConsensus.TestVerboseGraphVizOutput (0 ms) [ RUN ] PoaConsensus.TestLocalStaggered dot -Tpng local-staggered.dot > local-staggered.png sh: 1: dot: not found [ OK ] PoaConsensus.TestLocalStaggered (4 ms) [ RUN ] PoaConsensus.TestLongInsert [ OK ] PoaConsensus.TestLongInsert (0 ms) [ RUN ] PoaConsensus.NondeterminismRegressionTest [ OK ] PoaConsensus.NondeterminismRegressionTest (461 ms) [----------] 8 tests from PoaConsensus (465 ms total) [----------] 8 tests from MutationScorerTest/0, where TypeParam = ConsensusCore::SimpleRecursor [ RUN ] MutationScorerTest/0.BasicTest [ OK ] MutationScorerTest/0.BasicTest (0 ms) [ RUN ] MutationScorerTest/0.CopyTest [ OK ] MutationScorerTest/0.CopyTest (0 ms) [ RUN ] MutationScorerTest/0.MutationsAtBeginning [ OK ] MutationScorerTest/0.MutationsAtBeginning (0 ms) [ RUN ] MutationScorerTest/0.MutationsAtEnd [ OK ] MutationScorerTest/0.MutationsAtEnd (0 ms) [ RUN ] MutationScorerTest/0.TinyTemplate [ OK ] MutationScorerTest/0.TinyTemplate (0 ms) [ RUN ] MutationScorerTest/0.TemplateMutationWorkflow [ OK ] MutationScorerTest/0.TemplateMutationWorkflow (0 ms) [ RUN ] MutationScorerTest/0.DinucleotideInsertionTest [ OK ] MutationScorerTest/0.DinucleotideInsertionTest (1 ms) [ RUN ] MutationScorerTest/0.DinucleotideDeletionTest [ OK ] MutationScorerTest/0.DinucleotideDeletionTest (1 ms) [----------] 8 tests from MutationScorerTest/0 (2 ms total) [----------] 8 tests from MutationScorerTest/1, where TypeParam = ConsensusCore::SseRecursor [ RUN ] MutationScorerTest/1.BasicTest [ OK ] MutationScorerTest/1.BasicTest (0 ms) [ RUN ] MutationScorerTest/1.CopyTest [ OK ] MutationScorerTest/1.CopyTest (0 ms) [ RUN ] MutationScorerTest/1.MutationsAtBeginning [ OK ] MutationScorerTest/1.MutationsAtBeginning (0 ms) [ RUN ] MutationScorerTest/1.MutationsAtEnd [ OK ] MutationScorerTest/1.MutationsAtEnd (0 ms) [ RUN ] MutationScorerTest/1.TinyTemplate [ OK ] MutationScorerTest/1.TinyTemplate (0 ms) [ RUN ] MutationScorerTest/1.TemplateMutationWorkflow [ OK ] MutationScorerTest/1.TemplateMutationWorkflow (0 ms) [ RUN ] MutationScorerTest/1.DinucleotideInsertionTest [ OK ] MutationScorerTest/1.DinucleotideInsertionTest (1 ms) [ RUN ] MutationScorerTest/1.DinucleotideDeletionTest [ OK ] MutationScorerTest/1.DinucleotideDeletionTest (1 ms) [----------] 8 tests from MutationScorerTest/1 (2 ms total) [----------] 8 tests from MutationScorerTest/2, where TypeParam = ConsensusCore::SimpleRecursor [ RUN ] MutationScorerTest/2.BasicTest [ OK ] MutationScorerTest/2.BasicTest (0 ms) [ RUN ] MutationScorerTest/2.CopyTest [ OK ] MutationScorerTest/2.CopyTest (0 ms) [ RUN ] MutationScorerTest/2.MutationsAtBeginning [ OK ] MutationScorerTest/2.MutationsAtBeginning (0 ms) [ RUN ] MutationScorerTest/2.MutationsAtEnd [ OK ] MutationScorerTest/2.MutationsAtEnd (0 ms) [ RUN ] MutationScorerTest/2.TinyTemplate [ OK ] MutationScorerTest/2.TinyTemplate (0 ms) [ RUN ] MutationScorerTest/2.TemplateMutationWorkflow [ OK ] MutationScorerTest/2.TemplateMutationWorkflow (0 ms) [ RUN ] MutationScorerTest/2.DinucleotideInsertionTest [ OK ] MutationScorerTest/2.DinucleotideInsertionTest (1 ms) [ RUN ] MutationScorerTest/2.DinucleotideDeletionTest [ OK ] MutationScorerTest/2.DinucleotideDeletionTest (1 ms) [----------] 8 tests from MutationScorerTest/2 (2 ms total) [----------] 8 tests from MutationScorerTest/3, where TypeParam = ConsensusCore::SseRecursor [ RUN ] MutationScorerTest/3.BasicTest [ OK ] MutationScorerTest/3.BasicTest (0 ms) [ RUN ] MutationScorerTest/3.CopyTest [ OK ] MutationScorerTest/3.CopyTest (0 ms) [ RUN ] MutationScorerTest/3.MutationsAtBeginning [ OK ] MutationScorerTest/3.MutationsAtBeginning (0 ms) [ RUN ] MutationScorerTest/3.MutationsAtEnd [ OK ] MutationScorerTest/3.MutationsAtEnd (0 ms) [ RUN ] MutationScorerTest/3.TinyTemplate [ OK ] MutationScorerTest/3.TinyTemplate (0 ms) [ RUN ] MutationScorerTest/3.TemplateMutationWorkflow [ OK ] MutationScorerTest/3.TemplateMutationWorkflow (0 ms) [ RUN ] MutationScorerTest/3.DinucleotideInsertionTest [ OK ] MutationScorerTest/3.DinucleotideInsertionTest (1 ms) [ RUN ] MutationScorerTest/3.DinucleotideDeletionTest [ OK ] MutationScorerTest/3.DinucleotideDeletionTest (0 ms) [----------] 8 tests from MutationScorerTest/3 (1 ms total) [----------] 1 test from QuiverConfigTableTests [ RUN ] QuiverConfigTableTests.IllegalChemistry [ OK ] QuiverConfigTableTests.IllegalChemistry (0 ms) [----------] 1 test from QuiverConfigTableTests (0 ms total) [----------] 3 tests from MutationOrientationTests [ RUN ] MutationOrientationTests.ReadScoresMutation1 [ OK ] MutationOrientationTests.ReadScoresMutation1 (0 ms) [ RUN ] MutationOrientationTests.ReadScoresMutation2 [ OK ] MutationOrientationTests.ReadScoresMutation2 (0 ms) [ RUN ] MutationOrientationTests.OrientedMutation [ OK ] MutationOrientationTests.OrientedMutation (0 ms) [----------] 3 tests from MutationOrientationTests (0 ms total) [----------] 11 tests from MultiReadMutationScorerTest/0, where TypeParam = ConsensusCore::SseRecursor [ RUN ] MultiReadMutationScorerTest/0.Template [ OK ] MultiReadMutationScorerTest/0.Template (0 ms) [ RUN ] MultiReadMutationScorerTest/0.BasicTest [ OK ] MultiReadMutationScorerTest/0.BasicTest (1 ms) [ RUN ] MultiReadMutationScorerTest/0.ManyMutationTest [ OK ] MultiReadMutationScorerTest/0.ManyMutationTest (1 ms) [ RUN ] MultiReadMutationScorerTest/0.CopyConstructorTest [ OK ] MultiReadMutationScorerTest/0.CopyConstructorTest (0 ms) [ RUN ] MultiReadMutationScorerTest/0.ReverseStrandTest [ OK ] MultiReadMutationScorerTest/0.ReverseStrandTest (0 ms) [ RUN ] MultiReadMutationScorerTest/0.TestMutationsAtBeginning [ OK ] MultiReadMutationScorerTest/0.TestMutationsAtBeginning (0 ms) [ RUN ] MultiReadMutationScorerTest/0.TestMutationsAtEnd [ OK ] MultiReadMutationScorerTest/0.TestMutationsAtEnd (1 ms) [ RUN ] MultiReadMutationScorerTest/0.NonSpanningReadsTest1 [ OK ] MultiReadMutationScorerTest/0.NonSpanningReadsTest1 (0 ms) [ RUN ] MultiReadMutationScorerTest/0.CopyTest [ OK ] MultiReadMutationScorerTest/0.CopyTest (0 ms) [ RUN ] MultiReadMutationScorerTest/0.MultiBaseSubstitutionsAtBounds [ OK ] MultiReadMutationScorerTest/0.MultiBaseSubstitutionsAtBounds (0 ms) [ RUN ] MultiReadMutationScorerTest/0.MultiBaseIndelsAtBounds [ OK ] MultiReadMutationScorerTest/0.MultiBaseIndelsAtBounds (0 ms) [----------] 11 tests from MultiReadMutationScorerTest/0 (3 ms total) [----------] 3 tests from PairwiseAlignmentTests [ RUN ] PairwiseAlignmentTests.RepresentationTests [ OK ] PairwiseAlignmentTests.RepresentationTests (0 ms) [ RUN ] PairwiseAlignmentTests.GlobalAlignmentTests [ OK ] PairwiseAlignmentTests.GlobalAlignmentTests (0 ms) [ RUN ] PairwiseAlignmentTests.TargetPositionsInQueryTest [ OK ] PairwiseAlignmentTests.TargetPositionsInQueryTest (0 ms) [----------] 3 tests from PairwiseAlignmentTests (1 ms total) [----------] 2 tests from AffineAlignmentTests [ RUN ] AffineAlignmentTests.BasicTests [ OK ] AffineAlignmentTests.BasicTests (0 ms) [ RUN ] AffineAlignmentTests.LargeGapTest [ OK ] AffineAlignmentTests.LargeGapTest (9 ms) [----------] 2 tests from AffineAlignmentTests (9 ms total) [----------] 1 test from IupacAlignmentTests [ RUN ] IupacAlignmentTests.BasicTest [ OK ] IupacAlignmentTests.BasicTest (0 ms) [----------] 1 test from IupacAlignmentTests (0 ms total) [----------] 1 test from LinearAlignmentTests [ RUN ] LinearAlignmentTests.BasicTest [ OK ] LinearAlignmentTests.BasicTest (0 ms) [----------] 1 test from LinearAlignmentTests (0 ms total) [----------] 7 tests from RecursorTest/0, where TypeParam = ConsensusCore::SimpleRecursor [ RUN ] RecursorTest/0.SmallMatchTest [ OK ] RecursorTest/0.SmallMatchTest (0 ms) [ RUN ] RecursorTest/0.SmallMismatchTest [ OK ] RecursorTest/0.SmallMismatchTest (0 ms) [ RUN ] RecursorTest/0.SmallMergeTest [ OK ] RecursorTest/0.SmallMergeTest (0 ms) [ RUN ] RecursorTest/0.MediumSizedTest [ OK ] RecursorTest/0.MediumSizedTest (0 ms) [ RUN ] RecursorTest/0.LinkTest [ OK ] RecursorTest/0.LinkTest (1 ms) [ RUN ] RecursorTest/0.ExtendAlphaTest [ OK ] RecursorTest/0.ExtendAlphaTest (0 ms) [ RUN ] RecursorTest/0.ExtendBetaTest [ OK ] RecursorTest/0.ExtendBetaTest (0 ms) [----------] 7 tests from RecursorTest/0 (1 ms total) [----------] 7 tests from RecursorTest/1, where TypeParam = ConsensusCore::SseRecursor [ RUN ] RecursorTest/1.SmallMatchTest [ OK ] RecursorTest/1.SmallMatchTest (0 ms) [ RUN ] RecursorTest/1.SmallMismatchTest [ OK ] RecursorTest/1.SmallMismatchTest (0 ms) [ RUN ] RecursorTest/1.SmallMergeTest [ OK ] RecursorTest/1.SmallMergeTest (0 ms) [ RUN ] RecursorTest/1.MediumSizedTest [ OK ] RecursorTest/1.MediumSizedTest (1 ms) [ RUN ] RecursorTest/1.LinkTest [ OK ] RecursorTest/1.LinkTest (0 ms) [ RUN ] RecursorTest/1.ExtendAlphaTest [ OK ] RecursorTest/1.ExtendAlphaTest (0 ms) [ RUN ] RecursorTest/1.ExtendBetaTest [ OK ] RecursorTest/1.ExtendBetaTest (0 ms) [----------] 7 tests from RecursorTest/1 (1 ms total) [----------] 7 tests from RecursorTest/2, where TypeParam = ConsensusCore::SimpleRecursor [ RUN ] RecursorTest/2.SmallMatchTest [ OK ] RecursorTest/2.SmallMatchTest (0 ms) [ RUN ] RecursorTest/2.SmallMismatchTest [ OK ] RecursorTest/2.SmallMismatchTest (0 ms) [ RUN ] RecursorTest/2.SmallMergeTest [ OK ] RecursorTest/2.SmallMergeTest (0 ms) [ RUN ] RecursorTest/2.MediumSizedTest [ OK ] RecursorTest/2.MediumSizedTest (2 ms) [ RUN ] RecursorTest/2.LinkTest [ OK ] RecursorTest/2.LinkTest (0 ms) [ RUN ] RecursorTest/2.ExtendAlphaTest [ OK ] RecursorTest/2.ExtendAlphaTest (0 ms) [ RUN ] RecursorTest/2.ExtendBetaTest [ OK ] RecursorTest/2.ExtendBetaTest (0 ms) [----------] 7 tests from RecursorTest/2 (3 ms total) [----------] 7 tests from RecursorTest/3, where TypeParam = ConsensusCore::SseRecursor [ RUN ] RecursorTest/3.SmallMatchTest [ OK ] RecursorTest/3.SmallMatchTest (0 ms) [ RUN ] RecursorTest/3.SmallMismatchTest [ OK ] RecursorTest/3.SmallMismatchTest (0 ms) [ RUN ] RecursorTest/3.SmallMergeTest [ OK ] RecursorTest/3.SmallMergeTest (0 ms) [ RUN ] RecursorTest/3.MediumSizedTest [ OK ] RecursorTest/3.MediumSizedTest (2 ms) [ RUN ] RecursorTest/3.LinkTest [ OK ] RecursorTest/3.LinkTest (0 ms) [ RUN ] RecursorTest/3.ExtendAlphaTest [ OK ] RecursorTest/3.ExtendAlphaTest (0 ms) [ RUN ] RecursorTest/3.ExtendBetaTest [ OK ] RecursorTest/3.ExtendBetaTest (0 ms) [----------] 7 tests from RecursorTest/3 (2 ms total) [----------] 5 tests from RecursorFuzzTest/0, where TypeParam = ConsensusCore::SimpleRecursor [ RUN ] RecursorFuzzTest/0.AlphaBetaConcordance [ OK ] RecursorFuzzTest/0.AlphaBetaConcordance (11 ms) [ RUN ] RecursorFuzzTest/0.Alignment [ OK ] RecursorFuzzTest/0.Alignment (11 ms) [ RUN ] RecursorFuzzTest/0.LinkAlphaBeta [ OK ] RecursorFuzzTest/0.LinkAlphaBeta (12 ms) [ RUN ] RecursorFuzzTest/0.ExtendAlpha [ OK ] RecursorFuzzTest/0.ExtendAlpha (16 ms) [ RUN ] RecursorFuzzTest/0.ExtendBeta [ OK ] RecursorFuzzTest/0.ExtendBeta (15 ms) [----------] 5 tests from RecursorFuzzTest/0 (67 ms total) [----------] 5 tests from RecursorFuzzTest/1, where TypeParam = ConsensusCore::SseRecursor [ RUN ] RecursorFuzzTest/1.AlphaBetaConcordance [ OK ] RecursorFuzzTest/1.AlphaBetaConcordance (33 ms) [ RUN ] RecursorFuzzTest/1.Alignment [ OK ] RecursorFuzzTest/1.Alignment (33 ms) [ RUN ] RecursorFuzzTest/1.LinkAlphaBeta [ OK ] RecursorFuzzTest/1.LinkAlphaBeta (33 ms) [ RUN ] RecursorFuzzTest/1.ExtendAlpha [ OK ] RecursorFuzzTest/1.ExtendAlpha (16 ms) [ RUN ] RecursorFuzzTest/1.ExtendBeta [ OK ] RecursorFuzzTest/1.ExtendBeta (16 ms) [----------] 5 tests from RecursorFuzzTest/1 (132 ms total) [----------] 5 tests from RecursorFuzzTest/2, where TypeParam = ConsensusCore::SimpleRecursor [ RUN ] RecursorFuzzTest/2.AlphaBetaConcordance [ OK ] RecursorFuzzTest/2.AlphaBetaConcordance (43 ms) [ RUN ] RecursorFuzzTest/2.Alignment [ OK ] RecursorFuzzTest/2.Alignment (44 ms) [ RUN ] RecursorFuzzTest/2.LinkAlphaBeta [ OK ] RecursorFuzzTest/2.LinkAlphaBeta (53 ms) [ RUN ] RecursorFuzzTest/2.ExtendAlpha [ OK ] RecursorFuzzTest/2.ExtendAlpha (13 ms) [ RUN ] RecursorFuzzTest/2.ExtendBeta [ OK ] RecursorFuzzTest/2.ExtendBeta (13 ms) [----------] 5 tests from RecursorFuzzTest/2 (166 ms total) [----------] 5 tests from RecursorFuzzTest/3, where TypeParam = ConsensusCore::SseRecursor [ RUN ] RecursorFuzzTest/3.AlphaBetaConcordance [ OK ] RecursorFuzzTest/3.AlphaBetaConcordance (41 ms) [ RUN ] RecursorFuzzTest/3.Alignment [ OK ] RecursorFuzzTest/3.Alignment (41 ms) [ RUN ] RecursorFuzzTest/3.LinkAlphaBeta [ OK ] RecursorFuzzTest/3.LinkAlphaBeta (41 ms) [ RUN ] RecursorFuzzTest/3.ExtendAlpha [ OK ] RecursorFuzzTest/3.ExtendAlpha (13 ms) [ RUN ] RecursorFuzzTest/3.ExtendBeta [ OK ] RecursorFuzzTest/3.ExtendBeta (13 ms) [----------] 5 tests from RecursorFuzzTest/3 (150 ms total) [----------] 2 tests from SparseVectorTest [ RUN ] SparseVectorTest.BasicTest [ OK ] SparseVectorTest.BasicTest (0 ms) [ RUN ] SparseVectorTest.BasicTest2 [ OK ] SparseVectorTest.BasicTest2 (0 ms) [----------] 2 tests from SparseVectorTest (0 ms total) [----------] 1 test from SparseVector [ RUN ] SparseVector.CopyTest [ OK ] SparseVector.CopyTest (0 ms) [----------] 1 test from SparseVector (0 ms total) [----------] Global test environment tear-down [==========] 158 tests from 29 test cases ran. (1199 ms total) [ PASSED ] 158 tests. make[3]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[2]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' /usr/bin/make test-python make[2]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[3]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python SWIG_LIB=/usr/share/swig/4.4.0 /usr/bin/swig -Wall -c++ -python -builtin -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -module ConsensusCore -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/ConsensusCore_wrap.cxx src/SWIG/ConsensusCore.i /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Feature.hpp:20: Warning 309: private inheritance from base 'boost::shared_array< T >' (ignored). /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Matrix/DenseMatrix.hpp:28: Warning 309: private inheritance from base 'boost_dense_matrix' (ignored). /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Poa/PoaConsensus.hpp:24: Warning 309: private inheritance from base 'noncopyable' (ignored). g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -pthread -shared -Wl,-O1 -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I /usr/include/python3.13 -I /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/ConsensusCore_wrap.cxx /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/_ConsensusCore.so 1.0.2 Python3 build is OK! make[3]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[2]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[1]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' create-stamp debian/debhelper-build-stamp dh_testroot -a -O--buildsystem=pybuild dh_prep -a -O--buildsystem=pybuild dh_auto_install -a -O--buildsystem=pybuild I: pybuild base:384: /usr/bin/python3.14 setup.py install --root /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore WARNING: '' not a valid package name; please use only .-separated package names in setup.py running build ConsensusCore configuration summary ----------------------------------- BOOST = /usr/include/ SWIG = /usr/bin/swig SWIG_LIB = /usr/share/swig/4.4.0 PYTHON_INCLUDE = /usr/include/python3.14 NUMPY_INCLUDE = /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include DEBUG = CPP_STD = c++14 make[1]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make -f make/Cpp.mk -j8 make[2]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[2]: '/build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a' is up to date. make[2]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make -f make/Python.mk make[2]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python SWIG_LIB=/usr/share/swig/4.4.0 /usr/bin/swig -Wall -c++ -python -builtin -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -module ConsensusCore -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/ConsensusCore_wrap.cxx src/SWIG/ConsensusCore.i /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Feature.hpp:20: Warning 309: private inheritance from base 'boost::shared_array< T >' (ignored). /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Matrix/DenseMatrix.hpp:28: Warning 309: private inheritance from base 'boost_dense_matrix' (ignored). /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Poa/PoaConsensus.hpp:24: Warning 309: private inheritance from base 'noncopyable' (ignored). g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -pthread -shared -Wl,-O1 -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I /usr/include/python3.14 -I /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/ConsensusCore_wrap.cxx /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/_ConsensusCore.so make[2]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[1]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running install_lib running build_py copying build/Python/ConsensusCore.py -> /build/reproducible-path/consensuscore-1.1.1+dfsg/.pybuild/cpython3_3.14_pbconsensuscore/build copying build/Python/ConsensusCore.py -> /build/reproducible-path/consensuscore-1.1.1+dfsg/.pybuild/cpython3_3.14_pbconsensuscore/build copying build/Python/_ConsensusCore.so -> /build/reproducible-path/consensuscore-1.1.1+dfsg/.pybuild/cpython3_3.14_pbconsensuscore/build creating /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore/usr/lib/python3.14/dist-packages copying /build/reproducible-path/consensuscore-1.1.1+dfsg/.pybuild/cpython3_3.14_pbconsensuscore/build/_ConsensusCore.so -> /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore/usr/lib/python3.14/dist-packages copying /build/reproducible-path/consensuscore-1.1.1+dfsg/.pybuild/cpython3_3.14_pbconsensuscore/build/ConsensusCore.py -> /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore/usr/lib/python3.14/dist-packages byte-compiling /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore/usr/lib/python3.14/dist-packages/ConsensusCore.py to ConsensusCore.cpython-314.pyc running install_egg_info running egg_info creating build/Python/ConsensusCore.egg-info writing build/Python/ConsensusCore.egg-info/PKG-INFO writing dependency_links to build/Python/ConsensusCore.egg-info/dependency_links.txt writing top-level names to build/Python/ConsensusCore.egg-info/top_level.txt writing manifest file 'build/Python/ConsensusCore.egg-info/SOURCES.txt' reading manifest file 'build/Python/ConsensusCore.egg-info/SOURCES.txt' adding license file 'LICENSES' writing manifest file 'build/Python/ConsensusCore.egg-info/SOURCES.txt' Copying build/Python/ConsensusCore.egg-info to /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore/usr/lib/python3.14/dist-packages/ConsensusCore-1.0.2.egg-info Skipping SOURCES.txt running install_scripts I: pybuild base:384: /usr/bin/python3 setup.py install --root /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore WARNING: '' not a valid package name; please use only .-separated package names in setup.py running build ConsensusCore configuration summary ----------------------------------- BOOST = /usr/include/ SWIG = /usr/bin/swig SWIG_LIB = /usr/share/swig/4.4.0 PYTHON_INCLUDE = /usr/include/python3.13 NUMPY_INCLUDE = /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include DEBUG = CPP_STD = c++14 make[1]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make -f make/Cpp.mk -j8 make[2]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[2]: '/build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a' is up to date. make[2]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make -f make/Python.mk make[2]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python SWIG_LIB=/usr/share/swig/4.4.0 /usr/bin/swig -Wall -c++ -python -builtin -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -module ConsensusCore -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/ConsensusCore_wrap.cxx src/SWIG/ConsensusCore.i /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Feature.hpp:20: Warning 309: private inheritance from base 'boost::shared_array< T >' (ignored). /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Matrix/DenseMatrix.hpp:28: Warning 309: private inheritance from base 'boost_dense_matrix' (ignored). /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Poa/PoaConsensus.hpp:24: Warning 309: private inheritance from base 'noncopyable' (ignored). g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -fcf-protection -pthread -shared -Wl,-O1 -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I /usr/include/python3.13 -I /usr/lib/x86_64-linux-gnu/python3-numpy/numpy/_core/include /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/ConsensusCore_wrap.cxx /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/_ConsensusCore.so make[2]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[1]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running install_lib running build_py copying build/Python/ConsensusCore.py -> /build/reproducible-path/consensuscore-1.1.1+dfsg/.pybuild/cpython3_3.13_pbconsensuscore/build copying build/Python/ConsensusCore.py -> /build/reproducible-path/consensuscore-1.1.1+dfsg/.pybuild/cpython3_3.13_pbconsensuscore/build copying build/Python/_ConsensusCore.so -> /build/reproducible-path/consensuscore-1.1.1+dfsg/.pybuild/cpython3_3.13_pbconsensuscore/build creating /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore/usr/lib/python3.13/dist-packages copying /build/reproducible-path/consensuscore-1.1.1+dfsg/.pybuild/cpython3_3.13_pbconsensuscore/build/_ConsensusCore.so -> /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore/usr/lib/python3.13/dist-packages copying /build/reproducible-path/consensuscore-1.1.1+dfsg/.pybuild/cpython3_3.13_pbconsensuscore/build/ConsensusCore.py -> /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore/usr/lib/python3.13/dist-packages byte-compiling /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore/usr/lib/python3.13/dist-packages/ConsensusCore.py to ConsensusCore.cpython-313.pyc running install_egg_info running egg_info writing build/Python/ConsensusCore.egg-info/PKG-INFO writing dependency_links to build/Python/ConsensusCore.egg-info/dependency_links.txt writing top-level names to build/Python/ConsensusCore.egg-info/top_level.txt reading manifest file 'build/Python/ConsensusCore.egg-info/SOURCES.txt' adding license file 'LICENSES' writing manifest file 'build/Python/ConsensusCore.egg-info/SOURCES.txt' Copying build/Python/ConsensusCore.egg-info to /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore/usr/lib/python3.13/dist-packages/ConsensusCore-1.0.2.egg-info Skipping SOURCES.txt running install_scripts dh_install -a -O--buildsystem=pybuild debian/rules execute_after_dh_install make[1]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' find debian -name meson.build -delete make[1]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' dh_installdocs -a -O--buildsystem=pybuild dh_installchangelogs -a -O--buildsystem=pybuild dh_python3 -a -O--buildsystem=pybuild I: dh_python3 fs:521: renaming _ConsensusCore.so to _ConsensusCore.cpython-313-x86_64-linux-gnu.so I: dh_python3 fs:521: renaming _ConsensusCore.so to _ConsensusCore.cpython-314-x86_64-linux-gnu.so debian/rules execute_after_dh_python3 make[1]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' dh_numpy3 dh_numpy3: skipping binary package libconsensuscore-dev which does not depend on the NumPy C ABI make[1]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' dh_installsystemduser -a -O--buildsystem=pybuild dh_perl -a -O--buildsystem=pybuild dh_link -a -O--buildsystem=pybuild dh_strip_nondeterminism -a -O--buildsystem=pybuild dh_compress -a -O--buildsystem=pybuild dh_fixperms -a -O--buildsystem=pybuild dh_missing -a -O--buildsystem=pybuild dh_dwz -a -O--buildsystem=pybuild dh_strip -a -O--buildsystem=pybuild dh_makeshlibs -a -O--buildsystem=pybuild dh_shlibdeps -a -O--buildsystem=pybuild dh_installdeb -a -O--buildsystem=pybuild dh_gencontrol -a -O--buildsystem=pybuild dpkg-gencontrol: warning: Depends field of package libconsensuscore-dev: substitution variable ${shlibs:Depends} used, but is not defined dh_md5sums -a -O--buildsystem=pybuild dh_builddeb -a -O--buildsystem=pybuild dpkg-deb: building package 'libconsensuscore-dev' in '../libconsensuscore-dev_1.1.1+dfsg-9_amd64.deb'. dpkg-deb: building package 'python3-pbconsensuscore-dbgsym' in '../python3-pbconsensuscore-dbgsym_1.1.1+dfsg-9_amd64.deb'. dpkg-deb: building package 'python3-pbconsensuscore' in '../python3-pbconsensuscore_1.1.1+dfsg-9_amd64.deb'. dpkg-genbuildinfo --build=any -O../consensuscore_1.1.1+dfsg-9_amd64.buildinfo dpkg-genchanges --build=any -O../consensuscore_1.1.1+dfsg-9_amd64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2026-01-26T05:06:12Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes Mon, 26 Jan 2026 05:06:13 +0000 | +------------------------------------------------------------------------------+ consensuscore_1.1.1+dfsg-9_amd64.changes: ----------------------------------------- Format: 1.8 Date: Fri, 09 Jan 2026 08:03:50 +0100 Source: consensuscore Binary: libconsensuscore-dev python3-pbconsensuscore python3-pbconsensuscore-dbgsym Architecture: amd64 Version: 1.1.1+dfsg-9 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Alexandre Detiste Description: libconsensuscore-dev - algorithms for PacBio multiple sequence consensus -- development python3-pbconsensuscore - algorithms for PacBio multiple sequence consensus -- Python 3 Changes: consensuscore (1.1.1+dfsg-9) unstable; urgency=medium . * Team upload. * Apply Multi-Arch: hint * Drop "Rules-Requires-Root: no": it is now the default * Bump Standards-Version to 4.7.3, drop Priority: tag * Refresh d/salsa-ci.yml Checksums-Sha1: a5a8f87a9c77acba18f1b9ce571e1a6529d3325b 7080 consensuscore_1.1.1+dfsg-9_amd64.buildinfo da1fc444a859db9cb605560a07554d120475b6fa 487164 libconsensuscore-dev_1.1.1+dfsg-9_amd64.deb 3159d6d04563c72a477f7d246189200e5af468a8 17190348 python3-pbconsensuscore-dbgsym_1.1.1+dfsg-9_amd64.deb fe9ea5bfc97ed71f3cc24411a0b4e69c9d1986b1 942500 python3-pbconsensuscore_1.1.1+dfsg-9_amd64.deb Checksums-Sha256: 4536f2f291deab4bab9b621488456f0b086bf075fbac66f35cf73abfc1f81725 7080 consensuscore_1.1.1+dfsg-9_amd64.buildinfo b0a1da4c92388d72b3c055781dff861d41fa022fa3951f2e442edc33ec2c1dfd 487164 libconsensuscore-dev_1.1.1+dfsg-9_amd64.deb 59ecbaef2248e8378f6bfe7eb1ce1fa284f887d61912b17aa9a17eab8cb3e15d 17190348 python3-pbconsensuscore-dbgsym_1.1.1+dfsg-9_amd64.deb cf84b6846597b52cd502688a3ff1624e1238500a4ff4342689b72d4de01b47bc 942500 python3-pbconsensuscore_1.1.1+dfsg-9_amd64.deb Files: ae93e5e74d529fb654c77b230792e332 7080 science optional consensuscore_1.1.1+dfsg-9_amd64.buildinfo e972727b5e59cd9361760ec9b42fdc78 487164 libdevel optional libconsensuscore-dev_1.1.1+dfsg-9_amd64.deb a72393414a735d6232fe90d006030830 17190348 debug optional python3-pbconsensuscore-dbgsym_1.1.1+dfsg-9_amd64.deb b9bba548455278d90eab14adbe02d55b 942500 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libquadmath0 (= 15.2.0-12), libreadline8t64 (= 8.3-3), libseccomp2 (= 2.6.0-2+b1), libselinux1 (= 3.9-4+b1), libsframe2 (= 2.45.50.20251209-1), libsimde-dev (= 0.8.2-3), libsmartcols1 (= 2.41.3-3), libsqlite3-0 (= 3.46.1-8), libssl3t64 (= 3.5.4-1), libstdc++-15-dev (= 15.2.0-12), libstdc++6 (= 15.2.0-12), libsystemd0 (= 259-1), libtinfo6 (= 6.6+20251231-1), libtool (= 2.5.4-9), libtsan2 (= 15.2.0-12), libubsan1 (= 15.2.0-12), libuchardet0 (= 0.0.8-2), libudev1 (= 259-1), libunistring5 (= 1.3-2), libuuid1 (= 2.41.3-3), libxml2-16 (= 2.15.1+dfsg-2+b1), libzstd1 (= 1.5.7+dfsg-3), linux-libc-dev (= 6.18.3-1), m4 (= 1.4.20-2), make (= 4.4.1-3), man-db (= 2.13.1-1), mawk (= 1.3.4.20250131-2), media-types (= 14.0.0), ncurses-base (= 6.6+20251231-1), ncurses-bin (= 6.6+20251231-1), netbase (= 6.5), openssl-provider-legacy (= 3.5.4-1), patch (= 2.8-2), perl (= 5.40.1-7), perl-base (= 5.40.1-7), perl-modules-5.40 (= 5.40.1-7), po-debconf (= 1.0.22), python3 (= 3.13.9-2), python3-all (= 3.13.9-2), python3-all-dev (= 3.13.9-2), python3-autocommand (= 2.2.2-4), python3-dev (= 3.13.9-2), python3-inflect (= 7.5.0-1), python3-jaraco.context (= 6.0.1-1), python3-jaraco.functools (= 4.1.0-1), python3-jaraco.text (= 4.0.0-1), python3-minimal (= 3.13.9-2), python3-more-itertools (= 10.8.0-1), python3-numpy (= 1:2.3.5+ds-3), python3-numpy-dev (= 1:2.3.5+ds-3), python3-pkg-resources (= 78.1.1-0.1), python3-setuptools (= 78.1.1-0.1), python3-typeguard (= 4.4.4-1), python3-typing-extensions (= 4.15.0-2), python3-zipp (= 3.23.0-1), python3.13 (= 3.13.11-1+b1), python3.13-dev (= 3.13.11-1+b1), python3.13-minimal (= 3.13.11-1+b1), python3.14 (= 3.14.2-1+b1), python3.14-dev (= 3.14.2-1+b1), python3.14-minimal (= 3.14.2-1+b1), readline-common (= 8.3-3), rpcsvc-proto (= 1.4.3-1), sed (= 4.9-2), sensible-utils (= 0.0.26), swig (= 4.4.0-1), sysvinit-utils (= 3.15-6), tar (= 1.35+dfsg-3.1), tzdata (= 2025c-3), util-linux (= 2.41.3-3), xz-utils (= 5.8.2-1), zlib1g (= 1:1.3.dfsg+really1.3.1-1+b2), zlib1g-dev (= 1:1.3.dfsg+really1.3.1-1+b2) Environment: DEB_BUILD_OPTIONS="parallel=6" LANG="C.UTF-8" LC_COLLATE="C.UTF-8" LC_CTYPE="C.UTF-8" SOURCE_DATE_EPOCH="1767942230" +------------------------------------------------------------------------------+ | Package contents Mon, 26 Jan 2026 05:06:13 +0000 | +------------------------------------------------------------------------------+ libconsensuscore-dev_1.1.1+dfsg-9_amd64.deb ------------------------------------------- new Debian package, version 2.0. size 487164 bytes: control archive=2192 bytes. 751 bytes, 18 lines control 4321 bytes, 53 lines md5sums Package: libconsensuscore-dev Source: consensuscore Version: 1.1.1+dfsg-9 Architecture: amd64 Maintainer: Debian Med Packaging Team Installed-Size: 3399 Section: libdevel Priority: optional Multi-Arch: same Homepage: https://github.com/PacificBiosciences/ConsensusCore Description: algorithms for PacBio multiple sequence consensus -- development files ConsensusCore is a library of C++ algorithms for Pacific Biosciences multiple sequence consensus that powers Quiver (Python) and ConsensusTools (.NET). This library primarily exists as the backend for GenomicConsensus, which implements Quiver. . This package is part of the SMRT Analysis suite. It provides the header files and static library. drwxr-xr-x root/root 0 2026-01-09 07:03 ./ drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/ drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/include/ drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/include/ConsensusCore/ drwxr-xr-x root/root 0 2018-08-14 14:23 ./usr/include/ConsensusCore/Align/ -rw-r--r-- root/root 1214 2018-08-14 14:23 ./usr/include/ConsensusCore/Align/AffineAlignment.hpp -rw-r--r-- root/root 775 2018-08-14 14:23 ./usr/include/ConsensusCore/Align/AlignConfig.hpp -rw-r--r-- root/root 565 2018-08-14 14:23 ./usr/include/ConsensusCore/Align/LinearAlignment.hpp -rw-r--r-- root/root 1956 2018-08-14 14:23 ./usr/include/ConsensusCore/Align/PairwiseAlignment.hpp -rw-r--r-- root/root 196 2018-08-14 14:23 ./usr/include/ConsensusCore/Checksum.hpp -rw-r--r-- root/root 653 2018-08-14 14:23 ./usr/include/ConsensusCore/Coverage.hpp drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/include/ConsensusCore/Edna/ -rw-r--r-- root/root 792 2018-08-14 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./usr/include/ConsensusCore/Matrix/DenseMatrix.hpp -rw-r--r-- root/root 2697 2018-08-14 14:23 ./usr/include/ConsensusCore/Matrix/SparseMatrix-inl.hpp -rw-r--r-- root/root 1918 2026-01-09 07:03 ./usr/include/ConsensusCore/Matrix/SparseMatrix.hpp -rw-r--r-- root/root 5885 2018-08-14 14:23 ./usr/include/ConsensusCore/Matrix/SparseVector-inl.hpp -rw-r--r-- root/root 1619 2026-01-09 07:03 ./usr/include/ConsensusCore/Matrix/SparseVector.hpp -rw-r--r-- root/root 1812 2018-08-14 14:23 ./usr/include/ConsensusCore/Matrix/VectorL.hpp -rw-r--r-- root/root 2663 2018-08-14 14:23 ./usr/include/ConsensusCore/Mutation-inl.hpp -rw-r--r-- root/root 2399 2018-08-14 14:23 ./usr/include/ConsensusCore/Mutation.hpp drwxr-xr-x root/root 0 2018-08-14 14:23 ./usr/include/ConsensusCore/Poa/ -rw-r--r-- root/root 1801 2018-08-14 14:23 ./usr/include/ConsensusCore/Poa/PoaConsensus.hpp -rw-r--r-- root/root 1915 2018-08-14 14:23 ./usr/include/ConsensusCore/Poa/PoaGraph.hpp -rw-r--r-- root/root 1555 2018-08-14 14:23 ./usr/include/ConsensusCore/Poa/RangeFinder.hpp drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/include/ConsensusCore/Quiver/ -rw-r--r-- root/root 531 2018-08-14 14:23 ./usr/include/ConsensusCore/Quiver/Diploid.hpp -rw-r--r-- root/root 7338 2018-08-14 14:23 ./usr/include/ConsensusCore/Quiver/MultiReadMutationScorer.hpp -rw-r--r-- root/root 1178 2018-08-14 14:23 ./usr/include/ConsensusCore/Quiver/MutationEnumerator-inl.hpp -rw-r--r-- root/root 1776 2018-08-14 14:23 ./usr/include/ConsensusCore/Quiver/MutationEnumerator.hpp -rw-r--r-- root/root 1924 2018-08-14 14:23 ./usr/include/ConsensusCore/Quiver/MutationScorer.hpp -rw-r--r-- root/root 5260 2018-08-14 14:23 ./usr/include/ConsensusCore/Quiver/QuiverConfig.hpp -rw-r--r-- root/root 933 2018-08-14 14:23 ./usr/include/ConsensusCore/Quiver/QuiverConsensus.hpp -rw-r--r-- root/root 6723 2026-01-09 07:03 ./usr/include/ConsensusCore/Quiver/QvEvaluator.hpp -rw-r--r-- root/root 773 2018-08-14 14:23 ./usr/include/ConsensusCore/Quiver/ReadScorer.hpp -rw-r--r-- root/root 1474 2018-08-14 14:23 ./usr/include/ConsensusCore/Quiver/SimpleRecursor.hpp -rw-r--r-- root/root 1771 2018-08-14 14:23 ./usr/include/ConsensusCore/Quiver/SseRecursor.hpp drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/include/ConsensusCore/Quiver/detail/ -rw-r--r-- root/root 856 2018-08-14 14:23 ./usr/include/ConsensusCore/Quiver/detail/Combiner.hpp -rw-r--r-- root/root 1715 2018-08-14 14:23 ./usr/include/ConsensusCore/Quiver/detail/RecursorBase-inl.hpp -rw-r--r-- root/root 2535 2018-08-14 14:23 ./usr/include/ConsensusCore/Quiver/detail/RecursorBase.hpp -rw-r--r-- root/root 1306 2026-01-09 07:03 ./usr/include/ConsensusCore/Quiver/detail/SseMath.hpp -rw-r--r-- root/root 29211 2026-01-09 07:03 ./usr/include/ConsensusCore/Quiver/detail/sse_mathfun.h -rw-r--r-- root/root 891 2018-08-14 14:23 ./usr/include/ConsensusCore/Read.hpp -rw-r--r-- root/root 278 2018-08-14 14:23 ./usr/include/ConsensusCore/Sequence.hpp drwxr-xr-x root/root 0 2018-08-14 14:23 ./usr/include/ConsensusCore/Statistics/ -rw-r--r-- root/root 378 2018-08-14 14:23 ./usr/include/ConsensusCore/Statistics/Binomial.hpp -rw-r--r-- root/root 2483 2018-08-14 14:23 ./usr/include/ConsensusCore/Types.hpp -rw-r--r-- root/root 1093 2018-08-14 14:23 ./usr/include/ConsensusCore/Utils.hpp -rw-r--r-- root/root 433 2018-08-14 14:23 ./usr/include/ConsensusCore/Version.hpp drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/lib/ drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/lib/x86_64-linux-gnu/ -rw-r--r-- root/root 3309168 2026-01-09 07:03 ./usr/lib/x86_64-linux-gnu/libConsensusCore.a drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/share/ drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/share/doc/ drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/share/doc/libconsensuscore-dev/ -rw-r--r-- root/root 1157 2026-01-09 07:03 ./usr/share/doc/libconsensuscore-dev/changelog.Debian.gz -rw-r--r-- root/root 420 2018-08-14 14:23 ./usr/share/doc/libconsensuscore-dev/changelog.gz -rw-r--r-- root/root 5866 2026-01-09 07:01 ./usr/share/doc/libconsensuscore-dev/copyright python3-pbconsensuscore-dbgsym_1.1.1+dfsg-9_amd64.deb ----------------------------------------------------- new Debian package, version 2.0. size 17190348 bytes: control archive=660 bytes. 477 bytes, 12 lines control 312 bytes, 3 lines md5sums Package: python3-pbconsensuscore-dbgsym Source: consensuscore Version: 1.1.1+dfsg-9 Auto-Built-Package: debug-symbols Architecture: amd64 Maintainer: Debian Med Packaging Team Installed-Size: 17788 Depends: python3-pbconsensuscore (= 1.1.1+dfsg-9) Section: debug Priority: optional Description: debug symbols for python3-pbconsensuscore Build-Ids: 5619c3bcc4c7fb128f01335ac6d6e237b40ba958 60c0e596126765e9aa16613e7ce88b8a69700b9a drwxr-xr-x root/root 0 2026-01-09 07:03 ./ drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/ drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/lib/ drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/lib/debug/ drwxr-xr-x root/root 0 2026-01-09 07:03 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version 2.0. size 942500 bytes: control archive=1404 bytes. 872 bytes, 18 lines control 885 bytes, 9 lines md5sums 293 bytes, 12 lines * postinst #!/bin/sh 439 bytes, 12 lines * prerm #!/bin/sh Package: python3-pbconsensuscore Source: consensuscore Version: 1.1.1+dfsg-9 Architecture: amd64 Maintainer: Debian Med Packaging Team Installed-Size: 6119 Depends: python3 (<< 3.15), python3 (>= 3.13~), python3-numpy2-abi0 | python3-numpy-abi9, python3:any, libc6 (>= 2.29), libgcc-s1 (>= 3.4), libstdc++6 (>= 13.1) Section: python Priority: optional Homepage: https://github.com/PacificBiosciences/ConsensusCore Description: algorithms for PacBio multiple sequence consensus -- Python 3 ConsensusCore is a library of C++ algorithms for Pacific Biosciences multiple sequence consensus that powers Quiver (Python) and ConsensusTools (.NET). This library primarily exists as the backend for GenomicConsensus, which implements Quiver. . This package is part of the SMRT Analysis suite. It provides the Python3 bindings. drwxr-xr-x root/root 0 2026-01-09 07:03 ./ drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/ drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/lib/ drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/lib/python3/ drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/lib/python3/dist-packages/ drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/lib/python3/dist-packages/ConsensusCore-1.0.2.egg-info/ -rw-r--r-- root/root 2354 2026-01-09 07:03 ./usr/lib/python3/dist-packages/ConsensusCore-1.0.2.egg-info/PKG-INFO -rw-r--r-- root/root 1 2026-01-09 07:03 ./usr/lib/python3/dist-packages/ConsensusCore-1.0.2.egg-info/dependency_links.txt -rw-r--r-- root/root 15 2026-01-09 07:03 ./usr/lib/python3/dist-packages/ConsensusCore-1.0.2.egg-info/top_level.txt -rw-r--r-- root/root 486 2026-01-09 07:03 ./usr/lib/python3/dist-packages/ConsensusCore.py -rw-r--r-- root/root 3116432 2026-01-09 07:03 ./usr/lib/python3/dist-packages/_ConsensusCore.cpython-313-x86_64-linux-gnu.so -rw-r--r-- root/root 3120528 2026-01-09 07:03 ./usr/lib/python3/dist-packages/_ConsensusCore.cpython-314-x86_64-linux-gnu.so drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/share/ drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/share/doc/ drwxr-xr-x root/root 0 2026-01-09 07:03 ./usr/share/doc/python3-pbconsensuscore/ -rw-r--r-- root/root 1157 2026-01-09 07:03 ./usr/share/doc/python3-pbconsensuscore/changelog.Debian.gz -rw-r--r-- root/root 420 2018-08-14 14:23 ./usr/share/doc/python3-pbconsensuscore/changelog.gz -rw-r--r-- root/root 5866 2026-01-09 07:01 ./usr/share/doc/python3-pbconsensuscore/copyright +------------------------------------------------------------------------------+ | Post Build Mon, 26 Jan 2026 05:06:15 +0000 | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup Mon, 26 Jan 2026 05:06:15 +0000 | +------------------------------------------------------------------------------+ Purging /build/reproducible-path Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary Mon, 26 Jan 2026 05:06:16 +0000 | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Type: any Build-Space: 282092 Build-Time: 382 Distribution: unstable Host Architecture: amd64 Install-Time: 3 Job: /srv/rebuilderd/tmp/rebuilderdbqWxAe/inputs/consensuscore_1.1.1+dfsg-9.dsc Machine Architecture: amd64 Package: consensuscore Package-Time: 393 Source-Version: 1.1.1+dfsg-9 Space: 282092 Status: successful Version: 1.1.1+dfsg-9 -------------------------------------------------------------------------------- Finished at 2026-01-26T05:06:12Z Build needed 00:06:33, 282092k disk space build artifacts stored in /srv/rebuilderd/tmp/rebuilderdbqWxAe/out checking libconsensuscore-dev_1.1.1+dfsg-9_amd64.deb: size differs for libconsensuscore-dev_1.1.1+dfsg-9_amd64.deb