=============================================================================== About this build: this rebuild has been done as part of reproduce.debian.net where we aim to reproduce Debian binary packages distributed via ftp.debian.org, by rebuilding using the exact same packages as the original build on the buildds, as described in the relevant .buildinfo file from buildinfos.debian.net. For more information please go to https://reproduce.debian.net or join #debian-reproducible on irc.debian.org =============================================================================== Preparing download of sources for /srv/rebuilderd/tmp/rebuilderd5TUQ7L/inputs/r-bioc-rsamtools_2.28.0+dfsg-1_amd64.buildinfo Source: r-bioc-rsamtools Version: 2.28.0+dfsg-1 rebuilderd-worker node: osuosl44-amd64 +------------------------------------------------------------------------------+ | Downloading sources Tue, 04 Aug 2026 16:17:51 +0000 | +------------------------------------------------------------------------------+ Get:1 https://deb.debian.org/debian trixie InRelease [140 kB] Get:2 https://deb.debian.org/debian-security trixie-security InRelease [43.4 kB] Get:3 https://deb.debian.org/debian trixie-updates InRelease [47.3 kB] Get:4 https://deb.debian.org/debian trixie-proposed-updates InRelease [57.6 kB] Get:5 https://deb.debian.org/debian trixie-backports InRelease [54.0 kB] Get:6 https://deb.debian.org/debian forky InRelease [151 kB] Get:7 https://deb.debian.org/debian sid InRelease [193 kB] Get:8 https://deb.debian.org/debian experimental InRelease [91.7 kB] Get:9 https://deb.debian.org/debian trixie/non-free-firmware Sources [6,552 B] Get:10 https://deb.debian.org/debian trixie/main Sources [10.5 MB] Get:11 https://deb.debian.org/debian-security trixie-security/non-free-firmware Sources [696 B] Get:12 https://deb.debian.org/debian-security trixie-security/main Sources [196 kB] Get:13 https://deb.debian.org/debian trixie-updates/main Sources [1,840 B] Get:14 https://deb.debian.org/debian trixie-proposed-updates/main Sources [141 kB] Get:15 https://deb.debian.org/debian trixie-backports/non-free-firmware Sources [3,396 B] Get:16 https://deb.debian.org/debian trixie-backports/main Sources [293 kB] Get:17 https://deb.debian.org/debian forky/non-free-firmware Sources [7,856 B] Get:18 https://deb.debian.org/debian forky/main Sources [11.1 MB] Get:19 https://deb.debian.org/debian sid/non-free-firmware Sources [10.6 kB] Get:20 https://deb.debian.org/debian sid/main Sources [11.8 MB] Get:21 https://deb.debian.org/debian experimental/main Sources [372 kB] Get:22 https://deb.debian.org/debian experimental/non-free-firmware Sources [2,568 B] Fetched 35.3 MB in 32s (1,093 kB/s) Reading package lists... 'https://deb.debian.org/debian/pool/main/r/r-bioc-rsamtools/r-bioc-rsamtools_2.28.0%2bdfsg-1.dsc' r-bioc-rsamtools_2.28.0+dfsg-1.dsc 2385 SHA256:b27756b117f46443288b46b3114b97ffcdaed059fbd624bcf2f0856546c6c04d 'https://deb.debian.org/debian/pool/main/r/r-bioc-rsamtools/r-bioc-rsamtools_2.28.0%2bdfsg.orig.tar.xz' r-bioc-rsamtools_2.28.0+dfsg.orig.tar.xz 1470804 SHA256:0c2d943a085ea0afbbe682fd6e47909d7b5d5e5b3ac70d76836f6e0a7257f37b 'https://deb.debian.org/debian/pool/main/r/r-bioc-rsamtools/r-bioc-rsamtools_2.28.0%2bdfsg-1.debian.tar.xz' r-bioc-rsamtools_2.28.0+dfsg-1.debian.tar.xz 7344 SHA256:786604869eeb7fb02c6213460f50950aa9fd5a7596a130258faa821ac1daf46d 0c2d943a085ea0afbbe682fd6e47909d7b5d5e5b3ac70d76836f6e0a7257f37b r-bioc-rsamtools_2.28.0+dfsg.orig.tar.xz 786604869eeb7fb02c6213460f50950aa9fd5a7596a130258faa821ac1daf46d r-bioc-rsamtools_2.28.0+dfsg-1.debian.tar.xz b27756b117f46443288b46b3114b97ffcdaed059fbd624bcf2f0856546c6c04d r-bioc-rsamtools_2.28.0+dfsg-1.dsc +------------------------------------------------------------------------------+ | Calling debrebuild Tue, 04 Aug 2026 16:18:25 +0000 | +------------------------------------------------------------------------------+ Rebuilding r-bioc-rsamtools=2.28.0+dfsg-1 in /srv/rebuilderd/tmp/rebuilderd5TUQ7L/inputs now. + /usr/bin/debrebuild --buildresult=/srv/rebuilderd/tmp/rebuilderd5TUQ7L/out --builder=sbuild+unshare --cache=/srv/rebuilderd/cache -- /srv/rebuilderd/tmp/rebuilderd5TUQ7L/inputs/r-bioc-rsamtools_2.28.0+dfsg-1_amd64.buildinfo /srv/rebuilderd/tmp/rebuilderd5TUQ7L/inputs/r-bioc-rsamtools_2.28.0+dfsg-1_amd64.buildinfo contains a GPG signature which has NOT been validated No Build-Path defined; not setting a defined build path for this build. I: verifying dsc... successful! Get:1 http://deb.debian.org/debian unstable InRelease [193 kB] Get:2 http://snapshot.debian.org/archive/debian/20260124T082420Z forky InRelease [137 kB] Get:3 http://snapshot.debian.org/archive/debian/20260617T203449Z forky InRelease [151 kB] Get:4 http://deb.debian.org/debian unstable/main amd64 Packages [10.7 MB] Get:5 http://snapshot.debian.org/archive/debian/20260124T082420Z forky/main amd64 Packages [9543 kB] Get:6 http://snapshot.debian.org/archive/debian/20260617T203449Z forky/main amd64 Packages [9769 kB] Fetched 30.5 MB in 5s (5898 kB/s) Reading package lists... W: http://snapshot.debian.org/archive/debian/20260124T082420Z/dists/forky/InRelease: Loading /etc/apt/trusted.gpg from deprecated option Dir::Etc::Trusted W: http://snapshot.debian.org/archive/debian/20260617T203449Z/dists/forky/InRelease: Loading /etc/apt/trusted.gpg from deprecated option Dir::Etc::Trusted Get:1 http://deb.debian.org/debian unstable/main amd64 gzip amd64 1.13-1 [138 kB] Fetched 138 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1covoe6q/gzip_1.13-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 r-cran-curl amd64 7.1.0+dfsg-2 [203 kB] Fetched 203 kB in 0s (4978 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4fnmxrbt/r-cran-curl_7.1.0+dfsg-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 make amd64 4.4.1-3 [463 kB] Fetched 463 kB in 0s (43.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmxi2b3w_/make_4.4.1-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 debhelper all 14.3 [934 kB] Fetched 934 kB in 0s (73.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnosemg0_/debhelper_14.3_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.26 [27.0 kB] Fetched 27.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4unorc47/sensible-utils_0.0.26_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 tzdata all 2026c-1 [260 kB] Fetched 260 kB in 0s (17.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4d4hebn0/tzdata_2026c-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libtry-tiny-perl all 0.32-1 [22.9 kB] Fetched 22.9 kB in 0s (2244 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8mfq5ik9/libtry-tiny-perl_0.32-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-11 [55.2 kB] Fetched 55.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzdhaprcp/libsasl2-2_2.1.28+dfsg1-11_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 r-cran-cpp11 all 0.5.5-1 [236 kB] Fetched 236 kB in 0s (5787 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2g88mx53/r-cran-cpp11_0.5.5-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libunistring-dev amd64 1.4.2-1 [651 kB] Fetched 651 kB in 0s (51.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmple6k_scm/libunistring-dev_1.4.2-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libaudit-common all 1:4.1.2-1 [14.3 kB] Fetched 14.3 kB in 0s (1421 kB/s) dpkg-name: info: moved 'libaudit-common_1%3a4.1.2-1_all.deb' to '/srv/rebuilderd/tmp/tmp3sg36h0q/libaudit-common_4.1.2-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libsub-exporter-progressive-perl all 0.001013-3 [7496 B] Fetched 7496 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzp8k5jls/libsub-exporter-progressive-perl_0.001013-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.21-1 [332 kB] Fetched 332 kB in 0s (30.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpahggkgui/m4_1.4.21-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 binutils amd64 2.47-2 [282 kB] Fetched 282 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmperra60j9/binutils_2.47-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 gfortran-x86-64-linux-gnu amd64 4:16.1.0-3 [1276 B] Fetched 1276 B in 0s (0 B/s) dpkg-name: info: moved 'gfortran-x86-64-linux-gnu_4%3a16.1.0-3_amd64.deb' to '/srv/rebuilderd/tmp/tmpm57636gr/gfortran-x86-64-linux-gnu_16.1.0-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 bzip2 amd64 1.0.8-6+b2 [40.4 kB] Fetched 40.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplpfqkd2j/bzip2_1.0.8-6+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libsmartcols1 amd64 2.42.2-2 [145 kB] Fetched 145 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdqspl50v/libsmartcols1_2.42.2-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxext6 amd64 2:1.3.4-1+b4 [50.7 kB] Fetched 50.7 kB in 0s (0 B/s) dpkg-name: info: moved 'libxext6_2%3a1.3.4-1+b4_amd64.deb' to '/srv/rebuilderd/tmp/tmpi4yx7aav/libxext6_1.3.4-1+b4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libdevel-globaldestruction-perl all 0.14-4 [7144 B] Fetched 7144 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgfdfkyd6/libdevel-globaldestruction-perl_0.14-4_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpixman-1-0 amd64 0.46.4-1+b2 [259 kB] Fetched 259 kB in 0s (24.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3mv0axgr/libpixman-1-0_0.46.4-1+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 gettext amd64 1.0-3 [2658 kB] Fetched 2658 kB in 0s (115 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4u4rxgnp/gettext_1.0-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpcre2-8-0 amd64 10.46-1+b2 [297 kB] Fetched 297 kB in 0s (27.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzmyzvyf4/libpcre2-8-0_10.46-1+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 fonts-urw-base35 all 20200910-9 [10.8 MB] Fetched 10.8 MB in 0s (163 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_haaeq8n/fonts-urw-base35_20200910-9_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 g++ amd64 4:16.1.0-3 [1340 B] Fetched 1340 B in 0s (0 B/s) dpkg-name: info: moved 'g++_4%3a16.1.0-3_amd64.deb' to '/srv/rebuilderd/tmp/tmpcf1wfu33/g++_16.1.0-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libdynaloader-functions-perl all 0.004-2 [12.2 kB] Fetched 12.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx99h1h3v/libdynaloader-functions-perl_0.004-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 xauth amd64 1:1.1.2-1.1 [35.9 kB] Fetched 35.9 kB in 0s (3494 kB/s) dpkg-name: info: moved 'xauth_1%3a1.1.2-1.1_amd64.deb' to '/srv/rebuilderd/tmp/tmp3ksx9f86/xauth_1.1.2-1.1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libdpkg-perl all 1.23.7 [669 kB] Fetched 669 kB in 0s (62.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6ocn7k0s/libdpkg-perl_1.23.7_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libsub-exporter-perl all 0.990-1 [50.6 kB] Fetched 50.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnxw3ngox/libsub-exporter-perl_0.990-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libicu78 amd64 78.3-2 [10.0 MB] Fetched 10.0 MB in 0s (180 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbfxbz4rd/libicu78_78.3-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libdeflate0 amd64 1.25-1 [48.0 kB] Fetched 48.0 kB in 0s (4614 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_p09n815/libdeflate0_1.25-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libjpeg-dev amd64 1:3.1.3-4 [78.8 kB] Fetched 78.8 kB in 0s (0 B/s) dpkg-name: info: moved 'libjpeg-dev_1%3a3.1.3-4_amd64.deb' to '/srv/rebuilderd/tmp/tmpsgrkpzwi/libjpeg-dev_3.1.3-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libperl5.42 amd64 5.42.2-3 [4245 kB] Fetched 4245 kB in 0s (152 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdboouqk1/libperl5.42_5.42.2-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 r-base-dev all 4.6.1-1 [2048 B] Fetched 2048 B in 0s (88.3 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5un9y_97/r-base-dev_4.6.1-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libencode-locale-perl all 1.05-3 [12.9 kB] Fetched 12.9 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp87tljmb2/libencode-locale-perl_1.05-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 fonts-liberation all 1:2.1.5-3 [1475 kB] Fetched 1475 kB in 0s (4374 kB/s) dpkg-name: info: moved 'fonts-liberation_1%3a2.1.5-3_all.deb' to '/srv/rebuilderd/tmp/tmpznf6gh13/fonts-liberation_2.1.5-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libctf-nobfd0 amd64 2.47-2 [160 kB] Fetched 160 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp421r63q7/libctf-nobfd0_2.47-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libedit2 amd64 3.1-20260512-1 [93.6 kB] Fetched 93.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjo2c6_oc/libedit2_3.1-20260512-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libbz2-dev amd64 1.0.8-6+b2 [33.6 kB] Fetched 33.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkp_nvesr/libbz2-dev_1.0.8-6+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 r-cran-crayon all 1.5.3-2 [164 kB] Fetched 164 kB in 0s (2643 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn9mtnnul/r-cran-crayon_1.5.3-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgfortran-16-dev amd64 16.1.0-3 [922 kB] Fetched 922 kB in 0s (70.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj60ex5p0/libgfortran-16-dev_16.1.0-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libreadline8t64 amd64 8.3-4 [181 kB] Fetched 181 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvm6dpymw/libreadline8t64_8.3-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgcc-16-dev amd64 16.1.0-3 [2780 kB] Fetched 2780 kB in 0s (126 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfl230pln/libgcc-16-dev_16.1.0-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libalgorithm-c3-perl all 0.11-2 [10.8 kB] Fetched 10.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjb48t3ro/libalgorithm-c3-perl_0.11-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 r-cran-snow all 1:0.4.4-2 [98.9 kB] Fetched 98.9 kB in 0s (3515 kB/s) dpkg-name: info: moved 'r-cran-snow_1%3a0.4.4-2_all.deb' to '/srv/rebuilderd/tmp/tmpt7iz5758/r-cran-snow_0.4.4-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 r-pkg-team-core-architecture amd64 20260707 [4764 B] Fetched 4764 B in 0s (194 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5cb28g61/r-pkg-team-core-architecture_20260707_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libthai-data all 0.1.30-3 [172 kB] Fetched 172 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpk0a9m1qa/libthai-data_0.1.30-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxdmcp6 amd64 1:1.1.5-2+b1 [28.2 kB] Fetched 28.2 kB in 0s (0 B/s) dpkg-name: info: moved 'libxdmcp6_1%3a1.1.5-2+b1_amd64.deb' to '/srv/rebuilderd/tmp/tmpzxes2q6n/libxdmcp6_1.1.5-2+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libatomic1 amd64 16.1.0-3 [10.4 kB] Fetched 10.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxze487t1/libatomic1_16.1.0-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libx11-6 amd64 2:1.8.13-1 [829 kB] Fetched 829 kB in 0s (70.5 MB/s) dpkg-name: info: moved 'libx11-6_2%3a1.8.13-1_amd64.deb' to '/srv/rebuilderd/tmp/tmps1wr1i7p/libx11-6_1.8.13-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 r-cran-httr all 1.4.8+dfsg-1 [471 kB] Fetched 471 kB in 0s (5879 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphak6nh89/r-cran-httr_1.4.8+dfsg-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpcre2-posix3 amd64 10.46-1+b2 [63.3 kB] Fetched 63.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt0bdvki5/libpcre2-posix3_10.46-1+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libglib2.0-0t64 amd64 2.88.3-2 [1536 kB] Fetched 1536 kB in 0s (104 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyw5t8fti/libglib2.0-0t64_2.88.3-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 bash amd64 5.3-3 [1559 kB] Fetched 1559 kB in 0s (94.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjcsgl8zc/bash_5.3-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libtext-charwidth-perl amd64 0.04-12+b1 [9344 B] Fetched 9344 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_g0b27jo/libtext-charwidth-perl_0.04-12+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 r-bioc-ucsc.utils all 1.8.0+dfsg-1 [78.7 kB] Fetched 78.7 kB in 0s (885 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv25o_85h/r-bioc-ucsc.utils_1.8.0+dfsg-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 librtmp-dev amd64 2.6-1 [69.7 kB] Fetched 69.7 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpla0jloan/librtmp-dev_2.6-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libmodule-runtime-conflicts-perl all 0.003-2 [7356 B] Fetched 7356 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdsx__095/libmodule-runtime-conflicts-perl_0.003-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libssl-dev amd64 3.6.3-1 [3025 kB] Fetched 3025 kB in 0s (135 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpw0vs2ktx/libssl-dev_3.6.3-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libclass-load-perl all 0.25-2 [15.3 kB] Fetched 15.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppcopeyz1/libclass-load-perl_0.25-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libsm6 amd64 2:1.2.6-1+b2 [37.9 kB] Fetched 37.9 kB in 0s (0 B/s) dpkg-name: info: moved 'libsm6_2%3a1.2.6-1+b2_amd64.deb' to '/srv/rebuilderd/tmp/tmpy9ig14qx/libsm6_1.2.6-1+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libtiff6 amd64 4.7.2-1 [383 kB] Fetched 383 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqu7botob/libtiff6_4.7.2-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpaper-utils amd64 2.2.5-0.4 [15.8 kB] Fetched 15.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2lmw7cbq/libpaper-utils_2.2.5-0.4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libfreetype6 amd64 2.14.3+dfsg-2 [492 kB] Fetched 492 kB in 0s (42.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgep94zgj/libfreetype6_2.14.3+dfsg-2_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260124T082420Z forky/main amd64 libopenblas0-pthread amd64 0.3.30+ds-3 [7479 kB] Fetched 7479 kB in 1s (9981 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph3elxh37/libopenblas0-pthread_0.3.30+ds-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 patch amd64 2.8-2 [134 kB] Fetched 134 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl5duhfb4/patch_2.8-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libaudit1 amd64 1:4.1.2-1+b1 [60.2 kB] Fetched 60.2 kB in 0s (0 B/s) dpkg-name: info: moved 'libaudit1_1%3a4.1.2-1+b1_amd64.deb' to '/srv/rebuilderd/tmp/tmpcuiiqo12/libaudit1_4.1.2-1+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 1.0-3 [332 kB] Fetched 332 kB in 0s (31.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbk_on3x4/gettext-base_1.0-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libssl3t64 amd64 3.6.3-1 [2488 kB] Fetched 2488 kB in 0s (116 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmuhxt58f/libssl3t64_3.6.3-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgc1 amd64 1:8.2.12-1 [253 kB] Fetched 253 kB in 0s (0 B/s) dpkg-name: info: moved 'libgc1_1%3a8.2.12-1_amd64.deb' to '/srv/rebuilderd/tmp/tmp_okse67x/libgc1_8.2.12-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 r-cran-openssl amd64 2.4.2+dfsg-1 [402 kB] Fetched 402 kB in 0s (9460 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3y4j9oqn/r-cran-openssl_2.4.2+dfsg-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgprofng0 amd64 2.47-2 [820 kB] Fetched 820 kB in 0s (63.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_p7tawta/libgprofng0_2.47-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libharfbuzz0b amd64 12.3.2-2+b2 [513 kB] Fetched 513 kB in 0s (49.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0flun6ei/libharfbuzz0b_12.3.2-2+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libidn2-0 amd64 2.3.8-5 [109 kB] Fetched 109 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8dj354zy/libidn2-0_2.3.8-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libexpat1 amd64 2.8.2-1 [121 kB] Fetched 121 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps2nmdj0m/libexpat1_2.8.2-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpng-dev amd64 1.6.58-1 [372 kB] Fetched 372 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfvdneykx/libpng-dev_1.6.58-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libmpc3 amd64 1.3.1-3 [52.2 kB] Fetched 52.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcn25f8_f/libmpc3_1.3.1-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libobjc-15-dev amd64 15.3.0-2 [173 kB] Fetched 173 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfze9k3qm/libobjc-15-dev_15.3.0-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.47-4 [43.0 kB] Fetched 43.0 kB in 0s (3818 kB/s) dpkg-name: info: moved 'file_1%3a5.47-4_amd64.deb' to '/srv/rebuilderd/tmp/tmpu0q3rlgn/file_5.47-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 fonts-noto-core all 20201225-6 [12.2 MB] Fetched 12.2 MB in 1s (11.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsi1xsbwb/fonts-noto-core_20201225-6_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libcom-err2 amd64 1.47.4-1 [19.2 kB] Fetched 19.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphjdqywnz/libcom-err2_1.47.4-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.22.1-3 [137 kB] Fetched 137 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp09urwp4g/libgssapi-krb5-2_1.22.1-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 x11-common all 1:7.7+26 [217 kB] Fetched 217 kB in 0s (0 B/s) dpkg-name: info: moved 'x11-common_1%3a7.7+26_all.deb' to '/srv/rebuilderd/tmp/tmpan9eu4fw/x11-common_7.7+26_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libbinutils amd64 2.47-2 [536 kB] Fetched 536 kB in 0s (52.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn4jw0p_p/libbinutils_2.47-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libkrb5-dev amd64 1.22.1-3 [14.0 kB] Fetched 14.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyk83lpkg/libkrb5-dev_1.22.1-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libssh2-1-dev amd64 1.11.1-5 [393 kB] Fetched 393 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8usl35_a/libssh2-1-dev_1.11.1-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxss1 amd64 1:1.2.3-1+b4 [17.0 kB] Fetched 17.0 kB in 0s (0 B/s) dpkg-name: info: moved 'libxss1_1%3a1.2.3-1+b4_amd64.deb' to '/srv/rebuilderd/tmp/tmpmr6gosgd/libxss1_1.2.3-1+b4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 gcc-16-base amd64 16.1.0-3 [37.5 kB] Fetched 37.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppc8_24ke/gcc-16-base_16.1.0-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libeval-closure-perl all 0.14-3 [11.2 kB] Fetched 11.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4iwgpt5r/libeval-closure-perl_0.14-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 liblapack-dev amd64 3.12.1-8 [5230 kB] Fetched 5230 kB in 0s (157 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8tn4l6bw/liblapack-dev_3.12.1-8_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.22 [216 kB] Fetched 216 kB in 0s (19.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpi45usoy3/po-debconf_1.0.22_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libnghttp3-9 amd64 1.17.0-1 [68.1 kB] Fetched 68.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp91kdcv3m/libnghttp3-9_1.17.0-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libkadm5clnt-mit12 amd64 1.22.1-3 [40.3 kB] Fetched 40.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppln8o3hi/libkadm5clnt-mit12_1.22.1-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 xz-utils amd64 5.8.3-1 [740 kB] Fetched 740 kB in 0s (67.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpken88k9r/xz-utils_5.8.3-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 fonts-noto-mono all 20201225-6 [386 kB] Fetched 386 kB in 0s (8646 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpukakag08/fonts-noto-mono_20201225-6_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libuuid1 amd64 2.42.2-2 [33.6 kB] Fetched 33.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3q8y6c3e/libuuid1_2.42.2-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libjansson4 amd64 2.15.1-1 [65.6 kB] Fetched 65.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdd1hwbjo/libjansson4_2.15.1-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 openssl-provider-legacy amd64 3.6.3-1 [320 kB] Fetched 320 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxyfli38r/openssl-provider-legacy_3.6.3-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-core all 2.37-9 [840 kB] Fetched 840 kB in 0s (74.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpafre19dr/fonts-dejavu-core_2.37-9_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxau6 amd64 1:1.0.11-1+b2 [20.7 kB] Fetched 20.7 kB in 0s (0 B/s) dpkg-name: info: moved 'libxau6_1%3a1.0.11-1+b2_amd64.deb' to '/srv/rebuilderd/tmp/tmpfommu9fq/libxau6_1.0.11-1+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libubsan1 amd64 16.1.0-3 [1136 kB] Fetched 1136 kB in 0s (79.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmb3_bj3e/libubsan1_16.1.0-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libseccomp2 amd64 2.6.1-1 [49.9 kB] Fetched 49.9 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwnz629rx/libseccomp2_2.6.1-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 22 [12.2 kB] Fetched 12.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmcsa4_89/dh-autoreconf_22_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20240727.1+nmu1 [60.0 kB] Fetched 60.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpamgbn5oi/autotools-dev_20240727.1+nmu1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libmount1 amd64 2.42.2-2 [215 kB] Fetched 215 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbfkxu5_k/libmount1_2.42.2-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libtk8.6 amd64 8.6.18-1 [801 kB] Fetched 801 kB in 0s (73.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpa67z9p5c/libtk8.6_8.6.18-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 cpp-15 amd64 15.3.0-2 [1272 B] Fetched 1272 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0wy55p1c/cpp-15_15.3.0-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libboost-dev amd64 1.90.0.2 [3064 B] Fetched 3064 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsvjoeud9/libboost-dev_1.90.0.2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 icu-devtools amd64 78.3-2 [212 kB] Fetched 212 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvwi492lo/icu-devtools_78.3-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 gcc-x86-64-linux-gnu amd64 4:16.1.0-3 [1432 B] Fetched 1432 B in 0s (0 B/s) dpkg-name: info: moved 'gcc-x86-64-linux-gnu_4%3a16.1.0-3_amd64.deb' to '/srv/rebuilderd/tmp/tmp_d4xfo89/gcc-x86-64-linux-gnu_16.1.0-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 gcc-15-base amd64 15.3.0-2 [37.7 kB] Fetched 37.7 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9v3eb7jr/gcc-15-base_15.3.0-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libproc2-1 amd64 2:4.0.6-3 [69.4 kB] Fetched 69.4 kB in 0s (0 B/s) dpkg-name: info: moved 'libproc2-1_2%3a4.0.6-3_amd64.deb' to '/srv/rebuilderd/tmp/tmp1_8q2sw2/libproc2-1_4.0.6-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libobjc4 amd64 16.1.0-3 [45.2 kB] Fetched 45.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2yhkxojh/libobjc4_16.1.0-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libkadm5srv-mit12 amd64 1.22.1-3 [54.1 kB] Fetched 54.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph2lxl29b/libkadm5srv-mit12_1.22.1-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libitm1 amd64 16.1.0-3 [27.0 kB] Fetched 27.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt8fjigu3/libitm1_16.1.0-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libasan8 amd64 16.1.0-3 [2889 kB] Fetched 2889 kB in 0s (129 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3m6hs0cf/libasan8_16.1.0-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 r-bioc-genomicranges all 1.64.0+dfsg-1 [2087 kB] Fetched 2087 kB in 0s (10.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1u8tn8id/r-bioc-genomicranges_1.64.0+dfsg-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 r-cran-r6 all 2.6.1-2 [106 kB] Fetched 106 kB in 0s (1987 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplo6dj13g/r-cran-r6_2.6.1-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libice6 amd64 2:1.1.1-1+b2 [66.8 kB] Fetched 66.8 kB in 0s (0 B/s) dpkg-name: info: moved 'libice6_2%3a1.1.1-1+b2_amd64.deb' to '/srv/rebuilderd/tmp/tmpubwzu6v7/libice6_1.1.1-1+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgdbm-compat4t64 amd64 1.26-1+b2 [52.0 kB] Fetched 52.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpelmlr_31/libgdbm-compat4t64_1.26-1+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 r-bioc-biocparallel amd64 1.46.0-1 [971 kB] Fetched 971 kB in 0s (5340 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpa21lc0up/r-bioc-biocparallel_1.46.0-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libngtcp2-crypto-ossl0 amd64 1.24.0-1 [26.5 kB] Fetched 26.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphouqmejg/libngtcp2-crypto-ossl0_1.24.0-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 liburi-perl all 5.35-1 [112 kB] Fetched 112 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz7n6mxk6/liburi-perl_5.35-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libctf0 amd64 2.47-2 [91.7 kB] Fetched 91.7 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpw3eovsfr/libctf0_2.47-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 sed amd64 4.9-3 [331 kB] Fetched 331 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpykelyfai/sed_4.9-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgfortran5 amd64 16.1.0-3 [878 kB] Fetched 878 kB in 0s (74.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3c_935ws/libgfortran5_16.1.0-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libio-html-perl all 1.004-3 [16.2 kB] Fetched 16.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqwvz6k6i/libio-html-perl_1.004-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 liblapack3 amd64 3.12.1-8 [2548 kB] Fetched 2548 kB in 0s (127 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4ok9g1ke/liblapack3_3.12.1-8_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.2-3 [918 kB] Fetched 918 kB in 0s (75.4 MB/s) dpkg-name: info: moved 'zlib1g-dev_1%3a1.3.dfsg+really1.3.2-3_amd64.deb' to '/srv/rebuilderd/tmp/tmpev95zdll/zlib1g-dev_1.3.dfsg+really1.3.2-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libncurses6 amd64 6.6+20260608-2 [107 kB] Fetched 107 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnmx1ddkw/libncurses6_6.6+20260608-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libp11-kit0 amd64 0.26.4-1 [471 kB] Fetched 471 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdksicnvz/libp11-kit0_0.26.4-1_amd64.deb' Downloading dependency 1 of 408: gzip:amd64=1.13-1 Downloading dependency 2 of 408: r-cran-curl:amd64=7.1.0+dfsg-2 Downloading dependency 3 of 408: make:amd64=4.4.1-3 Downloading dependency 4 of 408: debhelper:amd64=14.3 Downloading dependency 5 of 408: sensible-utils:amd64=0.0.26 Downloading dependency 6 of 408: tzdata:amd64=2026c-1 Downloading dependency 7 of 408: libtry-tiny-perl:amd64=0.32-1 Downloading dependency 8 of 408: libsasl2-2:amd64=2.1.28+dfsg1-11 Downloading dependency 9 of 408: r-cran-cpp11:amd64=0.5.5-1 Downloading dependency 10 of 408: libunistring-dev:amd64=1.4.2-1 Downloading dependency 11 of 408: libaudit-common:amd64=1:4.1.2-1 Downloading dependency 12 of 408: libsub-exporter-progressive-perl:amd64=0.001013-3 Downloading dependency 13 of 408: m4:amd64=1.4.21-1 Downloading dependency 14 of 408: binutils:amd64=2.47-2 Downloading dependency 15 of 408: gfortran-x86-64-linux-gnu:amd64=4:16.1.0-3 Downloading dependency 16 of 408: bzip2:amd64=1.0.8-6+b2 Downloading dependency 17 of 408: libsmartcols1:amd64=2.42.2-2 Downloading dependency 18 of 408: libxext6:amd64=2:1.3.4-1+b4 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libencode-locale-perl:amd64=1.05-3 Downloading dependency 35 of 408: fonts-liberation:amd64=1:2.1.5-3 Downloading dependency 36 of 408: libctf-nobfd0:amd64=2.47-2 Downloading dependency 37 of 408: libedit2:amd64=3.1-20260512-1 Downloading dependency 38 of 408: libbz2-dev:amd64=1.0.8-6+b2 Downloading dependency 39 of 408: r-cran-crayon:amd64=1.5.3-2 Downloading dependency 40 of 408: libgfortran-16-dev:amd64=16.1.0-3 Downloading dependency 41 of 408: libreadline8t64:amd64=8.3-4 Downloading dependency 42 of 408: libgcc-16-dev:amd64=16.1.0-3 Downloading dependency 43 of 408: libalgorithm-c3-perl:amd64=0.11-2 Downloading dependency 44 of 408: r-cran-snow:amd64=1:0.4.4-2 Downloading dependency 45 of 408: r-pkg-team-core-architecture:amd64=20260707 Downloading dependency 46 of 408: libthai-data:amd64=0.1.30-3 Downloading dependency 47 of 408: libxdmcp6:amd64=1:1.1.5-2+b1 Downloading dependency 48 of 408: libatomic1:amd64=16.1.0-3 Downloading dependency 49 of 408: libx11-6:amd64=2:1.8.13-1 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libgssapi-krb5-2:amd64=1.22.1-3 Downloading dependency 82 of 408: x11-common:amd64=1:7.7+26 Downloading dependency 83 of 408: libbinutils:amd64=2.47-2 Downloading dependency 84 of 408: libkrb5-dev:amd64=1.22.1-3 Downloading dependency 85 of 408: libssh2-1-dev:amd64=1.11.1-5 Downloading dependency 86 of 408: libxss1:amd64=1:1.2.3-1+b4 Downloading dependency 87 of 408: gcc-16-base:amd64=16.1.0-3 Downloading dependency 88 of 408: libeval-closure-perl:amd64=0.14-3 Downloading dependency 89 of 408: liblapack-dev:amd64=3.12.1-8 Downloading dependency 90 of 408: po-debconf:amd64=1.0.22 Downloading dependency 91 of 408: libnghttp3-9:amd64=1.17.0-1 Downloading dependency 92 of 408: libkadm5clnt-mit12:amd64=1.22.1-3 Downloading dependency 93 of 408: xz-utils:amd64=5.8.3-1 Downloading dependency 94 of 408: fonts-noto-mono:amd64=20201225-6 Downloading dependency 95 of 408: libuuid1:amd64=2.42.2-2 Downloading dependency 96 of 408: libjansson4:amd64=2.15.1-1 Downloading dependency 97 of 408: openssl-provider-legacy:amd64=3.6.3-1 Downloading dependency 98 of 408: fonts-dejavu-core:amd64=2.37-9 Downloading dependency 99 of 408: libxau6:amd64=1:1.0.11-1+b2 Downloading dependency 100 of 408: libubsan1:amd64=16.1.0-3 Downloading dependency 101 of 408: libseccomp2:amd64=2.6.1-1 Downloading dependency 102 of 408: dh-autoreconf:amd64=22 Downloading dependency 103 of 408: autotools-dev:amd64=20240727.1+nmu1 Downloading dependency 104 of 408: libmount1:amd64=2.42.2-2 Downloading dependency 105 of 408: libtk8.6:amd64=8.6.18-1 Downloading dependency 106 of 408: cpp-15:amd64=15.3.0-2 Downloading dependency 107 of 408: libboost-dev:amd64=1.90.0.2 Downloading dependency 108 of 408: icu-devtools:amd64=78.3-2 Downloading dependency 109 of 408: gcc-x86-64-linux-gnu:amd64=4:16.1.0-3 Downloading dependency 110 of 408: gcc-15-base:amd64=15.3.0-2 Downloading dependency 111 of 408: libproc2-1:amd64=2:4.0.6-3 Downloading dependency 112 of 408: libobjc4:amd64=16.1.0-3 Downloading dependency 113 of 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Downloading dependency 129 of 408: libncurses6:amd64=6.6+20260608-2 Downloading dependency 130 of 408: libp11-kit0:amd64=0.26.4-1 Downloading dependency 131 of 408: libtirpc-common:amd64=1.3.7+ds-1Get:1 http://deb.debian.org/debian unstable/main amd64 libtirpc-common all 1.3.7+ds-1 [10.0 kB] Fetched 10.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpen4t2glu/libtirpc-common_1.3.7+ds-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 fontconfig-config amd64 2.17.1-5 [56.1 kB] Fetched 56.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbbvv9m9c/fontconfig-config_2.17.1-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libstdc++-16-dev amd64 16.1.0-3 [2749 kB] Fetched 2749 kB in 0s (136 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpivs693eo/libstdc++-16-dev_16.1.0-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.73-2 [516 kB] Fetched 516 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpe4fgo3gx/autoconf_2.73-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260124T082420Z forky/main amd64 libevent-2.1-7t64 amd64 2.1.12-stable-10+b2 [184 kB] Fetched 184 kB in 0s (2170 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplwzkratu/libevent-2.1-7t64_2.1.12-stable-10+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libdata-optlist-perl all 0.114-1 [10.6 kB] Fetched 10.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0ckq8244/libdata-optlist-perl_0.114-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgraphite2-3 amd64 1.3.15-2 [75.8 kB] Fetched 75.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpulrpqsct/libgraphite2-3_1.3.15-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libblas3 amd64 3.12.1-8 [206 kB] Fetched 206 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkn_ece9r/libblas3_3.12.1-8_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libclang-common-21-dev amd64 1:21.1.8-10 [768 kB] Fetched 768 kB in 0s (64.4 MB/s) dpkg-name: info: moved 'libclang-common-21-dev_1%3a21.1.8-10_amd64.deb' to '/srv/rebuilderd/tmp/tmph3phsq5j/libclang-common-21-dev_21.1.8-10_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.18.1-4 [877 kB] Fetched 877 kB in 0s (71.0 MB/s) dpkg-name: info: moved 'automake_1%3a1.18.1-4_all.deb' to '/srv/rebuilderd/tmp/tmpgng2iwum/automake_1.18.1-4_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libssh2-1t64 amd64 1.11.1-5 [245 kB] Fetched 245 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphtil6hgl/libssh2-1t64_1.11.1-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgssrpc4t64 amd64 1.22.1-3 [58.3 kB] Fetched 58.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprrxe2n6z/libgssrpc4t64_1.22.1-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libp11-kit-dev amd64 0.26.4-1 [225 kB] Fetched 225 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5r_xtiti/libp11-kit-dev_0.26.4-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 llvm-21-linker-tools amd64 1:21.1.8-10 [1247 kB] Fetched 1247 kB in 0s (86.1 MB/s) dpkg-name: info: moved 'llvm-21-linker-tools_1%3a21.1.8-10_amd64.deb' to '/srv/rebuilderd/tmp/tmpyvbi1s4h/llvm-21-linker-tools_21.1.8-10_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 dctrl-tools amd64 2.24-3+b1 [104 kB] Fetched 104 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfxc677vb/dctrl-tools_2.24-3+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 gfortran amd64 4:16.1.0-3 [1436 B] Fetched 1436 B in 0s (0 B/s) dpkg-name: info: moved 'gfortran_4%3a16.1.0-3_amd64.deb' to '/srv/rebuilderd/tmp/tmp_7s4mb33/gfortran_16.1.0-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libdevel-stacktrace-perl all 2.0500-1 [26.4 kB] Fetched 26.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp79i56iqi/libdevel-stacktrace-perl_2.0500-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libmoose-perl amd64 2.4000-1+b2 [771 kB] Fetched 771 kB in 0s (68.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2zjlumxi/libmoose-perl_2.4000-1+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.15.1-1 [6020 B] Fetched 6020 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmn5a1r6p/dh-strip-nondeterminism_1.15.1-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libllvm21 amd64 1:21.1.8-10 [28.2 MB] Fetched 28.2 MB in 0s (181 MB/s) dpkg-name: info: moved 'libllvm21_1%3a21.1.8-10_amd64.deb' to '/srv/rebuilderd/tmp/tmpx2yyq12b/libllvm21_21.1.8-10_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libncurses-dev amd64 6.6+20260608-2 [356 kB] Fetched 356 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpptkmnstm/libncurses-dev_6.6+20260608-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libbrotli-dev amd64 1.2.0-3 [324 kB] Fetched 324 kB in 0s (29.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5h80s9ev/libbrotli-dev_1.2.0-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 r-cran-mime amd64 0.13-2 [47.5 kB] Fetched 47.5 kB in 0s (2980 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo4g74xe1/r-cran-mime_0.13-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 liblerc4 amd64 4.2.0+ds-1 [203 kB] Fetched 203 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpknkbm6ed/liblerc4_4.2.0+ds-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libcurl4t64 amd64 8.21.0-2 [422 kB] Fetched 422 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxreg2q8f/libcurl4t64_8.21.0-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpsl5t64 amd64 0.23.1-1 [61.0 kB] Fetched 61.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfcpeom1e/libpsl5t64_0.23.1-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libselinux1 amd64 3.11-2 [87.3 kB] Fetched 87.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo7dl2xpi/libselinux1_3.11-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libmodule-runtime-perl all 0.018-1 [17.8 kB] Fetched 17.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps77tz_sm/libmodule-runtime-perl_0.018-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 r-bioc-rhtslib amd64 3.8.0+dfsg-1 [1344 kB] Fetched 1344 kB in 1s (2069 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5bu_phw6/r-bioc-rhtslib_3.8.0+dfsg-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 build-essential amd64 12.12 [4624 B] Fetched 4624 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjg33ofh6/build-essential_12.12_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 debconf all 1.5.92 [123 kB] Fetched 123 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpftt5ni0g/debconf_1.5.92_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 cpp-15-x86-64-linux-gnu amd64 15.3.0-2 [12.2 MB] Fetched 12.2 MB in 0s (122 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8bfv2vza/cpp-15-x86-64-linux-gnu_15.3.0-2_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260124T082420Z forky/main amd64 r-cran-futile.options all 1.0.1-3 [20.0 kB] Fetched 20.0 kB in 1s (16.2 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzpo_zsvz/r-cran-futile.options_1.0.1-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libkrb5support0 amd64 1.22.1-3 [31.1 kB] Fetched 31.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptage2xsi/libkrb5support0_1.22.1-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpkgconf7 amd64 2.5.1-4 [47.8 kB] Fetched 47.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp01dgsu4h/libpkgconf7_2.5.1-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxcb1 amd64 1.17.0-2+b2 [144 kB] Fetched 144 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2nh6ex0k/libxcb1_1.17.0-2+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-6+b2 [9348 B] Fetched 9348 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc0o30owo/libkeyutils1_1.6.3-6+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 perl amd64 5.42.2-3 [265 kB] Fetched 265 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx3j_dfqm/perl_5.42.2-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 14.3 [77.3 kB] Fetched 77.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjzkfd4k6/libdebhelper-perl_14.3_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libblas-dev amd64 3.12.1-8 [219 kB] Fetched 219 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn_rrci7w/libblas-dev_3.12.1-8_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 r-bioc-iranges amd64 2.46.0-1 [2336 kB] Fetched 2336 kB in 0s (21.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplbzek9xh/r-bioc-iranges_2.46.0-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 lsb-base all 11.6 [4584 B] Fetched 4584 B in 0s (297 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphyl9vyhw/lsb-base_11.6_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 g++-16 amd64 16.1.0-3 [33.0 kB] Fetched 33.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8e1j4fcw/g++-16_16.1.0-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpam-modules amd64 1.7.0-8 [168 kB] Fetched 168 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsrt5t47c/libpam-modules_1.7.0-8_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpcre2-dev amd64 10.46-1+b2 [846 kB] Fetched 846 kB in 0s (68.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9cvqjkjg/libpcre2-dev_10.46-1+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 pkgconf amd64 2.5.1-4 [33.6 kB] Fetched 33.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4kwx1aum/pkgconf_2.5.1-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 fontconfig amd64 2.17.1-5 [191 kB] Fetched 191 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1os9owm0/fontconfig_2.17.1-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 gcc-15 amd64 15.3.0-2 [554 kB] Fetched 554 kB in 0s (47.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp_qlryi7/gcc-15_15.3.0-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libc6 amd64 2.42-17 [1790 kB] Fetched 1790 kB in 0s (109 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl5gd0dbb/libc6_2.42-17_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libcap-ng0 amd64 0.9.3-1+b1 [18.2 kB] Fetched 18.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd90_lm6v/libcap-ng0_0.9.3-1+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libtext-wrapi18n-perl all 0.06-11 [7788 B] Fetched 7788 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsk76smdd/libtext-wrapi18n-perl_0.06-11_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libacl1 amd64 2.4.0-1 [37.1 kB] Fetched 37.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsos4j183/libacl1_2.4.0-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 r-bioc-genomeinfodb all 1.48.0+dfsg-1 [3545 kB] Fetched 3545 kB in 1s (3916 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpugcfuos6/r-bioc-genomeinfodb_1.48.0+dfsg-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libffi8 amd64 3.7.1-2 [30.5 kB] Fetched 30.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo9xjhjwt/libffi8_3.7.1-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 ca-certificates all 20260601 [134 kB] Fetched 134 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3qxxm1sw/ca-certificates_20260601_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libngtcp2-crypto-ossl-dev amd64 1.24.0-1 [27.5 kB] Fetched 27.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdhwutlgj/libngtcp2-crypto-ossl-dev_1.24.0-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 gcc-16 amd64 16.1.0-3 [523 kB] Fetched 523 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpekg_9uqu/gcc-16_16.1.0-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libreadline-dev amd64 8.3-4 [163 kB] Fetched 163 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsid95x0b/libreadline-dev_8.3-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libwebp7 amd64 1.5.0-0.1+b2 [335 kB] Fetched 335 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8ejlfucv/libwebp7_1.5.0-0.1+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgmp-dev amd64 2:6.3.0+dfsg-5+b2 [641 kB] Fetched 641 kB in 0s (56.5 MB/s) dpkg-name: info: moved 'libgmp-dev_2%3a6.3.0+dfsg-5+b2_amd64.deb' to '/srv/rebuilderd/tmp/tmpesezt571/libgmp-dev_6.3.0+dfsg-5+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libngtcp2-dev amd64 1.24.0-1 [204 kB] Fetched 204 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgtzn46ef/libngtcp2-dev_1.24.0-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libnettle8t64 amd64 3.10.2-1+b1 [305 kB] Fetched 305 kB in 0s (28.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx2u3kyxy/libnettle8t64_3.10.2-1+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxcb-shm0 amd64 1.17.0-2+b2 [105 kB] Fetched 105 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvq9xl5tr/libxcb-shm0_1.17.0-2+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libparams-classify-perl amd64 0.015-2+b6 [22.5 kB] Fetched 22.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpods0l7li/libparams-classify-perl_0.015-2+b6_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libisl23 amd64 0.28-1 [667 kB] Fetched 667 kB in 0s (61.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp28rfoz0a/libisl23_0.28-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 r-cran-askpass amd64 1.2.1-3 [24.5 kB] Fetched 24.5 kB in 0s (1469 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpf4rtvxtl/r-cran-askpass_1.2.1-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 clang-21 amd64 1:21.1.8-10 [139 kB] Fetched 139 kB in 0s (0 B/s) dpkg-name: info: moved 'clang-21_1%3a21.1.8-10_amd64.deb' to '/srv/rebuilderd/tmp/tmp0txannu1/clang-21_21.1.8-10_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libcc1-0 amd64 16.1.0-3 [46.0 kB] Fetched 46.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd29uufy7/libcc1-0_16.1.0-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 fonts-freefont-ttf all 20211204+svn4273-4 [5318 kB] Fetched 5318 kB in 1s (7880 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4wsoswpz/fonts-freefont-ttf_20211204+svn4273-4_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 gcc-16-x86-64-linux-gnu amd64 16.1.0-3 [87.1 MB] Fetched 87.1 MB in 1s (159 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9ee1ter8/gcc-16-x86-64-linux-gnu_16.1.0-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxft2 amd64 2.3.6-1+b5 [54.8 kB] Fetched 54.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc7ya57qq/libxft2_2.3.6-1+b5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 base-passwd amd64 3.6.8 [54.6 kB] Fetched 54.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_jwwtjdq/base-passwd_3.6.8_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpsl-dev amd64 0.23.1-1 [30.0 kB] Fetched 30.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyok7380i/libpsl-dev_0.23.1-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libbz2-1.0 amd64 1.0.8-6+b2 [39.9 kB] Fetched 39.9 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkqm3u4is/libbz2-1.0_1.0.8-6+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgcc-s1 amd64 16.1.0-3 [74.1 kB] Fetched 74.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyqt6m812/libgcc-s1_16.1.0-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 r-bioc-s4vectors amd64 0.50.1+dfsg-1 [1849 kB] Fetched 1849 kB in 0s (8928 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplq086syn/r-bioc-s4vectors_0.50.1+dfsg-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxrender1 amd64 1:0.9.12-1+b2 [27.7 kB] Fetched 27.7 kB in 0s (0 B/s) dpkg-name: info: moved 'libxrender1_1%3a0.9.12-1+b2_amd64.deb' to '/srv/rebuilderd/tmp/tmp81cwsef2/libxrender1_0.9.12-1+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libb-hooks-op-check-perl amd64 0.22-3+b5 [10.6 kB] Fetched 10.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgh26uf33/libb-hooks-op-check-perl_0.22-3+b5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libfontconfig1 amd64 2.17.1-5 [132 kB] Fetched 132 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppibk_7ff/libfontconfig1_2.17.1-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgnutls28-dev amd64 3.8.13-1 [1479 kB] Fetched 1479 kB in 0s (96.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprzhcvffq/libgnutls28-dev_3.8.13-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 r-cran-bh all 1.90.0-1 [6220 B] Fetched 6220 B in 0s (309 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppewri713/r-cran-bh_1.90.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libthai0 amd64 0.1.30-3 [51.7 kB] Fetched 51.7 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpltipc3zn/libthai0_0.1.30-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libfile-which-perl all 1.27-2 [15.1 kB] Fetched 15.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8q7jmm9d/libfile-which-perl_1.27-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 openssl amd64 3.6.3-1 [1522 kB] Fetched 1522 kB in 0s (101 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgjciwld1/openssl_3.6.3-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libquadmath0 amd64 16.1.0-3 [148 kB] Fetched 148 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpovfrm5py/libquadmath0_16.1.0-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libdatrie1 amd64 0.2.14-2 [39.1 kB] Fetched 39.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2a5wzv8j/libdatrie1_0.2.14-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgnutls30t64 amd64 3.8.13-1 [1546 kB] Fetched 1546 kB in 0s (103 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3tryb_xf/libgnutls30t64_3.8.13-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 ncurses-bin amd64 6.6+20260608-2 [445 kB] Fetched 445 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz_97aejz/ncurses-bin_6.6+20260608-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libkdb5-10t64 amd64 1.22.1-3 [41.3 kB] Fetched 41.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpunyyyn_w/libkdb5-10t64_1.22.1-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Fetched 22.9 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_wh67_c0/intltool-debian_0.35.0+20060710.6_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 util-linux amd64 2.42.2-2 [1230 kB] Fetched 1230 kB in 0s (86.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6gbisq6n/util-linux_2.42.2-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libc-dev-bin amd64 2.42-17 [38.1 kB] Fetched 38.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp04onlne8/libc-dev-bin_2.42-17_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libdeflate-dev amd64 1.25-1 [56.7 kB] Fetched 56.7 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdl64kxy2/libdeflate-dev_1.25-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libhogweed6t64 amd64 3.10.2-1+b1 [335 kB] Fetched 335 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpldzrmc6a/libhogweed6t64_3.10.2-1+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libclass-load-xs-perl amd64 0.10-2+b5 [14.2 kB] Fetched 14.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo1zvmc36/libclass-load-xs-perl_0.10-2+b5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 binutils-x86-64-linux-gnu amd64 2.47-2 [1072 kB] Fetched 1072 kB in 0s (86.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnk5tlubt/binutils-x86-64-linux-gnu_2.47-2_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260124T082420Z forky/main amd64 fonts-texgyre all 20180621-7 [8210 kB] Fetched 8210 kB in 0s (30.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcrwstckx/fonts-texgyre_20180621-7_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 liblsan0 amd64 16.1.0-3 [1280 kB] Fetched 1280 kB in 0s (95.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpg5h3xgxg/liblsan0_16.1.0-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxml2-16 amd64 2.15.3+dfsg-1 [642 kB] Fetched 642 kB in 0s (60.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphac0jnh8/libxml2-16_2.15.3+dfsg-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 comerr-dev amd64 2.1-1.47.4-1 [50.9 kB] Fetched 50.9 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy5smpi0a/comerr-dev_2.1-1.47.4-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libstdc++6 amd64 16.1.0-3 [822 kB] Fetched 822 kB in 0s (72.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4tukqt5y/libstdc++6_16.1.0-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 g++-16-x86-64-linux-gnu amd64 16.1.0-3 [81.9 MB] Fetched 81.9 MB in 1s (154 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcdes0871/g++-16-x86-64-linux-gnu_16.1.0-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libnamespace-clean-perl all 0.27-2 [17.8 kB] Fetched 17.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwlmoyqjd/libnamespace-clean-perl_0.27-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libnghttp2-dev amd64 1.70.0-1 [131 kB] Fetched 131 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx1pqezxc/libnghttp2-dev_1.70.0-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libblkid1 amd64 2.42.2-2 [173 kB] Fetched 173 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprlfe4v7p/libblkid1_2.42.2-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 r-bioc-biocgenerics all 0.58.1-1 [649 kB] Fetched 649 kB in 0s (3996 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgbvnaudw/r-bioc-biocgenerics_0.58.1-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 fonts-croscore all 20201225-6 [1560 kB] Fetched 1560 kB in 0s (7158 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0fqag_s6/fonts-croscore_20201225-6_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 librtmp1 amd64 2.6-1 [60.3 kB] Fetched 60.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxjrrnt8v/librtmp1_2.6-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libboost1.90-dev amd64 1.90.0-6 [11.3 MB] Fetched 11.3 MB in 0s (182 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5xm72w3e/libboost1.90-dev_1.90.0-6_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libsub-identify-perl amd64 0.14-4+b1 [11.3 kB] Fetched 11.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6llsmd43/libsub-identify-perl_0.14-4+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.42.2-2 [99.8 kB] Fetched 99.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxam_tj6w/bsdextrautils_2.42.2-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libc6-dev amd64 2.42-17 [1991 kB] Fetched 1991 kB in 0s (119 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_mq2z8j2/libc6-dev_2.42-17_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 liblzma5 amd64 5.8.3-1 [332 kB] Fetched 332 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3pkfim0m/liblzma5_5.8.3-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpango-1.0-0 amd64 1.58.0-1 [225 kB] Fetched 225 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptfov_qwm/libpango-1.0-0_1.58.0-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libudev1 amd64 261.2-1 [140 kB] Fetched 140 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdhq6ezbw/libudev1_261.2-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 r-bioc-xvector amd64 0.52.0-1 [629 kB] Fetched 629 kB in 0s (18.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4sjykvka/r-bioc-xvector_0.52.0-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libhwasan0 amd64 16.1.0-3 [1580 kB] Fetched 1580 kB in 0s (106 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxgm6sjcn/libhwasan0_16.1.0-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libdebconfclient0 amd64 0.283 [7572 B] Fetched 7572 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcqnejdcb/libdebconfclient0_0.283_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgcc-15-dev amd64 15.3.0-2 [2717 kB] Fetched 2717 kB in 0s (134 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsaxlt199/libgcc-15-dev_15.3.0-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.47-4 [111 kB] Fetched 111 kB in 0s (0 B/s) dpkg-name: info: moved 'libmagic1t64_1%3a5.47-4_amd64.deb' to '/srv/rebuilderd/tmp/tmpacrrcisz/libmagic1t64_5.47-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.195-1 [58.1 kB] Fetched 58.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqjfm8tpm/libelf1t64_0.195-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libidn2-dev amd64 2.3.8-5 [102 kB] Fetched 102 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd48tkobm/libidn2-dev_2.3.8-5_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpcre2-32-0 amd64 10.46-1+b2 [267 kB] Fetched 267 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc3mxkxae/libpcre2-32-0_10.46-1+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libjpeg62-turbo-dev amd64 1:3.1.3-4 [356 kB] Fetched 356 kB in 0s (0 B/s) dpkg-name: info: moved 'libjpeg62-turbo-dev_1%3a3.1.3-4_amd64.deb' to '/srv/rebuilderd/tmp/tmpoih20t_z/libjpeg62-turbo-dev_3.1.3-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 ucf all 3.0056 [47.1 kB] Fetched 47.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgqu5_ju1/ucf_3.0056_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 hostname amd64 3.25 [11.0 kB] Fetched 11.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4w62kb4n/hostname_3.25_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libc-gconv-modules-extra amd64 2.42-17 [1097 kB] Fetched 1097 kB in 0s (87.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgwxw2u_f/libc-gconv-modules-extra_2.42-17_amd64.deb' Downloading dependency 132 of 408: fontconfig-config:amd64=2.17.1-5 Downloading dependency 133 of 408: libstdc++-16-dev:amd64=16.1.0-3 Downloading dependency 134 of 408: autoconf:amd64=2.73-2 Downloading dependency 135 of 408: libevent-2.1-7t64:amd64=2.1.12-stable-10+b2 Downloading dependency 136 of 408: libdata-optlist-perl:amd64=0.114-1 Downloading dependency 137 of 408: libgraphite2-3:amd64=1.3.15-2 Downloading dependency 138 of 408: libblas3:amd64=3.12.1-8 Downloading dependency 139 of 408: libclang-common-21-dev:amd64=1:21.1.8-10 Downloading dependency 140 of 408: automake:amd64=1:1.18.1-4 Downloading dependency 141 of 408: libssh2-1t64:amd64=1.11.1-5 Downloading dependency 142 of 408: libgssrpc4t64:amd64=1.22.1-3 Downloading dependency 143 of 408: libp11-kit-dev:amd64=0.26.4-1 Downloading dependency 144 of 408: llvm-21-linker-tools:amd64=1:21.1.8-10 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libngtcp2-dev:amd64=1.24.0-1 Downloading dependency 192 of 408: libnettle8t64:amd64=3.10.2-1+b1 Downloading dependency 193 of 408: libxcb-shm0:amd64=1.17.0-2+b2 Downloading dependency 194 of 408: libparams-classify-perl:amd64=0.015-2+b6 Downloading dependency 195 of 408: libisl23:amd64=0.28-1 Downloading dependency 196 of 408: r-cran-askpass:amd64=1.2.1-3 Downloading dependency 197 of 408: clang-21:amd64=1:21.1.8-10 Downloading dependency 198 of 408: libcc1-0:amd64=16.1.0-3 Downloading dependency 199 of 408: fonts-freefont-ttf:amd64=20211204+svn4273-4 Downloading dependency 200 of 408: gcc-16-x86-64-linux-gnu:amd64=16.1.0-3 Downloading dependency 201 of 408: libxft2:amd64=2.3.6-1+b5 Downloading dependency 202 of 408: base-passwd:amd64=3.6.8 Downloading dependency 203 of 408: libpsl-dev:amd64=0.23.1-1 Downloading dependency 204 of 408: libbz2-1.0:amd64=1.0.8-6+b2 Downloading dependency 205 of 408: libgcc-s1:amd64=16.1.0-3 Downloading dependency 206 of 408: r-bioc-s4vectors:amd64=0.50.1+dfsg-1 Downloading dependency 207 of 408: libxrender1:amd64=1:0.9.12-1+b2 Downloading dependency 208 of 408: libb-hooks-op-check-perl:amd64=0.22-3+b5 Downloading dependency 209 of 408: libfontconfig1:amd64=2.17.1-5 Downloading dependency 210 of 408: libgnutls28-dev:amd64=3.8.13-1 Downloading dependency 211 of 408: r-cran-bh:amd64=1.90.0-1 Downloading dependency 212 of 408: libthai0:amd64=0.1.30-3 Downloading dependency 213 of 408: libfile-which-perl:amd64=1.27-2 Downloading dependency 214 of 408: openssl:amd64=3.6.3-1 Downloading dependency 215 of 408: libquadmath0:amd64=16.1.0-3 Downloading dependency 216 of 408: libdatrie1:amd64=0.2.14-2 Downloading dependency 217 of 408: libgnutls30t64:amd64=3.8.13-1 Downloading dependency 218 of 408: ncurses-bin:amd64=6.6+20260608-2 Downloading dependency 219 of 408: libkdb5-10t64:amd64=1.22.1-3 Downloading dependency 220 of 408: intltool-debian:amd64=0.35.0+20060710.6 Downloading dependency 221 of 408: 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r-bioc-biocgenerics:amd64=0.58.1-1 Downloading dependency 237 of 408: fonts-croscore:amd64=20201225-6 Downloading dependency 238 of 408: librtmp1:amd64=2.6-1 Downloading dependency 239 of 408: libboost1.90-dev:amd64=1.90.0-6 Downloading dependency 240 of 408: libsub-identify-perl:amd64=0.14-4+b1 Downloading dependency 241 of 408: bsdextrautils:amd64=2.42.2-2 Downloading dependency 242 of 408: libc6-dev:amd64=2.42-17 Downloading dependency 243 of 408: liblzma5:amd64=5.8.3-1 Downloading dependency 244 of 408: libpango-1.0-0:amd64=1.58.0-1 Downloading dependency 245 of 408: libudev1:amd64=261.2-1 Downloading dependency 246 of 408: r-bioc-xvector:amd64=0.52.0-1 Downloading dependency 247 of 408: libhwasan0:amd64=16.1.0-3 Downloading dependency 248 of 408: libdebconfclient0:amd64=0.283 Downloading dependency 249 of 408: libgcc-15-dev:amd64=15.3.0-2 Downloading dependency 250 of 408: libmagic1t64:amd64=1:5.47-4 Downloading dependency 251 of 408: libelf1t64:amd64=0.195-1 Downloading dependency 252 of 408: libidn2-dev:amd64=2.3.8-5 Downloading dependency 253 of 408: libpcre2-32-0:amd64=10.46-1+b2 Downloading dependency 254 of 408: libjpeg62-turbo-dev:amd64=1:3.1.3-4 Downloading dependency 255 of 408: ucf:amd64=3.0056 Downloading dependency 256 of 408: hostname:amd64=3.25 Downloading dependency 257 of 408: libc-gconv-modules-extra:amd64=2.42-17 Downloading dependency 258 of 408: libunistring5:amd64=1.4.2-1Get:1 http://deb.debian.org/debian unstable/main amd64 libunistring5 amd64 1.4.2-1 [480 kB] Fetched 480 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5rjc0b_1/libunistring5_1.4.2-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 gawk amd64 1:5.3.2-1 [772 kB] Fetched 772 kB in 0s (6461 kB/s) dpkg-name: info: moved 'gawk_1%3a5.3.2-1_amd64.deb' to '/srv/rebuilderd/tmp/tmpdi48ugdu/gawk_5.3.2-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpam-runtime all 1.7.0-8 [246 kB] Fetched 246 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6ak3zas5/libpam-runtime_1.7.0-8_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libicu-dev amd64 78.3-2 [11.1 MB] Fetched 11.1 MB in 0s (183 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8hnmv7m5/libicu-dev_78.3-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.1-1 [1469 kB] Fetched 1469 kB in 0s (101 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpte9qgwz9/man-db_2.13.1-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libcrypt1 amd64 1:4.5.1-1+b1 [96.4 kB] Fetched 96.4 kB in 0s (0 B/s) dpkg-name: info: moved 'libcrypt1_1%3a4.5.1-1+b1_amd64.deb' to '/srv/rebuilderd/tmp/tmp0qq7h5ox/libcrypt1_4.5.1-1+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libjpeg62-turbo amd64 1:3.1.3-4 [213 kB] Fetched 213 kB in 0s (0 B/s) dpkg-name: info: moved 'libjpeg62-turbo_1%3a3.1.3-4_amd64.deb' to '/srv/rebuilderd/tmp/tmp0byund6d/libjpeg62-turbo_3.1.3-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 dpkg-dev all 1.23.7 [1318 kB] Fetched 1318 kB in 0s (94.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpba8rgy59/dpkg-dev_1.23.7_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libmodule-implementation-perl all 0.09-2 [12.6 kB] Fetched 12.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpe2jioua3/libmodule-implementation-perl_0.09-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libmpfr6 amd64 4.2.2-3 [729 kB] Fetched 729 kB in 0s (66.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgd49672b/libmpfr6_4.2.2-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libdevel-callchecker-perl amd64 0.009-3+b1 [15.7 kB] Fetched 15.7 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4x6k0rcl/libdevel-callchecker-perl_0.009-3+b1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260617T203449Z forky/main amd64 libunbound8 amd64 1.25.1-1 [619 kB] Fetched 619 kB in 0s (15.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0yn41yoc/libunbound8_1.25.1-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libvariable-magic-perl amd64 0.64-1+b2 [45.1 kB] Fetched 45.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4afvkr5e/libvariable-magic-perl_0.64-1+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libsub-install-perl all 0.929-1 [10.5 kB] Fetched 10.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjlwi09oi/libsub-install-perl_0.929-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxcb-render0 amd64 1.17.0-2+b2 [115 kB] Fetched 115 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv6s60_k8/libxcb-render0_1.17.0-2+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libparams-util-perl amd64 1.102-3+b2 [24.7 kB] Fetched 24.7 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo1blze66/libparams-util-perl_1.102-3+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libcairo2 amd64 1.18.4-3+b1 [543 kB] Fetched 543 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqcqpz3a6/libcairo2_1.18.4-3+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libclang1-21 amd64 1:21.1.8-10 [7701 kB] Fetched 7701 kB in 0s (176 MB/s) dpkg-name: info: moved 'libclang1-21_1%3a21.1.8-10_amd64.deb' to '/srv/rebuilderd/tmp/tmpy0c79n_l/libclang1-21_21.1.8-10_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgomp1 amd64 16.1.0-3 [151 kB] Fetched 151 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzka2jxwq/libgomp1_16.1.0-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libz3-4 amd64 4.13.3-1.1 [8644 kB] Fetched 8644 kB in 0s (127 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp40qyjsg6/libz3-4_4.13.3-1.1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libconfig-properties-perl all 1.80-3 [18.3 kB] Fetched 18.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpke1c_e20/libconfig-properties-perl_1.80-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libmro-compat-perl all 0.15-2 [11.8 kB] Fetched 11.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7aqjy1jj/libmro-compat-perl_0.15-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libnghttp3-dev amd64 1.17.0-1 [96.3 kB] Fetched 96.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjez7u2iz/libnghttp3-dev_1.17.0-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libzstd1 amd64 1.5.7+dfsg-4 [304 kB] Fetched 304 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps1lanl27/libzstd1_1.5.7+dfsg-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.24.1-1 [1336 kB] Fetched 1336 kB in 0s (95.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphy7d6vfs/groff-base_1.24.1-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 perl-base amd64 5.42.2-3 [1852 kB] Fetched 1852 kB in 0s (113 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9lowf4py/perl-base_5.42.2-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 debianutils amd64 5.23.2 [92.4 kB] Fetched 92.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5ffuommz/debianutils_5.23.2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libfontenc1 amd64 1:1.1.8-1+b3 [23.4 kB] Fetched 23.4 kB in 0s (0 B/s) dpkg-name: info: moved 'libfontenc1_1%3a1.1.8-1+b3_amd64.deb' to '/srv/rebuilderd/tmp/tmp2_do3817/libfontenc1_1.1.8-1+b3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.15.1-1 [17.1 kB] Fetched 17.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnvenoj1x/libfile-stripnondeterminism-perl_1.15.1-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libscalar-list-utils-perl amd64 1:1.70-1+b1 [64.8 kB] Fetched 64.8 kB in 0s (781 kB/s) dpkg-name: info: moved 'libscalar-list-utils-perl_1%3a1.70-1+b1_amd64.deb' to '/srv/rebuilderd/tmp/tmpt4j2fm9e/libscalar-list-utils-perl_1.70-1+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Fetched 104 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9j5l2pin/libarchive-zip-perl_1.68-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libk5crypto3 amd64 1.22.1-3 [79.0 kB] Fetched 79.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkvhr2osw/libk5crypto3_1.22.1-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libhttp-message-perl all 7.04-1 [80.6 kB] Fetched 80.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpum84qexa/libhttp-message-perl_7.04-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Fetched 20.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8tlszle0/liblwp-mediatypes-perl_6.04-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 r-bioc-biostrings amd64 2.80.1+dfsg-1 [13.3 MB] Fetched 13.3 MB in 0s (44.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmc3sm9pj/r-bioc-biostrings_2.80.1+dfsg-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libclone-perl amd64 0.50-1+b1 [21.7 kB] Fetched 21.7 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd8jeq6ps/libclone-perl_0.50-1+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-11 [17.2 kB] Fetched 17.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpg6nk4wx4/libsasl2-modules-db_2.1.28+dfsg1-11_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260617T203449Z forky/main amd64 r-cran-sys amd64 3.4.3-2 [44.4 kB] Fetched 44.4 kB in 0s (535 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3yz__0gh/r-cran-sys_3.4.3-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libfribidi0 amd64 1.0.16-5+b1 [26.2 kB] Fetched 26.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7t4bzs6w/libfribidi0_1.0.16-5+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 liblzma-dev amd64 5.8.3-1 [369 kB] Fetched 369 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcst93ehz/liblzma-dev_5.8.3-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libbsd0 amd64 0.12.2-3 [132 kB] Fetched 132 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn4w8n9yz/libbsd0_0.12.2-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 g++-x86-64-linux-gnu amd64 4:16.1.0-3 [1196 B] Fetched 1196 B in 0s (0 B/s) dpkg-name: info: moved 'g++-x86-64-linux-gnu_4%3a16.1.0-3_amd64.deb' to '/srv/rebuilderd/tmp/tmp18g7icsw/g++-x86-64-linux-gnu_16.1.0-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 cpp-x86-64-linux-gnu amd64 4:16.1.0-3 [4472 B] Fetched 4472 B in 0s (0 B/s) dpkg-name: info: moved 'cpp-x86-64-linux-gnu_4%3a16.1.0-3_amd64.deb' to '/srv/rebuilderd/tmp/tmpi6sqrg_z/cpp-x86-64-linux-gnu_16.1.0-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 nettle-dev amd64 3.10.2-1+b1 [1321 kB] Fetched 1321 kB in 0s (92.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd7fsgxsq/nettle-dev_3.10.2-1+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 krb5-multidev amd64 1.22.1-3 [125 kB] Fetched 125 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1koo6ajs/krb5-multidev_1.22.1-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 binutils-common amd64 2.47-2 [2685 kB] Fetched 2685 kB in 0s (133 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkhiglvyg/binutils-common_2.47-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 mawk amd64 1.3.4.20260302-1 [142 kB] Fetched 142 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxs9cyx9t/mawk_1.3.4.20260302-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpackage-deprecationmanager-perl all 0.18-1 [17.6 kB] Fetched 17.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdrsphmoy/libpackage-deprecationmanager-perl_0.18-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libmd0 amd64 1.2.0-2 [43.2 kB] Fetched 43.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl4hitxjr/libmd0_1.2.0-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libtirpc-dev amd64 1.3.7+ds-1 [190 kB] Fetched 190 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0_eandq3/libtirpc-dev_1.3.7+ds-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 init-system-helpers all 1.69 [39.3 kB] Fetched 39.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpf7qum79n/init-system-helpers_1.69_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 cpp amd64 4:16.1.0-3 [1568 B] Fetched 1568 B in 0s (0 B/s) dpkg-name: info: moved 'cpp_4%3a16.1.0-3_amd64.deb' to '/srv/rebuilderd/tmp/tmpmf16bpr3/cpp_16.1.0-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 autopoint all 1.0-3 [820 kB] Fetched 820 kB in 0s (73.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr1hsbytt/autopoint_1.0-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-2+b2 [69.0 kB] Fetched 69.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_pevq0w6/libuchardet0_0.0.8-2+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.47-4 [345 kB] Fetched 345 kB in 0s (0 B/s) dpkg-name: info: moved 'libmagic-mgc_1%3a5.47-4_amd64.deb' to '/srv/rebuilderd/tmp/tmp4zxcz_h4/libmagic-mgc_5.47-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 cpp-16-x86-64-linux-gnu amd64 16.1.0-3 [76.0 MB] Fetched 76.0 MB in 0s (173 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxgg4118p/cpp-16-x86-64-linux-gnu_16.1.0-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 xfonts-encodings all 1:1.0.4-2.2 [577 kB] Fetched 577 kB in 0s (56.7 MB/s) dpkg-name: info: moved 'xfonts-encodings_1%3a1.0.4-2.2_all.deb' to '/srv/rebuilderd/tmp/tmp36ab7iou/xfonts-encodings_1.0.4-2.2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libsframe3 amd64 2.47-2 [84.8 kB] Fetched 84.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu_l3ysy1/libsframe3_2.47-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 r-bioc-seqinfo all 1.2.0+dfsg-1 [390 kB] Fetched 390 kB in 0s (7151 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp___e5e5x/r-bioc-seqinfo_1.2.0+dfsg-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 xdg-utils all 1.2.1-2 [75.8 kB] Fetched 75.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8uj5i4nc/xdg-utils_1.2.1-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libclass-c3-perl all 0.35-2 [21.0 kB] Fetched 21.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpico3ls6s/libclass-c3-perl_0.35-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 gfortran-16 amd64 16.1.0-3 [15.3 kB] Fetched 15.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyhrj03cf/gfortran-16_16.1.0-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpackage-stash-perl all 0.40-1 [22.0 kB] Fetched 22.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb8iimmcx/libpackage-stash-perl_0.40-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libstdc++-15-dev amd64 15.3.0-2 [2784 kB] Fetched 2784 kB in 0s (135 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6qj8_015/libstdc++-15-dev_15.3.0-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 r-cran-generics all 0.1.4-1 [84.2 kB] Fetched 84.2 kB in 0s (7142 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5wr8uycl/r-cran-generics_0.1.4-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libwww-curl-simple-perl all 0.100191-3 [12.6 kB] Fetched 12.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp43le27zm/libwww-curl-simple-perl_0.100191-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libtinfo6 amd64 6.6+20260608-2 [353 kB] Fetched 353 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwevn12o5/libtinfo6_6.6+20260608-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-mono all 2.37-9 [488 kB] Fetched 488 kB in 0s (45.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfmu1gouf/fonts-dejavu-mono_2.37-9_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libngtcp2-crypto-gnutls8 amd64 1.24.0-1 [23.9 kB] Fetched 23.9 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1dr_kagr/libngtcp2-crypto-gnutls8_1.24.0-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libngtcp2-16 amd64 1.24.0-1 [145 kB] Fetched 145 kB in 0s (12.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3h_pdcun/libngtcp2-16_1.24.0-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 r-cran-codetools all 0.2-20-1 [91.1 kB] Fetched 91.1 kB in 0s (1338 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj9nlwtr3/r-cran-codetools_0.2-20-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260124T082420Z forky/main amd64 libopenblas-pthread-dev amd64 0.3.30+ds-3 [5500 kB] Fetched 5500 kB in 1s (7438 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv0d8250l/libopenblas-pthread-dev_0.3.30+ds-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 coreutils amd64 9.10-1 [3142 kB] Fetched 3142 kB in 0s (129 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsv_0bje7/coreutils_9.10-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpangocairo-1.0-0 amd64 1.58.0-1 [34.2 kB] Fetched 34.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp75kq58gg/libpangocairo-1.0-0_1.58.0-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 gcc-15-x86-64-linux-gnu amd64 15.3.0-2 [23.6 MB] Fetched 23.6 MB in 0s (176 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjq5cp153/gcc-15-x86-64-linux-gnu_15.3.0-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 cpp-16 amd64 16.1.0-3 [1272 B] Fetched 1272 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpk_5l6kk0/cpp-16_16.1.0-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 dash amd64 0.5.12-12 [98.5 kB] Fetched 98.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprukbjwg5/dash_0.5.12-12_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-3 [49.2 kB] Fetched 49.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl0_x8y95/libpipeline1_1.5.8-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libdb5.3t64 amd64 5.3.28+dfsg2-11+b1 [709 kB] Fetched 709 kB in 0s (55.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4cnhacx_/libdb5.3t64_5.3.28+dfsg2-11+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 sysvinit-utils amd64 3.18-1 [29.7 kB] Fetched 29.7 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbny_rxh6/sysvinit-utils_3.18-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpackage-stash-xs-perl amd64 0.30-1+b6 [20.8 kB] Fetched 20.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5uw15bti/libpackage-stash-xs-perl_0.30-1+b6_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 xfonts-utils amd64 1:7.7+7 [93.3 kB] Fetched 93.3 kB in 0s (0 B/s) dpkg-name: info: moved 'xfonts-utils_1%3a7.7+7_amd64.deb' to '/srv/rebuilderd/tmp/tmpm83xbijt/xfonts-utils_7.7+7_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libsub-name-perl amd64 0.28-1+b3 [12.6 kB] Fetched 12.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbbzvmiiy/libsub-name-perl_0.28-1+b3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 base-files amd64 14.2 [88.0 kB] Fetched 88.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkfdhz_9t/base-files_14.2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 procps amd64 2:4.0.6-3 [983 kB] Fetched 983 kB in 0s (82.4 MB/s) dpkg-name: info: moved 'procps_2%3a4.0.6-3_amd64.deb' to '/srv/rebuilderd/tmp/tmp3dfy49ep/procps_4.0.6-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libdevel-overloadinfo-perl all 0.008-1 [7748 B] Fetched 7748 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps0gwz6pr/libdevel-overloadinfo-perl_0.008-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 rpcsvc-proto amd64 1.4.4-1 [63.4 kB] Fetched 63.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkg8_ubt5/rpcsvc-proto_1.4.4-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 perl-modules-5.42 all 5.42.2-3 [3210 kB] Fetched 3210 kB in 0s (140 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp10w9bk6y/perl-modules-5.42_5.42.2-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libbrotli1 amd64 1.2.0-3 [320 kB] Fetched 320 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxthr84y4/libbrotli1_1.2.0-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 linux-libc-dev all 7.1.6-1 [2038 kB] Fetched 2038 kB in 0s (10.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnr34eju4/linux-libc-dev_7.1.6-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 unzip amd64 6.0-30 [173 kB] Fetched 173 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2xaful7_/unzip_6.0-30_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpam-modules-bin amd64 1.7.0-8 [46.3 kB] Fetched 46.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpg8c1ox36/libpam-modules-bin_1.7.0-8_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libnghttp2-14 amd64 1.70.0-1 [92.7 kB] Fetched 92.7 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3q5ut3_d/libnghttp2-14_1.70.0-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpaper2 amd64 2.2.5-0.4 [16.6 kB] Fetched 16.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc61ho69d/libpaper2_2.2.5-0.4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libtsan2 amd64 16.1.0-3 [2573 kB] Fetched 2573 kB in 0s (130 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqrp1w_hy/libtsan2_16.1.0-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libsharpyuv0 amd64 1.5.0-0.1+b2 [115 kB] Fetched 115 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpa_w2wdh5/libsharpyuv0_1.5.0-0.1+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpng16-16t64 amd64 1.6.58-1 [289 kB] Fetched 289 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprdbxplf5/libpng16-16t64_1.6.58-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libncursesw6 amd64 6.6+20260608-2 [137 kB] Fetched 137 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0n6ejhqh/libncursesw6_6.6+20260608-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 dh-r all 20260707 [40.6 kB] Fetched 40.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkxiaf6x7/dh-r_20260707_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libdist-checkconflicts-perl all 0.11-2 [10.5 kB] Fetched 10.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0v7z6yhc/libdist-checkconflicts-perl_0.11-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 r-cran-jsonlite amd64 2.0.0+dfsg-2 [447 kB] Fetched 447 kB in 0s (5484 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvnk4qsik/r-cran-jsonlite_2.0.0+dfsg-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libkrb5-3 amd64 1.22.1-3 [335 kB] Fetched 335 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxkemt07q/libkrb5-3_1.22.1-3_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260124T082420Z forky/main amd64 r-cran-formatr all 1.14-2 [152 kB] Fetched 152 kB in 2s (90.2 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc4_p4cws/r-cran-formatr_1.14-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libcurl4-gnutls amd64 8.21.0-2 [416 kB] Fetched 416 kB in 0s (38.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpivcr2ye3/libcurl4-gnutls_8.21.0-2_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260617T203449Z forky/main amd64 libc-bin amd64 2.42-16 [622 kB] Fetched 622 kB in 0s (4917 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxsrqek0b/libc-bin_2.42-16_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260124T082420Z forky/main amd64 r-cran-lambda.r all 1.2.4-2 [118 kB] Fetched 118 kB in 2s (78.3 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2xwyvwhg/r-cran-lambda.r_1.2.4-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 gfortran-16-x86-64-linux-gnu amd64 16.1.0-3 [78.6 MB] Fetched 78.6 MB in 1s (127 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpybhp44dk/gfortran-16-x86-64-linux-gnu_16.1.0-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpcre2-16-0 amd64 10.46-1+b2 [280 kB] Fetched 280 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpk357t03n/libpcre2-16-0_10.46-1+b2_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260617T203449Z forky/main amd64 r-cran-bitops amd64 1.0-9-3 [30.6 kB] Fetched 30.6 kB in 1s (32.2 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpg851xv_9/r-cran-bitops_1.0-9-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 readline-common all 8.3-4 [74.8 kB] Fetched 74.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv3ymldwd/readline-common_8.3-4_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libtool all 2.5.4-11 [539 kB] Fetched 539 kB in 0s (50.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp40qzcbe7/libtool_2.5.4-11_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libldap2 amd64 2.6.13+dfsg-1+b1 [189 kB] Fetched 189 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcfqsif6b/libldap2_2.6.13+dfsg-1+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libcurl4-openssl-dev amd64 8.21.0-2 [550 kB] Fetched 550 kB in 0s (50.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6q402ihb/libcurl4-openssl-dev_8.21.0-2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 fonts-freefont-otf all 20211204+svn4273-4 [4322 kB] Fetched 4322 kB in 0s (22.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt3g0aod0/fonts-freefont-otf_20211204+svn4273-4_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libtcl8.6 amd64 8.6.18+dfsg-1 [1053 kB] Fetched 1053 kB in 0s (85.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx8i9qx33/libtcl8.6_8.6.18+dfsg-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 dpkg amd64 1.23.7 [1531 kB] Fetched 1531 kB in 0s (103 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwwgx3b3h/dpkg_1.23.7_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260617T203449Z forky/main amd64 findutils amd64 4.10.0-4 [700 kB] Fetched 700 kB in 0s (12.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnb5weq37/findutils_4.10.0-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.17-1 [109 kB] Fetched 109 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0n091zsy/dwz_0.17-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libldap-dev amd64 2.6.13+dfsg-1+b1 [308 kB] Fetched 308 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp649m1fwz/libldap-dev_2.6.13+dfsg-1+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpam0g amd64 1.7.0-8 [66.9 kB] Fetched 66.9 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvfwsf3yw/libpam0g_1.7.0-8_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 pkgconf-bin amd64 2.5.1-4 [35.9 kB] Fetched 35.9 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7f3sb3ys/pkgconf-bin_2.5.1-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libjbig0 amd64 2.1-6.1+b3 [32.2 kB] Fetched 32.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprst7kt0q/libjbig0_2.1-6.1+b3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libtimedate-perl all 2.3500-1 [64.2 kB] Fetched 64.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4fi4w1vb/libtimedate-perl_2.3500-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 grep amd64 3.12-1 [443 kB] Fetched 443 kB in 0s (42.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0t5algb_/grep_3.12-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxt6t64 amd64 1:1.2.1-1.3+b2 [191 kB] Fetched 191 kB in 0s (18.9 MB/s) dpkg-name: info: moved 'libxt6t64_1%3a1.2.1-1.3+b2_amd64.deb' to '/srv/rebuilderd/tmp/tmpnvfdse8a/libxt6t64_1.2.1-1.3+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libtasn1-6 amd64 4.21.0-2+b1 [49.3 kB] Fetched 49.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8u1tv_ty/libtasn1-6_4.21.0-2+b1_amd64.deb' Downloading dependency 259 of 408: gawk:amd64=1:5.3.2-1 Downloading dependency 260 of 408: libpam-runtime:amd64=1.7.0-8 Downloading dependency 261 of 408: libicu-dev:amd64=78.3-2 Downloading dependency 262 of 408: man-db:amd64=2.13.1-1 Downloading dependency 263 of 408: libcrypt1:amd64=1:4.5.1-1+b1 Downloading dependency 264 of 408: libjpeg62-turbo:amd64=1:3.1.3-4 Downloading dependency 265 of 408: dpkg-dev:amd64=1.23.7 Downloading dependency 266 of 408: libmodule-implementation-perl:amd64=0.09-2 Downloading dependency 267 of 408: libmpfr6:amd64=4.2.2-3 Downloading dependency 268 of 408: libdevel-callchecker-perl:amd64=0.009-3+b1 Downloading dependency 269 of 408: libunbound8:amd64=1.25.1-1 Downloading dependency 270 of 408: libvariable-magic-perl:amd64=0.64-1+b2 Downloading dependency 271 of 408: libsub-install-perl:amd64=0.929-1 Downloading dependency 272 of 408: libxcb-render0:amd64=1.17.0-2+b2 Downloading dependency 273 of 408: libparams-util-perl:amd64=1.102-3+b2 Downloading dependency 274 of 408: libcairo2:amd64=1.18.4-3+b1 Downloading dependency 275 of 408: libclang1-21:amd64=1:21.1.8-10 Downloading dependency 276 of 408: libgomp1:amd64=16.1.0-3 Downloading dependency 277 of 408: libz3-4:amd64=4.13.3-1.1 Downloading dependency 278 of 408: libconfig-properties-perl:amd64=1.80-3 Downloading dependency 279 of 408: libmro-compat-perl:amd64=0.15-2 Downloading dependency 280 of 408: libnghttp3-dev:amd64=1.17.0-1 Downloading dependency 281 of 408: libzstd1:amd64=1.5.7+dfsg-4 Downloading dependency 282 of 408: groff-base:amd64=1.24.1-1 Downloading dependency 283 of 408: perl-base:amd64=5.42.2-3 Downloading dependency 284 of 408: debianutils:amd64=5.23.2 Downloading dependency 285 of 408: libfontenc1:amd64=1:1.1.8-1+b3 Downloading dependency 286 of 408: libfile-stripnondeterminism-perl:amd64=1.15.1-1 Downloading dependency 287 of 408: libscalar-list-utils-perl:amd64=1:1.70-1+b1 Downloading dependency 288 of 408: libarchive-zip-perl:amd64=1.68-1 Downloading dependency 289 of 408: libk5crypto3:amd64=1.22.1-3 Downloading dependency 290 of 408: libhttp-message-perl:amd64=7.04-1 Downloading dependency 291 of 408: liblwp-mediatypes-perl:amd64=6.04-2 Downloading dependency 292 of 408: r-bioc-biostrings:amd64=2.80.1+dfsg-1 Downloading dependency 293 of 408: libclone-perl:amd64=0.50-1+b1 Downloading dependency 294 of 408: libsasl2-modules-db:amd64=2.1.28+dfsg1-11 Downloading dependency 295 of 408: r-cran-sys:amd64=3.4.3-2 Downloading dependency 296 of 408: libfribidi0:amd64=1.0.16-5+b1 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408: libmagic-mgc:amd64=1:5.47-4 Downloading dependency 313 of 408: cpp-16-x86-64-linux-gnu:amd64=16.1.0-3 Downloading dependency 314 of 408: xfonts-encodings:amd64=1:1.0.4-2.2 Downloading dependency 315 of 408: libsframe3:amd64=2.47-2 Downloading dependency 316 of 408: r-bioc-seqinfo:amd64=1.2.0+dfsg-1 Downloading dependency 317 of 408: xdg-utils:amd64=1.2.1-2 Downloading dependency 318 of 408: libclass-c3-perl:amd64=0.35-2 Downloading dependency 319 of 408: gfortran-16:amd64=16.1.0-3 Downloading dependency 320 of 408: libpackage-stash-perl:amd64=0.40-1 Downloading dependency 321 of 408: libstdc++-15-dev:amd64=15.3.0-2 Downloading dependency 322 of 408: r-cran-generics:amd64=0.1.4-1 Downloading dependency 323 of 408: libwww-curl-simple-perl:amd64=0.100191-3 Downloading dependency 324 of 408: libtinfo6:amd64=6.6+20260608-2 Downloading dependency 325 of 408: fonts-dejavu-mono:amd64=2.37-9 Downloading dependency 326 of 408: libngtcp2-crypto-gnutls8:amd64=1.24.0-1 Downloading dependency 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procps:amd64=2:4.0.6-3 Downloading dependency 343 of 408: libdevel-overloadinfo-perl:amd64=0.008-1 Downloading dependency 344 of 408: rpcsvc-proto:amd64=1.4.4-1 Downloading dependency 345 of 408: perl-modules-5.42:amd64=5.42.2-3 Downloading dependency 346 of 408: libbrotli1:amd64=1.2.0-3 Downloading dependency 347 of 408: linux-libc-dev:amd64=7.1.6-1 Downloading dependency 348 of 408: unzip:amd64=6.0-30 Downloading dependency 349 of 408: libpam-modules-bin:amd64=1.7.0-8 Downloading dependency 350 of 408: libnghttp2-14:amd64=1.70.0-1 Downloading dependency 351 of 408: libpaper2:amd64=2.2.5-0.4 Downloading dependency 352 of 408: libtsan2:amd64=16.1.0-3 Downloading dependency 353 of 408: libsharpyuv0:amd64=1.5.0-0.1+b2 Downloading dependency 354 of 408: libpng16-16t64:amd64=1.6.58-1 Downloading dependency 355 of 408: libncursesw6:amd64=6.6+20260608-2 Downloading dependency 356 of 408: dh-r:amd64=20260707 Downloading dependency 357 of 408: libdist-checkconflicts-perl:amd64=0.11-2 Downloading dependency 358 of 408: r-cran-jsonlite:amd64=2.0.0+dfsg-2 Downloading dependency 359 of 408: libkrb5-3:amd64=1.22.1-3 Downloading dependency 360 of 408: r-cran-formatr:amd64=1.14-2 Downloading dependency 361 of 408: libcurl4-gnutls:amd64=8.21.0-2 Downloading dependency 362 of 408: libc-bin:amd64=2.42-16 Downloading dependency 363 of 408: r-cran-lambda.r:amd64=1.2.4-2 Downloading dependency 364 of 408: gfortran-16-x86-64-linux-gnu:amd64=16.1.0-3 Downloading dependency 365 of 408: libpcre2-16-0:amd64=10.46-1+b2 Downloading dependency 366 of 408: r-cran-bitops:amd64=1.0-9-3 Downloading dependency 367 of 408: readline-common:amd64=8.3-4 Downloading dependency 368 of 408: libtool:amd64=2.5.4-11 Downloading dependency 369 of 408: libldap2:amd64=2.6.13+dfsg-1+b1 Downloading dependency 370 of 408: libcurl4-openssl-dev:amd64=8.21.0-2 Downloading dependency 371 of 408: fonts-freefont-otf:amd64=20211204+svn4273-4 Downloading dependency 372 of 408: libtcl8.6:amd64=8.6.18+dfsg-1 Downloading dependency 373 of 408: dpkg:amd64=1.23.7 Downloading dependency 374 of 408: findutils:amd64=4.10.0-4 Downloading dependency 375 of 408: dwz:amd64=0.17-1 Downloading dependency 376 of 408: libldap-dev:amd64=2.6.13+dfsg-1+b1 Downloading dependency 377 of 408: libpam0g:amd64=1.7.0-8 Downloading dependency 378 of 408: pkgconf-bin:amd64=2.5.1-4 Downloading dependency 379 of 408: libjbig0:amd64=2.1-6.1+b3 Downloading dependency 380 of 408: libtimedate-perl:amd64=2.3500-1 Downloading dependency 381 of 408: grep:amd64=3.12-1 Downloading dependency 382 of 408: libxt6t64:amd64=1:1.2.1-1.3+b2 Downloading dependency 383 of 408: libtasn1-6:amd64=4.21.0-2+b1 Downloading dependency 384 of 408: libgmpxx4ldbl:amd64=2:6.3.0+dfsg-5+b2Get:1 http://deb.debian.org/debian unstable/main amd64 libgmpxx4ldbl amd64 2:6.3.0+dfsg-5+b2 [328 kB] Fetched 328 kB in 0s (25.1 MB/s) dpkg-name: info: moved 'libgmpxx4ldbl_2%3a6.3.0+dfsg-5+b2_amd64.deb' to '/srv/rebuilderd/tmp/tmpgwtoohyt/libgmpxx4ldbl_6.3.0+dfsg-5+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libswitch-perl all 2.17-3 [20.3 kB] Fetched 20.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp05wnolgk/libswitch-perl_2.17-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 gcc amd64 4:16.1.0-3 [5148 B] Fetched 5148 B in 0s (0 B/s) dpkg-name: info: moved 'gcc_4%3a16.1.0-3_amd64.deb' to '/srv/rebuilderd/tmp/tmpgluuy26c/gcc_16.1.0-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libpangoft2-1.0-0 amd64 1.58.0-1 [53.1 kB] Fetched 53.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8ai_7wke/libpangoft2-1.0-0_1.58.0-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgdbm6t64 amd64 1.26-1+b2 [77.7 kB] Fetched 77.7 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3vfqmu86/libgdbm6t64_1.26-1+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 r-base-core amd64 4.6.1-1 [28.4 MB] Fetched 28.4 MB in 0s (188 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppz212xx2/r-base-core_4.6.1-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 tar amd64 1.35+dfsg-4 [817 kB] Fetched 817 kB in 0s (72.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvl8m4bte/tar_1.35+dfsg-4_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libtirpc3t64 amd64 1.3.7+ds-1 [82.9 kB] Fetched 82.9 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpg7v1l608/libtirpc3t64_1.3.7+ds-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libattr1 amd64 1:2.6.0-1 [24.7 kB] Fetched 24.7 kB in 0s (0 B/s) dpkg-name: info: moved 'libattr1_1%3a2.6.0-1_amd64.deb' to '/srv/rebuilderd/tmp/tmp2bb7sn4q/libattr1_2.6.0-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libclang-cpp21 amd64 1:21.1.8-10 [12.8 MB] Fetched 12.8 MB in 0s (186 MB/s) dpkg-name: info: moved 'libclang-cpp21_1%3a21.1.8-10_amd64.deb' to '/srv/rebuilderd/tmp/tmpndhcd2to/libclang-cpp21_21.1.8-10_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libb-hooks-endofscope-perl all 0.28-2 [17.6 kB] Fetched 17.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvrkqie_n/libb-hooks-endofscope-perl_0.28-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgmp10 amd64 2:6.3.0+dfsg-5+b2 [560 kB] Fetched 560 kB in 0s (55.4 MB/s) dpkg-name: info: moved 'libgmp10_2%3a6.3.0+dfsg-5+b2_amd64.deb' to '/srv/rebuilderd/tmp/tmpf2g83ug5/libgmp10_6.3.0+dfsg-5+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libhttp-date-perl all 6.08-1 [12.1 kB] Fetched 12.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzs2e92us/libhttp-date-perl_6.08-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 zip amd64 3.0-15 [235 kB] Fetched 235 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdma901mm/zip_3.0-15_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libgnutls-dane0t64 amd64 3.8.13-1 [496 kB] Fetched 496 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpq4a6nxi4/libgnutls-dane0t64_3.8.13-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libtasn1-6-dev amd64 4.21.0-2+b1 [98.6 kB] Fetched 98.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0zhk7se0/libtasn1-6-dev_4.21.0-2+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 diffutils amd64 1:3.12-1 [405 kB] Fetched 405 kB in 0s (0 B/s) dpkg-name: info: moved 'diffutils_1%3a3.12-1_amd64.deb' to '/srv/rebuilderd/tmp/tmpcaydvmhs/diffutils_3.12-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libx11-data all 2:1.8.13-1 [346 kB] Fetched 346 kB in 0s (0 B/s) dpkg-name: info: moved 'libx11-data_2%3a1.8.13-1_all.deb' to '/srv/rebuilderd/tmp/tmp51obmg4o/libx11-data_1.8.13-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libsystemd0 amd64 261.2-1 [468 kB] Fetched 468 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbxnbdxbu/libsystemd0_261.2-1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 zlib1g amd64 1:1.3.dfsg+really1.3.2-3 [90.9 kB] Fetched 90.9 kB in 0s (0 B/s) dpkg-name: info: moved 'zlib1g_1%3a1.3.dfsg+really1.3.2-3_amd64.deb' to '/srv/rebuilderd/tmp/tmpug6899iu/zlib1g_1.3.dfsg+really1.3.2-3_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libxmuu1 amd64 2:1.1.3-4+b1 [22.0 kB] Fetched 22.0 kB in 0s (0 B/s) dpkg-name: info: moved 'libxmuu1_2%3a1.1.3-4+b1_amd64.deb' to '/srv/rebuilderd/tmp/tmpdj6cbw0v/libxmuu1_1.1.3-4+b1_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libwww-curl-perl amd64 4.17-13+b2 [58.8 kB] Fetched 58.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2yjj63ha/libwww-curl-perl_4.17-13+b2_amd64.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 ncurses-base all 6.6+20260608-2 [276 kB] Fetched 276 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoiqwo1ki/ncurses-base_6.6+20260608-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main amd64 libzstd-dev amd64 1.5.7+dfsg-4 [371 kB] Fetched 371 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpeobbmmy_/libzstd-dev_1.5.7+dfsg-4_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260124T082420Z forky/main amd64 r-cran-futile.logger all 1.4.3-4 [98.4 kB] Fetched 98.4 kB in 1s (68.8 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr4t7zy3c/r-cran-futile.logger_1.4.3-4_all.deb' dpkg-buildpackage: info: source package debootsnap-dummy dpkg-buildpackage: info: source version 1.0 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Equivs Dummy Package Generator dpkg-buildpackage: info: host architecture amd64 dpkg-source --before-build . debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/debootsnap-dummy/ dh_install dh_installdocs dh_installchangelogs dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'debootsnap-dummy' in '../debootsnap-dummy_1.0_all.deb'. dpkg-genbuildinfo --build=binary -O../debootsnap-dummy_1.0_amd64.buildinfo dpkg-genchanges --build=binary -O../debootsnap-dummy_1.0_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) The package has been created. Attention, the package has been created in the /srv/rebuilderd/tmp/tmpzmsmu8im/cache directory, not in ".." as indicated by the message above! I: automatically chosen mode: unshare I: chroot architecture amd64 is equal to the host's architecture I: using /srv/rebuilderd/tmp/mmdebstrap.fALp55HyIF as tempdir I: running --setup-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/setup00.sh /srv/rebuilderd/tmp/mmdebstrap.fALp55HyIF 127.0.0.1 - - [04/Aug/2026 16:22:19] code 404, message File not found 127.0.0.1 - - [04/Aug/2026 16:22:19] "GET /./InRelease HTTP/1.1" 404 - Ign:1 http://localhost:42027 ./ InRelease 127.0.0.1 - - [04/Aug/2026 16:22:19] "GET /./Release HTTP/1.1" 200 - Get:2 http://localhost:42027 ./ Release [462 B] 127.0.0.1 - - [04/Aug/2026 16:22:19] code 404, message File not found 127.0.0.1 - - [04/Aug/2026 16:22:19] "GET /./Release.gpg HTTP/1.1" 404 - Ign:3 http://localhost:42027 ./ Release.gpg 127.0.0.1 - - [04/Aug/2026 16:22:19] "GET /./Packages HTTP/1.1" 200 - Get:4 http://localhost:42027 ./ Packages [508 kB] Fetched 509 kB in 0s (31.4 MB/s) Reading package lists... usr-is-merged found but not real -- not running merged-usr setup hook I: skipping apt-get update because it was already run I: downloading packages with apt... 127.0.0.1 - - [04/Aug/2026 16:22:19] "GET /./gcc-16-base_16.1.0-3_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [04/Aug/2026 16:22:19] "GET /./libc-gconv-modules-extra_2.42-17_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [04/Aug/2026 16:22:19] "GET /./libc6_2.42-17_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [04/Aug/2026 16:22:19] "GET /./libgcc-s1_16.1.0-3_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [04/Aug/2026 16:22:19] "GET /./mawk_1.3.4.20260302-1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [04/Aug/2026 16:22:19] "GET /./base-files_14.2_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [04/Aug/2026 16:22:19] "GET /./libtinfo6_6.6%2b20260608-2_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [04/Aug/2026 16:22:19] "GET /./debianutils_5.23.2_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [04/Aug/2026 16:22:19] "GET /./bash_5.3-3_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [04/Aug/2026 16:22:19] "GET /./libacl1_2.4.0-1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [04/Aug/2026 16:22:19] "GET /./libattr1_2.6.0-1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [04/Aug/2026 16:22:19] "GET /./libgmp10_6.3.0%2bdfsg-5%2bb2_amd64.deb HTTP/1.1" 200 - 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I: running --extract-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/extract00.sh /srv/rebuilderd/tmp/mmdebstrap.fALp55HyIF 127.0.0.1 - - [04/Aug/2026 16:22:20] code 404, message File not found 127.0.0.1 - - [04/Aug/2026 16:22:20] "GET /./InRelease HTTP/1.1" 404 - Ign:1 http://localhost:42027 ./ InRelease 127.0.0.1 - - [04/Aug/2026 16:22:20] "GET /./Release HTTP/1.1" 304 - Hit:2 http://localhost:42027 ./ Release 127.0.0.1 - - [04/Aug/2026 16:22:20] code 404, message File not found 127.0.0.1 - - [04/Aug/2026 16:22:20] "GET /./Release.gpg HTTP/1.1" 404 - Ign:3 http://localhost:42027 ./ Release.gpg Reading package lists... usr-is-merged found but not real -- not running merged-usr extract hook I: installing essential packages... 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127.0.0.1 - - [04/Aug/2026 16:22:40] "GET /./libswitch-perl_2.17-3_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [04/Aug/2026 16:22:40] "GET /./dh-r_20260707_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [04/Aug/2026 16:22:40] "GET /./r-cran-bitops_1.0-9-3_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [04/Aug/2026 16:22:40] "GET /./libldap-dev_2.6.13%2bdfsg-1%2bb1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [04/Aug/2026 16:22:40] "GET /./libcurl4-openssl-dev_8.21.0-2_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [04/Aug/2026 16:22:40] "GET /./debootsnap-dummy_1.0_all.deb HTTP/1.1" 200 - I: running --customize-hook directly: /srv/rebuilderd/tmp/tmpzmsmu8im/apt_install.sh /srv/rebuilderd/tmp/mmdebstrap.fALp55HyIF Reading package lists... Building dependency tree... Reading state information... gzip is already the newest version (1.13-1). r-cran-curl is already the newest version (7.1.0+dfsg-2). r-cran-curl set to manually installed. make is already the newest version (4.4.1-3). make set to manually installed. debhelper is already the newest version (14.3). debhelper set to manually installed. sensible-utils is already the newest version (0.0.26). sensible-utils set to manually installed. tzdata is already the newest version (2026c-1). tzdata set to manually installed. libtry-tiny-perl is already the newest version (0.32-1). libtry-tiny-perl set to manually installed. libsasl2-2 is already the newest version (2.1.28+dfsg1-11). libsasl2-2 set to manually installed. r-cran-cpp11 is already the newest version (0.5.5-1). r-cran-cpp11 set to manually installed. libunistring-dev is already the newest version (1.4.2-1). libunistring-dev set to manually installed. libaudit-common is already the newest version (1:4.1.2-1). libsub-exporter-progressive-perl is already the newest version (0.001013-3). libsub-exporter-progressive-perl set to manually installed. m4 is already the newest version (1.4.21-1). m4 set to manually installed. binutils is already the newest version (2.47-2). binutils set to manually installed. gfortran-x86-64-linux-gnu is already the newest version (4:16.1.0-3). gfortran-x86-64-linux-gnu set to manually installed. bzip2 is already the newest version (1.0.8-6+b2). bzip2 set to manually installed. libsmartcols1 is already the newest version (2.42.2-2). libxext6 is already the newest version (2:1.3.4-1+b4). libxext6 set to manually installed. libdevel-globaldestruction-perl is already the newest version (0.14-4). libdevel-globaldestruction-perl set to manually installed. libpixman-1-0 is already the newest version (0.46.4-1+b2). libpixman-1-0 set to manually installed. gettext is already the newest version (1.0-3). gettext set to manually installed. libpcre2-8-0 is already the newest version (10.46-1+b2). fonts-urw-base35 is already the newest version (20200910-9). fonts-urw-base35 set to manually installed. g++ is already the newest version (4:16.1.0-3). g++ set to manually installed. libdynaloader-functions-perl is already the newest version (0.004-2). libdynaloader-functions-perl set to manually installed. xauth is already the newest version (1:1.1.2-1.1). xauth set to manually installed. libdpkg-perl is already the newest version (1.23.7). libdpkg-perl set to manually installed. libsub-exporter-perl is already the newest version (0.990-1). libsub-exporter-perl set to manually installed. libicu78 is already the newest version (78.3-2). libicu78 set to manually installed. libdeflate0 is already the newest version (1.25-1). libdeflate0 set to manually installed. libjpeg-dev is already the newest version (1:3.1.3-4). libjpeg-dev set to manually installed. libperl5.42 is already the newest version (5.42.2-3). libperl5.42 set to manually installed. r-base-dev is already the newest version (4.6.1-1). r-base-dev set to manually installed. libencode-locale-perl is already the newest version (1.05-3). libencode-locale-perl set to manually installed. fonts-liberation is already the newest version (1:2.1.5-3). fonts-liberation set to manually installed. libctf-nobfd0 is already the newest version (2.47-2). libctf-nobfd0 set to manually installed. libedit2 is already the newest version (3.1-20260512-1). libedit2 set to manually installed. libbz2-dev is already the newest version (1.0.8-6+b2). libbz2-dev set to manually installed. r-cran-crayon is already the newest version (1.5.3-2). r-cran-crayon set to manually installed. libgfortran-16-dev is already the newest version (16.1.0-3). libgfortran-16-dev set to manually installed. libreadline8t64 is already the newest version (8.3-4). libreadline8t64 set to manually installed. libgcc-16-dev is already the newest version (16.1.0-3). libgcc-16-dev set to manually installed. libalgorithm-c3-perl is already the newest version (0.11-2). libalgorithm-c3-perl set to manually installed. r-cran-snow is already the newest version (1:0.4.4-2). r-cran-snow set to manually installed. r-pkg-team-core-architecture is already the newest version (20260707). r-pkg-team-core-architecture set to manually installed. libthai-data is already the newest version (0.1.30-3). libthai-data set to manually installed. libxdmcp6 is already the newest version (1:1.1.5-2+b1). libxdmcp6 set to manually installed. libatomic1 is already the newest version (16.1.0-3). libatomic1 set to manually installed. libx11-6 is already the newest version (2:1.8.13-1). libx11-6 set to manually installed. r-cran-httr is already the newest version (1.4.8+dfsg-1). r-cran-httr set to manually installed. libpcre2-posix3 is already the newest version (10.46-1+b2). libpcre2-posix3 set to manually installed. libglib2.0-0t64 is already the newest version (2.88.3-2). libglib2.0-0t64 set to manually installed. bash is already the newest version (5.3-3). libtext-charwidth-perl is already the newest version (0.04-12+b1). libtext-charwidth-perl set to manually installed. r-bioc-ucsc.utils is already the newest version (1.8.0+dfsg-1). r-bioc-ucsc.utils set to manually installed. librtmp-dev is already the newest version (2.6-1). librtmp-dev set to manually installed. libmodule-runtime-conflicts-perl is already the newest version (0.003-2). libmodule-runtime-conflicts-perl set to manually installed. libssl-dev is already the newest version (3.6.3-1). libssl-dev set to manually installed. libclass-load-perl is already the newest version (0.25-2). libclass-load-perl set to manually installed. libsm6 is already the newest version (2:1.2.6-1+b2). libsm6 set to manually installed. libtiff6 is already the newest version (4.7.2-1). libtiff6 set to manually installed. libpaper-utils is already the newest version (2.2.5-0.4). libpaper-utils set to manually installed. libfreetype6 is already the newest version (2.14.3+dfsg-2). libfreetype6 set to manually installed. libopenblas0-pthread is already the newest version (0.3.30+ds-3). libopenblas0-pthread set to manually installed. patch is already the newest version (2.8-2). patch set to manually installed. libaudit1 is already the newest version (1:4.1.2-1+b1). gettext-base is already the newest version (1.0-3). gettext-base set to manually installed. libssl3t64 is already the newest version (3.6.3-1). libgc1 is already the newest version (1:8.2.12-1). libgc1 set to manually installed. r-cran-openssl is already the newest version (2.4.2+dfsg-1). r-cran-openssl set to manually installed. libgprofng0 is already the newest version (2.47-2). libgprofng0 set to manually installed. libharfbuzz0b is already the newest version (12.3.2-2+b2). libharfbuzz0b set to manually installed. libidn2-0 is already the newest version (2.3.8-5). libidn2-0 set to manually installed. libexpat1 is already the newest version (2.8.2-1). libexpat1 set to manually installed. libpng-dev is already the newest version (1.6.58-1). libpng-dev set to manually installed. libmpc3 is already the newest version (1.3.1-3). libmpc3 set to manually installed. libobjc-15-dev is already the newest version (15.3.0-2). libobjc-15-dev set to manually installed. file is already the newest version (1:5.47-4). file set to manually installed. fonts-noto-core is already the newest version (20201225-6). fonts-noto-core set to manually installed. libcom-err2 is already the newest version (1.47.4-1). libcom-err2 set to manually installed. libgssapi-krb5-2 is already the newest version (1.22.1-3). libgssapi-krb5-2 set to manually installed. x11-common is already the newest version (1:7.7+26). x11-common set to manually installed. libbinutils is already the newest version (2.47-2). libbinutils set to manually installed. libkrb5-dev is already the newest version (1.22.1-3). libkrb5-dev set to manually installed. libssh2-1-dev is already the newest version (1.11.1-5). libssh2-1-dev set to manually installed. libxss1 is already the newest version (1:1.2.3-1+b4). libxss1 set to manually installed. gcc-16-base is already the newest version (16.1.0-3). libeval-closure-perl is already the newest version (0.14-3). libeval-closure-perl set to manually installed. liblapack-dev is already the newest version (3.12.1-8). liblapack-dev set to manually installed. po-debconf is already the newest version (1.0.22). po-debconf set to manually installed. libnghttp3-9 is already the newest version (1.17.0-1). libnghttp3-9 set to manually installed. libkadm5clnt-mit12 is already the newest version (1.22.1-3). libkadm5clnt-mit12 set to manually installed. xz-utils is already the newest version (5.8.3-1). xz-utils set to manually installed. fonts-noto-mono is already the newest version (20201225-6). fonts-noto-mono set to manually installed. libuuid1 is already the newest version (2.42.2-2). libjansson4 is already the newest version (2.15.1-1). libjansson4 set to manually installed. openssl-provider-legacy is already the newest version (3.6.3-1). fonts-dejavu-core is already the newest version (2.37-9). fonts-dejavu-core set to manually installed. libxau6 is already the newest version (1:1.0.11-1+b2). libxau6 set to manually installed. libubsan1 is already the newest version (16.1.0-3). libubsan1 set to manually installed. libseccomp2 is already the newest version (2.6.1-1). libseccomp2 set to manually installed. dh-autoreconf is already the newest version (22). dh-autoreconf set to manually installed. autotools-dev is already the newest version (20240727.1+nmu1). autotools-dev set to manually installed. libmount1 is already the newest version (2.42.2-2). libtk8.6 is already the newest version (8.6.18-1). libtk8.6 set to manually installed. cpp-15 is already the newest version (15.3.0-2). cpp-15 set to manually installed. libboost-dev is already the newest version (1.90.0.2). libboost-dev set to manually installed. icu-devtools is already the newest version (78.3-2). icu-devtools set to manually installed. gcc-x86-64-linux-gnu is already the newest version (4:16.1.0-3). gcc-x86-64-linux-gnu set to manually installed. gcc-15-base is already the newest version (15.3.0-2). gcc-15-base set to manually installed. libproc2-1 is already the newest version (2:4.0.6-3). libproc2-1 set to manually installed. libobjc4 is already the newest version (16.1.0-3). libobjc4 set to manually installed. libkadm5srv-mit12 is already the newest version (1.22.1-3). libkadm5srv-mit12 set to manually installed. libitm1 is already the newest version (16.1.0-3). libitm1 set to manually installed. libasan8 is already the newest version (16.1.0-3). libasan8 set to manually installed. r-bioc-genomicranges is already the newest version (1.64.0+dfsg-1). r-bioc-genomicranges set to manually installed. r-cran-r6 is already the newest version (2.6.1-2). r-cran-r6 set to manually installed. libice6 is already the newest version (2:1.1.1-1+b2). libice6 set to manually installed. libgdbm-compat4t64 is already the newest version (1.26-1+b2). libgdbm-compat4t64 set to manually installed. r-bioc-biocparallel is already the newest version (1.46.0-1). r-bioc-biocparallel set to manually installed. libngtcp2-crypto-ossl0 is already the newest version (1.24.0-1). libngtcp2-crypto-ossl0 set to manually installed. liburi-perl is already the newest version (5.35-1). liburi-perl set to manually installed. libctf0 is already the newest version (2.47-2). libctf0 set to manually installed. sed is already the newest version (4.9-3). libgfortran5 is already the newest version (16.1.0-3). libgfortran5 set to manually installed. libio-html-perl is already the newest version (1.004-3). libio-html-perl set to manually installed. liblapack3 is already the newest version (3.12.1-8). liblapack3 set to manually installed. zlib1g-dev is already the newest version (1:1.3.dfsg+really1.3.2-3). zlib1g-dev set to manually installed. libncurses6 is already the newest version (6.6+20260608-2). libncurses6 set to manually installed. libp11-kit0 is already the newest version (0.26.4-1). libp11-kit0 set to manually installed. libtirpc-common is already the newest version (1.3.7+ds-1). libtirpc-common set to manually installed. fontconfig-config is already the newest version (2.17.1-5). fontconfig-config set to manually installed. libstdc++-16-dev is already the newest version (16.1.0-3). libstdc++-16-dev set to manually installed. autoconf is already the newest version (2.73-2). autoconf set to manually installed. libevent-2.1-7t64 is already the newest version (2.1.12-stable-10+b2). libevent-2.1-7t64 set to manually installed. libdata-optlist-perl is already the newest version (0.114-1). libdata-optlist-perl set to manually installed. libgraphite2-3 is already the newest version (1.3.15-2). libgraphite2-3 set to manually installed. libblas3 is already the newest version (3.12.1-8). libblas3 set to manually installed. libclang-common-21-dev is already the newest version (1:21.1.8-10). libclang-common-21-dev set to manually installed. automake is already the newest version (1:1.18.1-4). automake set to manually installed. libssh2-1t64 is already the newest version (1.11.1-5). libssh2-1t64 set to manually installed. libgssrpc4t64 is already the newest version (1.22.1-3). libgssrpc4t64 set to manually installed. libp11-kit-dev is already the newest version (0.26.4-1). libp11-kit-dev set to manually installed. llvm-21-linker-tools is already the newest version (1:21.1.8-10). llvm-21-linker-tools set to manually installed. dctrl-tools is already the newest version (2.24-3+b1). dctrl-tools set to manually installed. gfortran is already the newest version (4:16.1.0-3). gfortran set to manually installed. libdevel-stacktrace-perl is already the newest version (2.0500-1). libdevel-stacktrace-perl set to manually installed. libmoose-perl is already the newest version (2.4000-1+b2). libmoose-perl set to manually installed. dh-strip-nondeterminism is already the newest version (1.15.1-1). dh-strip-nondeterminism set to manually installed. libllvm21 is already the newest version (1:21.1.8-10). libllvm21 set to manually installed. libncurses-dev is already the newest version (6.6+20260608-2). libncurses-dev set to manually installed. libbrotli-dev is already the newest version (1.2.0-3). libbrotli-dev set to manually installed. r-cran-mime is already the newest version (0.13-2). r-cran-mime set to manually installed. liblerc4 is already the newest version (4.2.0+ds-1). liblerc4 set to manually installed. libcurl4t64 is already the newest version (8.21.0-2). libcurl4t64 set to manually installed. libpsl5t64 is already the newest version (0.23.1-1). libpsl5t64 set to manually installed. libselinux1 is already the newest version (3.11-2). libmodule-runtime-perl is already the newest version (0.018-1). libmodule-runtime-perl set to manually installed. r-bioc-rhtslib is already the newest version (3.8.0+dfsg-1). r-bioc-rhtslib set to manually installed. build-essential is already the newest version (12.12). build-essential set to manually installed. debconf is already the newest version (1.5.92). cpp-15-x86-64-linux-gnu is already the newest version (15.3.0-2). cpp-15-x86-64-linux-gnu set to manually installed. r-cran-futile.options is already the newest version (1.0.1-3). r-cran-futile.options set to manually installed. libkrb5support0 is already the newest version (1.22.1-3). libkrb5support0 set to manually installed. libpkgconf7 is already the newest version (2.5.1-4). libpkgconf7 set to manually installed. libxcb1 is already the newest version (1.17.0-2+b2). libxcb1 set to manually installed. libkeyutils1 is already the newest version (1.6.3-6+b2). libkeyutils1 set to manually installed. perl is already the newest version (5.42.2-3). perl set to manually installed. libdebhelper-perl is already the newest version (14.3). libdebhelper-perl set to manually installed. libblas-dev is already the newest version (3.12.1-8). libblas-dev set to manually installed. r-bioc-iranges is already the newest version (2.46.0-1). r-bioc-iranges set to manually installed. lsb-base is already the newest version (11.6). lsb-base set to manually installed. g++-16 is already the newest version (16.1.0-3). g++-16 set to manually installed. libpam-modules is already the newest version (1.7.0-8). libpcre2-dev is already the newest version (10.46-1+b2). libpcre2-dev set to manually installed. pkgconf is already the newest version (2.5.1-4). pkgconf set to manually installed. fontconfig is already the newest version (2.17.1-5). fontconfig set to manually installed. gcc-15 is already the newest version (15.3.0-2). gcc-15 set to manually installed. libc6 is already the newest version (2.42-17). libcap-ng0 is already the newest version (0.9.3-1+b1). libtext-wrapi18n-perl is already the newest version (0.06-11). libtext-wrapi18n-perl set to manually installed. libacl1 is already the newest version (2.4.0-1). r-bioc-genomeinfodb is already the newest version (1.48.0+dfsg-1). r-bioc-genomeinfodb set to manually installed. libffi8 is already the newest version (3.7.1-2). libffi8 set to manually installed. ca-certificates is already the newest version (20260601). ca-certificates set to manually installed. libngtcp2-crypto-ossl-dev is already the newest version (1.24.0-1). libngtcp2-crypto-ossl-dev set to manually installed. gcc-16 is already the newest version (16.1.0-3). gcc-16 set to manually installed. libreadline-dev is already the newest version (8.3-4). libreadline-dev set to manually installed. libwebp7 is already the newest version (1.5.0-0.1+b2). libwebp7 set to manually installed. libgmp-dev is already the newest version (2:6.3.0+dfsg-5+b2). libgmp-dev set to manually installed. libngtcp2-dev is already the newest version (1.24.0-1). libngtcp2-dev set to manually installed. libnettle8t64 is already the newest version (3.10.2-1+b1). libnettle8t64 set to manually installed. libxcb-shm0 is already the newest version (1.17.0-2+b2). libxcb-shm0 set to manually installed. libparams-classify-perl is already the newest version (0.015-2+b6). libparams-classify-perl set to manually installed. libisl23 is already the newest version (0.28-1). libisl23 set to manually installed. r-cran-askpass is already the newest version (1.2.1-3). r-cran-askpass set to manually installed. clang-21 is already the newest version (1:21.1.8-10). clang-21 set to manually installed. libcc1-0 is already the newest version (16.1.0-3). libcc1-0 set to manually installed. fonts-freefont-ttf is already the newest version (20211204+svn4273-4). fonts-freefont-ttf set to manually installed. gcc-16-x86-64-linux-gnu is already the newest version (16.1.0-3). gcc-16-x86-64-linux-gnu set to manually installed. libxft2 is already the newest version (2.3.6-1+b5). libxft2 set to manually installed. base-passwd is already the newest version (3.6.8). libpsl-dev is already the newest version (0.23.1-1). libpsl-dev set to manually installed. libbz2-1.0 is already the newest version (1.0.8-6+b2). libgcc-s1 is already the newest version (16.1.0-3). r-bioc-s4vectors is already the newest version (0.50.1+dfsg-1). r-bioc-s4vectors set to manually installed. libxrender1 is already the newest version (1:0.9.12-1+b2). libxrender1 set to manually installed. libb-hooks-op-check-perl is already the newest version (0.22-3+b5). libb-hooks-op-check-perl set to manually installed. libfontconfig1 is already the newest version (2.17.1-5). libfontconfig1 set to manually installed. libgnutls28-dev is already the newest version (3.8.13-1). libgnutls28-dev set to manually installed. r-cran-bh is already the newest version (1.90.0-1). r-cran-bh set to manually installed. libthai0 is already the newest version (0.1.30-3). libthai0 set to manually installed. libfile-which-perl is already the newest version (1.27-2). libfile-which-perl set to manually installed. openssl is already the newest version (3.6.3-1). openssl set to manually installed. libquadmath0 is already the newest version (16.1.0-3). libquadmath0 set to manually installed. libdatrie1 is already the newest version (0.2.14-2). libdatrie1 set to manually installed. libgnutls30t64 is already the newest version (3.8.13-1). libgnutls30t64 set to manually installed. ncurses-bin is already the newest version (6.6+20260608-2). libkdb5-10t64 is already the newest version (1.22.1-3). libkdb5-10t64 set to manually installed. intltool-debian is already the newest version (0.35.0+20060710.6). intltool-debian set to manually installed. util-linux is already the newest version (2.42.2-2). libc-dev-bin is already the newest version (2.42-17). libc-dev-bin set to manually installed. libdeflate-dev is already the newest version (1.25-1). libdeflate-dev set to manually installed. libhogweed6t64 is already the newest version (3.10.2-1+b1). libhogweed6t64 set to manually installed. libclass-load-xs-perl is already the newest version (0.10-2+b5). libclass-load-xs-perl set to manually installed. binutils-x86-64-linux-gnu is already the newest version (2.47-2). binutils-x86-64-linux-gnu set to manually installed. fonts-texgyre is already the newest version (20180621-7). fonts-texgyre set to manually installed. liblsan0 is already the newest version (16.1.0-3). liblsan0 set to manually installed. libxml2-16 is already the newest version (2.15.3+dfsg-1). libxml2-16 set to manually installed. comerr-dev is already the newest version (2.1-1.47.4-1). comerr-dev set to manually installed. libstdc++6 is already the newest version (16.1.0-3). libstdc++6 set to manually installed. g++-16-x86-64-linux-gnu is already the newest version (16.1.0-3). g++-16-x86-64-linux-gnu set to manually installed. libnamespace-clean-perl is already the newest version (0.27-2). libnamespace-clean-perl set to manually installed. libnghttp2-dev is already the newest version (1.70.0-1). libnghttp2-dev set to manually installed. libblkid1 is already the newest version (2.42.2-2). r-bioc-biocgenerics is already the newest version (0.58.1-1). r-bioc-biocgenerics set to manually installed. fonts-croscore is already the newest version (20201225-6). fonts-croscore set to manually installed. librtmp1 is already the newest version (2.6-1). librtmp1 set to manually installed. libboost1.90-dev is already the newest version (1.90.0-6). libboost1.90-dev set to manually installed. libsub-identify-perl is already the newest version (0.14-4+b1). libsub-identify-perl set to manually installed. bsdextrautils is already the newest version (2.42.2-2). bsdextrautils set to manually installed. libc6-dev is already the newest version (2.42-17). libc6-dev set to manually installed. liblzma5 is already the newest version (5.8.3-1). libpango-1.0-0 is already the newest version (1.58.0-1). libpango-1.0-0 set to manually installed. libudev1 is already the newest version (261.2-1). r-bioc-xvector is already the newest version (0.52.0-1). r-bioc-xvector set to manually installed. libhwasan0 is already the newest version (16.1.0-3). libhwasan0 set to manually installed. libdebconfclient0 is already the newest version (0.283). libgcc-15-dev is already the newest version (15.3.0-2). libgcc-15-dev set to manually installed. libmagic1t64 is already the newest version (1:5.47-4). libmagic1t64 set to manually installed. libelf1t64 is already the newest version (0.195-1). libelf1t64 set to manually installed. libidn2-dev is already the newest version (2.3.8-5). libidn2-dev set to manually installed. libpcre2-32-0 is already the newest version (10.46-1+b2). libpcre2-32-0 set to manually installed. libjpeg62-turbo-dev is already the newest version (1:3.1.3-4). libjpeg62-turbo-dev set to manually installed. ucf is already the newest version (3.0056). ucf set to manually installed. hostname is already the newest version (3.25). libc-gconv-modules-extra is already the newest version (2.42-17). libunistring5 is already the newest version (1.4.2-1). libunistring5 set to manually installed. gawk is already the newest version (1:5.3.2-1). gawk set to manually installed. libpam-runtime is already the newest version (1.7.0-8). libicu-dev is already the newest version (78.3-2). libicu-dev set to manually installed. man-db is already the newest version (2.13.1-1). man-db set to manually installed. libcrypt1 is already the newest version (1:4.5.1-1+b1). libjpeg62-turbo is already the newest version (1:3.1.3-4). libjpeg62-turbo set to manually installed. dpkg-dev is already the newest version (1.23.7). dpkg-dev set to manually installed. libmodule-implementation-perl is already the newest version (0.09-2). libmodule-implementation-perl set to manually installed. libmpfr6 is already the newest version (4.2.2-3). libmpfr6 set to manually installed. libdevel-callchecker-perl is already the newest version (0.009-3+b1). libdevel-callchecker-perl set to manually installed. libunbound8 is already the newest version (1.25.1-1). libunbound8 set to manually installed. libvariable-magic-perl is already the newest version (0.64-1+b2). libvariable-magic-perl set to manually installed. libsub-install-perl is already the newest version (0.929-1). libsub-install-perl set to manually installed. libxcb-render0 is already the newest version (1.17.0-2+b2). libxcb-render0 set to manually installed. libparams-util-perl is already the newest version (1.102-3+b2). libparams-util-perl set to manually installed. libcairo2 is already the newest version (1.18.4-3+b1). libcairo2 set to manually installed. libclang1-21 is already the newest version (1:21.1.8-10). libclang1-21 set to manually installed. libgomp1 is already the newest version (16.1.0-3). libgomp1 set to manually installed. libz3-4 is already the newest version (4.13.3-1.1). libz3-4 set to manually installed. libconfig-properties-perl is already the newest version (1.80-3). libconfig-properties-perl set to manually installed. libmro-compat-perl is already the newest version (0.15-2). libmro-compat-perl set to manually installed. libnghttp3-dev is already the newest version (1.17.0-1). libnghttp3-dev set to manually installed. libzstd1 is already the newest version (1.5.7+dfsg-4). groff-base is already the newest version (1.24.1-1). groff-base set to manually installed. perl-base is already the newest version (5.42.2-3). debianutils is already the newest version (5.23.2). libfontenc1 is already the newest version (1:1.1.8-1+b3). libfontenc1 set to manually installed. libfile-stripnondeterminism-perl is already the newest version (1.15.1-1). libfile-stripnondeterminism-perl set to manually installed. libscalar-list-utils-perl is already the newest version (1:1.70-1+b1). libscalar-list-utils-perl set to manually installed. libarchive-zip-perl is already the newest version (1.68-1). libarchive-zip-perl set to manually installed. libk5crypto3 is already the newest version (1.22.1-3). libk5crypto3 set to manually installed. libhttp-message-perl is already the newest version (7.04-1). libhttp-message-perl set to manually installed. liblwp-mediatypes-perl is already the newest version (6.04-2). liblwp-mediatypes-perl set to manually installed. r-bioc-biostrings is already the newest version (2.80.1+dfsg-1). r-bioc-biostrings set to manually installed. libclone-perl is already the newest version (0.50-1+b1). libclone-perl set to manually installed. libsasl2-modules-db is already the newest version (2.1.28+dfsg1-11). libsasl2-modules-db set to manually installed. r-cran-sys is already the newest version (3.4.3-2). r-cran-sys set to manually installed. libfribidi0 is already the newest version (1.0.16-5+b1). libfribidi0 set to manually installed. liblzma-dev is already the newest version (5.8.3-1). liblzma-dev set to manually installed. libbsd0 is already the newest version (0.12.2-3). libbsd0 set to manually installed. g++-x86-64-linux-gnu is already the newest version (4:16.1.0-3). g++-x86-64-linux-gnu set to manually installed. cpp-x86-64-linux-gnu is already the newest version (4:16.1.0-3). cpp-x86-64-linux-gnu set to manually installed. nettle-dev is already the newest version (3.10.2-1+b1). nettle-dev set to manually installed. krb5-multidev is already the newest version (1.22.1-3). krb5-multidev set to manually installed. binutils-common is already the newest version (2.47-2). binutils-common set to manually installed. mawk is already the newest version (1.3.4.20260302-1). libpackage-deprecationmanager-perl is already the newest version (0.18-1). libpackage-deprecationmanager-perl set to manually installed. libmd0 is already the newest version (1.2.0-2). libtirpc-dev is already the newest version (1.3.7+ds-1). libtirpc-dev set to manually installed. init-system-helpers is already the newest version (1.69). cpp is already the newest version (4:16.1.0-3). cpp set to manually installed. autopoint is already the newest version (1.0-3). autopoint set to manually installed. libuchardet0 is already the newest version (0.0.8-2+b2). libuchardet0 set to manually installed. libmagic-mgc is already the newest version (1:5.47-4). libmagic-mgc set to manually installed. cpp-16-x86-64-linux-gnu is already the newest version (16.1.0-3). cpp-16-x86-64-linux-gnu set to manually installed. xfonts-encodings is already the newest version (1:1.0.4-2.2). xfonts-encodings set to manually installed. libsframe3 is already the newest version (2.47-2). libsframe3 set to manually installed. r-bioc-seqinfo is already the newest version (1.2.0+dfsg-1). r-bioc-seqinfo set to manually installed. xdg-utils is already the newest version (1.2.1-2). xdg-utils set to manually installed. libclass-c3-perl is already the newest version (0.35-2). libclass-c3-perl set to manually installed. gfortran-16 is already the newest version (16.1.0-3). gfortran-16 set to manually installed. libpackage-stash-perl is already the newest version (0.40-1). libpackage-stash-perl set to manually installed. libstdc++-15-dev is already the newest version (15.3.0-2). libstdc++-15-dev set to manually installed. r-cran-generics is already the newest version (0.1.4-1). r-cran-generics set to manually installed. libwww-curl-simple-perl is already the newest version (0.100191-3). libwww-curl-simple-perl set to manually installed. libtinfo6 is already the newest version (6.6+20260608-2). fonts-dejavu-mono is already the newest version (2.37-9). fonts-dejavu-mono set to manually installed. libngtcp2-crypto-gnutls8 is already the newest version (1.24.0-1). libngtcp2-crypto-gnutls8 set to manually installed. libngtcp2-16 is already the newest version (1.24.0-1). libngtcp2-16 set to manually installed. r-cran-codetools is already the newest version (0.2-20-1). r-cran-codetools set to manually installed. libopenblas-pthread-dev is already the newest version (0.3.30+ds-3). libopenblas-pthread-dev set to manually installed. coreutils is already the newest version (9.10-1). libpangocairo-1.0-0 is already the newest version (1.58.0-1). libpangocairo-1.0-0 set to manually installed. gcc-15-x86-64-linux-gnu is already the newest version (15.3.0-2). gcc-15-x86-64-linux-gnu set to manually installed. cpp-16 is already the newest version (16.1.0-3). cpp-16 set to manually installed. dash is already the newest version (0.5.12-12). libpipeline1 is already the newest version (1.5.8-3). libpipeline1 set to manually installed. libdb5.3t64 is already the newest version (5.3.28+dfsg2-11+b1). sysvinit-utils is already the newest version (3.18-1). libpackage-stash-xs-perl is already the newest version (0.30-1+b6). libpackage-stash-xs-perl set to manually installed. xfonts-utils is already the newest version (1:7.7+7). xfonts-utils set to manually installed. libsub-name-perl is already the newest version (0.28-1+b3). libsub-name-perl set to manually installed. base-files is already the newest version (14.2). procps is already the newest version (2:4.0.6-3). procps set to manually installed. libdevel-overloadinfo-perl is already the newest version (0.008-1). libdevel-overloadinfo-perl set to manually installed. rpcsvc-proto is already the newest version (1.4.4-1). rpcsvc-proto set to manually installed. perl-modules-5.42 is already the newest version (5.42.2-3). perl-modules-5.42 set to manually installed. libbrotli1 is already the newest version (1.2.0-3). libbrotli1 set to manually installed. linux-libc-dev is already the newest version (7.1.6-1). linux-libc-dev set to manually installed. unzip is already the newest version (6.0-30). unzip set to manually installed. libpam-modules-bin is already the newest version (1.7.0-8). libnghttp2-14 is already the newest version (1.70.0-1). libnghttp2-14 set to manually installed. libpaper2 is already the newest version (2.2.5-0.4). libpaper2 set to manually installed. libtsan2 is already the newest version (16.1.0-3). libtsan2 set to manually installed. libsharpyuv0 is already the newest version (1.5.0-0.1+b2). libsharpyuv0 set to manually installed. libpng16-16t64 is already the newest version (1.6.58-1). libpng16-16t64 set to manually installed. libncursesw6 is already the newest version (6.6+20260608-2). libncursesw6 set to manually installed. dh-r is already the newest version (20260707). dh-r set to manually installed. libdist-checkconflicts-perl is already the newest version (0.11-2). libdist-checkconflicts-perl set to manually installed. r-cran-jsonlite is already the newest version (2.0.0+dfsg-2). r-cran-jsonlite set to manually installed. libkrb5-3 is already the newest version (1.22.1-3). libkrb5-3 set to manually installed. r-cran-formatr is already the newest version (1.14-2). r-cran-formatr set to manually installed. libcurl4-gnutls is already the newest version (8.21.0-2). libcurl4-gnutls set to manually installed. libc-bin is already the newest version (2.42-16). r-cran-lambda.r is already the newest version (1.2.4-2). r-cran-lambda.r set to manually installed. gfortran-16-x86-64-linux-gnu is already the newest version (16.1.0-3). gfortran-16-x86-64-linux-gnu set to manually installed. libpcre2-16-0 is already the newest version (10.46-1+b2). libpcre2-16-0 set to manually installed. r-cran-bitops is already the newest version (1.0-9-3). r-cran-bitops set to manually installed. readline-common is already the newest version (8.3-4). readline-common set to manually installed. libtool is already the newest version (2.5.4-11). libtool set to manually installed. libldap2 is already the newest version (2.6.13+dfsg-1+b1). libldap2 set to manually installed. libcurl4-openssl-dev is already the newest version (8.21.0-2). libcurl4-openssl-dev set to manually installed. fonts-freefont-otf is already the newest version (20211204+svn4273-4). fonts-freefont-otf set to manually installed. libtcl8.6 is already the newest version (8.6.18+dfsg-1). libtcl8.6 set to manually installed. dpkg is already the newest version (1.23.7). findutils is already the newest version (4.10.0-4). dwz is already the newest version (0.17-1). dwz set to manually installed. libldap-dev is already the newest version (2.6.13+dfsg-1+b1). libldap-dev set to manually installed. libpam0g is already the newest version (1.7.0-8). pkgconf-bin is already the newest version (2.5.1-4). pkgconf-bin set to manually installed. libjbig0 is already the newest version (2.1-6.1+b3). libjbig0 set to manually installed. libtimedate-perl is already the newest version (2.3500-1). libtimedate-perl set to manually installed. grep is already the newest version (3.12-1). libxt6t64 is already the newest version (1:1.2.1-1.3+b2). libxt6t64 set to manually installed. libtasn1-6 is already the newest version (4.21.0-2+b1). libtasn1-6 set to manually installed. libgmpxx4ldbl is already the newest version (2:6.3.0+dfsg-5+b2). libgmpxx4ldbl set to manually installed. libswitch-perl is already the newest version (2.17-3). libswitch-perl set to manually installed. gcc is already the newest version (4:16.1.0-3). gcc set to manually installed. libpangoft2-1.0-0 is already the newest version (1.58.0-1). libpangoft2-1.0-0 set to manually installed. libgdbm6t64 is already the newest version (1.26-1+b2). libgdbm6t64 set to manually installed. r-base-core is already the newest version (4.6.1-1). r-base-core set to manually installed. tar is already the newest version (1.35+dfsg-4). libtirpc3t64 is already the newest version (1.3.7+ds-1). libtirpc3t64 set to manually installed. libattr1 is already the newest version (1:2.6.0-1). libclang-cpp21 is already the newest version (1:21.1.8-10). libclang-cpp21 set to manually installed. libb-hooks-endofscope-perl is already the newest version (0.28-2). libb-hooks-endofscope-perl set to manually installed. libgmp10 is already the newest version (2:6.3.0+dfsg-5+b2). libhttp-date-perl is already the newest version (6.08-1). libhttp-date-perl set to manually installed. zip is already the newest version (3.0-15). zip set to manually installed. libgnutls-dane0t64 is already the newest version (3.8.13-1). libgnutls-dane0t64 set to manually installed. libtasn1-6-dev is already the newest version (4.21.0-2+b1). libtasn1-6-dev set to manually installed. diffutils is already the newest version (1:3.12-1). libx11-data is already the newest version (2:1.8.13-1). libx11-data set to manually installed. libsystemd0 is already the newest version (261.2-1). zlib1g is already the newest version (1:1.3.dfsg+really1.3.2-3). libxmuu1 is already the newest version (2:1.1.3-4+b1). libxmuu1 set to manually installed. libwww-curl-perl is already the newest version (4.17-13+b2). libwww-curl-perl set to manually installed. ncurses-base is already the newest version (6.6+20260608-2). libzstd-dev is already the newest version (1.5.7+dfsg-4). libzstd-dev set to manually installed. r-cran-futile.logger is already the newest version (1.4.3-4). r-cran-futile.logger set to manually installed. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: running --customize-hook in shell: sh -c 'chroot "$1" dpkg -r debootsnap-dummy' exec /srv/rebuilderd/tmp/mmdebstrap.fALp55HyIF (Reading database ... 43303 files and directories currently installed.) Removing debootsnap-dummy (1.0) ... I: running --customize-hook in shell: sh -c 'chroot "$1" dpkg-query --showformat '${binary:Package}=${Version}\n' --show > "$1/pkglist"' exec /srv/rebuilderd/tmp/mmdebstrap.fALp55HyIF I: running special hook: download /pkglist ./pkglist I: running --customize-hook in shell: sh -c 'rm "$1/pkglist"' exec /srv/rebuilderd/tmp/mmdebstrap.fALp55HyIF I: running special hook: upload sources.list /etc/apt/sources.list I: waiting for background processes to finish... I: cleaning package lists and apt cache... I: skipping cleanup/reproducible as requested I: creating tarball... I: done I: removing tempdir /srv/rebuilderd/tmp/mmdebstrap.fALp55HyIF... I: success in 140.7171 seconds Downloading dependency 385 of 408: libswitch-perl:amd64=2.17-3 Downloading dependency 386 of 408: gcc:amd64=4:16.1.0-3 Downloading dependency 387 of 408: libpangoft2-1.0-0:amd64=1.58.0-1 Downloading dependency 388 of 408: libgdbm6t64:amd64=1.26-1+b2 Downloading dependency 389 of 408: r-base-core:amd64=4.6.1-1 Downloading dependency 390 of 408: tar:amd64=1.35+dfsg-4 Downloading dependency 391 of 408: libtirpc3t64:amd64=1.3.7+ds-1 Downloading dependency 392 of 408: libattr1:amd64=1:2.6.0-1 Downloading dependency 393 of 408: libclang-cpp21:amd64=1:21.1.8-10 Downloading dependency 394 of 408: libb-hooks-endofscope-perl:amd64=0.28-2 Downloading dependency 395 of 408: libgmp10:amd64=2:6.3.0+dfsg-5+b2 Downloading dependency 396 of 408: libhttp-date-perl:amd64=6.08-1 Downloading dependency 397 of 408: zip:amd64=3.0-15 Downloading dependency 398 of 408: libgnutls-dane0t64:amd64=3.8.13-1 Downloading dependency 399 of 408: libtasn1-6-dev:amd64=4.21.0-2+b1 Downloading dependency 400 of 408: diffutils:amd64=1:3.12-1 Downloading dependency 401 of 408: libx11-data:amd64=2:1.8.13-1 Downloading dependency 402 of 408: libsystemd0:amd64=261.2-1 Downloading dependency 403 of 408: zlib1g:amd64=1:1.3.dfsg+really1.3.2-3 Downloading dependency 404 of 408: libxmuu1:amd64=2:1.1.3-4+b1 Downloading dependency 405 of 408: libwww-curl-perl:amd64=4.17-13+b2 Downloading dependency 406 of 408: ncurses-base:amd64=6.6+20260608-2 Downloading dependency 407 of 408: libzstd-dev:amd64=1.5.7+dfsg-4 Downloading dependency 408 of 408: r-cran-futile.logger:amd64=1.4.3-4 env --chdir=/srv/rebuilderd/tmp/rebuilderd5TUQ7L/out DEB_BUILD_OPTIONS=parallel=4 LANG=de_DE.UTF-8 SOURCE_DATE_EPOCH=1785849774 SBUILD_CONFIG=/srv/rebuilderd/tmp/debrebuildILkubu/debrebuild.sbuildrc.KRBa6_Ei2l_l sbuild --build=amd64 --host=amd64 --arch-any --no-arch-all --chroot=/srv/rebuilderd/tmp/debrebuildILkubu/debrebuild.tar.Zk8dWIssbd5H --chroot-mode=unshare --dist=unstable --no-run-lintian --no-run-piuparts --no-run-autopkgtest --no-apt-update --no-apt-upgrade --no-apt-distupgrade --no-source --verbose --nolog --bd-uninstallable-explainer= /srv/rebuilderd/tmp/rebuilderd5TUQ7L/inputs/r-bioc-rsamtools_2.28.0+dfsg-1.dsc I: consider moving your ~/.sbuildrc to /srv/rebuilderd/.config/sbuild/config.pl The Debian buildds switched to the "unshare" backend and sbuild will default to it in the future. To start using "unshare" add this to your `~/.config/sbuild/config.pl`: $chroot_mode = "unshare"; If you want to keep the old "schroot" mode even in the future, add the following to your `~/.config/sbuild/config.pl`: $chroot_mode = "schroot"; $schroot = "schroot"; sbuild (Debian sbuild) 0.89.3+deb13u4 (28 December 2025) on osuosl44-amd64.novalocal +==============================================================================+ | r-bioc-rsamtools 2.28.0+dfsg-1 (amd64) Tue, 04 Aug 2026 16:24:40 +0000 | +==============================================================================+ Package: r-bioc-rsamtools Version: 2.28.0+dfsg-1 Source Version: 2.28.0+dfsg-1 Distribution: unstable Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 Build Type: any I: No tarballs found in /srv/rebuilderd/.cache/sbuild I: Unpacking /srv/rebuilderd/tmp/debrebuildILkubu/debrebuild.tar.Zk8dWIssbd5H to /srv/rebuilderd/tmp/tmp.sbuild.IA90iVxw_2... I: Setting up the chroot... I: Creating chroot session... I: Setting up log color... I: Setting up apt archive... +------------------------------------------------------------------------------+ | Fetch source files Tue, 04 Aug 2026 16:24:47 +0000 | +------------------------------------------------------------------------------+ Local sources ------------- /srv/rebuilderd/tmp/rebuilderd5TUQ7L/inputs/r-bioc-rsamtools_2.28.0+dfsg-1.dsc exists in /srv/rebuilderd/tmp/rebuilderd5TUQ7L/inputs; copying to chroot +------------------------------------------------------------------------------+ | Install package build dependencies Tue, 04 Aug 2026 16:24:48 +0000 | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 14), dh-r, r-base-dev, r-bioc-seqinfo, r-bioc-genomicranges (>= 1.61.1), r-bioc-biostrings (>= 2.77.2), r-bioc-biocgenerics, r-bioc-s4vectors, r-bioc-iranges, r-bioc-xvector, r-cran-bitops, r-bioc-biocparallel, r-bioc-rhtslib (>= 3.3.1), r-bioc-genomeinfodb, libcurl4-openssl-dev, r-pkg-team-core-architecture, build-essential Filtered Build-Depends: debhelper-compat (= 14), dh-r, r-base-dev, r-bioc-seqinfo, r-bioc-genomicranges (>= 1.61.1), r-bioc-biostrings (>= 2.77.2), r-bioc-biocgenerics, r-bioc-s4vectors, r-bioc-iranges, r-bioc-xvector, r-cran-bitops, r-bioc-biocparallel, r-bioc-rhtslib (>= 3.3.1), r-bioc-genomeinfodb, libcurl4-openssl-dev, r-pkg-team-core-architecture, build-essential dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/build/reproducible-path/resolver-iOXteT/apt_archive/sbuild-build-depends-main-dummy.deb'. Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies +------------------------------------------------------------------------------+ | Check architectures Tue, 04 Aug 2026 16:24:51 +0000 | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in any) +------------------------------------------------------------------------------+ | Build environment Tue, 04 Aug 2026 16:24:51 +0000 | +------------------------------------------------------------------------------+ Kernel: Linux 6.12.100+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.100-1 (2026-07-30) amd64 (x86_64) Toolchain package versions: binutils_2.47-2 dpkg-dev_1.23.7 g++-16_16.1.0-3 gcc-15_15.3.0-2 gcc-16_16.1.0-3 libc6-dev_2.42-17 libstdc++-15-dev_15.3.0-2 libstdc++-16-dev_16.1.0-3 libstdc++6_16.1.0-3 linux-libc-dev_7.1.6-1 Package versions: autoconf_2.73-2 automake_1:1.18.1-4 autopoint_1.0-3 autotools-dev_20240727.1+nmu1 base-files_14.2 base-passwd_3.6.8 bash_5.3-3 binutils_2.47-2 binutils-common_2.47-2 binutils-x86-64-linux-gnu_2.47-2 bsdextrautils_2.42.2-2 build-essential_12.12 bzip2_1.0.8-6+b2 ca-certificates_20260601 clang-21_1:21.1.8-10 comerr-dev_2.1-1.47.4-1 coreutils_9.10-1 cpp_4:16.1.0-3 cpp-15_15.3.0-2 cpp-15-x86-64-linux-gnu_15.3.0-2 cpp-16_16.1.0-3 cpp-16-x86-64-linux-gnu_16.1.0-3 cpp-x86-64-linux-gnu_4:16.1.0-3 dash_0.5.12-12 dctrl-tools_2.24-3+b1 debconf_1.5.92 debhelper_14.3 debianutils_5.23.2 dh-autoreconf_22 dh-r_20260707 dh-strip-nondeterminism_1.15.1-1 diffutils_1:3.12-1 dpkg_1.23.7 dpkg-dev_1.23.7 dwz_0.17-1 file_1:5.47-4 findutils_4.10.0-4 fontconfig_2.17.1-5 fontconfig-config_2.17.1-5 fonts-croscore_20201225-6 fonts-dejavu-core_2.37-9 fonts-dejavu-mono_2.37-9 fonts-freefont-otf_20211204+svn4273-4 fonts-freefont-ttf_20211204+svn4273-4 fonts-liberation_1:2.1.5-3 fonts-noto-core_20201225-6 fonts-noto-mono_20201225-6 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Source: r-bioc-rsamtools Binary: r-bioc-rsamtools Architecture: any Version: 2.28.0+dfsg-1 Maintainer: Debian R Packages Maintainers Uploaders: Andreas Tille Homepage: https://bioconductor.org/packages/Rsamtools/ Standards-Version: 4.7.4 Vcs-Browser: https://salsa.debian.org/r-pkg-team/r-bioc-rsamtools Vcs-Git: https://salsa.debian.org/r-pkg-team/r-bioc-rsamtools.git Testsuite: autopkgtest-pkg-r Build-Depends: debhelper-compat (= 14), dh-r, r-base-dev, r-bioc-seqinfo, r-bioc-genomicranges (>= 1.61.1), r-bioc-biostrings (>= 2.77.2), r-bioc-biocgenerics, r-bioc-s4vectors, r-bioc-iranges, r-bioc-xvector, r-cran-bitops, r-bioc-biocparallel, r-bioc-rhtslib (>= 3.3.1), r-bioc-genomeinfodb, libcurl4-openssl-dev, r-pkg-team-core-architecture Package-List: r-bioc-rsamtools deb gnu-r optional arch=any Checksums-Sha1: 08b33ea3f09dce1620e7a8ced682b9d136e15a9f 1470804 r-bioc-rsamtools_2.28.0+dfsg.orig.tar.xz 3803074407eed1b3c6b3fd3c7b5a57053468db98 7344 r-bioc-rsamtools_2.28.0+dfsg-1.debian.tar.xz 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unpacking r-bioc-rsamtools_2.28.0+dfsg-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying skip_test_requiring_network.patch dpkg-source: info: applying ro_usr_lib.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=de_DE.UTF-8 LC_ALL=C.UTF-8 LOGNAME=sbuild PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SHELL=/bin/sh SOURCE_DATE_EPOCH=1785849774 USER=sbuild dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -us -uc -B dpkg-buildpackage: info: source package r-bioc-rsamtools dpkg-buildpackage: info: source version 2.28.0+dfsg-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Steffen Moeller dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --buildsystem R dh: warning: Implicitly activating single-binary dh addon for backwards compatibility. In compat 14+, dh: warning: this fallback will *not* happen automatically via dh_auto_install will instead use a dh: warning: different default for --destdir unless the single-binary add-on is active, dh: warning: which can cause the source to produce an empty binary package dh: warning: dh: warning: To keep the existing behaviour (compat 13), please activate the single-binary addon explicitly. dh: warning: This can be done by adding "dh-sequence-single-binary" to Build-Depends or passing dh: warning: --with=single-binary to dh. dh: warning: dh: warning: If you have solved this issue differently (e.g., by passing --destdir explicitly to dh: warning: dh_auto_install or not using dh_auto_install at all) and want to silence this warning dh: warning: without activating the addon, you can do that by passing --without=single-binary to dh dh: warning: to explicitly acknowledge the change. dh: warning: dh: warning: Please see the description of the "single-binary" in "man dh" for more details of what dh: warning: it does and why this is changing from implicit behaviour to explicitly opt-in. dh_auto_clean -O--buildsystem=R dh_autoreconf_clean -O--buildsystem=R dh_clean -O--buildsystem=R debian/rules binary-arch dh binary-arch --buildsystem R dh: warning: Implicitly activating single-binary dh addon for backwards compatibility. In compat 14+, dh: warning: this fallback will *not* happen automatically via dh_auto_install will instead use a dh: warning: different default for --destdir unless the single-binary add-on is active, dh: warning: which can cause the source to produce an empty binary package dh: warning: dh: warning: To keep the existing behaviour (compat 13), please activate the single-binary addon explicitly. dh: warning: This can be done by adding "dh-sequence-single-binary" to Build-Depends or passing dh: warning: --with=single-binary to dh. dh: warning: dh: warning: If you have solved this issue differently (e.g., by passing --destdir explicitly to dh: warning: dh_auto_install or not using dh_auto_install at all) and want to silence this warning dh: warning: without activating the addon, you can do that by passing --without=single-binary to dh dh: warning: to explicitly acknowledge the change. dh: warning: dh: warning: Please see the description of the "single-binary" in "man dh" for more details of what dh: warning: it does and why this is changing from implicit behaviour to explicitly opt-in. dh_update_autotools_config -a -O--buildsystem=R dh_autoreconf -a -O--buildsystem=R dh_auto_configure -a -O--buildsystem=R dh_auto_build -a -O--buildsystem=R dh_auto_test -a -O--buildsystem=R create-stamp debian/debhelper-build-stamp dh_testroot -a -O--buildsystem=R dh_prep -a -O--buildsystem=R dh_auto_install --destdir=debian/r-bioc-rsamtools/ -a -O--buildsystem=R I: R Package: Rsamtools Version: 2.28.0 I: Building using R version 4.6.1-1 I: R API version: r-api-4.0 I: Using built-time from d/changelog: Tue, 04 Aug 2026 15:22:54 +0200 mkdir -p /build/reproducible-path/r-bioc-rsamtools-2.28.0\+dfsg/debian/r-bioc-rsamtools/usr/lib/R/site-library R CMD INSTALL -l /build/reproducible-path/r-bioc-rsamtools-2.28.0\+dfsg/debian/r-bioc-rsamtools/usr/lib/R/site-library --clean . --built-timestamp="'Tue, 04 Aug 2026 15:22:54 +0200'" * installing *source* package ‘Rsamtools’ ... ** this is package ‘Rsamtools’ version ‘2.28.0’ ** using staged installation ** libs using C compiler: ‘x86_64-linux-gnu-gcc (Debian 16.1.0-3) 16.1.0’ using C++ compiler: ‘x86_64-linux-gnu-g++ (Debian 16.1.0-3) 16.1.0’ make[1]: Entering directory '/build/reproducible-path/r-bioc-rsamtools-2.28.0+dfsg/src' x86_64-linux-gnu-gcc -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 -I'/usr/lib/R/site-library/Rhtslib/include' -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include' -I'/usr/lib/R/site-library/Biostrings/include' -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.6.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -c Biostrings_stubs.c -o Biostrings_stubs.o x86_64-linux-gnu-gcc -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 -I'/usr/lib/R/site-library/Rhtslib/include' -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include' -I'/usr/lib/R/site-library/Biostrings/include' -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.6.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -c COMPAT_bcf_hdr_read.c -o COMPAT_bcf_hdr_read.o x86_64-linux-gnu-gcc -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 -I'/usr/lib/R/site-library/Rhtslib/include' -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include' -I'/usr/lib/R/site-library/Biostrings/include' -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.6.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -c IRanges_stubs.c -o IRanges_stubs.o x86_64-linux-gnu-g++ -std=gnu++20 -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 -I'/usr/lib/R/site-library/Rhtslib/include' -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include' -I'/usr/lib/R/site-library/Biostrings/include' -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.6.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -c PileupBuffer.cpp -o PileupBuffer.o x86_64-linux-gnu-g++ -std=gnu++20 -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 -I'/usr/lib/R/site-library/Rhtslib/include' -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include' -I'/usr/lib/R/site-library/Biostrings/include' -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.6.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -c PosCacheColl.cpp -o PosCacheColl.o x86_64-linux-gnu-gcc -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 -I'/usr/lib/R/site-library/Rhtslib/include' -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include' -I'/usr/lib/R/site-library/Biostrings/include' -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.6.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -c R_init_Rsamtools.c -o R_init_Rsamtools.o x86_64-linux-gnu-g++ -std=gnu++20 -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 -I'/usr/lib/R/site-library/Rhtslib/include' -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include' -I'/usr/lib/R/site-library/Biostrings/include' -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.6.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -c ResultManager.cpp -o ResultManager.o x86_64-linux-gnu-gcc -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 -I'/usr/lib/R/site-library/Rhtslib/include' -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include' -I'/usr/lib/R/site-library/Biostrings/include' -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.6.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -c S4Vectors_stubs.c -o S4Vectors_stubs.o x86_64-linux-gnu-gcc -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 -I'/usr/lib/R/site-library/Rhtslib/include' -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include' -I'/usr/lib/R/site-library/Biostrings/include' -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.6.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -c XVector_stubs.c -o XVector_stubs.o x86_64-linux-gnu-gcc -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 -I'/usr/lib/R/site-library/Rhtslib/include' -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include' -I'/usr/lib/R/site-library/Biostrings/include' -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.6.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -c as_bam.c -o as_bam.o x86_64-linux-gnu-gcc -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 -I'/usr/lib/R/site-library/Rhtslib/include' -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include' -I'/usr/lib/R/site-library/Biostrings/include' -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.6.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -c bam.c -o bam.o x86_64-linux-gnu-gcc -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 -I'/usr/lib/R/site-library/Rhtslib/include' -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include' -I'/usr/lib/R/site-library/Biostrings/include' -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.6.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -c bam_data.c -o bam_data.o x86_64-linux-gnu-g++ -std=gnu++20 -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 -I'/usr/lib/R/site-library/Rhtslib/include' -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include' -I'/usr/lib/R/site-library/Biostrings/include' -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.6.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -c bam_mate_iter.cpp -o bam_mate_iter.o In file included from Template.h:9, from BamIterator.h:10, from BamRangeIterator.h:7, from bam_mate_iter.cpp:1: BamRangeIterator.h: In member function ‘virtual void BamRangeIterator::finalize_inprogress(bamFile)’: /usr/lib/R/site-library/Rhtslib/include/samtools-1.7-compat.h:14:41: warning: ignoring return value of ‘int64_t bgzf_seek(BGZF*, int64_t, int)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 14 | #define bam_seek(fp, pos, dir) bgzf_seek(fp, pos, dir) | ~~~~~~~~~^~~~~~~~~~~~~~ BamRangeIterator.h:138:16: note: in expansion of macro ‘bam_seek’ 138 | (void) bam_seek(bfile, pos, SEEK_SET); | ^~~~~~~~ BamIterator.h: In constructor ‘BamIterator::BamIterator(bamFile, const bam_index_t*)’: /usr/lib/R/site-library/Rhtslib/include/samtools-1.7-compat.h:14:41: warning: ignoring return value of ‘int64_t bgzf_seek(BGZF*, int64_t, int)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 14 | #define bam_seek(fp, pos, dir) bgzf_seek(fp, pos, dir) | ~~~~~~~~~^~~~~~~~~~~~~~ BamIterator.h:87:16: note: in expansion of macro ‘bam_seek’ 87 | (void) bam_seek(bfile, 0, 0); | ^~~~~~~~ x86_64-linux-gnu-gcc -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 -I'/usr/lib/R/site-library/Rhtslib/include' -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include' -I'/usr/lib/R/site-library/Biostrings/include' -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.6.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -c bam_plbuf.c -o bam_plbuf.o x86_64-linux-gnu-gcc -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 -I'/usr/lib/R/site-library/Rhtslib/include' -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include' -I'/usr/lib/R/site-library/Biostrings/include' -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.6.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -c bam_sort.c -o bam_sort.o x86_64-linux-gnu-gcc -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 -I'/usr/lib/R/site-library/Rhtslib/include' -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include' -I'/usr/lib/R/site-library/Biostrings/include' -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.6.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -c bambuffer.c -o bambuffer.o x86_64-linux-gnu-gcc -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 -I'/usr/lib/R/site-library/Rhtslib/include' -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include' -I'/usr/lib/R/site-library/Biostrings/include' -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.6.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -c bamfile.c -o bamfile.o bamfile.c: In function ‘bamfile_isincomplete’: bamfile.c:168:20: warning: ignoring return value of ‘bgzf_seek’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 168 | (void) bgzf_seek(bfile->file->x.bam, offset, SEEK_SET); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ x86_64-linux-gnu-gcc -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 -I'/usr/lib/R/site-library/Rhtslib/include' -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include' -I'/usr/lib/R/site-library/Biostrings/include' -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.6.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -c bcffile.c -o bcffile.o x86_64-linux-gnu-gcc -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 -I'/usr/lib/R/site-library/Rhtslib/include' -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include' -I'/usr/lib/R/site-library/Biostrings/include' -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.6.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -c bedidx.c -o bedidx.o x86_64-linux-gnu-gcc -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 -I'/usr/lib/R/site-library/Rhtslib/include' -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include' -I'/usr/lib/R/site-library/Biostrings/include' -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.6.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -c encode.c -o encode.o x86_64-linux-gnu-gcc -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 -I'/usr/lib/R/site-library/Rhtslib/include' -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include' -I'/usr/lib/R/site-library/Biostrings/include' -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.6.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -c fafile.c -o fafile.o x86_64-linux-gnu-gcc -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 -I'/usr/lib/R/site-library/Rhtslib/include' -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include' -I'/usr/lib/R/site-library/Biostrings/include' -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.6.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -c idxstats.c -o idxstats.o In file included from bamfile.h:5, from idxstats.c:1: idxstats.c: In function ‘idxstats_bamfile’: /usr/lib/R/site-library/Rhtslib/include/samtools-1.7-compat.h:14:32: warning: ignoring return value of ‘bgzf_seek’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 14 | #define bam_seek(fp, pos, dir) bgzf_seek(fp, pos, dir) | ^~~~~~~~~~~~~~~~~~~~~~~ idxstats.c:20:12: note: in expansion of macro ‘bam_seek’ 20 | (void) bam_seek(fp, 0, 0); | ^~~~~~~~ x86_64-linux-gnu-gcc -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 -I'/usr/lib/R/site-library/Rhtslib/include' -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include' -I'/usr/lib/R/site-library/Biostrings/include' -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.6.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -c io_sam.c -o io_sam.o In file included from io_sam.c:3: io_sam.c: In function ‘_scan_bam_all’: /usr/lib/R/site-library/Rhtslib/include/samtools-1.7-compat.h:14:32: warning: ignoring return value of ‘bgzf_seek’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 14 | #define bam_seek(fp, pos, dir) bgzf_seek(fp, pos, dir) | ^~~~~~~~~~~~~~~~~~~~~~~ io_sam.c:302:12: note: in expansion of macro ‘bam_seek’ 302 | (void) bam_seek(bfile->file->x.bam, bfile->pos0, SEEK_SET); | ^~~~~~~~ x86_64-linux-gnu-g++ -std=gnu++20 -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 -I'/usr/lib/R/site-library/Rhtslib/include' -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include' -I'/usr/lib/R/site-library/Biostrings/include' -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.6.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -c pbuffer_wrapper.cpp -o pbuffer_wrapper.o x86_64-linux-gnu-g++ -std=gnu++20 -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 -I'/usr/lib/R/site-library/Rhtslib/include' -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include' -I'/usr/lib/R/site-library/Biostrings/include' -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.6.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -c pileup.cpp -o pileup.o x86_64-linux-gnu-gcc -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 -I'/usr/lib/R/site-library/Rhtslib/include' -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include' -I'/usr/lib/R/site-library/Biostrings/include' -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.6.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -c pileupbam.c -o pileupbam.o x86_64-linux-gnu-gcc -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 -I'/usr/lib/R/site-library/Rhtslib/include' -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include' -I'/usr/lib/R/site-library/Biostrings/include' -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.6.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -c sam_opts.c -o sam_opts.o x86_64-linux-gnu-gcc -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 -I'/usr/lib/R/site-library/Rhtslib/include' -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include' -I'/usr/lib/R/site-library/Biostrings/include' -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.6.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -c sam_utils.c -o sam_utils.o x86_64-linux-gnu-gcc -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 -I'/usr/lib/R/site-library/Rhtslib/include' -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include' -I'/usr/lib/R/site-library/Biostrings/include' -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.6.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -c samtools_patch.c -o samtools_patch.o x86_64-linux-gnu-gcc -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 -I'/usr/lib/R/site-library/Rhtslib/include' -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include' -I'/usr/lib/R/site-library/Biostrings/include' -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.6.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -c scan_bam_data.c -o scan_bam_data.o x86_64-linux-gnu-gcc -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 -I'/usr/lib/R/site-library/Rhtslib/include' -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include' -I'/usr/lib/R/site-library/Biostrings/include' -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.6.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -c tabixfile.c -o tabixfile.o x86_64-linux-gnu-gcc -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 -I'/usr/lib/R/site-library/Rhtslib/include' -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include' -I'/usr/lib/R/site-library/Biostrings/include' -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.6.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -c tagfilter.c -o tagfilter.o x86_64-linux-gnu-gcc -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 -I'/usr/lib/R/site-library/Rhtslib/include' -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include' -I'/usr/lib/R/site-library/Biostrings/include' -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.6.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -c utilities.c -o utilities.o x86_64-linux-gnu-gcc -I"/usr/share/R/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 -I'/usr/lib/R/site-library/Rhtslib/include' -I'/usr/lib/R/site-library/S4Vectors/include' -I'/usr/lib/R/site-library/IRanges/include' -I'/usr/lib/R/site-library/XVector/include' -I'/usr/lib/R/site-library/Biostrings/include' -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.6.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -c zip_compression.c -o zip_compression.o x86_64-linux-gnu-g++ -std=gnu++20 -shared -L/usr/lib/R/lib -Wl,-z,relro -o Rsamtools.so Biostrings_stubs.o COMPAT_bcf_hdr_read.o IRanges_stubs.o PileupBuffer.o PosCacheColl.o R_init_Rsamtools.o ResultManager.o S4Vectors_stubs.o XVector_stubs.o as_bam.o bam.o bam_data.o bam_mate_iter.o bam_plbuf.o bam_sort.o bambuffer.o bamfile.o bcffile.o bedidx.o encode.o fafile.o idxstats.o io_sam.o pbuffer_wrapper.o pileup.o pileupbam.o sam_opts.o sam_utils.o samtools_patch.o scan_bam_data.o tabixfile.o tagfilter.o utilities.o zip_compression.o /usr/lib/R/site-library/Rhtslib/usrlib/libhts.a -lcurl -lbz2 -llzma -lz -L/usr/lib/R/lib -lR make[1]: Leaving directory '/build/reproducible-path/r-bioc-rsamtools-2.28.0+dfsg/src' make[1]: Entering directory '/build/reproducible-path/r-bioc-rsamtools-2.28.0+dfsg/src' make[1]: Leaving directory '/build/reproducible-path/r-bioc-rsamtools-2.28.0+dfsg/src' installing to /build/reproducible-path/r-bioc-rsamtools-2.28.0+dfsg/debian/r-bioc-rsamtools/usr/lib/R/site-library/00LOCK-r-bioc-rsamtools-2.28.0+dfsg/00new/Rsamtools/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Rsamtools) rm -f /build/reproducible-path/r-bioc-rsamtools-2.28.0\+dfsg/debian/r-bioc-rsamtools/usr/lib/R/site-library/Rsamtools/LICENSE /bin/sh: 1: apt-cache: not found grep-aptavail: command (apt-cache dumpavail) failed (exit status 127) W: Ignoring specified R dependency: R (>= 3.5.0) I: Using r-bioc-seqinfo for Depends:Seqinfo I: Using r-bioc-genomicranges for Depends:GenomicRanges (>= 1.61.1) I: Using r-bioc-biostrings for Depends:Biostrings (>= 2.77.2) W: Cannot find a debian package for Suggests:GenomicAlignments W: Cannot find a debian package for Suggests:ShortRead (>= 1.19.10) W: Cannot find a debian package for Suggests:GenomicFeatures W: Cannot find a debian package for Suggests:VariantAnnotation W: Cannot find a debian package for Suggests:TxDb.Dmelanogaster.UCSC.dm3.ensGene W: Cannot find a debian package for Suggests:TxDb.Hsapiens.UCSC.hg18.knownGene W: Cannot find a debian package for Suggests:RNAseqData.HNRNPC.bam.chr14 W: Cannot find a debian package for Suggests:BSgenome.Hsapiens.UCSC.hg19 W: Cannot find a debian package for Suggests:RUnit W: Cannot find a debian package for Suggests:BiocStyle W: Cannot find a debian package for Suggests:knitr I: Using r-bioc-biocgenerics for Imports:BiocGenerics (>= 0.25.1) I: Using r-bioc-s4vectors for Imports:S4Vectors (>= 0.17.25) I: Using r-bioc-iranges for Imports:IRanges (>= 2.13.12) I: Using r-bioc-xvector for Imports:XVector (>= 0.19.7) I: Using r-cran-bitops for Imports:bitops I: Using r-bioc-biocparallel for Imports:BiocParallel I: Using r-bioc-rhtslib for LinkingTo:Rhtslib (>= 3.3.1) I: Using r-bioc-s4vectors for LinkingTo:S4Vectors I: Using r-bioc-iranges for LinkingTo:IRanges I: Using r-bioc-xvector for LinkingTo:XVector I: Using r-bioc-biostrings for LinkingTo:Biostrings I: BioConductor API version: r-api-bioc-3.23 I: Use r-bioc-rsamtools as Debian binary package for variables substitution dh_installdocs -a -O--buildsystem=R dh_installchangelogs -a -O--buildsystem=R dh_installsystemduser -a -O--buildsystem=R dh_perl -a -O--buildsystem=R dh_link -a -O--buildsystem=R dh_missing -a -O--buildsystem=R dh_strip -a -O--buildsystem=R dh_makeshlibs -a -O--buildsystem=R dh_shlibdeps -a -O--buildsystem=R dh_fixperms -a -O--buildsystem=R dh_strip_nondeterminism -a -O--buildsystem=R dh_compress -a -O--buildsystem=R dh_installdeb -a -O--buildsystem=R dh_computeautosubstvars -a -O--buildsystem=R dh_gencontrol -a -O--buildsystem=R dpkg-gencontrol: warning: Depends field of package r-bioc-rsamtools: substitution variable ${misc:Depends} used, but is not defined dh_md5sums -a -O--buildsystem=R dh_builddeb -a -O--buildsystem=R dpkg-deb: building package 'r-bioc-rsamtools-dbgsym' in '../r-bioc-rsamtools-dbgsym_2.28.0+dfsg-1_amd64.deb'. dpkg-deb: building package 'r-bioc-rsamtools' in '../r-bioc-rsamtools_2.28.0+dfsg-1_amd64.deb'. dpkg-genbuildinfo --build=any -O../r-bioc-rsamtools_2.28.0+dfsg-1_amd64.buildinfo dpkg-genchanges --build=any -O../r-bioc-rsamtools_2.28.0+dfsg-1_amd64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2026-08-04T16:25:47Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes Tue, 04 Aug 2026 16:25:48 +0000 | +------------------------------------------------------------------------------+ r-bioc-rsamtools_2.28.0+dfsg-1_amd64.changes: --------------------------------------------- Format: 1.8 Date: Tue, 04 Aug 2026 15:22:54 +0200 Source: r-bioc-rsamtools Binary: r-bioc-rsamtools r-bioc-rsamtools-dbgsym Architecture: amd64 Version: 2.28.0+dfsg-1 Distribution: unstable Urgency: medium Maintainer: Debian R Packages Maintainers Changed-By: Steffen Moeller Description: r-bioc-rsamtools - GNU R binary alignment (BAM), variant call (BCF), or tabix file i Changes: r-bioc-rsamtools (2.28.0+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.7.4 (routine-update) * d/control: Removed dep on zlibbioc * Restrict to R packages team core architectures (routine-update) * Drop 'Rules-Requires-Root: no' from d/control (routine-update) Checksums-Sha1: 6fb9f5b9e778d169b2864b77fa7978f3155ac03a 1040584 r-bioc-rsamtools-dbgsym_2.28.0+dfsg-1_amd64.deb a0c4bc05ccc2cf96aec5fcf0253f7cad9f4045d6 13160 r-bioc-rsamtools_2.28.0+dfsg-1_amd64.buildinfo 47b8157d0dbc0aef9c4d12120ef6adf55fa2b154 2624896 r-bioc-rsamtools_2.28.0+dfsg-1_amd64.deb Checksums-Sha256: 2388ac16c27a913e87a29ea0b0bcafd88226c6271e6ca18962f5b64a0f365a3b 1040584 r-bioc-rsamtools-dbgsym_2.28.0+dfsg-1_amd64.deb c7ca31f84bbd13f74bf21f5be4096d2ca89ff5fcc0328858d0f107ca83bcdb89 13160 r-bioc-rsamtools_2.28.0+dfsg-1_amd64.buildinfo 5f92e6dd944ad36046fb5020576b669fe7275351cea57b1f23393b5bd7fe0152 2624896 r-bioc-rsamtools_2.28.0+dfsg-1_amd64.deb Files: fac83cf2f0d9947572ad36b7c5400cb9 1040584 debug optional r-bioc-rsamtools-dbgsym_2.28.0+dfsg-1_amd64.deb 4f0b812252329aada29ab4e6f00f8eb8 13160 gnu-r optional r-bioc-rsamtools_2.28.0+dfsg-1_amd64.buildinfo cf081df93b51914e66a1ce5422ec3998 2624896 gnu-r optional r-bioc-rsamtools_2.28.0+dfsg-1_amd64.deb +------------------------------------------------------------------------------+ | Buildinfo Tue, 04 Aug 2026 16:25:48 +0000 | +------------------------------------------------------------------------------+ Format: 1.0 Source: r-bioc-rsamtools Binary: r-bioc-rsamtools r-bioc-rsamtools-dbgsym Architecture: amd64 Version: 2.28.0+dfsg-1 Checksums-Md5: fac83cf2f0d9947572ad36b7c5400cb9 1040584 r-bioc-rsamtools-dbgsym_2.28.0+dfsg-1_amd64.deb cf081df93b51914e66a1ce5422ec3998 2624896 r-bioc-rsamtools_2.28.0+dfsg-1_amd64.deb Checksums-Sha1: 6fb9f5b9e778d169b2864b77fa7978f3155ac03a 1040584 r-bioc-rsamtools-dbgsym_2.28.0+dfsg-1_amd64.deb 47b8157d0dbc0aef9c4d12120ef6adf55fa2b154 2624896 r-bioc-rsamtools_2.28.0+dfsg-1_amd64.deb Checksums-Sha256: 2388ac16c27a913e87a29ea0b0bcafd88226c6271e6ca18962f5b64a0f365a3b 1040584 r-bioc-rsamtools-dbgsym_2.28.0+dfsg-1_amd64.deb 5f92e6dd944ad36046fb5020576b669fe7275351cea57b1f23393b5bd7fe0152 2624896 r-bioc-rsamtools_2.28.0+dfsg-1_amd64.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Tue, 04 Aug 2026 16:25:47 +0000 Build-Path: /build/reproducible-path/r-bioc-rsamtools-2.28.0+dfsg Installed-Build-Depends: autoconf (= 2.73-2), automake (= 1:1.18.1-4), autopoint (= 1.0-3), autotools-dev (= 20240727.1+nmu1), base-files (= 14.2), base-passwd (= 3.6.8), bash (= 5.3-3), binutils (= 2.47-2), binutils-common (= 2.47-2), binutils-x86-64-linux-gnu (= 2.47-2), bsdextrautils (= 2.42.2-2), build-essential (= 12.12), bzip2 (= 1.0.8-6+b2), ca-certificates (= 20260601), clang-21 (= 1:21.1.8-10), comerr-dev (= 2.1-1.47.4-1), coreutils (= 9.10-1), cpp (= 4:16.1.0-3), cpp-15 (= 15.3.0-2), cpp-15-x86-64-linux-gnu (= 15.3.0-2), cpp-16 (= 16.1.0-3), cpp-16-x86-64-linux-gnu (= 16.1.0-3), cpp-x86-64-linux-gnu (= 4:16.1.0-3), dash (= 0.5.12-12), dctrl-tools (= 2.24-3+b1), debconf (= 1.5.92), debhelper (= 14.3), debianutils (= 5.23.2), dh-autoreconf (= 22), dh-r (= 20260707), dh-strip-nondeterminism (= 1.15.1-1), diffutils (= 1:3.12-1), dpkg (= 1.23.7), dpkg-dev (= 1.23.7), dwz (= 0.17-1), file (= 1:5.47-4), findutils (= 4.10.0-4), fontconfig (= 2.17.1-5), fontconfig-config (= 2.17.1-5), fonts-croscore (= 20201225-6), fonts-dejavu-core (= 2.37-9), fonts-dejavu-mono (= 2.37-9), fonts-freefont-otf (= 20211204+svn4273-4), fonts-freefont-ttf (= 20211204+svn4273-4), fonts-liberation (= 1:2.1.5-3), fonts-noto-core (= 20201225-6), fonts-noto-mono (= 20201225-6), fonts-texgyre (= 20180621-7), fonts-urw-base35 (= 20200910-9), g++ (= 4:16.1.0-3), g++-16 (= 16.1.0-3), g++-16-x86-64-linux-gnu (= 16.1.0-3), g++-x86-64-linux-gnu (= 4:16.1.0-3), gawk (= 1:5.3.2-1), gcc (= 4:16.1.0-3), gcc-15 (= 15.3.0-2), gcc-15-base (= 15.3.0-2), gcc-15-x86-64-linux-gnu (= 15.3.0-2), gcc-16 (= 16.1.0-3), gcc-16-base (= 16.1.0-3), gcc-16-x86-64-linux-gnu (= 16.1.0-3), gcc-x86-64-linux-gnu (= 4:16.1.0-3), gettext (= 1.0-3), gettext-base (= 1.0-3), gfortran (= 4:16.1.0-3), gfortran-16 (= 16.1.0-3), gfortran-16-x86-64-linux-gnu (= 16.1.0-3), gfortran-x86-64-linux-gnu (= 4:16.1.0-3), grep (= 3.12-1), groff-base (= 1.24.1-1), gzip (= 1.13-1), hostname (= 3.25), icu-devtools (= 78.3-2), init-system-helpers (= 1.69), intltool-debian (= 0.35.0+20060710.6), krb5-multidev (= 1.22.1-3), libacl1 (= 2.4.0-1), libalgorithm-c3-perl (= 0.11-2), libarchive-zip-perl (= 1.68-1), libasan8 (= 16.1.0-3), libatomic1 (= 16.1.0-3), libattr1 (= 1:2.6.0-1), libaudit-common (= 1:4.1.2-1), libaudit1 (= 1:4.1.2-1+b1), libb-hooks-endofscope-perl (= 0.28-2), libb-hooks-op-check-perl (= 0.22-3+b5), libbinutils (= 2.47-2), libblas-dev (= 3.12.1-8), libblas3 (= 3.12.1-8), libblkid1 (= 2.42.2-2), libboost-dev (= 1.90.0.2), libboost1.90-dev (= 1.90.0-6), libbrotli-dev (= 1.2.0-3), libbrotli1 (= 1.2.0-3), libbsd0 (= 0.12.2-3), libbz2-1.0 (= 1.0.8-6+b2), libbz2-dev (= 1.0.8-6+b2), libc-bin (= 2.42-16), libc-dev-bin (= 2.42-17), libc-gconv-modules-extra (= 2.42-17), libc6 (= 2.42-17), libc6-dev (= 2.42-17), libcairo2 (= 1.18.4-3+b1), libcap-ng0 (= 0.9.3-1+b1), libcc1-0 (= 16.1.0-3), libclang-common-21-dev (= 1:21.1.8-10), libclang-cpp21 (= 1:21.1.8-10), libclang1-21 (= 1:21.1.8-10), libclass-c3-perl (= 0.35-2), libclass-load-perl (= 0.25-2), libclass-load-xs-perl (= 0.10-2+b5), libclone-perl (= 0.50-1+b1), libcom-err2 (= 1.47.4-1), libconfig-properties-perl (= 1.80-3), libcrypt1 (= 1:4.5.1-1+b1), libctf-nobfd0 (= 2.47-2), libctf0 (= 2.47-2), libcurl4-gnutls (= 8.21.0-2), libcurl4-openssl-dev (= 8.21.0-2), libcurl4t64 (= 8.21.0-2), libdata-optlist-perl (= 0.114-1), libdatrie1 (= 0.2.14-2), libdb5.3t64 (= 5.3.28+dfsg2-11+b1), libdebconfclient0 (= 0.283), libdebhelper-perl (= 14.3), libdeflate-dev (= 1.25-1), libdeflate0 (= 1.25-1), libdevel-callchecker-perl (= 0.009-3+b1), libdevel-globaldestruction-perl (= 0.14-4), libdevel-overloadinfo-perl (= 0.008-1), libdevel-stacktrace-perl (= 2.0500-1), libdist-checkconflicts-perl (= 0.11-2), libdpkg-perl (= 1.23.7), libdynaloader-functions-perl (= 0.004-2), libedit2 (= 3.1-20260512-1), libelf1t64 (= 0.195-1), libencode-locale-perl (= 1.05-3), libeval-closure-perl (= 0.14-3), libevent-2.1-7t64 (= 2.1.12-stable-10+b2), libexpat1 (= 2.8.2-1), libffi8 (= 3.7.1-2), libfile-stripnondeterminism-perl (= 1.15.1-1), libfile-which-perl (= 1.27-2), libfontconfig1 (= 2.17.1-5), libfontenc1 (= 1:1.1.8-1+b3), libfreetype6 (= 2.14.3+dfsg-2), libfribidi0 (= 1.0.16-5+b1), libgc1 (= 1:8.2.12-1), libgcc-15-dev (= 15.3.0-2), libgcc-16-dev (= 16.1.0-3), libgcc-s1 (= 16.1.0-3), libgdbm-compat4t64 (= 1.26-1+b2), libgdbm6t64 (= 1.26-1+b2), libgfortran-16-dev (= 16.1.0-3), libgfortran5 (= 16.1.0-3), libglib2.0-0t64 (= 2.88.3-2), libgmp-dev (= 2:6.3.0+dfsg-5+b2), libgmp10 (= 2:6.3.0+dfsg-5+b2), libgmpxx4ldbl (= 2:6.3.0+dfsg-5+b2), libgnutls-dane0t64 (= 3.8.13-1), libgnutls28-dev (= 3.8.13-1), libgnutls30t64 (= 3.8.13-1), libgomp1 (= 16.1.0-3), libgprofng0 (= 2.47-2), libgraphite2-3 (= 1.3.15-2), libgssapi-krb5-2 (= 1.22.1-3), libgssrpc4t64 (= 1.22.1-3), libharfbuzz0b (= 12.3.2-2+b2), libhogweed6t64 (= 3.10.2-1+b1), libhttp-date-perl (= 6.08-1), libhttp-message-perl (= 7.04-1), libhwasan0 (= 16.1.0-3), libice6 (= 2:1.1.1-1+b2), libicu-dev (= 78.3-2), libicu78 (= 78.3-2), libidn2-0 (= 2.3.8-5), libidn2-dev (= 2.3.8-5), libio-html-perl (= 1.004-3), libisl23 (= 0.28-1), libitm1 (= 16.1.0-3), libjansson4 (= 2.15.1-1), libjbig0 (= 2.1-6.1+b3), libjpeg-dev (= 1:3.1.3-4), libjpeg62-turbo (= 1:3.1.3-4), libjpeg62-turbo-dev (= 1:3.1.3-4), libk5crypto3 (= 1.22.1-3), libkadm5clnt-mit12 (= 1.22.1-3), libkadm5srv-mit12 (= 1.22.1-3), libkdb5-10t64 (= 1.22.1-3), libkeyutils1 (= 1.6.3-6+b2), libkrb5-3 (= 1.22.1-3), libkrb5-dev (= 1.22.1-3), libkrb5support0 (= 1.22.1-3), liblapack-dev (= 3.12.1-8), liblapack3 (= 3.12.1-8), libldap-dev (= 2.6.13+dfsg-1+b1), libldap2 (= 2.6.13+dfsg-1+b1), liblerc4 (= 4.2.0+ds-1), libllvm21 (= 1:21.1.8-10), liblsan0 (= 16.1.0-3), liblwp-mediatypes-perl (= 6.04-2), liblzma-dev (= 5.8.3-1), liblzma5 (= 5.8.3-1), libmagic-mgc (= 1:5.47-4), libmagic1t64 (= 1:5.47-4), libmd0 (= 1.2.0-2), libmodule-implementation-perl (= 0.09-2), libmodule-runtime-conflicts-perl (= 0.003-2), libmodule-runtime-perl (= 0.018-1), libmoose-perl (= 2.4000-1+b2), libmount1 (= 2.42.2-2), libmpc3 (= 1.3.1-3), libmpfr6 (= 4.2.2-3), libmro-compat-perl (= 0.15-2), libnamespace-clean-perl (= 0.27-2), libncurses-dev (= 6.6+20260608-2), libncurses6 (= 6.6+20260608-2), libncursesw6 (= 6.6+20260608-2), libnettle8t64 (= 3.10.2-1+b1), libnghttp2-14 (= 1.70.0-1), libnghttp2-dev (= 1.70.0-1), libnghttp3-9 (= 1.17.0-1), libnghttp3-dev (= 1.17.0-1), libngtcp2-16 (= 1.24.0-1), libngtcp2-crypto-gnutls8 (= 1.24.0-1), libngtcp2-crypto-ossl-dev (= 1.24.0-1), libngtcp2-crypto-ossl0 (= 1.24.0-1), libngtcp2-dev (= 1.24.0-1), libobjc-15-dev (= 15.3.0-2), libobjc4 (= 16.1.0-3), libopenblas-pthread-dev (= 0.3.30+ds-3), libopenblas0-pthread (= 0.3.30+ds-3), libp11-kit-dev (= 0.26.4-1), libp11-kit0 (= 0.26.4-1), libpackage-deprecationmanager-perl (= 0.18-1), libpackage-stash-perl (= 0.40-1), libpackage-stash-xs-perl (= 0.30-1+b6), libpam-modules (= 1.7.0-8), libpam-modules-bin (= 1.7.0-8), libpam-runtime (= 1.7.0-8), libpam0g (= 1.7.0-8), libpango-1.0-0 (= 1.58.0-1), libpangocairo-1.0-0 (= 1.58.0-1), libpangoft2-1.0-0 (= 1.58.0-1), libpaper-utils (= 2.2.5-0.4), libpaper2 (= 2.2.5-0.4), libparams-classify-perl (= 0.015-2+b6), libparams-util-perl (= 1.102-3+b2), libpcre2-16-0 (= 10.46-1+b2), libpcre2-32-0 (= 10.46-1+b2), libpcre2-8-0 (= 10.46-1+b2), libpcre2-dev (= 10.46-1+b2), libpcre2-posix3 (= 10.46-1+b2), libperl5.42 (= 5.42.2-3), libpipeline1 (= 1.5.8-3), libpixman-1-0 (= 0.46.4-1+b2), libpkgconf7 (= 2.5.1-4), libpng-dev (= 1.6.58-1), libpng16-16t64 (= 1.6.58-1), libproc2-1 (= 2:4.0.6-3), libpsl-dev (= 0.23.1-1), libpsl5t64 (= 0.23.1-1), libquadmath0 (= 16.1.0-3), libreadline-dev (= 8.3-4), libreadline8t64 (= 8.3-4), librtmp-dev (= 2.6-1), librtmp1 (= 2.6-1), libsasl2-2 (= 2.1.28+dfsg1-11), libsasl2-modules-db (= 2.1.28+dfsg1-11), libscalar-list-utils-perl (= 1:1.70-1+b1), libseccomp2 (= 2.6.1-1), libselinux1 (= 3.11-2), libsframe3 (= 2.47-2), libsharpyuv0 (= 1.5.0-0.1+b2), libsm6 (= 2:1.2.6-1+b2), libsmartcols1 (= 2.42.2-2), libssh2-1-dev (= 1.11.1-5), libssh2-1t64 (= 1.11.1-5), libssl-dev (= 3.6.3-1), libssl3t64 (= 3.6.3-1), libstdc++-15-dev (= 15.3.0-2), libstdc++-16-dev (= 16.1.0-3), libstdc++6 (= 16.1.0-3), libsub-exporter-perl (= 0.990-1), libsub-exporter-progressive-perl (= 0.001013-3), libsub-identify-perl (= 0.14-4+b1), libsub-install-perl (= 0.929-1), libsub-name-perl (= 0.28-1+b3), libswitch-perl (= 2.17-3), libsystemd0 (= 261.2-1), libtasn1-6 (= 4.21.0-2+b1), libtasn1-6-dev (= 4.21.0-2+b1), libtcl8.6 (= 8.6.18+dfsg-1), libtext-charwidth-perl (= 0.04-12+b1), libtext-wrapi18n-perl (= 0.06-11), libthai-data (= 0.1.30-3), libthai0 (= 0.1.30-3), libtiff6 (= 4.7.2-1), libtimedate-perl (= 2.3500-1), libtinfo6 (= 6.6+20260608-2), libtirpc-common (= 1.3.7+ds-1), libtirpc-dev (= 1.3.7+ds-1), libtirpc3t64 (= 1.3.7+ds-1), libtk8.6 (= 8.6.18-1), libtool (= 2.5.4-11), libtry-tiny-perl (= 0.32-1), libtsan2 (= 16.1.0-3), libubsan1 (= 16.1.0-3), libuchardet0 (= 0.0.8-2+b2), libudev1 (= 261.2-1), libunbound8 (= 1.25.1-1), libunistring-dev (= 1.4.2-1), libunistring5 (= 1.4.2-1), liburi-perl (= 5.35-1), libuuid1 (= 2.42.2-2), libvariable-magic-perl (= 0.64-1+b2), libwebp7 (= 1.5.0-0.1+b2), libwww-curl-perl (= 4.17-13+b2), libwww-curl-simple-perl (= 0.100191-3), libx11-6 (= 2:1.8.13-1), libx11-data (= 2:1.8.13-1), libxau6 (= 1:1.0.11-1+b2), libxcb-render0 (= 1.17.0-2+b2), libxcb-shm0 (= 1.17.0-2+b2), libxcb1 (= 1.17.0-2+b2), libxdmcp6 (= 1:1.1.5-2+b1), libxext6 (= 2:1.3.4-1+b4), libxft2 (= 2.3.6-1+b5), libxml2-16 (= 2.15.3+dfsg-1), libxmuu1 (= 2:1.1.3-4+b1), libxrender1 (= 1:0.9.12-1+b2), libxss1 (= 1:1.2.3-1+b4), libxt6t64 (= 1:1.2.1-1.3+b2), libz3-4 (= 4.13.3-1.1), libzstd-dev (= 1.5.7+dfsg-4), libzstd1 (= 1.5.7+dfsg-4), linux-libc-dev (= 7.1.6-1), llvm-21-linker-tools (= 1:21.1.8-10), lsb-base (= 11.6), m4 (= 1.4.21-1), make (= 4.4.1-3), man-db (= 2.13.1-1), mawk (= 1.3.4.20260302-1), ncurses-base (= 6.6+20260608-2), ncurses-bin (= 6.6+20260608-2), nettle-dev (= 3.10.2-1+b1), openssl (= 3.6.3-1), openssl-provider-legacy (= 3.6.3-1), patch (= 2.8-2), perl (= 5.42.2-3), perl-base (= 5.42.2-3), perl-modules-5.42 (= 5.42.2-3), pkgconf (= 2.5.1-4), pkgconf-bin (= 2.5.1-4), po-debconf (= 1.0.22), procps (= 2:4.0.6-3), r-base-core (= 4.6.1-1), r-base-dev (= 4.6.1-1), r-bioc-biocgenerics (= 0.58.1-1), r-bioc-biocparallel (= 1.46.0-1), r-bioc-biostrings (= 2.80.1+dfsg-1), r-bioc-genomeinfodb (= 1.48.0+dfsg-1), r-bioc-genomicranges (= 1.64.0+dfsg-1), r-bioc-iranges (= 2.46.0-1), r-bioc-rhtslib (= 3.8.0+dfsg-1), r-bioc-s4vectors (= 0.50.1+dfsg-1), r-bioc-seqinfo (= 1.2.0+dfsg-1), r-bioc-ucsc.utils (= 1.8.0+dfsg-1), r-bioc-xvector (= 0.52.0-1), r-cran-askpass (= 1.2.1-3), r-cran-bh (= 1.90.0-1), r-cran-bitops (= 1.0-9-3), r-cran-codetools (= 0.2-20-1), r-cran-cpp11 (= 0.5.5-1), r-cran-crayon (= 1.5.3-2), r-cran-curl (= 7.1.0+dfsg-2), r-cran-formatr (= 1.14-2), r-cran-futile.logger (= 1.4.3-4), r-cran-futile.options (= 1.0.1-3), r-cran-generics (= 0.1.4-1), r-cran-httr (= 1.4.8+dfsg-1), r-cran-jsonlite (= 2.0.0+dfsg-2), r-cran-lambda.r (= 1.2.4-2), r-cran-mime (= 0.13-2), r-cran-openssl (= 2.4.2+dfsg-1), r-cran-r6 (= 2.6.1-2), r-cran-snow (= 1:0.4.4-2), r-cran-sys (= 3.4.3-2), r-pkg-team-core-architecture (= 20260707), readline-common (= 8.3-4), rpcsvc-proto (= 1.4.4-1), sed (= 4.9-3), sensible-utils (= 0.0.26), sysvinit-utils (= 3.18-1), tar (= 1.35+dfsg-4), tzdata (= 2026c-1), ucf (= 3.0056), unzip (= 6.0-30), util-linux (= 2.42.2-2), x11-common (= 1:7.7+26), xauth (= 1:1.1.2-1.1), xdg-utils (= 1.2.1-2), xfonts-encodings (= 1:1.0.4-2.2), xfonts-utils (= 1:7.7+7), xz-utils (= 5.8.3-1), zip (= 3.0-15), zlib1g (= 1:1.3.dfsg+really1.3.2-3), zlib1g-dev (= 1:1.3.dfsg+really1.3.2-3) Environment: DEB_BUILD_OPTIONS="parallel=4" LANG="C.UTF-8" LC_COLLATE="C.UTF-8" LC_CTYPE="C.UTF-8" SOURCE_DATE_EPOCH="1785849774" +------------------------------------------------------------------------------+ | Package contents Tue, 04 Aug 2026 16:25:49 +0000 | +------------------------------------------------------------------------------+ r-bioc-rsamtools-dbgsym_2.28.0+dfsg-1_amd64.deb ----------------------------------------------- new Debian package, version 2.0. size 1040584 bytes: control archive=548 bytes. 413 bytes, 12 lines control 106 bytes, 1 lines md5sums Package: r-bioc-rsamtools-dbgsym Source: r-bioc-rsamtools Version: 2.28.0+dfsg-1 Auto-Built-Package: debug-symbols Architecture: amd64 Maintainer: Debian R Packages Maintainers Installed-Size: 1120 Depends: r-bioc-rsamtools (= 2.28.0+dfsg-1) Section: debug Priority: optional Description: debug symbols for r-bioc-rsamtools Build-Ids: ac80b6c6bac075c405f7c86f13fe6970f9d536dd drwxr-xr-x root/root 0 2026-08-04 13:22 ./ drwxr-xr-x root/root 0 2026-08-04 13:22 ./usr/ drwxr-xr-x root/root 0 2026-08-04 13:22 ./usr/lib/ drwxr-xr-x root/root 0 2026-08-04 13:22 ./usr/lib/debug/ drwxr-xr-x root/root 0 2026-08-04 13:22 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2026-08-04 13:22 ./usr/lib/debug/.build-id/ac/ -rw-r--r-- root/root 1135648 2026-08-04 13:22 ./usr/lib/debug/.build-id/ac/80b6c6bac075c405f7c86f13fe6970f9d536dd.debug drwxr-xr-x root/root 0 2026-08-04 13:22 ./usr/share/ drwxr-xr-x root/root 0 2026-08-04 13:22 ./usr/share/doc/ lrwxrwxrwx root/root 0 2026-08-04 13:22 ./usr/share/doc/r-bioc-rsamtools-dbgsym -> r-bioc-rsamtools r-bioc-rsamtools_2.28.0+dfsg-1_amd64.deb ---------------------------------------- new Debian package, version 2.0. size 2624896 bytes: control archive=3804 bytes. 1045 bytes, 14 lines control 9861 bytes, 108 lines md5sums Package: r-bioc-rsamtools Version: 2.28.0+dfsg-1 Architecture: amd64 Maintainer: Debian R Packages Maintainers Installed-Size: 4657 Depends: r-api-4.0, r-api-bioc-3.23, r-bioc-seqinfo, r-bioc-genomicranges (>= 1.61.1), r-bioc-biostrings (>= 2.77.2), r-bioc-biocgenerics (>= 0.25.1), r-bioc-s4vectors (>= 0.17.25), r-bioc-iranges (>= 2.13.12), r-bioc-xvector (>= 0.19.7), r-cran-bitops, r-bioc-biocparallel, r-bioc-rhtslib (>= 3.3.1), libbz2-1.0, libc6 (>= 2.38), libcurl4t64 (>= 7.18.0), libgcc-s1 (>= 3.0), liblzma5 (>= 5.1.1alpha+20120614), libstdc++6 (>= 5.2), zlib1g (>= 1:1.2.3.4), r-pkg-team-core-architecture Section: gnu-r Priority: optional Homepage: https://bioconductor.org/packages/Rsamtools/ Description: GNU R binary alignment (BAM), variant call (BCF), or tabix file import This package provides an interface to the 'samtools', 'bcftools', and 'tabix' utilities for manipulating SAM (Sequence Alignment / Map), binary variant call (BCF) and compressed indexed tab-delimited (tabix) files. drwxr-xr-x root/root 0 2026-08-04 13:22 ./ drwxr-xr-x root/root 0 2026-08-04 13:22 ./usr/ drwxr-xr-x root/root 0 2026-08-04 13:22 ./usr/lib/ drwxr-xr-x root/root 0 2026-08-04 13:22 ./usr/lib/R/ drwxr-xr-x root/root 0 2026-08-04 13:22 ./usr/lib/R/site-library/ drwxr-xr-x root/root 0 2026-08-04 13:22 ./usr/lib/R/site-library/Rsamtools/ -rw-r--r-- root/root 2458 2026-08-04 13:22 ./usr/lib/R/site-library/Rsamtools/DESCRIPTION -rw-r--r-- root/root 2303 2026-08-04 13:22 ./usr/lib/R/site-library/Rsamtools/INDEX drwxr-xr-x root/root 0 2026-08-04 13:22 ./usr/lib/R/site-library/Rsamtools/Meta/ -rw-r--r-- root/root 3285 2026-08-04 13:22 ./usr/lib/R/site-library/Rsamtools/Meta/Rd.rds -rw-r--r-- root/root 123 2026-08-04 13:22 ./usr/lib/R/site-library/Rsamtools/Meta/features.rds -rw-r--r-- root/root 3402 2026-08-04 13:22 ./usr/lib/R/site-library/Rsamtools/Meta/hsearch.rds -rw-r--r-- root/root 2466 2026-08-04 13:22 ./usr/lib/R/site-library/Rsamtools/Meta/links.rds -rw-r--r-- root/root 775 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