=============================================================================== About this build: this rebuild has been done as part of reproduce.debian.net where we aim to reproduce Debian binary packages distributed via ftp.debian.org, by rebuilding using the exact same packages as the original build on the buildds, as described in the relevant .buildinfo file from buildinfos.debian.net. For more information please go to https://reproduce.debian.net or join #debian-reproducible on irc.debian.org =============================================================================== Preparing download of sources for /srv/rebuilderd/tmp/rebuilderdf83S52/inputs/hmmer_3.4+dfsg-3_amd64.buildinfo Source: hmmer Version: 3.4+dfsg-3 rebuilderd-worker node: osuosl43-amd64 +------------------------------------------------------------------------------+ | Downloading sources Sat, 11 Oct 2025 17:16:56 +0000 | +------------------------------------------------------------------------------+ Get:1 https://deb.debian.org/debian trixie InRelease [140 kB] Get:2 https://deb.debian.org/debian-security trixie-security InRelease [43.4 kB] Get:3 https://deb.debian.org/debian trixie-updates InRelease [47.3 kB] Get:4 https://deb.debian.org/debian trixie-proposed-updates InRelease [55.8 kB] Get:5 https://deb.debian.org/debian trixie-backports InRelease [53.8 kB] Get:6 https://deb.debian.org/debian forky InRelease [147 kB] Get:7 https://deb.debian.org/debian sid InRelease [207 kB] Get:8 https://deb.debian.org/debian experimental InRelease [101 kB] Get:9 https://deb.debian.org/debian trixie/non-free-firmware Sources [6,536 B] Get:10 https://deb.debian.org/debian trixie/main Sources [10.5 MB] Get:11 https://deb.debian.org/debian-security trixie-security/main Sources [57.4 kB] Get:12 https://deb.debian.org/debian trixie-updates/main Sources [2,788 B] Get:13 https://deb.debian.org/debian trixie-proposed-updates/main Sources [22.3 kB] Get:14 https://deb.debian.org/debian trixie-backports/non-free-firmware Sources [1,052 B] Get:15 https://deb.debian.org/debian trixie-backports/main Sources [56.8 kB] Get:16 https://deb.debian.org/debian forky/main Sources [10.7 MB] Get:17 https://deb.debian.org/debian forky/non-free-firmware Sources [7,128 B] Get:18 https://deb.debian.org/debian sid/non-free-firmware Sources [9,100 B] Get:19 https://deb.debian.org/debian sid/main Sources [11.2 MB] Get:20 https://deb.debian.org/debian experimental/non-free-firmware Sources [2,572 B] Get:21 https://deb.debian.org/debian experimental/main Sources [360 kB] Fetched 33.6 MB in 4s (8,372 kB/s) Reading package lists... 'https://deb.debian.org/debian/pool/main/h/hmmer/hmmer_3.4%2bdfsg-3.dsc' hmmer_3.4+dfsg-3.dsc 1774 SHA256:ed6f9a78f0395e7ae7bd682a72b3b6a3553508fc5be636186dc71e1eee988278 'https://deb.debian.org/debian/pool/main/h/hmmer/hmmer_3.4%2bdfsg.orig.tar.xz' hmmer_3.4+dfsg.orig.tar.xz 13297988 SHA256:87ada77366ed6ab0159a0c1217f8a55cbe9a708c4a98cf644929eb3703ce3309 'https://deb.debian.org/debian/pool/main/h/hmmer/hmmer_3.4%2bdfsg-3.debian.tar.xz' hmmer_3.4+dfsg-3.debian.tar.xz 12996 SHA256:3864769123ce5f52fca65a9fad242e1930dc813e28baca4d09075d143379deda 87ada77366ed6ab0159a0c1217f8a55cbe9a708c4a98cf644929eb3703ce3309 hmmer_3.4+dfsg.orig.tar.xz 3864769123ce5f52fca65a9fad242e1930dc813e28baca4d09075d143379deda hmmer_3.4+dfsg-3.debian.tar.xz ed6f9a78f0395e7ae7bd682a72b3b6a3553508fc5be636186dc71e1eee988278 hmmer_3.4+dfsg-3.dsc +------------------------------------------------------------------------------+ | Calling debrebuild Sat, 11 Oct 2025 17:17:01 +0000 | +------------------------------------------------------------------------------+ Rebuilding hmmer=3.4+dfsg-3 in /srv/rebuilderd/tmp/rebuilderdf83S52/inputs now. + nice /usr/bin/debrebuild --buildresult=/srv/rebuilderd/tmp/rebuilderdf83S52/out --builder=sbuild+unshare --cache=/srv/rebuilderd/cache -- /srv/rebuilderd/tmp/rebuilderdf83S52/inputs/hmmer_3.4+dfsg-3_amd64.buildinfo /srv/rebuilderd/tmp/rebuilderdf83S52/inputs/hmmer_3.4+dfsg-3_amd64.buildinfo contains a GPG signature which has NOT been validated Using defined Build-Path: /build/reproducible-path/hmmer-3.4+dfsg I: verifying dsc... successful! Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid InRelease [207 kB] Get:2 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 Packages [10.2 MB] Fetched 10.4 MB in 1s (8336 kB/s) Reading package lists... W: http://snapshot.debian.org/archive/debian/20250929T085637Z/dists/sid/InRelease: Loading /etc/apt/trusted.gpg from deprecated option Dir::Etc::Trusted Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libperl5.40 amd64 5.40.1-6 [4341 kB] Fetched 4341 kB in 0s (70.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl7k2uvlz/libperl5.40_5.40.1-6_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libisl23 amd64 0.27-1 [659 kB] Fetched 659 kB in 0s (48.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptf3kqc0s/libisl23_0.27-1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 gcc-x86-64-linux-gnu amd64 4:15.2.0-4 [1436 B] Fetched 1436 B in 0s (136 kB/s) dpkg-name: info: moved 'gcc-x86-64-linux-gnu_4%3a15.2.0-4_amd64.deb' to '/srv/rebuilderd/tmp/tmpf9z5ot4t/gcc-x86-64-linux-gnu_15.2.0-4_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libncursesw6 amd64 6.5+20250216-2 [135 kB] Fetched 135 kB in 0s (1793 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4gkto4yz/libncursesw6_6.5+20250216-2_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libasan8 amd64 15.2.0-4 [2778 kB] Fetched 2778 kB in 0s (79.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbyne6fdr/libasan8_15.2.0-4_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libgmp10 amd64 2:6.3.0+dfsg-5 [574 kB] Fetched 574 kB in 0s (24.4 MB/s) dpkg-name: info: moved 'libgmp10_2%3a6.3.0+dfsg-5_amd64.deb' to '/srv/rebuilderd/tmp/tmpvzrjc8hp/libgmp10_6.3.0+dfsg-5_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libdpkg-perl all 1.22.21 [650 kB] Fetched 650 kB in 0s (45.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm20z9w4r/libdpkg-perl_1.22.21_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 base-files amd64 14 [72.9 kB] Fetched 72.9 kB in 0s (6685 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprq01wclk/base-files_14_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libbinutils amd64 2.45-7 [580 kB] Fetched 580 kB in 0s (40.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnak259pm/libbinutils_2.45-7_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 grep amd64 3.12-1 [443 kB] Fetched 443 kB in 0s (15.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz1mlosvb/grep_3.12-1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libpam-modules amd64 1.7.0-5 [179 kB] Fetched 179 kB in 0s (7690 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt8y12s99/libpam-modules_1.7.0-5_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 liblsan0 amd64 15.2.0-4 [1249 kB] Fetched 1249 kB in 0s (71.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2eoxo7sx/liblsan0_15.2.0-4_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 ncurses-base all 6.5+20250216-2 [273 kB] Fetched 273 kB in 0s (9419 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6_to7_na/ncurses-base_6.5+20250216-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 python3 amd64 3.13.7-1 [28.3 kB] Fetched 28.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpelud74js/python3_3.13.7-1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Fetched 104 kB in 0s (9927 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4g5ovnye/libarchive-zip-perl_1.68-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 automake all 1:1.17-4 [862 kB] Fetched 862 kB in 0s (27.6 MB/s) dpkg-name: info: moved 'automake_1%3a1.17-4_all.deb' to '/srv/rebuilderd/tmp/tmpmb8rm4i6/automake_1.17-4_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libdivsufsort3 amd64 2.0.1-6+b1 [45.9 kB] Fetched 45.9 kB in 0s (666 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_jtyqug8/libdivsufsort3_2.0.1-6+b1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libgdbm6t64 amd64 1.26-1 [78.5 kB] Fetched 78.5 kB in 0s (7780 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6h35vpvk/libgdbm6t64_1.26-1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libatomic1 amd64 15.2.0-4 [9508 B] Fetched 9508 B in 0s (898 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3l9ln9of/libatomic1_15.2.0-4_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libpam-runtime all 1.7.0-5 [249 kB] Fetched 249 kB in 0s (20.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu7mxhfyt/libpam-runtime_1.7.0-5_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libaudit1 amd64 1:4.1.2-1 [60.4 kB] Fetched 60.4 kB in 0s (5957 kB/s) dpkg-name: info: moved 'libaudit1_1%3a4.1.2-1_amd64.deb' to '/srv/rebuilderd/tmp/tmpdd1jmmhp/libaudit1_4.1.2-1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Fetched 42.0 kB in 0s (2035 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplsr1j9qu/libpipeline1_1.5.8-1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libpython3.13-minimal amd64 3.13.7-1 [864 kB] Fetched 864 kB in 0s (59.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpa8vzxz4_/libpython3.13-minimal_3.13.7-1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 tzdata all 2025b-5 [260 kB] Fetched 260 kB in 0s (14.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpk951pi6j/tzdata_2025b-5_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 mawk amd64 1.3.4.20250131-1 [141 kB] Fetched 141 kB in 0s (12.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp43xlh715/mawk_1.3.4.20250131-1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 cpp amd64 4:15.2.0-4 [1564 B] Fetched 1564 B in 0s (0 B/s) dpkg-name: info: moved 'cpp_4%3a15.2.0-4_amd64.deb' to '/srv/rebuilderd/tmp/tmpsfgc8rgu/cpp_15.2.0-4_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 cpp-x86-64-linux-gnu amd64 4:15.2.0-4 [5292 B] Fetched 5292 B in 0s (0 B/s) dpkg-name: info: moved 'cpp-x86-64-linux-gnu_4%3a15.2.0-4_amd64.deb' to '/srv/rebuilderd/tmp/tmpaursj9oh/cpp-x86-64-linux-gnu_15.2.0-4_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 perl amd64 5.40.1-6 [267 kB] Fetched 267 kB in 0s (7507 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxxev9bj5/perl_5.40.1-6_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 sed amd64 4.9-2 [329 kB] Fetched 329 kB in 0s (15.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgau1i6at/sed_4.9-2_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 cpp-15 amd64 15.2.0-4 [1272 B] Fetched 1272 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9m_70uo2/cpp-15_15.2.0-4_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 tar amd64 1.35+dfsg-3.1 [815 kB] Fetched 815 kB in 0s (37.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbiia0pvu/tar_1.35+dfsg-3.1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 binutils-x86-64-linux-gnu amd64 2.45-7 [1097 kB] Fetched 1097 kB in 0s (39.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp53u2e_hz/binutils-x86-64-linux-gnu_2.45-7_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libpam-modules-bin amd64 1.7.0-5 [49.1 kB] Fetched 49.1 kB in 0s (4696 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpw2l2zbrk/libpam-modules-bin_1.7.0-5_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 debianutils amd64 5.23.2 [92.4 kB] Fetched 92.4 kB in 0s (8973 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpaus69dfo/debianutils_5.23.2_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 diffutils amd64 1:3.10-4 [387 kB] Fetched 387 kB in 0s (32.6 MB/s) dpkg-name: info: moved 'diffutils_1%3a3.10-4_amd64.deb' to '/srv/rebuilderd/tmp/tmp74vuifx2/diffutils_3.10-4_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libsmartcols1 amd64 2.41.2-2 [145 kB] Fetched 145 kB in 0s (2957 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz2s1qlku/libsmartcols1_2.41.2-2_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 perl-modules-5.40 all 5.40.1-6 [3019 kB] Fetched 3019 kB in 0s (104 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp4rupwh8/perl-modules-5.40_5.40.1-6_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 debconf all 1.5.91 [121 kB] Fetched 121 kB in 0s (8964 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdpgruasc/debconf_1.5.91_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 m4 amd64 1.4.20-1 [324 kB] Fetched 324 kB in 0s (13.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqc6m3tz7/m4_1.4.20-1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 liblzma5 amd64 5.8.1-1.1 [316 kB] Fetched 316 kB in 0s (24.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3mkz0ol1/liblzma5_5.8.1-1.1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 dash amd64 0.5.12-12 [98.5 kB] Fetched 98.5 kB in 0s (8479 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt521t70q/dash_0.5.12-12_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libgomp1 amd64 15.2.0-4 [140 kB] Fetched 140 kB in 0s (1608 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd71t14z2/libgomp1_15.2.0-4_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 bsdextrautils amd64 2.41.2-2 [98.1 kB] Fetched 98.1 kB in 0s (9679 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3jl6snbi/bsdextrautils_2.41.2-2_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libmount1 amd64 2.41.2-2 [211 kB] Fetched 211 kB in 0s (17.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpug2779vn/libmount1_2.41.2-2_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 gettext amd64 0.23.1-2+b1 [1680 kB] Fetched 1680 kB in 0s (58.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr321m0pg/gettext_0.23.1-2+b1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 groff-base amd64 1.23.0-9 [1187 kB] Fetched 1187 kB in 0s (71.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjpbhd5xw/groff-base_1.23.0-9_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 sysvinit-utils amd64 3.14-4 [34.1 kB] Fetched 34.1 kB in 0s (2217 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp95_npnua/sysvinit-utils_3.14-4_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 coreutils amd64 9.7-3 [3024 kB] Fetched 3024 kB in 0s (70.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn6gt114l/coreutils_9.7-3_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libgprofng0 amd64 2.45-7 [869 kB] Fetched 869 kB in 0s (55.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdr6hzak7/libgprofng0_2.45-7_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libblkid1 amd64 2.41.2-2 [174 kB] Fetched 174 kB in 0s (15.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0agyr1vn/libblkid1_2.41.2-2_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 dh-autoreconf all 21 [12.2 kB] Fetched 12.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6dno2uix/dh-autoreconf_21_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libseccomp2 amd64 2.6.0-2 [51.7 kB] Fetched 51.7 kB in 0s (4815 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8jidzfrz/libseccomp2_2.6.0-2_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libdb5.3t64 amd64 5.3.28+dfsg2-9 [704 kB] Fetched 704 kB in 0s (50.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpijyjq56h/libdb5.3t64_5.3.28+dfsg2-9_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 g++-x86-64-linux-gnu amd64 4:15.2.0-4 [1196 B] Fetched 1196 B in 0s (116 kB/s) dpkg-name: info: moved 'g++-x86-64-linux-gnu_4%3a15.2.0-4_amd64.deb' to '/srv/rebuilderd/tmp/tmps9bo0xx6/g++-x86-64-linux-gnu_15.2.0-4_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libselinux1 amd64 3.8.1-1 [84.7 kB] Fetched 84.7 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptnfb325x/libselinux1_3.8.1-1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 perl-base amd64 5.40.1-6 [1666 kB] Fetched 1666 kB in 0s (81.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpryv7la6b/perl-base_5.40.1-6_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 dwz amd64 0.16-2 [108 kB] Fetched 108 kB in 0s (3250 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo321yyg9/dwz_0.16-2_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libattr1 amd64 1:2.5.2-3 [22.9 kB] Fetched 22.9 kB in 0s (2164 kB/s) dpkg-name: info: moved 'libattr1_1%3a2.5.2-3_amd64.deb' to '/srv/rebuilderd/tmp/tmpmeteua5v/libattr1_2.5.2-3_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libitm1 amd64 15.2.0-4 [26.5 kB] Fetched 26.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr81pjwzo/libitm1_15.2.0-4_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libacl1 amd64 2.3.2-2+b1 [32.9 kB] Fetched 32.9 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjbm3qipg/libacl1_2.3.2-2+b1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libuchardet0 amd64 0.0.8-2 [68.5 kB] Fetched 68.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjaamz6gv/libuchardet0_0.0.8-2_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libcc1-0 amd64 15.2.0-4 [42.7 kB] Fetched 42.7 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgk0c24ka/libcc1-0_15.2.0-4_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libgcc-15-dev amd64 15.2.0-4 [2719 kB] Fetched 2719 kB in 0s (31.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph6koq685/libgcc-15-dev_15.2.0-4_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libpython3-stdlib amd64 3.13.7-1 [10.2 kB] Fetched 10.2 kB in 0s (958 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0uw2i1jx/libpython3-stdlib_3.13.7-1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libdebconfclient0 amd64 0.280 [10.6 kB] Fetched 10.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbpp5p4zh/libdebconfclient0_0.280_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 gzip amd64 1.13-1 [138 kB] Fetched 138 kB in 0s (4048 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpylsr6cvq/gzip_1.13-1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libgcc-s1 amd64 15.2.0-4 [71.7 kB] Fetched 71.7 kB in 0s (6747 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8w8uki91/libgcc-s1_15.2.0-4_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libcap2 amd64 1:2.75-10+b1 [28.8 kB] Fetched 28.8 kB in 0s (0 B/s) dpkg-name: info: moved 'libcap2_1%3a2.75-10+b1_amd64.deb' to '/srv/rebuilderd/tmp/tmpi9lhxg61/libcap2_2.75-10+b1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libctf-nobfd0 amd64 2.45-7 [167 kB] Fetched 167 kB in 0s (4782 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplpn919ma/libctf-nobfd0_2.45-7_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 rpcsvc-proto amd64 1.4.3-1 [63.3 kB] Fetched 63.3 kB in 0s (6024 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9xeqk_x9/rpcsvc-proto_1.4.3-1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libmpfr6 amd64 4.2.2-2 [742 kB] Fetched 742 kB in 0s (54.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpesezlw55/libmpfr6_4.2.2-2_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libaudit-common all 1:4.1.2-1 [14.3 kB] Fetched 14.3 kB in 0s (1007 kB/s) dpkg-name: info: moved 'libaudit-common_1%3a4.1.2-1_all.deb' to '/srv/rebuilderd/tmp/tmp0lmz1a0i/libaudit-common_4.1.2-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 g++ amd64 4:15.2.0-4 [1344 B] Fetched 1344 B in 0s (121 kB/s) dpkg-name: info: moved 'g++_4%3a15.2.0-4_amd64.deb' to '/srv/rebuilderd/tmp/tmplx95z_pe/g++_15.2.0-4_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libunistring5 amd64 1.3-2 [477 kB] Fetched 477 kB in 0s (27.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5vv6sb0l/libunistring5_1.3-2_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libubsan1 amd64 15.2.0-4 [1108 kB] Fetched 1108 kB in 0s (63.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphpyhgjdw/libubsan1_15.2.0-4_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 cpp-15-x86-64-linux-gnu amd64 15.2.0-4 [76.3 MB] Fetched 76.3 MB in 1s (66.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqnx9y6i0/cpp-15-x86-64-linux-gnu_15.2.0-4_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 dpkg-dev all 1.22.21 [1338 kB] Fetched 1338 kB in 0s (56.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfen2atvm/dpkg-dev_1.22.21_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libhwasan0 amd64 15.2.0-4 [1538 kB] Fetched 1538 kB in 0s (20.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpieagxx7x/libhwasan0_15.2.0-4_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libuuid1 amd64 2.41.2-2 [38.4 kB] Fetched 38.4 kB in 0s (1645 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpf5k2lzf_/libuuid1_2.41.2-2_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 binutils-common amd64 2.45-7 [2558 kB] Fetched 2558 kB in 0s (89.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc5xdiudn/binutils-common_2.45-7_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libquadmath0 amd64 15.2.0-4 [145 kB] Fetched 145 kB in 0s (13.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpeu_1e_7v/libquadmath0_15.2.0-4_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libpcre2-8-0 amd64 10.46-1 [298 kB] Fetched 298 kB in 0s (25.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqjzomz0s/libpcre2-8-0_10.46-1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 sensible-utils all 0.0.26 [27.0 kB] Fetched 27.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqus460z_/sensible-utils_0.0.26_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 python3.13 amd64 3.13.7-1 [761 kB] Fetched 761 kB in 0s (49.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpev6rpmgr/python3.13_3.13.7-1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 xz-utils amd64 5.8.1-1.1 [663 kB] Fetched 663 kB in 0s (45.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp39r8tzxc/xz-utils_5.8.1-1.1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 findutils amd64 4.10.0-3 [700 kB] Fetched 700 kB in 0s (47.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgpbf27m5/findutils_4.10.0-3_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libtinfo6 amd64 6.5+20250216-2 [348 kB] Fetched 348 kB in 0s (28.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph91_dxd9/libtinfo6_6.5+20250216-2_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libexpat1 amd64 2.7.3-1 [112 kB] Fetched 112 kB in 0s (9584 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpw3wgmx6n/libexpat1_2.7.3-1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 patch amd64 2.8-2 [134 kB] Fetched 134 kB in 0s (11.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4ld4znr_/patch_2.8-2_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 hostname amd64 3.25 [11.0 kB] Fetched 11.0 kB in 0s (1022 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp6l60rqf/hostname_3.25_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libc-bin amd64 2.41-12 [637 kB] Fetched 637 kB in 0s (44.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7j85kpyk/libc-bin_2.41-12_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libctf0 amd64 2.45-7 [100 kB] Fetched 100 kB in 0s (9031 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmn88zdp0/libctf0_2.45-7_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 autopoint all 0.23.1-2 [770 kB] Fetched 770 kB in 0s (53.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpk__30dh_/autopoint_0.23.1-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libsframe2 amd64 2.45-7 [81.0 kB] Fetched 81.0 kB in 0s (7326 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqgvjcna2/libsframe2_2.45-7_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libgdbm-compat4t64 amd64 1.26-1 [52.8 kB] Fetched 52.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3yqjm6m1/libgdbm-compat4t64_1.26-1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 python3-minimal amd64 3.13.7-1 [27.2 kB] Fetched 27.2 kB in 0s (2572 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohjxs4rz/python3-minimal_3.13.7-1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 python3.13-minimal amd64 3.13.7-1 [2216 kB] Fetched 2216 kB in 0s (74.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc43p3422/python3.13-minimal_3.13.7-1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libpython3.13-stdlib amd64 3.13.7-1 [1960 kB] Fetched 1960 kB in 0s (66.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp975nliqt/libpython3.13-stdlib_3.13.7-1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 dh-strip-nondeterminism all 1.15.0-1 [8812 B] Fetched 8812 B in 0s (776 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2ji5fxjs/dh-strip-nondeterminism_1.15.0-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libbz2-1.0 amd64 1.0.8-6 [37.9 kB] Fetched 37.9 kB in 0s (3589 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu2d1mrof/libbz2-1.0_1.0.8-6_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libmd0 amd64 1.1.0-2+b1 [36.3 kB] Fetched 36.3 kB in 0s (1101 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5mifom6f/libmd0_1.1.0-2+b1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 gettext-base amd64 0.23.1-2+b1 [244 kB] Fetched 244 kB in 0s (21.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjuqcbkrv/gettext-base_0.23.1-2+b1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libc-dev-bin amd64 2.41-12 [58.2 kB] Fetched 58.2 kB in 0s (5558 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpw8m2i5am/libc-dev-bin_2.41-12_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 util-linux amd64 2.41.2-2 [1165 kB] Fetched 1165 kB in 0s (64.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_m9v03fd/util-linux_2.41.2-2_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 linux-libc-dev all 6.16.9-1 [2543 kB] Fetched 2543 kB in 0s (56.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7rruhtxc/linux-libc-dev_6.16.9-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libdivsufsort-dev amd64 2.0.1-6+b1 [19.1 kB] Fetched 19.1 kB in 0s (677 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpguzp9b0_/libdivsufsort-dev_2.0.1-6+b1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 g++-15-x86-64-linux-gnu amd64 15.2.0-4 [81.5 MB] Fetched 81.5 MB in 6s (13.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5dgt5tvn/g++-15-x86-64-linux-gnu_15.2.0-4_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libcrypt-dev amd64 1:4.4.38-1 [119 kB] Fetched 119 kB in 0s (3424 kB/s) dpkg-name: info: moved 'libcrypt-dev_1%3a4.4.38-1_amd64.deb' to '/srv/rebuilderd/tmp/tmp8v202pdv/libcrypt-dev_4.4.38-1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 dpkg amd64 1.22.21 [1538 kB] Fetched 1538 kB in 0s (60.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwfegg0is/dpkg_1.22.21_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libmagic-mgc amd64 1:5.46-5 [338 kB] Fetched 338 kB in 0s (25.9 MB/s) dpkg-name: info: moved 'libmagic-mgc_1%3a5.46-5_amd64.deb' to '/srv/rebuilderd/tmp/tmp0guv4j4a/libmagic-mgc_5.46-5_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libc6-dev amd64 2.41-12 [1991 kB] Fetched 1991 kB in 0s (45.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphqt114ig/libc6-dev_2.41-12_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libxml2-16 amd64 2.14.5+dfsg-0.2 [638 kB] Fetched 638 kB in 0s (17.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwrns5_5s/libxml2-16_2.14.5+dfsg-0.2_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 gcc amd64 4:15.2.0-4 [5160 B] Fetched 5160 B in 0s (478 kB/s) dpkg-name: info: moved 'gcc_4%3a15.2.0-4_amd64.deb' to '/srv/rebuilderd/tmp/tmpsrndma7i/gcc_15.2.0-4_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 autotools-dev all 20240727.1 [60.2 kB] Fetched 60.2 kB in 0s (5745 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxm73tkyb/autotools-dev_20240727.1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 media-types all 13.0.0 [29.3 kB] Fetched 29.3 kB in 0s (2774 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp60ss98l5/media-types_13.0.0_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 base-passwd amd64 3.6.7 [53.7 kB] Fetched 53.7 kB in 0s (4916 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp50mgl57f/base-passwd_3.6.7_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 bzip2 amd64 1.0.8-6 [40.5 kB] Fetched 40.5 kB in 0s (3990 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpncp7ba2q/bzip2_1.0.8-6_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 file amd64 1:5.46-5 [43.6 kB] Fetched 43.6 kB in 0s (4176 kB/s) dpkg-name: info: moved 'file_1%3a5.46-5_amd64.deb' to '/srv/rebuilderd/tmp/tmpf_6wewup/file_5.46-5_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libreadline8t64 amd64 8.3-3 [191 kB] Fetched 191 kB in 0s (17.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyxe385ei/libreadline8t64_8.3-3_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libstdc++6 amd64 15.2.0-4 [738 kB] Fetched 738 kB in 0s (50.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjm_waez5/libstdc++6_15.2.0-4_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libelf1t64 amd64 0.193-3 [192 kB] Fetched 192 kB in 0s (16.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpf2_euf_7/libelf1t64_0.193-3_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libtsan2 amd64 15.2.0-4 [2491 kB] Fetched 2491 kB in 0s (56.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1_d6hvn3/libtsan2_15.2.0-4_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 gcc-15-x86-64-linux-gnu amd64 15.2.0-4 [85.6 MB] Fetched 85.6 MB in 1s (118 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp763gh7jf/gcc-15-x86-64-linux-gnu_15.2.0-4_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libstdc++-15-dev amd64 15.2.0-4 [2421 kB] Fetched 2421 kB in 0s (69.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8jgdav7b/libstdc++-15-dev_15.2.0-4_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libjansson4 amd64 2.14-2+b3 [39.8 kB] Fetched 39.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkm7pub7a/libjansson4_2.14-2+b3_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libpam0g amd64 1.7.0-5 [69.9 kB] Fetched 69.9 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgq29tl1f/libpam0g_1.7.0-5_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libc6 amd64 2.41-12 [2846 kB] Fetched 2846 kB in 0s (85.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpib4brm4p/libc6_2.41-12_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 zlib1g amd64 1:1.3.dfsg+really1.3.1-1+b1 [88.9 kB] Fetched 88.9 kB in 0s (2913 kB/s) dpkg-name: info: moved 'zlib1g_1%3a1.3.dfsg+really1.3.1-1+b1_amd64.deb' to '/srv/rebuilderd/tmp/tmp6_fan9du/zlib1g_1.3.dfsg+really1.3.1-1+b1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Fetched 22.9 kB in 0s (2171 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyknrv9q1/intltool-debian_0.35.0+20060710.6_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libssl3t64 amd64 3.5.3-1 [2445 kB] Fetched 2445 kB in 0s (79.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyoi_x22v/libssl3t64_3.5.3-1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 gcc-15-base amd64 15.2.0-4 [52.8 kB] Fetched 52.8 kB in 0s (4863 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3g8ac9kk/gcc-15-base_15.2.0-4_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 gcc-15 amd64 15.2.0-4 [522 kB] Fetched 522 kB in 0s (38.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5c50i056/gcc-15_15.2.0-4_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 binutils amd64 2.45-7 [269 kB] Fetched 269 kB in 0s (21.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmufquxjn/binutils_2.45-7_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libudev1 amd64 258-1 [156 kB] Fetched 156 kB in 0s (14.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4a7r87nl/libudev1_258-1_amd64.deb' Downloading dependency 1 of 158: libperl5.40:amd64=5.40.1-6 Downloading dependency 2 of 158: libisl23:amd64=0.27-1 Downloading dependency 3 of 158: gcc-x86-64-linux-gnu:amd64=4:15.2.0-4 Downloading dependency 4 of 158: libncursesw6:amd64=6.5+20250216-2 Downloading dependency 5 of 158: libasan8:amd64=15.2.0-4 Downloading dependency 6 of 158: libgmp10:amd64=2:6.3.0+dfsg-5 Downloading dependency 7 of 158: libdpkg-perl:amd64=1.22.21 Downloading dependency 8 of 158: base-files:amd64=14 Downloading dependency 9 of 158: libbinutils:amd64=2.45-7 Downloading dependency 10 of 158: grep:amd64=3.12-1 Downloading dependency 11 of 158: libpam-modules:amd64=1.7.0-5 Downloading dependency 12 of 158: liblsan0:amd64=15.2.0-4 Downloading dependency 13 of 158: ncurses-base:amd64=6.5+20250216-2 Downloading dependency 14 of 158: python3:amd64=3.13.7-1 Downloading dependency 15 of 158: libarchive-zip-perl:amd64=1.68-1 Downloading dependency 16 of 158: automake:amd64=1:1.17-4 Downloading dependency 17 of 158: libdivsufsort3:amd64=2.0.1-6+b1 Downloading dependency 18 of 158: libgdbm6t64:amd64=1.26-1 Downloading dependency 19 of 158: libatomic1:amd64=15.2.0-4 Downloading dependency 20 of 158: libpam-runtime:amd64=1.7.0-5 Downloading dependency 21 of 158: libaudit1:amd64=1:4.1.2-1 Downloading dependency 22 of 158: libpipeline1:amd64=1.5.8-1 Downloading dependency 23 of 158: libpython3.13-minimal:amd64=3.13.7-1 Downloading dependency 24 of 158: tzdata:amd64=2025b-5 Downloading dependency 25 of 158: mawk:amd64=1.3.4.20250131-1 Downloading dependency 26 of 158: cpp:amd64=4:15.2.0-4 Downloading dependency 27 of 158: cpp-x86-64-linux-gnu:amd64=4:15.2.0-4 Downloading dependency 28 of 158: perl:amd64=5.40.1-6 Downloading dependency 29 of 158: sed:amd64=4.9-2 Downloading dependency 30 of 158: cpp-15:amd64=15.2.0-4 Downloading dependency 31 of 158: tar:amd64=1.35+dfsg-3.1 Downloading dependency 32 of 158: binutils-x86-64-linux-gnu:amd64=2.45-7 Downloading dependency 33 of 158: libpam-modules-bin:amd64=1.7.0-5 Downloading dependency 34 of 158: debianutils:amd64=5.23.2 Downloading dependency 35 of 158: diffutils:amd64=1:3.10-4 Downloading dependency 36 of 158: libsmartcols1:amd64=2.41.2-2 Downloading dependency 37 of 158: perl-modules-5.40:amd64=5.40.1-6 Downloading dependency 38 of 158: debconf:amd64=1.5.91 Downloading dependency 39 of 158: m4:amd64=1.4.20-1 Downloading dependency 40 of 158: liblzma5:amd64=5.8.1-1.1 Downloading dependency 41 of 158: dash:amd64=0.5.12-12 Downloading dependency 42 of 158: libgomp1:amd64=15.2.0-4 Downloading dependency 43 of 158: bsdextrautils:amd64=2.41.2-2 Downloading dependency 44 of 158: libmount1:amd64=2.41.2-2 Downloading dependency 45 of 158: gettext:amd64=0.23.1-2+b1 Downloading dependency 46 of 158: groff-base:amd64=1.23.0-9 Downloading dependency 47 of 158: sysvinit-utils:amd64=3.14-4 Downloading dependency 48 of 158: coreutils:amd64=9.7-3 Downloading dependency 49 of 158: libgprofng0:amd64=2.45-7 Downloading dependency 50 of 158: libblkid1:amd64=2.41.2-2 Downloading dependency 51 of 158: dh-autoreconf:amd64=21 Downloading dependency 52 of 158: libseccomp2:amd64=2.6.0-2 Downloading dependency 53 of 158: libdb5.3t64:amd64=5.3.28+dfsg2-9 Downloading dependency 54 of 158: g++-x86-64-linux-gnu:amd64=4:15.2.0-4 Downloading dependency 55 of 158: libselinux1:amd64=3.8.1-1 Downloading dependency 56 of 158: perl-base:amd64=5.40.1-6 Downloading dependency 57 of 158: dwz:amd64=0.16-2 Downloading dependency 58 of 158: libattr1:amd64=1:2.5.2-3 Downloading dependency 59 of 158: libitm1:amd64=15.2.0-4 Downloading dependency 60 of 158: libacl1:amd64=2.3.2-2+b1 Downloading dependency 61 of 158: libuchardet0:amd64=0.0.8-2 Downloading dependency 62 of 158: libcc1-0:amd64=15.2.0-4 Downloading dependency 63 of 158: libgcc-15-dev:amd64=15.2.0-4 Downloading dependency 64 of 158: libpython3-stdlib:amd64=3.13.7-1 Downloading dependency 65 of 158: libdebconfclient0:amd64=0.280 Downloading dependency 66 of 158: gzip:amd64=1.13-1 Downloading dependency 67 of 158: libgcc-s1:amd64=15.2.0-4 Downloading dependency 68 of 158: libcap2:amd64=1:2.75-10+b1 Downloading dependency 69 of 158: libctf-nobfd0:amd64=2.45-7 Downloading dependency 70 of 158: rpcsvc-proto:amd64=1.4.3-1 Downloading dependency 71 of 158: libmpfr6:amd64=4.2.2-2 Downloading dependency 72 of 158: libaudit-common:amd64=1:4.1.2-1 Downloading dependency 73 of 158: g++:amd64=4:15.2.0-4 Downloading dependency 74 of 158: libunistring5:amd64=1.3-2 Downloading dependency 75 of 158: libubsan1:amd64=15.2.0-4 Downloading dependency 76 of 158: cpp-15-x86-64-linux-gnu:amd64=15.2.0-4 Downloading dependency 77 of 158: dpkg-dev:amd64=1.22.21 Downloading dependency 78 of 158: libhwasan0:amd64=15.2.0-4 Downloading dependency 79 of 158: libuuid1:amd64=2.41.2-2 Downloading dependency 80 of 158: binutils-common:amd64=2.45-7 Downloading dependency 81 of 158: libquadmath0:amd64=15.2.0-4 Downloading dependency 82 of 158: libpcre2-8-0:amd64=10.46-1 Downloading dependency 83 of 158: sensible-utils:amd64=0.0.26 Downloading dependency 84 of 158: python3.13:amd64=3.13.7-1 Downloading dependency 85 of 158: xz-utils:amd64=5.8.1-1.1 Downloading dependency 86 of 158: findutils:amd64=4.10.0-3 Downloading dependency 87 of 158: libtinfo6:amd64=6.5+20250216-2 Downloading dependency 88 of 158: libexpat1:amd64=2.7.3-1 Downloading dependency 89 of 158: patch:amd64=2.8-2 Downloading dependency 90 of 158: hostname:amd64=3.25 Downloading dependency 91 of 158: libc-bin:amd64=2.41-12 Downloading dependency 92 of 158: libctf0:amd64=2.45-7 Downloading dependency 93 of 158: autopoint:amd64=0.23.1-2 Downloading dependency 94 of 158: libsframe2:amd64=2.45-7 Downloading dependency 95 of 158: libgdbm-compat4t64:amd64=1.26-1 Downloading dependency 96 of 158: python3-minimal:amd64=3.13.7-1 Downloading dependency 97 of 158: python3.13-minimal:amd64=3.13.7-1 Downloading dependency 98 of 158: libpython3.13-stdlib:amd64=3.13.7-1 Downloading dependency 99 of 158: dh-strip-nondeterminism:amd64=1.15.0-1 Downloading dependency 100 of 158: libbz2-1.0:amd64=1.0.8-6 Downloading dependency 101 of 158: libmd0:amd64=1.1.0-2+b1 Downloading dependency 102 of 158: gettext-base:amd64=0.23.1-2+b1 Downloading dependency 103 of 158: libc-dev-bin:amd64=2.41-12 Downloading dependency 104 of 158: util-linux:amd64=2.41.2-2 Downloading dependency 105 of 158: linux-libc-dev:amd64=6.16.9-1 Downloading dependency 106 of 158: libdivsufsort-dev:amd64=2.0.1-6+b1 Downloading dependency 107 of 158: g++-15-x86-64-linux-gnu:amd64=15.2.0-4 Downloading dependency 108 of 158: libcrypt-dev:amd64=1:4.4.38-1 Downloading dependency 109 of 158: dpkg:amd64=1.22.21 Downloading dependency 110 of 158: libmagic-mgc:amd64=1:5.46-5 Downloading dependency 111 of 158: libc6-dev:amd64=2.41-12 Downloading dependency 112 of 158: libxml2-16:amd64=2.14.5+dfsg-0.2 Downloading dependency 113 of 158: gcc:amd64=4:15.2.0-4 Downloading dependency 114 of 158: autotools-dev:amd64=20240727.1 Downloading dependency 115 of 158: media-types:amd64=13.0.0 Downloading dependency 116 of 158: base-passwd:amd64=3.6.7 Downloading dependency 117 of 158: bzip2:amd64=1.0.8-6 Downloading dependency 118 of 158: file:amd64=1:5.46-5 Downloading dependency 119 of 158: libreadline8t64:amd64=8.3-3 Downloading dependency 120 of 158: libstdc++6:amd64=15.2.0-4 Downloading dependency 121 of 158: libelf1t64:amd64=0.193-3 Downloading dependency 122 of 158: libtsan2:amd64=15.2.0-4 Downloading dependency 123 of 158: gcc-15-x86-64-linux-gnu:amd64=15.2.0-4 Downloading dependency 124 of 158: libstdc++-15-dev:amd64=15.2.0-4 Downloading dependency 125 of 158: libjansson4:amd64=2.14-2+b3 Downloading dependency 126 of 158: libpam0g:amd64=1.7.0-5 Downloading dependency 127 of 158: libc6:amd64=2.41-12 Downloading dependency 128 of 158: zlib1g:amd64=1:1.3.dfsg+really1.3.1-1+b1 Downloading dependency 129 of 158: intltool-debian:amd64=0.35.0+20060710.6 Downloading dependency 130 of 158: libssl3t64:amd64=3.5.3-1 Downloading dependency 131 of 158: gcc-15-base:amd64=15.2.0-4 Downloading dependency 132 of 158: gcc-15:amd64=15.2.0-4 Downloading dependency 133 of 158: binutils:amd64=2.45-7 Downloading dependency 134 of 158: libudev1:amd64=258-1 Downloading dependency 135 of 158: libcap-ng0:amd64=0.8.5-4+b1Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libcap-ng0 amd64 0.8.5-4+b1 [17.6 kB] Fetched 17.6 kB in 0s (980 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5272qcnp/libcap-ng0_0.8.5-4+b1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libsystemd0 amd64 258-1 [466 kB] Fetched 466 kB in 0s (37.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpinifhq3n/libsystemd0_258-1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 man-db amd64 2.13.1-1 [1469 kB] Fetched 1469 kB in 0s (68.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpeuto7f4d/man-db_2.13.1-1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 autoconf all 2.72-3.1 [494 kB] Fetched 494 kB in 0s (3891 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmofhdicu/autoconf_2.72-3.1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 bash amd64 5.3-1 [1556 kB] Fetched 1556 kB in 0s (24.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprvsf8l00/bash_5.3-1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libmpc3 amd64 1.3.1-2 [55.8 kB] Fetched 55.8 kB in 0s (5445 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsjmu3ifu/libmpc3_1.3.1-2_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libsqlite3-0 amd64 3.46.1-8 [968 kB] Fetched 968 kB in 0s (32.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbpsmaja1/libsqlite3-0_3.46.1-8_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libtool all 2.5.4-5 [540 kB] Fetched 540 kB in 0s (42.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9tsn22c5/libtool_2.5.4-5_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libzstd1 amd64 1.5.7+dfsg-1.1 [320 kB] Fetched 320 kB in 0s (25.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9avsuy11/libzstd1_1.5.7+dfsg-1.1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 openssl-provider-legacy amd64 3.5.3-1 [308 kB] Fetched 308 kB in 0s (25.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9ighz62f/openssl-provider-legacy_3.5.3-1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libcrypt1 amd64 1:4.4.38-1 [90.1 kB] Fetched 90.1 kB in 0s (8045 kB/s) dpkg-name: info: moved 'libcrypt1_1%3a4.4.38-1_amd64.deb' to '/srv/rebuilderd/tmp/tmpwef0dprj/libcrypt1_4.4.38-1_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 debhelper all 13.28 [941 kB] Fetched 941 kB in 0s (35.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpi70wj1ch/debhelper_13.28_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Fetched 248 kB in 0s (20.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpprsfqcv9/po-debconf_1.0.21+nmu1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 make amd64 4.4.1-2 [463 kB] Fetched 463 kB in 0s (19.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1vpa5glh/make_4.4.1-2_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 ncurses-bin amd64 6.5+20250216-2 [438 kB] Fetched 438 kB in 0s (36.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqm8tj8yc/ncurses-bin_6.5+20250216-2_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 readline-common all 8.3-3 [74.8 kB] Fetched 74.8 kB in 0s (7389 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3g2nybfw/readline-common_8.3-3_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 g++-15 amd64 15.2.0-4 [23.4 kB] Fetched 23.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx42gjw3a/g++-15_15.2.0-4_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libfile-stripnondeterminism-perl all 1.15.0-1 [19.9 kB] Fetched 19.9 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_dix0296/libfile-stripnondeterminism-perl_1.15.0-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libmagic1t64 amd64 1:5.46-5 [109 kB] Fetched 109 kB in 0s (10.1 MB/s) dpkg-name: info: moved 'libmagic1t64_1%3a5.46-5_amd64.deb' to '/srv/rebuilderd/tmp/tmpm0f3wj7m/libmagic1t64_5.46-5_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 netbase all 6.5 [12.4 kB] Fetched 12.4 kB in 0s (1238 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl_rcc8lk/netbase_6.5_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 init-system-helpers all 1.69 [39.3 kB] Fetched 39.3 kB in 0s (3865 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmp1loy27/init-system-helpers_1.69_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 build-essential amd64 12.12 [4624 B] Fetched 4624 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0gf79aty/build-essential_12.12_amd64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libdebhelper-perl all 13.28 [92.4 kB] Fetched 92.4 kB in 0s (8791 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpol5bu4mk/libdebhelper-perl_13.28_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250929T085637Z sid/main amd64 libffi8 amd64 3.5.2-2 [25.5 kB] Fetched 25.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjex60c3w/libffi8_3.5.2-2_amd64.deb' dpkg-buildpackage: info: source package debootsnap-dummy dpkg-buildpackage: info: source version 1.0 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Equivs Dummy Package Generator dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/debootsnap-dummy/ dh_install dh_installdocs dh_installchangelogs dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'debootsnap-dummy' in '../debootsnap-dummy_1.0_all.deb'. dpkg-genbuildinfo --build=binary -O../debootsnap-dummy_1.0_amd64.buildinfo dpkg-genchanges --build=binary -O../debootsnap-dummy_1.0_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) The package has been created. Attention, the package has been created in the /srv/rebuilderd/tmp/tmp_vjp56z0/cache directory, not in ".." as indicated by the message above! I: automatically chosen mode: unshare I: chroot architecture amd64 is equal to the host's architecture I: using /srv/rebuilderd/tmp/mmdebstrap.Y0_U8PoZ3P as tempdir I: running --setup-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/setup00.sh /srv/rebuilderd/tmp/mmdebstrap.Y0_U8PoZ3P 127.0.0.1 - - [11/Oct/2025 17:18:19] code 404, message File not found 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./InRelease HTTP/1.1" 404 - Ign:1 http://localhost:34763 ./ InRelease 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./Release HTTP/1.1" 200 - Get:2 http://localhost:34763 ./ Release [462 B] 127.0.0.1 - - [11/Oct/2025 17:18:19] code 404, message File not found 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./Release.gpg HTTP/1.1" 404 - Ign:3 http://localhost:34763 ./ Release.gpg 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./Packages HTTP/1.1" 200 - Get:4 http://localhost:34763 ./ Packages [193 kB] Fetched 194 kB in 0s (9693 kB/s) Reading package lists... usr-is-merged found but not real -- not running merged-usr setup hook I: skipping apt-get update because it was already run I: downloading packages with apt... 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./gcc-15-base_15.2.0-4_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./libc6_2.41-12_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./libgcc-s1_15.2.0-4_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./mawk_1.3.4.20250131-1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./base-files_14_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./libtinfo6_6.5%2b20250216-2_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./debianutils_5.23.2_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./bash_5.3-1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./libacl1_2.3.2-2%2bb1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./libattr1_2.5.2-3_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./libcap2_2.75-10%2bb1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./libgmp10_6.3.0%2bdfsg-5_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./libpcre2-8-0_10.46-1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./libselinux1_3.8.1-1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./libzstd1_1.5.7%2bdfsg-1.1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./zlib1g_1.3.dfsg%2breally1.3.1-1%2bb1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./libssl3t64_3.5.3-1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./openssl-provider-legacy_3.5.3-1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./libsystemd0_258-1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./coreutils_9.7-3_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./dash_0.5.12-12_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./diffutils_3.10-4_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./libbz2-1.0_1.0.8-6_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./liblzma5_5.8.1-1.1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./libmd0_1.1.0-2%2bb1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./tar_1.35%2bdfsg-3.1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./dpkg_1.22.21_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./findutils_4.10.0-3_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./grep_3.12-1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./gzip_1.13-1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./hostname_3.25_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./ncurses-bin_6.5%2b20250216-2_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./libcrypt1_4.4.38-1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./perl-base_5.40.1-6_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./sed_4.9-2_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./libaudit-common_4.1.2-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./libcap-ng0_0.8.5-4%2bb1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./libaudit1_4.1.2-1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./libdb5.3t64_5.3.28%2bdfsg2-9_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./debconf_1.5.91_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./libpam0g_1.7.0-5_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./libpam-modules-bin_1.7.0-5_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./libpam-modules_1.7.0-5_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./libpam-runtime_1.7.0-5_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./libblkid1_2.41.2-2_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./libmount1_2.41.2-2_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./libsmartcols1_2.41.2-2_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./libudev1_258-1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./libuuid1_2.41.2-2_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./util-linux_2.41.2-2_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./libdebconfclient0_0.280_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./base-passwd_3.6.7_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./init-system-helpers_1.69_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./libc-bin_2.41-12_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./ncurses-base_6.5%2b20250216-2_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:19] "GET /./sysvinit-utils_3.14-4_amd64.deb HTTP/1.1" 200 - I: extracting archives... I: running --extract-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/extract00.sh /srv/rebuilderd/tmp/mmdebstrap.Y0_U8PoZ3P 127.0.0.1 - - [11/Oct/2025 17:18:21] code 404, message File not found 127.0.0.1 - - [11/Oct/2025 17:18:21] "GET /./InRelease HTTP/1.1" 404 - Ign:1 http://localhost:34763 ./ InRelease 127.0.0.1 - - [11/Oct/2025 17:18:21] "GET /./Release HTTP/1.1" 304 - Hit:2 http://localhost:34763 ./ Release 127.0.0.1 - - [11/Oct/2025 17:18:21] code 404, message File not found 127.0.0.1 - - [11/Oct/2025 17:18:21] "GET /./Release.gpg HTTP/1.1" 404 - Ign:3 http://localhost:34763 ./ Release.gpg Reading package lists... usr-is-merged found but not real -- not running merged-usr extract hook I: installing essential packages... I: running --essential-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/essential00.sh /srv/rebuilderd/tmp/mmdebstrap.Y0_U8PoZ3P usr-is-merged was not installed in a previous hook -- not running merged-usr essential hook I: installing remaining packages inside the chroot... 127.0.0.1 - - [11/Oct/2025 17:18:35] "GET /./libexpat1_2.7.3-1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:35] "GET /./libpython3.13-minimal_3.13.7-1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:35] "GET /./python3.13-minimal_3.13.7-1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:35] "GET /./python3-minimal_3.13.7-1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:35] "GET /./media-types_13.0.0_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:35] "GET /./netbase_6.5_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:35] "GET /./tzdata_2025b-5_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:35] "GET /./libffi8_3.5.2-2_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:35] "GET /./libncursesw6_6.5%2b20250216-2_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:35] "GET /./readline-common_8.3-3_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:35] "GET /./libreadline8t64_8.3-3_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:35] "GET /./libsqlite3-0_3.46.1-8_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:35] "GET /./libpython3.13-stdlib_3.13.7-1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:35] "GET /./python3.13_3.13.7-1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:35] "GET /./libpython3-stdlib_3.13.7-1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:35] "GET /./python3_3.13.7-1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:35] "GET /./sensible-utils_0.0.26_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:35] "GET /./libstdc%2b%2b6_15.2.0-4_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:35] "GET /./libuchardet0_0.0.8-2_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:35] "GET /./groff-base_1.23.0-9_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:35] "GET /./bsdextrautils_2.41.2-2_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:35] "GET /./libgdbm6t64_1.26-1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:35] "GET /./libpipeline1_1.5.8-1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:35] "GET /./libseccomp2_2.6.0-2_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:35] "GET /./man-db_2.13.1-1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:35] "GET /./bzip2_1.0.8-6_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:35] "GET /./libmagic-mgc_5.46-5_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:35] "GET /./libmagic1t64_5.46-5_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:35] "GET /./file_5.46-5_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:35] "GET /./gettext-base_0.23.1-2%2bb1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:35] "GET /./perl-modules-5.40_5.40.1-6_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:35] "GET /./libgdbm-compat4t64_1.26-1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:35] "GET /./libperl5.40_5.40.1-6_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:35] "GET /./perl_5.40.1-6_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:35] "GET /./xz-utils_5.8.1-1.1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:35] "GET /./m4_1.4.20-1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:35] "GET /./autoconf_2.72-3.1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:35] "GET /./autotools-dev_20240727.1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:35] "GET /./automake_1.17-4_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:35] "GET /./autopoint_0.23.1-2_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:35] "GET /./libsframe2_2.45-7_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:35] "GET /./binutils-common_2.45-7_amd64.deb HTTP/1.1" 200 - 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127.0.0.1 - - [11/Oct/2025 17:18:38] "GET /./libdebhelper-perl_13.28_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:38] "GET /./libtool_2.5.4-5_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:38] "GET /./dh-autoreconf_21_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:38] "GET /./libarchive-zip-perl_1.68-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:38] "GET /./libfile-stripnondeterminism-perl_1.15.0-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:38] "GET /./dh-strip-nondeterminism_1.15.0-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:38] "GET /./libelf1t64_0.193-3_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:38] "GET /./dwz_0.16-2_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:38] "GET /./libunistring5_1.3-2_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:38] "GET /./libxml2-16_2.14.5%2bdfsg-0.2_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:38] "GET /./gettext_0.23.1-2%2bb1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:38] "GET /./intltool-debian_0.35.0%2b20060710.6_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:38] "GET /./po-debconf_1.0.21%2bnmu1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:38] "GET /./debhelper_13.28_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:38] "GET /./libdivsufsort3_2.0.1-6%2bb1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:38] "GET /./libdivsufsort-dev_2.0.1-6%2bb1_amd64.deb HTTP/1.1" 200 - 127.0.0.1 - - [11/Oct/2025 17:18:38] "GET /./debootsnap-dummy_1.0_all.deb HTTP/1.1" 200 - I: running --customize-hook directly: /srv/rebuilderd/tmp/tmp_vjp56z0/apt_install.sh /srv/rebuilderd/tmp/mmdebstrap.Y0_U8PoZ3P Reading package lists... Building dependency tree... Reading state information... libperl5.40 is already the newest version (5.40.1-6). libperl5.40 set to manually installed. libisl23 is already the newest version (0.27-1). libisl23 set to manually installed. gcc-x86-64-linux-gnu is already the newest version (4:15.2.0-4). gcc-x86-64-linux-gnu set to manually installed. libncursesw6 is already the newest version (6.5+20250216-2). libncursesw6 set to manually installed. libasan8 is already the newest version (15.2.0-4). libasan8 set to manually installed. libgmp10 is already the newest version (2:6.3.0+dfsg-5). libdpkg-perl is already the newest version (1.22.21). libdpkg-perl set to manually installed. base-files is already the newest version (14). libbinutils is already the newest version (2.45-7). libbinutils set to manually installed. grep is already the newest version (3.12-1). libpam-modules is already the newest version (1.7.0-5). liblsan0 is already the newest version (15.2.0-4). liblsan0 set to manually installed. ncurses-base is already the newest version (6.5+20250216-2). python3 is already the newest version (3.13.7-1). python3 set to manually installed. libarchive-zip-perl is already the newest version (1.68-1). libarchive-zip-perl set to manually installed. automake is already the newest version (1:1.17-4). automake set to manually installed. libdivsufsort3 is already the newest version (2.0.1-6+b1). libdivsufsort3 set to manually installed. libgdbm6t64 is already the newest version (1.26-1). libgdbm6t64 set to manually installed. libatomic1 is already the newest version (15.2.0-4). libatomic1 set to manually installed. libpam-runtime is already the newest version (1.7.0-5). libaudit1 is already the newest version (1:4.1.2-1). libpipeline1 is already the newest version (1.5.8-1). libpipeline1 set to manually installed. libpython3.13-minimal is already the newest version (3.13.7-1). libpython3.13-minimal set to manually installed. tzdata is already the newest version (2025b-5). tzdata set to manually installed. mawk is already the newest version (1.3.4.20250131-1). cpp is already the newest version (4:15.2.0-4). cpp set to manually installed. cpp-x86-64-linux-gnu is already the newest version (4:15.2.0-4). cpp-x86-64-linux-gnu set to manually installed. perl is already the newest version (5.40.1-6). perl set to manually installed. sed is already the newest version (4.9-2). cpp-15 is already the newest version (15.2.0-4). cpp-15 set to manually installed. tar is already the newest version (1.35+dfsg-3.1). binutils-x86-64-linux-gnu is already the newest version (2.45-7). binutils-x86-64-linux-gnu set to manually installed. libpam-modules-bin is already the newest version (1.7.0-5). debianutils is already the newest version (5.23.2). diffutils is already the newest version (1:3.10-4). libsmartcols1 is already the newest version (2.41.2-2). perl-modules-5.40 is already the newest version (5.40.1-6). perl-modules-5.40 set to manually installed. debconf is already the newest version (1.5.91). m4 is already the newest version (1.4.20-1). m4 set to manually installed. liblzma5 is already the newest version (5.8.1-1.1). dash is already the newest version (0.5.12-12). libgomp1 is already the newest version (15.2.0-4). libgomp1 set to manually installed. bsdextrautils is already the newest version (2.41.2-2). bsdextrautils set to manually installed. libmount1 is already the newest version (2.41.2-2). gettext is already the newest version (0.23.1-2+b1). gettext set to manually installed. groff-base is already the newest version (1.23.0-9). groff-base set to manually installed. sysvinit-utils is already the newest version (3.14-4). coreutils is already the newest version (9.7-3). libgprofng0 is already the newest version (2.45-7). libgprofng0 set to manually installed. libblkid1 is already the newest version (2.41.2-2). dh-autoreconf is already the newest version (21). dh-autoreconf set to manually installed. libseccomp2 is already the newest version (2.6.0-2). libseccomp2 set to manually installed. libdb5.3t64 is already the newest version (5.3.28+dfsg2-9). g++-x86-64-linux-gnu is already the newest version (4:15.2.0-4). g++-x86-64-linux-gnu set to manually installed. libselinux1 is already the newest version (3.8.1-1). perl-base is already the newest version (5.40.1-6). dwz is already the newest version (0.16-2). dwz set to manually installed. libattr1 is already the newest version (1:2.5.2-3). libitm1 is already the newest version (15.2.0-4). libitm1 set to manually installed. libacl1 is already the newest version (2.3.2-2+b1). libuchardet0 is already the newest version (0.0.8-2). libuchardet0 set to manually installed. libcc1-0 is already the newest version (15.2.0-4). libcc1-0 set to manually installed. libgcc-15-dev is already the newest version (15.2.0-4). libgcc-15-dev set to manually installed. libpython3-stdlib is already the newest version (3.13.7-1). libpython3-stdlib set to manually installed. libdebconfclient0 is already the newest version (0.280). gzip is already the newest version (1.13-1). libgcc-s1 is already the newest version (15.2.0-4). libcap2 is already the newest version (1:2.75-10+b1). libctf-nobfd0 is already the newest version (2.45-7). libctf-nobfd0 set to manually installed. rpcsvc-proto is already the newest version (1.4.3-1). rpcsvc-proto set to manually installed. libmpfr6 is already the newest version (4.2.2-2). libmpfr6 set to manually installed. libaudit-common is already the newest version (1:4.1.2-1). g++ is already the newest version (4:15.2.0-4). g++ set to manually installed. libunistring5 is already the newest version (1.3-2). libunistring5 set to manually installed. libubsan1 is already the newest version (15.2.0-4). libubsan1 set to manually installed. cpp-15-x86-64-linux-gnu is already the newest version (15.2.0-4). cpp-15-x86-64-linux-gnu set to manually installed. dpkg-dev is already the newest version (1.22.21). dpkg-dev set to manually installed. libhwasan0 is already the newest version (15.2.0-4). libhwasan0 set to manually installed. libuuid1 is already the newest version (2.41.2-2). binutils-common is already the newest version (2.45-7). binutils-common set to manually installed. libquadmath0 is already the newest version (15.2.0-4). libquadmath0 set to manually installed. libpcre2-8-0 is already the newest version (10.46-1). sensible-utils is already the newest version (0.0.26). sensible-utils set to manually installed. python3.13 is already the newest version (3.13.7-1). python3.13 set to manually installed. xz-utils is already the newest version (5.8.1-1.1). xz-utils set to manually installed. findutils is already the newest version (4.10.0-3). libtinfo6 is already the newest version (6.5+20250216-2). libexpat1 is already the newest version (2.7.3-1). libexpat1 set to manually installed. patch is already the newest version (2.8-2). patch set to manually installed. hostname is already the newest version (3.25). libc-bin is already the newest version (2.41-12). libctf0 is already the newest version (2.45-7). libctf0 set to manually installed. autopoint is already the newest version (0.23.1-2). autopoint set to manually installed. libsframe2 is already the newest version (2.45-7). libsframe2 set to manually installed. libgdbm-compat4t64 is already the newest version (1.26-1). libgdbm-compat4t64 set to manually installed. python3-minimal is already the newest version (3.13.7-1). python3-minimal set to manually installed. python3.13-minimal is already the newest version (3.13.7-1). python3.13-minimal set to manually installed. libpython3.13-stdlib is already the newest version (3.13.7-1). libpython3.13-stdlib set to manually installed. dh-strip-nondeterminism is already the newest version (1.15.0-1). dh-strip-nondeterminism set to manually installed. libbz2-1.0 is already the newest version (1.0.8-6). libmd0 is already the newest version (1.1.0-2+b1). gettext-base is already the newest version (0.23.1-2+b1). gettext-base set to manually installed. libc-dev-bin is already the newest version (2.41-12). libc-dev-bin set to manually installed. util-linux is already the newest version (2.41.2-2). linux-libc-dev is already the newest version (6.16.9-1). linux-libc-dev set to manually installed. libdivsufsort-dev is already the newest version (2.0.1-6+b1). libdivsufsort-dev set to manually installed. g++-15-x86-64-linux-gnu is already the newest version (15.2.0-4). g++-15-x86-64-linux-gnu set to manually installed. libcrypt-dev is already the newest version (1:4.4.38-1). libcrypt-dev set to manually installed. dpkg is already the newest version (1.22.21). libmagic-mgc is already the newest version (1:5.46-5). libmagic-mgc set to manually installed. libc6-dev is already the newest version (2.41-12). libc6-dev set to manually installed. libxml2-16 is already the newest version (2.14.5+dfsg-0.2). libxml2-16 set to manually installed. gcc is already the newest version (4:15.2.0-4). gcc set to manually installed. autotools-dev is already the newest version (20240727.1). autotools-dev set to manually installed. media-types is already the newest version (13.0.0). media-types set to manually installed. base-passwd is already the newest version (3.6.7). bzip2 is already the newest version (1.0.8-6). bzip2 set to manually installed. file is already the newest version (1:5.46-5). file set to manually installed. libreadline8t64 is already the newest version (8.3-3). libreadline8t64 set to manually installed. libstdc++6 is already the newest version (15.2.0-4). libstdc++6 set to manually installed. libelf1t64 is already the newest version (0.193-3). libelf1t64 set to manually installed. libtsan2 is already the newest version (15.2.0-4). libtsan2 set to manually installed. gcc-15-x86-64-linux-gnu is already the newest version (15.2.0-4). gcc-15-x86-64-linux-gnu set to manually installed. libstdc++-15-dev is already the newest version (15.2.0-4). libstdc++-15-dev set to manually installed. libjansson4 is already the newest version (2.14-2+b3). libjansson4 set to manually installed. libpam0g is already the newest version (1.7.0-5). libc6 is already the newest version (2.41-12). zlib1g is already the newest version (1:1.3.dfsg+really1.3.1-1+b1). intltool-debian is already the newest version (0.35.0+20060710.6). intltool-debian set to manually installed. libssl3t64 is already the newest version (3.5.3-1). gcc-15-base is already the newest version (15.2.0-4). gcc-15 is already the newest version (15.2.0-4). gcc-15 set to manually installed. binutils is already the newest version (2.45-7). binutils set to manually installed. libudev1 is already the newest version (258-1). libcap-ng0 is already the newest version (0.8.5-4+b1). libsystemd0 is already the newest version (258-1). man-db is already the newest version (2.13.1-1). man-db set to manually installed. autoconf is already the newest version (2.72-3.1). autoconf set to manually installed. bash is already the newest version (5.3-1). libmpc3 is already the newest version (1.3.1-2). libmpc3 set to manually installed. libsqlite3-0 is already the newest version (3.46.1-8). libsqlite3-0 set to manually installed. libtool is already the newest version (2.5.4-5). libtool set to manually installed. libzstd1 is already the newest version (1.5.7+dfsg-1.1). openssl-provider-legacy is already the newest version (3.5.3-1). libcrypt1 is already the newest version (1:4.4.38-1). debhelper is already the newest version (13.28). debhelper set to manually installed. po-debconf is already the newest version (1.0.21+nmu1). po-debconf set to manually installed. make is already the newest version (4.4.1-2). make set to manually installed. ncurses-bin is already the newest version (6.5+20250216-2). readline-common is already the newest version (8.3-3). readline-common set to manually installed. g++-15 is already the newest version (15.2.0-4). g++-15 set to manually installed. libfile-stripnondeterminism-perl is already the newest version (1.15.0-1). libfile-stripnondeterminism-perl set to manually installed. libmagic1t64 is already the newest version (1:5.46-5). libmagic1t64 set to manually installed. netbase is already the newest version (6.5). netbase set to manually installed. init-system-helpers is already the newest version (1.69). build-essential is already the newest version (12.12). build-essential set to manually installed. libdebhelper-perl is already the newest version (13.28). libdebhelper-perl set to manually installed. libffi8 is already the newest version (3.5.2-2). libffi8 set to manually installed. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: running --customize-hook in shell: sh -c 'chroot "$1" dpkg -r debootsnap-dummy' exec /srv/rebuilderd/tmp/mmdebstrap.Y0_U8PoZ3P (Reading database ... 14841 files and directories currently installed.) Removing debootsnap-dummy (1.0) ... I: running --customize-hook in shell: sh -c 'chroot "$1" dpkg-query --showformat '${binary:Package}=${Version}\n' --show > "$1/pkglist"' exec /srv/rebuilderd/tmp/mmdebstrap.Y0_U8PoZ3P I: running special hook: download /pkglist ./pkglist I: running --customize-hook in shell: sh -c 'rm "$1/pkglist"' exec /srv/rebuilderd/tmp/mmdebstrap.Y0_U8PoZ3P I: running special hook: upload sources.list /etc/apt/sources.list I: waiting for background processes to finish... I: cleaning package lists and apt cache... I: skipping cleanup/reproducible as requested I: creating tarball... I: done I: removing tempdir /srv/rebuilderd/tmp/mmdebstrap.Y0_U8PoZ3P... I: success in 52.9616 seconds Downloading dependency 136 of 158: libsystemd0:amd64=258-1 Downloading dependency 137 of 158: man-db:amd64=2.13.1-1 Downloading dependency 138 of 158: autoconf:amd64=2.72-3.1 Downloading dependency 139 of 158: bash:amd64=5.3-1 Downloading dependency 140 of 158: libmpc3:amd64=1.3.1-2 Downloading dependency 141 of 158: libsqlite3-0:amd64=3.46.1-8 Downloading dependency 142 of 158: libtool:amd64=2.5.4-5 Downloading dependency 143 of 158: libzstd1:amd64=1.5.7+dfsg-1.1 Downloading dependency 144 of 158: openssl-provider-legacy:amd64=3.5.3-1 Downloading dependency 145 of 158: libcrypt1:amd64=1:4.4.38-1 Downloading dependency 146 of 158: debhelper:amd64=13.28 Downloading dependency 147 of 158: po-debconf:amd64=1.0.21+nmu1 Downloading dependency 148 of 158: make:amd64=4.4.1-2 Downloading dependency 149 of 158: ncurses-bin:amd64=6.5+20250216-2 Downloading dependency 150 of 158: readline-common:amd64=8.3-3 Downloading dependency 151 of 158: g++-15:amd64=15.2.0-4 Downloading dependency 152 of 158: libfile-stripnondeterminism-perl:amd64=1.15.0-1 Downloading dependency 153 of 158: libmagic1t64:amd64=1:5.46-5 Downloading dependency 154 of 158: netbase:amd64=6.5 Downloading dependency 155 of 158: init-system-helpers:amd64=1.69 Downloading dependency 156 of 158: build-essential:amd64=12.12 Downloading dependency 157 of 158: libdebhelper-perl:amd64=13.28 Downloading dependency 158 of 158: libffi8:amd64=3.5.2-2 env --chdir=/srv/rebuilderd/tmp/rebuilderdf83S52/out DEB_BUILD_OPTIONS=parallel=6 LANG=C.UTF-8 LC_COLLATE=C.UTF-8 LC_CTYPE=C.UTF-8 SOURCE_DATE_EPOCH=1759149900 SBUILD_CONFIG=/srv/rebuilderd/tmp/debrebuildK25USs/debrebuild.sbuildrc.m1B5Joh7lB0x sbuild --build=amd64 --host=amd64 --no-source --arch-any --no-arch-all --chroot=/srv/rebuilderd/tmp/debrebuildK25USs/debrebuild.tar.z0shclBaIlrR --chroot-mode=unshare --dist=unstable --no-run-lintian --no-run-piuparts --no-run-autopkgtest --no-apt-update --no-apt-upgrade --no-apt-distupgrade --verbose --nolog --bd-uninstallable-explainer= --build-path=/build/reproducible-path --dsc-dir=hmmer-3.4+dfsg /srv/rebuilderd/tmp/rebuilderdf83S52/inputs/hmmer_3.4+dfsg-3.dsc I: consider moving your ~/.sbuildrc to /srv/rebuilderd/.config/sbuild/config.pl The Debian buildds switched to the "unshare" backend and sbuild will default to it in the future. To start using "unshare" add this to your `~/.config/sbuild/config.pl`: $chroot_mode = "unshare"; If you want to keep the old "schroot" mode even in the future, add the following to your `~/.config/sbuild/config.pl`: $chroot_mode = "schroot"; $schroot = "schroot"; sbuild (Debian sbuild) 0.89.3+deb13u1 (16 August 2025) on osuosl43-amd64.novalocal +==============================================================================+ | hmmer 3.4+dfsg-3 (amd64) Sat, 11 Oct 2025 17:19:13 +0000 | +==============================================================================+ Package: hmmer Version: 3.4+dfsg-3 Source Version: 3.4+dfsg-3 Distribution: unstable Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 Build Type: any I: No tarballs found in /srv/rebuilderd/.cache/sbuild I: Unpacking /srv/rebuilderd/tmp/debrebuildK25USs/debrebuild.tar.z0shclBaIlrR to /srv/rebuilderd/tmp/tmp.sbuild.d6lCvmUxZK... I: Setting up the chroot... I: Creating chroot session... I: Setting up log color... I: Setting up apt archive... +------------------------------------------------------------------------------+ | Fetch source files Sat, 11 Oct 2025 17:19:19 +0000 | +------------------------------------------------------------------------------+ Local sources ------------- /srv/rebuilderd/tmp/rebuilderdf83S52/inputs/hmmer_3.4+dfsg-3.dsc exists in /srv/rebuilderd/tmp/rebuilderdf83S52/inputs; copying to chroot +------------------------------------------------------------------------------+ | Install package build dependencies Sat, 11 Oct 2025 17:19:21 +0000 | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), libdivsufsort-dev, python3, build-essential Filtered Build-Depends: debhelper-compat (= 13), libdivsufsort-dev, python3, build-essential dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/build/reproducible-path/resolver-4gcCgM/apt_archive/sbuild-build-depends-main-dummy.deb'. Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies +------------------------------------------------------------------------------+ | Check architectures Sat, 11 Oct 2025 17:19:25 +0000 | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in any all) +------------------------------------------------------------------------------+ | Build environment Sat, 11 Oct 2025 17:19:25 +0000 | +------------------------------------------------------------------------------+ Kernel: Linux 6.12.48+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.48-1 (2025-09-20) amd64 (x86_64) Toolchain package versions: binutils_2.45-7 dpkg-dev_1.22.21 g++-15_15.2.0-4 gcc-15_15.2.0-4 libc6-dev_2.41-12 libstdc++-15-dev_15.2.0-4 libstdc++6_15.2.0-4 linux-libc-dev_6.16.9-1 Package versions: autoconf_2.72-3.1 automake_1:1.17-4 autopoint_0.23.1-2 autotools-dev_20240727.1 base-files_14 base-passwd_3.6.7 bash_5.3-1 binutils_2.45-7 binutils-common_2.45-7 binutils-x86-64-linux-gnu_2.45-7 bsdextrautils_2.41.2-2 build-essential_12.12 bzip2_1.0.8-6 coreutils_9.7-3 cpp_4:15.2.0-4 cpp-15_15.2.0-4 cpp-15-x86-64-linux-gnu_15.2.0-4 cpp-x86-64-linux-gnu_4:15.2.0-4 dash_0.5.12-12 debconf_1.5.91 debhelper_13.28 debianutils_5.23.2 dh-autoreconf_21 dh-strip-nondeterminism_1.15.0-1 diffutils_1:3.10-4 dpkg_1.22.21 dpkg-dev_1.22.21 dwz_0.16-2 file_1:5.46-5 findutils_4.10.0-3 g++_4:15.2.0-4 g++-15_15.2.0-4 g++-15-x86-64-linux-gnu_15.2.0-4 g++-x86-64-linux-gnu_4:15.2.0-4 gcc_4:15.2.0-4 gcc-15_15.2.0-4 gcc-15-base_15.2.0-4 gcc-15-x86-64-linux-gnu_15.2.0-4 gcc-x86-64-linux-gnu_4:15.2.0-4 gettext_0.23.1-2+b1 gettext-base_0.23.1-2+b1 grep_3.12-1 groff-base_1.23.0-9 gzip_1.13-1 hostname_3.25 init-system-helpers_1.69 intltool-debian_0.35.0+20060710.6 libacl1_2.3.2-2+b1 libarchive-zip-perl_1.68-1 libasan8_15.2.0-4 libatomic1_15.2.0-4 libattr1_1:2.5.2-3 libaudit-common_1:4.1.2-1 libaudit1_1:4.1.2-1 libbinutils_2.45-7 libblkid1_2.41.2-2 libbz2-1.0_1.0.8-6 libc-bin_2.41-12 libc-dev-bin_2.41-12 libc6_2.41-12 libc6-dev_2.41-12 libcap-ng0_0.8.5-4+b1 libcap2_1:2.75-10+b1 libcc1-0_15.2.0-4 libcrypt-dev_1:4.4.38-1 libcrypt1_1:4.4.38-1 libctf-nobfd0_2.45-7 libctf0_2.45-7 libdb5.3t64_5.3.28+dfsg2-9 libdebconfclient0_0.280 libdebhelper-perl_13.28 libdivsufsort-dev_2.0.1-6+b1 libdivsufsort3_2.0.1-6+b1 libdpkg-perl_1.22.21 libelf1t64_0.193-3 libexpat1_2.7.3-1 libffi8_3.5.2-2 libfile-stripnondeterminism-perl_1.15.0-1 libgcc-15-dev_15.2.0-4 libgcc-s1_15.2.0-4 libgdbm-compat4t64_1.26-1 libgdbm6t64_1.26-1 libgmp10_2:6.3.0+dfsg-5 libgomp1_15.2.0-4 libgprofng0_2.45-7 libhwasan0_15.2.0-4 libisl23_0.27-1 libitm1_15.2.0-4 libjansson4_2.14-2+b3 liblsan0_15.2.0-4 liblzma5_5.8.1-1.1 libmagic-mgc_1:5.46-5 libmagic1t64_1:5.46-5 libmd0_1.1.0-2+b1 libmount1_2.41.2-2 libmpc3_1.3.1-2 libmpfr6_4.2.2-2 libncursesw6_6.5+20250216-2 libpam-modules_1.7.0-5 libpam-modules-bin_1.7.0-5 libpam-runtime_1.7.0-5 libpam0g_1.7.0-5 libpcre2-8-0_10.46-1 libperl5.40_5.40.1-6 libpipeline1_1.5.8-1 libpython3-stdlib_3.13.7-1 libpython3.13-minimal_3.13.7-1 libpython3.13-stdlib_3.13.7-1 libquadmath0_15.2.0-4 libreadline8t64_8.3-3 libseccomp2_2.6.0-2 libselinux1_3.8.1-1 libsframe2_2.45-7 libsmartcols1_2.41.2-2 libsqlite3-0_3.46.1-8 libssl3t64_3.5.3-1 libstdc++-15-dev_15.2.0-4 libstdc++6_15.2.0-4 libsystemd0_258-1 libtinfo6_6.5+20250216-2 libtool_2.5.4-5 libtsan2_15.2.0-4 libubsan1_15.2.0-4 libuchardet0_0.0.8-2 libudev1_258-1 libunistring5_1.3-2 libuuid1_2.41.2-2 libxml2-16_2.14.5+dfsg-0.2 libzstd1_1.5.7+dfsg-1.1 linux-libc-dev_6.16.9-1 m4_1.4.20-1 make_4.4.1-2 man-db_2.13.1-1 mawk_1.3.4.20250131-1 media-types_13.0.0 ncurses-base_6.5+20250216-2 ncurses-bin_6.5+20250216-2 netbase_6.5 openssl-provider-legacy_3.5.3-1 patch_2.8-2 perl_5.40.1-6 perl-base_5.40.1-6 perl-modules-5.40_5.40.1-6 po-debconf_1.0.21+nmu1 python3_3.13.7-1 python3-minimal_3.13.7-1 python3.13_3.13.7-1 python3.13-minimal_3.13.7-1 readline-common_8.3-3 rpcsvc-proto_1.4.3-1 sed_4.9-2 sensible-utils_0.0.26 sysvinit-utils_3.14-4 tar_1.35+dfsg-3.1 tzdata_2025b-5 util-linux_2.41.2-2 xz-utils_5.8.1-1.1 zlib1g_1:1.3.dfsg+really1.3.1-1+b1 +------------------------------------------------------------------------------+ | Build Sat, 11 Oct 2025 17:19:25 +0000 | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: hmmer Binary: hmmer, hmmer-doc, hmmer-examples Architecture: any all Version: 3.4+dfsg-3 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: http://hmmer.org/ Standards-Version: 4.7.2 Vcs-Browser: https://salsa.debian.org/med-team/hmmer Vcs-Git: https://salsa.debian.org/med-team/hmmer.git Testsuite: autopkgtest Testsuite-Triggers: python3 Build-Depends: debhelper-compat (= 13), libdivsufsort-dev, python3 Package-List: hmmer deb science optional arch=any-amd64,any-i386,arm64,powerpc,ppc64,x32 hmmer-doc deb doc optional arch=all hmmer-examples deb doc optional arch=any Checksums-Sha1: 69590adb499ca8e4eea9d2ed10fb66ae42e82ea8 13297988 hmmer_3.4+dfsg.orig.tar.xz 1996bb01d664abff34eac52b5b57ef7e11d4a714 12996 hmmer_3.4+dfsg-3.debian.tar.xz Checksums-Sha256: 87ada77366ed6ab0159a0c1217f8a55cbe9a708c4a98cf644929eb3703ce3309 13297988 hmmer_3.4+dfsg.orig.tar.xz 3864769123ce5f52fca65a9fad242e1930dc813e28baca4d09075d143379deda 12996 hmmer_3.4+dfsg-3.debian.tar.xz Files: ac66418b48c613d96d43770f971a22d3 13297988 hmmer_3.4+dfsg.orig.tar.xz 1381e0ec563f438fa48b147b0c6b4335 12996 hmmer_3.4+dfsg-3.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQEzBAEBCgAdFiEE1Uw7+v+wQt44LaXXQc5/C58bizIFAmjagNoACgkQQc5/C58b izIqwgf/aS9ZDyRa/dCnDzVTVu9pBa/OLznAAYdanFAIiePSuVO4ACAU6JjWB14d i/1ZByuuPl86dhdeqzR4NHbMJxaJH60KPXVZhKa2I5mrYlwD6upcD3HEwkGr/SyP xBdiTlxGIxoKiO3Ct8Hbz0b9T25uyfU45OOA6kVFpjg1wxiUUzxBjh5RKJFr6ZUR hBv/ctEvkE9D456Tu3o/LcyKmM4rQIhmY+UiBx5Srs/FSNYmPIq5nJCN/lTbUlIh KfWLtCB+dWHD5VERgyuQJN3m99VWW4BPZPvp1KTjBvS4SenF/bEzj83jvamAJqZs kTy9bmptwA1V+g2W8REqTnDzbmw6iQ== =qf5Q -----END PGP SIGNATURE----- dpkg-source: warning: cannot verify inline signature for ./hmmer_3.4+dfsg-3.dsc: unsupported subcommand dpkg-source: info: extracting hmmer in /build/reproducible-path/hmmer-3.4+dfsg dpkg-source: info: unpacking hmmer_3.4+dfsg.orig.tar.xz dpkg-source: info: unpacking hmmer_3.4+dfsg-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying fix_manpage_extension.patch dpkg-source: info: applying use_debian_packaged_libdivsufsort.patch dpkg-source: info: applying verbose-easel dpkg-source: info: applying skip_threads_check dpkg-source: info: applying sub_make_parallel dpkg-source: info: applying spelling Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=6 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LC_COLLATE=C.UTF-8 LC_CTYPE=C.UTF-8 LOGNAME=sbuild PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SHELL=/bin/sh SOURCE_DATE_EPOCH=1759149900 USER=sbuild dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -us -uc -B dpkg-buildpackage: info: source package hmmer dpkg-buildpackage: info: source version 3.4+dfsg-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Santiago Vila dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 dpkg-source: info: using options from hmmer-3.4+dfsg/debian/source/options: --extend-diff-ignore=(^|/)config.(sub|guess)$ debian/rules clean dh clean debian/rules execute_after_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/hmmer-3.4+dfsg' rm -f testsuite/esltmp* rm -f easel/testsuite/esltmp* rm -f tutorial/MADE1.hmm.h3? rm -f config.log config.status configure find . -name Makefile -delete make[1]: Leaving directory '/build/reproducible-path/hmmer-3.4+dfsg' dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a debian/rules override_dh_autoreconf make[1]: Entering directory '/build/reproducible-path/hmmer-3.4+dfsg' AUTOHEADER=true dh_autoreconf make[1]: Leaving directory '/build/reproducible-path/hmmer-3.4+dfsg' debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/hmmer-3.4+dfsg' CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2" dh_auto_configure -- --enable-threads --enable-sse ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --enable-threads --enable-sse configure: Configuring HMMER3 for your system. checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking whether to compile using MPI... no checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking for gcc... (cached) gcc checking whether the compiler supports GNU C... (cached) yes checking whether gcc accepts -g... (cached) yes checking for gcc option to enable C11 features... (cached) none needed checking how to run the C preprocessor... gcc -E checking for a BSD-compatible install... /usr/bin/install -c checking for strip... strip checking for ranlib... ranlib checking for ar... /usr/bin/ar checking whether ln -s works... yes checking for a sed that does not truncate output... /usr/bin/sed checking for egrep -e... /usr/bin/grep -E checking whether gcc is Clang... no checking whether pthreads work with "-pthread" and "-lpthread"... yes checking for joinable pthread attribute... PTHREAD_CREATE_JOINABLE checking whether more special flags are required for pthreads... no checking for PTHREAD_PRIO_INHERIT... yes checking whether gcc can compile our SSE code... yes configure: Activating Intel/AMD SSE vector DP implementation checking whether _MM_SET_FLUSH_ZERO_MODE is supported... yes checking compiler support --start-group... yes checking for gzip... /usr/bin/gzip checking for python3... yes checking for library containing clock_gettime... none required checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for endian.h... yes checking for inttypes.h... (cached) yes checking for stdint.h... (cached) yes checking for unistd.h... (cached) yes checking for sys/types.h... (cached) yes checking for netinet/in.h... yes checking for sys/param.h... yes checking for sys/sysctl.h... no checking for uint8_t... yes checking for uint16_t... yes checking for uint32_t... yes checking for uint64_t... yes checking for off_t... yes checking whether byte ordering is bigendian... no checking for __attribute__((noreturn))... yes checking for __attribute__((format))... yes checking for mkstemp... yes checking for popen... yes checking for putenv... yes checking for strcasecmp... yes checking for strsep... yes checking for times... yes checking for getpid... yes checking for sysctl... no checking for sysconf... yes checking for getcwd... yes checking for chmod... yes checking for stat... yes checking for fstat... yes checking for erfc... no checking for library containing ntohs... none required checking for library containing ntohl... none required checking for library containing htons... none required checking for library containing htonl... none required checking for library containing socket... none required checking for library containing inet_pton... none required checking for declarations of fseeko and ftello... yes checking for -Wdate-time -D_FORTIFY_SOURCE=2 option for large files... none needed configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating testsuite/Makefile config.status: creating profmark/Makefile config.status: creating src/impl_sse/Makefile config.status: creating documentation/Makefile config.status: creating documentation/man/Makefile config.status: creating documentation/userguide/Makefile config.status: creating documentation/userguide/inclusions/Makefile config.status: creating easel/Makefile config.status: creating easel/miniapps/Makefile config.status: creating easel/testsuite/Makefile config.status: creating easel/documentation/Makefile config.status: creating documentation/userguide/titlepage.tex config.status: creating documentation/userguide/titlepage_daemon.tex config.status: creating documentation/userguide/copyright.tex config.status: creating documentation/man/alimask.man config.status: creating documentation/man/hmmalign.man config.status: creating documentation/man/hmmbuild.man config.status: creating documentation/man/hmmc2.man config.status: creating documentation/man/hmmconvert.man config.status: creating documentation/man/hmmemit.man config.status: creating documentation/man/hmmer.man config.status: creating documentation/man/hmmfetch.man config.status: creating documentation/man/hmmlogo.man config.status: creating documentation/man/hmmpgmd.man config.status: creating documentation/man/hmmpgmd_shard.man config.status: creating documentation/man/hmmpress.man config.status: creating documentation/man/hmmscan.man config.status: creating documentation/man/hmmsearch.man config.status: creating documentation/man/hmmsim.man config.status: creating documentation/man/hmmstat.man config.status: creating documentation/man/jackhmmer.man config.status: creating documentation/man/makehmmerdb.man config.status: creating documentation/man/nhmmer.man config.status: creating documentation/man/nhmmscan.man config.status: creating documentation/man/phmmer.man config.status: creating easel/miniapps/esl-afetch.man config.status: creating easel/miniapps/esl-alimanip.man config.status: creating easel/miniapps/esl-alimap.man config.status: creating easel/miniapps/esl-alimask.man config.status: creating easel/miniapps/esl-alimerge.man config.status: creating easel/miniapps/esl-alipid.man config.status: creating easel/miniapps/esl-alirev.man config.status: creating easel/miniapps/esl-alistat.man config.status: creating easel/miniapps/esl-compalign.man config.status: creating easel/miniapps/esl-compstruct.man config.status: creating easel/miniapps/esl-construct.man config.status: creating easel/miniapps/esl-histplot.man config.status: creating easel/miniapps/esl-mask.man config.status: creating easel/miniapps/esl-mixdchlet.man config.status: creating easel/miniapps/esl-reformat.man config.status: creating easel/miniapps/esl-selectn.man config.status: creating easel/miniapps/esl-seqrange.man config.status: creating easel/miniapps/esl-seqstat.man config.status: creating easel/miniapps/esl-sfetch.man config.status: creating easel/miniapps/esl-shuffle.man config.status: creating easel/miniapps/esl-ssdraw.man config.status: creating easel/miniapps/esl-translate.man config.status: creating easel/miniapps/esl-weight.man config.status: creating easel/decoy_config.h config.status: creating src/p7_config.h config.status: creating easel/esl_config.h config.status: linking src/impl_sse to src/impl HMMER configuration: compiler: gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread host: x86_64-pc-linux-gnu linker: -Wl,-z,relro -Wl,-z,now -flto libraries: -lpthread DP implementation: sse Now do 'make' to build HMMER, and optionally: 'make check' to run self tests, 'make install' to install programs and man pages, '(cd easel; make install)' to install Easel tools. make[1]: Leaving directory '/build/reproducible-path/hmmer-3.4+dfsg' dh_auto_build -a make -j6 make[1]: Entering directory '/build/reproducible-path/hmmer-3.4+dfsg' make -C easel all make[2]: Entering directory '/build/reproducible-path/hmmer-3.4+dfsg/easel' gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c easel.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_alloc.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_alphabet.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_arr2.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_arr3.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_bitfield.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_buffer.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_cluster.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_composition.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_cpu.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_dirichlet.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_distance.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_dmatrix.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_dsqdata.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_exponential.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_fileparser.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_gamma.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_gencode.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_getopts.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_gev.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_graph.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_gumbel.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_heap.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_histogram.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_hmm.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_huffman.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_hyperexp.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_iset.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_json.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_keyhash.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_lognormal.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_matrixops.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_mem.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_minimizer.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_mixdchlet.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_mixgev.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_mpi.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_msa.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_msacluster.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_msafile.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_msafile2.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_msafile_a2m.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_msafile_afa.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_msafile_clustal.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_msafile_phylip.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_msafile_psiblast.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_msafile_selex.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_msafile_stockholm.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_msashuffle.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_msaweight.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_normal.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_paml.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_quicksort.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_random.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_rand64.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_randomseq.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_ratematrix.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_recorder.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_red_black.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_regexp.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_rootfinder.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_scorematrix.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_sq.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_sqio.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_sqio_ascii.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_sqio_ncbi.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_ssi.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_stack.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_stats.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_stopwatch.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_stretchexp.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_subcmd.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_threads.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_tree.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_varint.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_vectorops.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_weibull.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_workqueue.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_wuss.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_sse.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_avx.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_avx512.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_neon.c gcc -I. -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -c esl_vmx.c /usr/bin/ar -r libeasel.a easel.o esl_alloc.o esl_alphabet.o esl_arr2.o esl_arr3.o esl_bitfield.o esl_buffer.o esl_cluster.o esl_composition.o esl_cpu.o esl_dirichlet.o esl_distance.o esl_dmatrix.o esl_dsqdata.o esl_exponential.o esl_fileparser.o esl_gamma.o esl_gencode.o esl_getopts.o esl_gev.o esl_graph.o esl_gumbel.o esl_heap.o esl_histogram.o esl_hmm.o esl_huffman.o esl_hyperexp.o esl_iset.o esl_json.o esl_keyhash.o esl_lognormal.o esl_matrixops.o esl_mem.o esl_minimizer.o esl_mixdchlet.o esl_mixgev.o esl_mpi.o esl_msa.o esl_msacluster.o esl_msafile.o esl_msafile2.o esl_msafile_a2m.o esl_msafile_afa.o esl_msafile_clustal.o esl_msafile_phylip.o esl_msafile_psiblast.o esl_msafile_selex.o esl_msafile_stockholm.o esl_msashuffle.o esl_msaweight.o esl_normal.o esl_paml.o esl_quicksort.o esl_random.o esl_rand64.o esl_randomseq.o esl_ratematrix.o esl_recorder.o esl_red_black.o esl_regexp.o esl_rootfinder.o esl_scorematrix.o esl_sq.o esl_sqio.o esl_sqio_ascii.o esl_sqio_ncbi.o esl_ssi.o esl_stack.o esl_stats.o esl_stopwatch.o esl_stretchexp.o esl_subcmd.o esl_threads.o esl_tree.o esl_varint.o esl_vectorops.o esl_weibull.o esl_workqueue.o esl_wuss.o esl_sse.o esl_avx.o esl_avx512.o esl_neon.o esl_vmx.o > /dev/null 2>&1 make -C miniapps all make[3]: Entering directory '/build/reproducible-path/hmmer-3.4+dfsg/easel/miniapps' gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wl,-z,relro -Wl,-z,now -flto -L.. -I. -I.. -I. -I./.. -o esl-afetch esl-afetch.c -leasel -lpthread -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wl,-z,relro -Wl,-z,now -flto -L.. -I. -I.. -I. -I./.. -o esl-alimanip esl-alimanip.c -leasel -lpthread -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wl,-z,relro -Wl,-z,now -flto -L.. -I. -I.. -I. -I./.. -o esl-alimap esl-alimap.c -leasel -lpthread -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wl,-z,relro -Wl,-z,now -flto -L.. -I. -I.. -I. -I./.. -o esl-alimask esl-alimask.c -leasel -lpthread -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wl,-z,relro -Wl,-z,now -flto -L.. -I. -I.. -I. -I./.. -o esl-alimerge esl-alimerge.c -leasel -lpthread -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wl,-z,relro -Wl,-z,now -flto -L.. -I. -I.. -I. -I./.. -o esl-alipid esl-alipid.c -leasel -lpthread -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wl,-z,relro -Wl,-z,now -flto -L.. -I. -I.. -I. -I./.. -o esl-alirev esl-alirev.c -leasel -lpthread -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wl,-z,relro -Wl,-z,now -flto -L.. -I. -I.. -I. -I./.. -o esl-alistat esl-alistat.c -leasel -lpthread -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wl,-z,relro -Wl,-z,now -flto -L.. -I. -I.. -I. -I./.. -o esl-compalign esl-compalign.c -leasel -lpthread -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wl,-z,relro -Wl,-z,now -flto -L.. -I. -I.. -I. -I./.. -o esl-compstruct esl-compstruct.c -leasel -lpthread -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wl,-z,relro -Wl,-z,now -flto -L.. -I. -I.. -I. -I./.. -o esl-construct esl-construct.c -leasel -lpthread -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wl,-z,relro -Wl,-z,now -flto -L.. -I. -I.. -I. -I./.. -o esl-histplot esl-histplot.c -leasel -lpthread -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wl,-z,relro -Wl,-z,now -flto -L.. -I. -I.. -I. -I./.. -o esl-mask esl-mask.c -leasel -lpthread -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wl,-z,relro -Wl,-z,now -flto -L.. -I. -I.. -I. -I./.. -o esl-mixdchlet esl-mixdchlet.c -leasel -lpthread -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wl,-z,relro -Wl,-z,now -flto -L.. -I. -I.. -I. -I./.. -o esl-reformat esl-reformat.c -leasel -lpthread -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wl,-z,relro -Wl,-z,now -flto -L.. -I. -I.. -I. -I./.. -o esl-selectn esl-selectn.c -leasel -lpthread -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wl,-z,relro -Wl,-z,now -flto -L.. -I. -I.. -I. -I./.. -o esl-seqrange esl-seqrange.c -leasel -lpthread -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wl,-z,relro -Wl,-z,now -flto -L.. -I. -I.. -I. -I./.. -o esl-seqstat esl-seqstat.c -leasel -lpthread -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wl,-z,relro -Wl,-z,now -flto -L.. -I. -I.. -I. -I./.. -o esl-sfetch esl-sfetch.c -leasel -lpthread -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wl,-z,relro -Wl,-z,now -flto -L.. -I. -I.. -I. -I./.. -o esl-shuffle esl-shuffle.c -leasel -lpthread -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wl,-z,relro -Wl,-z,now -flto -L.. -I. -I.. -I. -I./.. -o esl-ssdraw esl-ssdraw.c -leasel -lpthread -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wl,-z,relro -Wl,-z,now -flto -L.. -I. -I.. -I. -I./.. -o esl-translate esl-translate.c -leasel -lpthread -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wl,-z,relro -Wl,-z,now -flto -L.. -I. -I.. -I. -I./.. -o esl-weight esl-weight.c -leasel -lpthread -lm gcc -I. -I.. -I. -I./.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -c cmd_alistat.c gcc -I. -I.. -I. -I./.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -c cmd_downsample.c gcc -I. -I.. -I. -I./.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -c cmd_filter.c gcc -I. -I.. -I. -I./.. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -c cmd_index.c gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wl,-z,relro -Wl,-z,now -flto -L.. -I. -I.. -I. -I./.. -o easel easel.c cmd_alistat.o cmd_downsample.o cmd_filter.o cmd_index.o -leasel -lpthread -lm make[3]: Leaving directory '/build/reproducible-path/hmmer-3.4+dfsg/easel/miniapps' make[2]: Leaving directory '/build/reproducible-path/hmmer-3.4+dfsg/easel' make -C src all make[2]: Entering directory '/build/reproducible-path/hmmer-3.4+dfsg/src' gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o alimask.o -c alimask.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o build.o -c build.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o cachedb.o -c cachedb.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o cachedb_shard.o -c cachedb_shard.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o emit.o -c emit.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o errors.o -c errors.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o evalues.o -c evalues.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o eweight.o -c eweight.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o generic_decoding.o -c generic_decoding.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o generic_fwdback.o -c generic_fwdback.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o generic_fwdback_chk.o -c generic_fwdback_chk.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o generic_fwdback_banded.o -c generic_fwdback_banded.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o generic_null2.o -c generic_null2.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o generic_msv.o -c generic_msv.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o generic_optacc.o -c generic_optacc.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o generic_stotrace.o -c generic_stotrace.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o generic_viterbi.o -c generic_viterbi.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o generic_vtrace.o -c generic_vtrace.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o h2_io.o -c h2_io.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o heatmap.o -c heatmap.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o hmmlogo.o -c hmmlogo.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o hmmdmstr.o -c hmmdmstr.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o hmmdmstr_shard.o -c hmmdmstr_shard.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o hmmd_search_status.o -c hmmd_search_status.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o hmmdwrkr.o -c hmmdwrkr.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o hmmdwrkr_shard.o -c hmmdwrkr_shard.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o hmmdutils.o -c hmmdutils.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o hmmer.o -c hmmer.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o logsum.o -c logsum.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o modelconfig.o -c modelconfig.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o modelstats.o -c modelstats.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o mpisupport.o -c mpisupport.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o seqmodel.o -c seqmodel.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o tracealign.o -c tracealign.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o p7_alidisplay.o -c p7_alidisplay.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o p7_bg.o -c p7_bg.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o p7_builder.o -c p7_builder.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o p7_domain.o -c p7_domain.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o p7_domaindef.o -c p7_domaindef.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o p7_gbands.o -c p7_gbands.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o p7_gmx.o -c p7_gmx.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o p7_gmxb.o -c p7_gmxb.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o p7_gmxchk.o -c p7_gmxchk.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o p7_hit.o -c p7_hit.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o p7_hmm.o -c p7_hmm.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o p7_hmmcache.o -c p7_hmmcache.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o p7_hmmd_search_stats.o -c p7_hmmd_search_stats.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o p7_hmmfile.o -c p7_hmmfile.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o p7_hmmwindow.o -c p7_hmmwindow.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o p7_pipeline.o -c p7_pipeline.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o p7_prior.o -c p7_prior.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o p7_profile.o -c p7_profile.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o p7_spensemble.o -c p7_spensemble.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o p7_tophits.o -c p7_tophits.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o p7_trace.o -c p7_trace.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o p7_scoredata.o -c p7_scoredata.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o hmmpgmd2msa.o -c hmmpgmd2msa.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o fm_alphabet.o -c fm_alphabet.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o fm_general.o -c fm_general.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o fm_sse.o -c fm_sse.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o fm_ssv.o -c fm_ssv.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o hmmalign.o -c hmmalign.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o hmmbuild.o -c hmmbuild.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o hmmconvert.o -c hmmconvert.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o hmmemit.o -c hmmemit.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o hmmfetch.o -c hmmfetch.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o hmmpgmd.o -c hmmpgmd.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o hmmpgmd_shard.o -c hmmpgmd_shard.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o hmmpress.o -c hmmpress.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o hmmscan.o -c hmmscan.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o hmmsearch.o -c hmmsearch.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o hmmsim.o -c hmmsim.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o hmmstat.o -c hmmstat.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o jackhmmer.o -c jackhmmer.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o phmmer.o -c phmmer.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o nhmmer.o -c nhmmer.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o nhmmscan.o -c nhmmscan.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o makehmmerdb.o -c makehmmerdb.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o hmmc2.o -c hmmc2.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o hmmerfm-exactmatch.o -c hmmerfm-exactmatch.c /usr/bin/ar -r libhmmer.a build.o cachedb.o cachedb_shard.o emit.o errors.o evalues.o eweight.o generic_decoding.o generic_fwdback.o generic_fwdback_chk.o generic_fwdback_banded.o generic_null2.o generic_msv.o generic_optacc.o generic_stotrace.o generic_viterbi.o generic_vtrace.o h2_io.o heatmap.o hmmlogo.o hmmdmstr.o hmmdmstr_shard.o hmmd_search_status.o hmmdwrkr.o hmmdwrkr_shard.o hmmdutils.o hmmer.o logsum.o modelconfig.o modelstats.o mpisupport.o seqmodel.o tracealign.o p7_alidisplay.o p7_bg.o p7_builder.o p7_domain.o p7_domaindef.o p7_gbands.o p7_gmx.o p7_gmxb.o p7_gmxchk.o p7_hit.o p7_hmm.o p7_hmmcache.o p7_hmmd_search_stats.o p7_hmmfile.o p7_hmmwindow.o p7_pipeline.o p7_prior.o p7_profile.o p7_spensemble.o p7_tophits.o p7_trace.o p7_scoredata.o hmmpgmd2msa.o fm_alphabet.o fm_general.o fm_sse.o fm_ssv.o > /dev/null 2>&1 make -C impl_sse libhmmer-impl.stamp make[3]: Entering directory '/build/reproducible-path/hmmer-3.4+dfsg/src/impl_sse' gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_CONFIG_H -I../../easel -I../../easel -I. -I.. -I. -I../../src -I./.. -o decoding.o -c decoding.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_CONFIG_H -I../../easel -I../../easel -I. -I.. -I. -I../../src -I./.. -o fwdback.o -c fwdback.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_CONFIG_H -I../../easel -I../../easel -I. -I.. -I. -I../../src -I./.. -o io.o -c io.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_CONFIG_H -I../../easel -I../../easel -I. -I.. -I. -I../../src -I./.. -o ssvfilter.o -c ssvfilter.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_CONFIG_H -I../../easel -I../../easel -I. -I.. -I. -I../../src -I./.. -o msvfilter.o -c msvfilter.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_CONFIG_H -I../../easel -I../../easel -I. -I.. -I. -I../../src -I./.. -o null2.o -c null2.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_CONFIG_H -I../../easel -I../../easel -I. -I.. -I. -I../../src -I./.. -o optacc.o -c optacc.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_CONFIG_H -I../../easel -I../../easel -I. -I.. -I. -I../../src -I./.. -o stotrace.o -c stotrace.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_CONFIG_H -I../../easel -I../../easel -I. -I.. -I. -I../../src -I./.. -o vitfilter.o -c vitfilter.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_CONFIG_H -I../../easel -I../../easel -I. -I.. -I. -I../../src -I./.. -o p7_omx.o -c p7_omx.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_CONFIG_H -I../../easel -I../../easel -I. -I.. -I. -I../../src -I./.. -o p7_oprofile.o -c p7_oprofile.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_CONFIG_H -I../../easel -I../../easel -I. -I.. -I. -I../../src -I./.. -o mpi.o -c mpi.c /usr/bin/ar -r ../libhmmer.a decoding.o fwdback.o io.o ssvfilter.o msvfilter.o null2.o optacc.o stotrace.o vitfilter.o p7_omx.o p7_oprofile.o mpi.o > /dev/null 2>&1 make[3]: Leaving directory '/build/reproducible-path/hmmer-3.4+dfsg/src/impl_sse' gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -L../easel -L./impl_sse -L. -o alimask alimask.o -lhmmer -leasel -ldivsufsort -lpthread -lm gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -L../easel -L./impl_sse -L. -o hmmalign hmmalign.o -lhmmer -leasel -ldivsufsort -lpthread -lm gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -L../easel -L./impl_sse -L. -o hmmbuild hmmbuild.o -lhmmer -leasel -ldivsufsort -lpthread -lm gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -L../easel -L./impl_sse -L. -o hmmconvert hmmconvert.o -lhmmer -leasel -ldivsufsort -lpthread -lm gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -L../easel -L./impl_sse -L. -o hmmemit hmmemit.o -lhmmer -leasel -ldivsufsort -lpthread -lm gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -L../easel -L./impl_sse -L. -o hmmfetch hmmfetch.o -lhmmer -leasel -ldivsufsort -lpthread -lm ../easel/esl_scorematrix.c: In function ‘esl_scorematrix_Create’: ../easel/esl_scorematrix.c:71:3: warning: argument 1 range [18446744071562067969, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 71 | ESL_ALLOC(S->outorder, sizeof(char) * (abc->Kp+1)); | ^ /usr/include/stdlib.h:672:14: note: in a call to allocation function ‘malloc’ declared here 672 | extern void *malloc (size_t __size) __THROW __attribute_malloc__ | ^ gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -L../easel -L./impl_sse -L. -o hmmlogo hmmlogo.o -lhmmer -leasel -ldivsufsort -lpthread -lm gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -L../easel -L./impl_sse -L. -o hmmpgmd hmmpgmd.o -lhmmer -leasel -ldivsufsort -lpthread -lm gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -L../easel -L./impl_sse -L. -o hmmpgmd_shard hmmpgmd_shard.o -lhmmer -leasel -ldivsufsort -lpthread -lm gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -L../easel -L./impl_sse -L. -o hmmpress hmmpress.o -lhmmer -leasel -ldivsufsort -lpthread -lm ../easel/esl_scorematrix.c: In function ‘esl_scorematrix_Create’: ../easel/esl_scorematrix.c:71:3: warning: argument 1 range [18446744071562067969, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 71 | ESL_ALLOC(S->outorder, sizeof(char) * (abc->Kp+1)); | ^ /usr/include/stdlib.h:672:14: note: in a call to allocation function ‘malloc’ declared here 672 | extern void *malloc (size_t __size) __THROW __attribute_malloc__ | ^ ../easel/esl_scorematrix.c: In function ‘esl_scorematrix_Create’: ../easel/esl_scorematrix.c:71:3: warning: argument 1 range [18446744071562067969, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 71 | ESL_ALLOC(S->outorder, sizeof(char) * (abc->Kp+1)); | ^ /usr/include/stdlib.h:672:14: note: in a call to allocation function ‘malloc’ declared here 672 | extern void *malloc (size_t __size) __THROW __attribute_malloc__ | ^ gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -L../easel -L./impl_sse -L. -o hmmscan hmmscan.o -lhmmer -leasel -ldivsufsort -lpthread -lm gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -L../easel -L./impl_sse -L. -o hmmsearch hmmsearch.o -lhmmer -leasel -ldivsufsort -lpthread -lm gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -L../easel -L./impl_sse -L. -o hmmsim hmmsim.o -lhmmer -leasel -ldivsufsort -lpthread -lm gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -L../easel -L./impl_sse -L. -o hmmstat hmmstat.o -lhmmer -leasel -ldivsufsort -lpthread -lm gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -L../easel -L./impl_sse -L. -o jackhmmer jackhmmer.o -lhmmer -leasel -ldivsufsort -lpthread -lm ../easel/esl_scorematrix.c: In function ‘esl_scorematrix_Create’: ../easel/esl_scorematrix.c:71:3: warning: argument 1 range [18446744071562067969, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 71 | ESL_ALLOC(S->outorder, sizeof(char) * (abc->Kp+1)); | ^ /usr/include/stdlib.h:672:14: note: in a call to allocation function ‘malloc’ declared here 672 | extern void *malloc (size_t __size) __THROW __attribute_malloc__ | ^ gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -L../easel -L./impl_sse -L. -o phmmer phmmer.o -lhmmer -leasel -ldivsufsort -lpthread -lm gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -L../easel -L./impl_sse -L. -o nhmmer nhmmer.o -lhmmer -leasel -ldivsufsort -lpthread -lm ../easel/esl_scorematrix.c: In function ‘esl_scorematrix_Create’: ../easel/esl_scorematrix.c:71:3: warning: argument 1 range [18446744071562067969, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 71 | ESL_ALLOC(S->outorder, sizeof(char) * (abc->Kp+1)); | ^ /usr/include/stdlib.h:672:14: note: in a call to allocation function ‘malloc’ declared here 672 | extern void *malloc (size_t __size) __THROW __attribute_malloc__ | ^ gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -L../easel -L./impl_sse -L. -o nhmmscan nhmmscan.o -lhmmer -leasel -ldivsufsort -lpthread -lm ../easel/esl_scorematrix.c: In function ‘esl_scorematrix_Create’: ../easel/esl_scorematrix.c:71:3: warning: argument 1 range [18446744071562067969, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 71 | ESL_ALLOC(S->outorder, sizeof(char) * (abc->Kp+1)); | ^ /usr/include/stdlib.h:672:14: note: in a call to allocation function ‘malloc’ declared here 672 | extern void *malloc (size_t __size) __THROW __attribute_malloc__ | ^ gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -L../easel -L./impl_sse -L. -o makehmmerdb makehmmerdb.o -lhmmer -leasel -ldivsufsort -lpthread -lm gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -L../easel -L./impl_sse -L. -o hmmc2 hmmc2.o -lhmmer -leasel -ldivsufsort -lpthread -lm gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -L../easel -L./impl_sse -L. -o hmmerfm-exactmatch hmmerfm-exactmatch.o -lhmmer -leasel -ldivsufsort -lpthread -lm make[2]: Leaving directory '/build/reproducible-path/hmmer-3.4+dfsg/src' make -C profmark all make[2]: Entering directory '/build/reproducible-path/hmmer-3.4+dfsg/profmark' gcc -I../easel -I../easel -I../src -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -o create-profmark.o -c create-profmark.c gcc -I../easel -I../easel -I../src -I../src -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -o rocplot.o -c rocplot.c gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wl,-z,relro -Wl,-z,now -flto -L../easel -L../src -o rocplot rocplot.o -lhmmer -leasel -lpthread -lm gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wl,-z,relro -Wl,-z,now -flto -L../easel -L../src -o create-profmark create-profmark.o -lhmmer -leasel -lpthread -lm make[2]: Leaving directory '/build/reproducible-path/hmmer-3.4+dfsg/profmark' make[1]: Leaving directory '/build/reproducible-path/hmmer-3.4+dfsg' debian/rules execute_after_dh_auto_build make[1]: Entering directory '/build/reproducible-path/hmmer-3.4+dfsg' /usr/bin/make tests -j 6 make[2]: Entering directory '/build/reproducible-path/hmmer-3.4+dfsg' /usr/bin/make -C easel tests make[3]: Entering directory '/build/reproducible-path/hmmer-3.4+dfsg/easel' gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_alphabet_utest -I. -I. -L. -DeslALPHABET_TESTDRIVE ./esl_alphabet.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o easel_utest -I. -I. -L. -DeslEASEL_TESTDRIVE ./easel.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_alloc_utest -I. -I. -L. -DeslALLOC_TESTDRIVE ./esl_alloc.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_buffer_utest -I. -I. -L. -DeslBUFFER_TESTDRIVE ./esl_buffer.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_cluster_utest -I. -I. -L. -DeslCLUSTER_TESTDRIVE ./esl_cluster.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_bitfield_utest -I. -I. -L. -DeslBITFIELD_TESTDRIVE ./esl_bitfield.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_cpu_utest -I. -I. -L. -DeslCPU_TESTDRIVE ./esl_cpu.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_dirichlet_utest -I. -I. -L. -DeslDIRICHLET_TESTDRIVE ./esl_dirichlet.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_distance_utest -I. -I. -L. -DeslDISTANCE_TESTDRIVE ./esl_distance.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_dmatrix_utest -I. -I. -L. -DeslDMATRIX_TESTDRIVE ./esl_dmatrix.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_dsqdata_utest -I. -I. -L. -DeslDSQDATA_TESTDRIVE ./esl_dsqdata.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_exponential_utest -I. -I. -L. -DeslEXPONENTIAL_TESTDRIVE ./esl_exponential.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_fileparser_utest -I. -I. -L. -DeslFILEPARSER_TESTDRIVE ./esl_fileparser.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_gamma_utest -I. -I. -L. -DeslGAMMA_TESTDRIVE ./esl_gamma.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_gencode_utest -I. -I. -L. -DeslGENCODE_TESTDRIVE ./esl_gencode.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_getopts_utest -I. -I. -L. -DeslGETOPTS_TESTDRIVE ./esl_getopts.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_graph_utest -I. -I. -L. -DeslGRAPH_TESTDRIVE ./esl_graph.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_gumbel_utest -I. -I. -L. -DeslGUMBEL_TESTDRIVE ./esl_gumbel.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_heap_utest -I. -I. -L. -DeslHEAP_TESTDRIVE ./esl_heap.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_histogram_utest -I. -I. -L. -DeslHISTOGRAM_TESTDRIVE ./esl_histogram.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_hmm_utest -I. -I. -L. -DeslHMM_TESTDRIVE ./esl_hmm.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_huffman_utest -I. -I. -L. -DeslHUFFMAN_TESTDRIVE ./esl_huffman.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_hyperexp_utest -I. -I. -L. -DeslHYPEREXP_TESTDRIVE ./esl_hyperexp.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_iset_utest -I. -I. -L. -DeslISET_TESTDRIVE ./esl_iset.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_json_utest -I. -I. -L. -DeslJSON_TESTDRIVE ./esl_json.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_keyhash_utest -I. -I. -L. -DeslKEYHASH_TESTDRIVE ./esl_keyhash.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_lognormal_utest -I. -I. -L. -DeslLOGNORMAL_TESTDRIVE ./esl_lognormal.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_matrixops_utest -I. -I. -L. -DeslMATRIXOPS_TESTDRIVE ./esl_matrixops.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_mem_utest -I. -I. -L. -DeslMEM_TESTDRIVE ./esl_mem.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_minimizer_utest -I. -I. -L. -DeslMINIMIZER_TESTDRIVE ./esl_minimizer.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_mixdchlet_utest -I. -I. -L. -DeslMIXDCHLET_TESTDRIVE ./esl_mixdchlet.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_msa_utest -I. -I. -L. -DeslMSA_TESTDRIVE ./esl_msa.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_msacluster_utest -I. -I. -L. -DeslMSACLUSTER_TESTDRIVE ./esl_msacluster.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_msafile_utest -I. -I. -L. -DeslMSAFILE_TESTDRIVE ./esl_msafile.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_msafile2_utest -I. -I. -L. -DeslMSAFILE2_TESTDRIVE ./esl_msafile2.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_msafile_a2m_utest -I. -I. -L. -DeslMSAFILE_A2M_TESTDRIVE ./esl_msafile_a2m.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_msafile_afa_utest -I. -I. -L. -DeslMSAFILE_AFA_TESTDRIVE ./esl_msafile_afa.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_msafile_clustal_utest -I. -I. -L. -DeslMSAFILE_CLUSTAL_TESTDRIVE ./esl_msafile_clustal.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_msafile_phylip_utest -I. -I. -L. -DeslMSAFILE_PHYLIP_TESTDRIVE ./esl_msafile_phylip.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_msafile_psiblast_utest -I. -I. -L. -DeslMSAFILE_PSIBLAST_TESTDRIVE ./esl_msafile_psiblast.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_msafile_selex_utest -I. -I. -L. -DeslMSAFILE_SELEX_TESTDRIVE ./esl_msafile_selex.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_msafile_stockholm_utest -I. -I. -L. -DeslMSAFILE_STOCKHOLM_TESTDRIVE ./esl_msafile_stockholm.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_msaweight_utest -I. -I. -L. -DeslMSAWEIGHT_TESTDRIVE ./esl_msaweight.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_normal_utest -I. -I. -L. -DeslNORMAL_TESTDRIVE ./esl_normal.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_quicksort_utest -I. -I. -L. -DeslQUICKSORT_TESTDRIVE ./esl_quicksort.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_random_utest -I. -I. -L. -DeslRANDOM_TESTDRIVE ./esl_random.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_rand64_utest -I. -I. -L. -DeslRAND64_TESTDRIVE ./esl_rand64.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_randomseq_utest -I. -I. -L. -DeslRANDOMSEQ_TESTDRIVE ./esl_randomseq.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_ratematrix_utest -I. -I. -L. -DeslRATEMATRIX_TESTDRIVE ./esl_ratematrix.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_red_black_utest -I. -I. -L. -DeslRED_BLACK_TESTDRIVE ./esl_red_black.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_recorder_utest -I. -I. -L. -DeslRECORDER_TESTDRIVE ./esl_recorder.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_regexp_utest -I. -I. -L. -DeslREGEXP_TESTDRIVE ./esl_regexp.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_rootfinder_utest -I. -I. -L. -DeslROOTFINDER_TESTDRIVE ./esl_rootfinder.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_scorematrix_utest -I. -I. -L. -DeslSCOREMATRIX_TESTDRIVE ./esl_scorematrix.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_sq_utest -I. -I. -L. -DeslSQ_TESTDRIVE ./esl_sq.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_sqio_utest -I. -I. -L. -DeslSQIO_TESTDRIVE ./esl_sqio.c -leasel -lm -lpthread ./esl_scorematrix.c: In function ‘esl_scorematrix_Create’: ./esl_scorematrix.c:71:3: warning: argument 1 range [18446744071562067969, 18446744073709551615] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 71 | ESL_ALLOC(S->outorder, sizeof(char) * (abc->Kp+1)); | ^ /usr/include/stdlib.h:672:14: note: in a call to allocation function ‘malloc’ declared here 672 | extern void *malloc (size_t __size) __THROW __attribute_malloc__ | ^ gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_ssi_utest -I. -I. -L. -DeslSSI_TESTDRIVE ./esl_ssi.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_stack_utest -I. -I. -L. -DeslSTACK_TESTDRIVE ./esl_stack.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_stats_utest -I. -I. -L. -DeslSTATS_TESTDRIVE ./esl_stats.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_stretchexp_utest -I. -I. -L. -DeslSTRETCHEXP_TESTDRIVE ./esl_stretchexp.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_tree_utest -I. -I. -L. -DeslTREE_TESTDRIVE ./esl_tree.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_varint_utest -I. -I. -L. -DeslVARINT_TESTDRIVE ./esl_varint.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_vectorops_utest -I. -I. -L. -DeslVECTOROPS_TESTDRIVE ./esl_vectorops.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_weibull_utest -I. -I. -L. -DeslWEIBULL_TESTDRIVE ./esl_weibull.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_wuss_utest -I. -I. -L. -DeslWUSS_TESTDRIVE ./esl_wuss.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_sse_utest -I. -I. -L. -DeslSSE_TESTDRIVE ./esl_sse.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_avx_utest -I. -I. -L. -DeslAVX_TESTDRIVE ./esl_avx.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_avx512_utest -I. -I. -L. -DeslAVX512_TESTDRIVE ./esl_avx512.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_neon_utest -I. -I. -L. -DeslNEON_TESTDRIVE ./esl_neon.c -leasel -lm -lpthread gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wl,-z,relro -Wl,-z,now -flto -o esl_vmx_utest -I. -I. -L. -DeslVMX_TESTDRIVE ./esl_vmx.c -leasel -lm -lpthread /usr/bin/make -C miniapps tests make[4]: Entering directory '/build/reproducible-path/hmmer-3.4+dfsg/easel/miniapps' make[4]: Nothing to be done for 'tests'. make[4]: Leaving directory '/build/reproducible-path/hmmer-3.4+dfsg/easel/miniapps' make[3]: Leaving directory '/build/reproducible-path/hmmer-3.4+dfsg/easel' /usr/bin/make -C src tests make[3]: Entering directory '/build/reproducible-path/hmmer-3.4+dfsg/src' /usr/bin/make -C impl_sse libhmmer-impl.stamp gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -I../easel -I../easel -I. -I. -o itest_brute.o -c itest_brute.c make[4]: Entering directory '/build/reproducible-path/hmmer-3.4+dfsg/src/impl_sse' make[4]: 'libhmmer-impl.stamp' is up to date. make[4]: Leaving directory '/build/reproducible-path/hmmer-3.4+dfsg/src/impl_sse' gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7GENERIC_FWDBACK_TESTDRIVE -o generic_fwdback_utest ./generic_fwdback.c -lhmmer -leasel -ldivsufsort -lpthread -lm gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7GENERIC_FWDBACK_CHK_TESTDRIVE -o generic_fwdback_chk_utest ./generic_fwdback_chk.c -lhmmer -leasel -ldivsufsort -lpthread -lm gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7BUILD_TESTDRIVE -o build_utest ./build.c -lhmmer -leasel -ldivsufsort -lpthread -lm gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7GENERIC_MSV_TESTDRIVE -o generic_msv_utest ./generic_msv.c -lhmmer -leasel -ldivsufsort -lpthread -lm gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7GENERIC_STOTRACE_TESTDRIVE -o generic_stotrace_utest ./generic_stotrace.c -lhmmer -leasel -ldivsufsort -lpthread -lm gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7GENERIC_VITERBI_TESTDRIVE -o generic_viterbi_utest ./generic_viterbi.c -lhmmer -leasel -ldivsufsort -lpthread -lm gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7HMMER_TESTDRIVE -o hmmer_utest ./hmmer.c -lhmmer -leasel -ldivsufsort -lpthread -lm gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7LOGSUM_TESTDRIVE -o logsum_utest ./logsum.c -lhmmer -leasel -ldivsufsort -lpthread -lm gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7MODELCONFIG_TESTDRIVE -o modelconfig_utest ./modelconfig.c -lhmmer -leasel -ldivsufsort -lpthread -lm gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7SEQMODEL_TESTDRIVE -o seqmodel_utest ./seqmodel.c -lhmmer -leasel -ldivsufsort -lpthread -lm gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7ALIDISPLAY_TESTDRIVE -o p7_alidisplay_utest ./p7_alidisplay.c -lhmmer -leasel -ldivsufsort -lpthread -lm gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7BG_TESTDRIVE -o p7_bg_utest ./p7_bg.c -lhmmer -leasel -ldivsufsort -lpthread -lm gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7DOMAIN_TESTDRIVE -o p7_domain_utest ./p7_domain.c -lhmmer -leasel -ldivsufsort -lpthread -lm gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7GMX_TESTDRIVE -o p7_gmx_utest ./p7_gmx.c -lhmmer -leasel -ldivsufsort -lpthread -lm gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7GMXCHK_TESTDRIVE -o p7_gmxchk_utest ./p7_gmxchk.c -lhmmer -leasel -ldivsufsort -lpthread -lm gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7HIT_TESTDRIVE -o p7_hit_utest ./p7_hit.c -lhmmer -leasel -ldivsufsort -lpthread -lm gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7HMMD_SEARCH_STATS_TESTDRIVE -o p7_hmmd_search_stats_utest ./p7_hmmd_search_stats.c -lhmmer -leasel -ldivsufsort -lpthread -lm gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7HMM_TESTDRIVE -o p7_hmm_utest ./p7_hmm.c -lhmmer -leasel -ldivsufsort -lpthread -lm gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7HMMFILE_TESTDRIVE -o p7_hmmfile_utest ./p7_hmmfile.c -lhmmer -leasel -ldivsufsort -lpthread -lm gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7PROFILE_TESTDRIVE -o p7_profile_utest ./p7_profile.c -lhmmer -leasel -ldivsufsort -lpthread -lm gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7TOPHITS_TESTDRIVE -o p7_tophits_utest ./p7_tophits.c -lhmmer -leasel -ldivsufsort -lpthread -lm gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7TRACE_TESTDRIVE -o p7_trace_utest ./p7_trace.c -lhmmer -leasel -ldivsufsort -lpthread -lm gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7SCOREDATA_TESTDRIVE -o p7_scoredata_utest ./p7_scoredata.c -lhmmer -leasel -ldivsufsort -lpthread -lm gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7HMMPGMD2MSA_TESTDRIVE -o hmmpgmd2msa_utest ./hmmpgmd2msa.c -lhmmer -leasel -ldivsufsort -lpthread -lm gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../easel -L./impl_sse -L. -I../easel -I../easel -I. -I. -Dp7HMMD_SEARCH_STATUS_TESTDRIVE -o hmmd_search_status_utest ./hmmd_search_status.c -lhmmer -leasel -ldivsufsort -lpthread -lm gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -DHAVE_CONFIG_H -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -L../easel -L./impl_sse -L. -o itest_brute itest_brute.o -lhmmer -leasel -ldivsufsort -lpthread -lm /usr/bin/make -C impl_sse tests make[4]: Entering directory '/build/reproducible-path/hmmer-3.4+dfsg/src/impl_sse' gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../../easel -L.. -I../../easel -I../../easel -I. -I.. -I. -I../../src -I./.. -Dp7FWDBACK_TESTDRIVE -o fwdback_utest ./fwdback.c -lhmmer -leasel -lm gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../../easel -L.. -I../../easel -I../../easel -I. -I.. -I. -I../../src -I./.. -Dp7MSVFILTER_TESTDRIVE -o msvfilter_utest ./msvfilter.c -lhmmer -leasel -lm gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../../easel -L.. -I../../easel -I../../easel -I. -I.. -I. -I../../src -I./.. -Dp7DECODING_TESTDRIVE -o decoding_utest ./decoding.c -lhmmer -leasel -lm gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../../easel -L.. -I../../easel -I../../easel -I. -I.. -I. -I../../src -I./.. -Dp7OPTACC_TESTDRIVE -o optacc_utest ./optacc.c -lhmmer -leasel -lm gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../../easel -L.. -I../../easel -I../../easel -I. -I.. -I. -I../../src -I./.. -Dp7NULL2_TESTDRIVE -o null2_utest ./null2.c -lhmmer -leasel -lm gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../../easel -L.. -I../../easel -I../../easel -I. -I.. -I. -I../../src -I./.. -Dp7IO_TESTDRIVE -o io_utest ./io.c -lhmmer -leasel -lm gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../../easel -L.. -I../../easel -I../../easel -I. -I.. -I. -I../../src -I./.. -Dp7STOTRACE_TESTDRIVE -o stotrace_utest ./stotrace.c -lhmmer -leasel -lm gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/hmmer-3.4+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -flto -pthread -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -flto -DHAVE_CONFIG_H -L../../easel -L.. -I../../easel -I../../easel -I. -I.. -I. -I../../src -I./.. -Dp7VITFILTER_TESTDRIVE -o vitfilter_utest ./vitfilter.c -lhmmer -leasel -lm make[4]: Leaving directory '/build/reproducible-path/hmmer-3.4+dfsg/src/impl_sse' make[3]: Leaving directory '/build/reproducible-path/hmmer-3.4+dfsg/src' make[2]: Leaving directory '/build/reproducible-path/hmmer-3.4+dfsg' make[1]: Leaving directory '/build/reproducible-path/hmmer-3.4+dfsg' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/hmmer-3.4+dfsg' /usr/bin/make check -j 6 | tee debian/test_log make[2]: Entering directory '/build/reproducible-path/hmmer-3.4+dfsg' /usr/bin/make -C easel tests make[3]: Entering directory '/build/reproducible-path/hmmer-3.4+dfsg/easel' /usr/bin/make -C miniapps tests make[4]: Entering directory '/build/reproducible-path/hmmer-3.4+dfsg/easel/miniapps' make[4]: Nothing to be done for 'tests'. make[4]: Leaving directory '/build/reproducible-path/hmmer-3.4+dfsg/easel/miniapps' make[3]: Leaving directory '/build/reproducible-path/hmmer-3.4+dfsg/easel' /usr/bin/make -C src tests make[3]: Entering directory '/build/reproducible-path/hmmer-3.4+dfsg/src' /usr/bin/make -C impl_sse libhmmer-impl.stamp make[4]: Entering directory '/build/reproducible-path/hmmer-3.4+dfsg/src/impl_sse' make[4]: 'libhmmer-impl.stamp' is up to date. make[4]: Leaving directory '/build/reproducible-path/hmmer-3.4+dfsg/src/impl_sse' /usr/bin/make -C impl_sse tests make[4]: Entering directory '/build/reproducible-path/hmmer-3.4+dfsg/src/impl_sse' make[4]: Nothing to be done for 'tests'. make[4]: Leaving directory '/build/reproducible-path/hmmer-3.4+dfsg/src/impl_sse' make[3]: Leaving directory '/build/reproducible-path/hmmer-3.4+dfsg/src' /usr/bin/make -C easel check make[3]: Entering directory '/build/reproducible-path/hmmer-3.4+dfsg/easel' /usr/bin/make -C miniapps check make[4]: Entering directory '/build/reproducible-path/hmmer-3.4+dfsg/easel/miniapps' make[4]: Nothing to be done for 'check'. make[4]: Leaving directory '/build/reproducible-path/hmmer-3.4+dfsg/easel/miniapps' /usr/bin/make -C testsuite check make[4]: Entering directory '/build/reproducible-path/hmmer-3.4+dfsg/easel/testsuite' Running Easel test suite... exercise 1 [ easel-utest] ... ok. exercise 2 [ alloc-utest] ... ok. exercise 3 [ alphabet-utest] ... ok. exercise 4 [ avx-utest] ... ok. exercise 5 [ avx512-utest] ... ok. exercise 6 [ bitfield-utest] ... ok. exercise 7 [ buffer-utest] ... ok. exercise 8 [ cluster-utest] ... ok. exercise 9 [ cpu-utest] ... ok. exercise 10 [ dirichlet-utest] ... ok. exercise 11 [ distance-utest] ... ok. exercise 12 [ dmatrix-utest] ... ok. exercise 13 [ dsqdata-utest] ... ok. exercise 14 [ exponential-utest] ... ok. exercise 15 [ fileparser-utest] ... ok. exercise 16 [ gamma-utest] ... ok. exercise 17 [ gencode-utest] ... ok. exercise 18 [ getopts-utest] ... ok. exercise 19 [ graph-utest] ... ok. exercise 20 [ gumbel-utest] ... ok. exercise 21 [ heap-utest] ... ok. exercise 22 [ histogram-utest] ... ok. exercise 23 [ huffman-utest] ... ok. exercise 24 [ hyperexp-utest] ... ok. exercise 25 [ iset-utest] ... ok. exercise 26 [ json-utest] ... ok. exercise 27 [ keyhash-utest] ... ok. exercise 28 [ lognormal-utest] ... ok. exercise 29 [ matrixops-utest] ... ok. exercise 30 [ mem-utest] ... ok. exercise 31 [ minimizer-utest] ... ok. exercise 32 [ mixdchlet-utest] ... ok. exercise 33 [ msa-utest] ... ok. exercise 34 [ msacluster-utest] ... ok. exercise 35 [ msafile] ... ok. exercise 36 [ msafile2] ... ok. exercise 37 [ msafile-a2m] ... ok. exercise 38 [ msafile-afa] ... ok. exercise 39 [ msafile-clustal] ... ok. exercise 40 [ msafile-phylip] ... ok. exercise 41 [ msafile-psiblast] ... ok. exercise 42 [ msafile-selex] ... ok. exercise 43 [ msafile-stockholm] ... ok. exercise 44 [ msaweight-utest] ... ok. exercise 45 [ neon-utest] ... ok. exercise 46 [ normal-utest] ... ok. exercise 47 [ quicksort-utest] ... ok. exercise 48 [ random-utest] ... ok. exercise 49 [ rand64-utest] ... ok. exercise 50 [ randomseq-utest] ... ok. exercise 51 [ ratematrix-utest] ... ok. exercise 52 [ recorder-utest] ... ok. exercise 53 [ red_black-utest] ... ok. exercise 54 [ regexp-utest] ... ok. exercise 55 [ rootfinder-utest] ... ok. exercise 56 [ scorematrix-utest] ... ok. exercise 57 [ sq-utest] ... ok. exercise 58 [ sqio-utest] ... ok. exercise 59 [ sse-utest] ... ok. exercise 60 [ ssi-utest] ... ok. exercise 61 [ stack-utest] ... ok. exercise 62 [ stats-utest] ... ok. exercise 63 [ stretchexp-utest] ... ok. exercise 64 [ tree-utest] ... ok. exercise 65 [ varint-utest] ... ok. exercise 66 [ vectorops-utest] ... ok. exercise 67 [ vmx-utest] ... ok. exercise 68 [ weibull-utest] ... ok. exercise 69 [ wuss-utest] ... ok. exercise 70 [ e2] ... ok. exercise 71 [ degen-residues] ... ok. exercise 72 [ ncbi-indices] ... ok. exercise 73 [ blank-gf] ... ok. exercise 74 [ sindi] ... ok. exercise 75 [ esl-translate] ... ok. exercise 76 [ esl-afetch] ... ok. exercise 77 [ esl-alimanip] ... ok. exercise 78 [ esl-alimap] ... ok. exercise 79 [ esl-alimask] ... ok. exercise 80 [ esl-alimerge] ... ok. exercise 81 [ esl-alistat] ... ok. exercise 82 [ esl-compalign] ... ok. exercise 83 [ esl-construct] ... ok. exercise 84 [ esl-mask] ... ok. exercise 85 [ esl-seqrange] ... ok. exercise 86 [ esl-shuffle] ... ok. exercise 87 [ esl-ssdraw] ... ok. All 87 exercises at level <= 2 passed. System information: Sat Oct 11 17:22:52 UTC 2025 Linux sbuild 6.12.48+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.48-1 (2025-09-20) x86_64 GNU/Linux make[4]: Leaving directory '/build/reproducible-path/hmmer-3.4+dfsg/easel/testsuite' make[3]: Leaving directory '/build/reproducible-path/hmmer-3.4+dfsg/easel' /usr/bin/make -C testsuite check make[3]: Entering directory '/build/reproducible-path/hmmer-3.4+dfsg/testsuite' Running HMMER test suite... exercise 1 [ hmmer] ... ok. exercise 2 [ build] ... ok. exercise 3 [ generic_fwdback] ... ok. exercise 4 [ generic_msv] ... ok. exercise 5 [ generic_stotrace] ... ok. exercise 6 [ generic_viterbi] ... ok. exercise 7 [ hmmd_search_status] ... ok. exercise 8 [ logsum] ... ok. exercise 9 [ modelconfig] ... ok. exercise 10 [ seqmodel] ... ok. exercise 11 [ p7_alidisplay] ... ok. exercise 12 [ p7_bg] ... ok. exercise 13 [ p7_domain] ... ok. exercise 14 [ p7_gmx] ... ok. exercise 15 [ p7_hit] ... ok. exercise 16 [ p7_hmm] ... ok. exercise 17 [ p7_hmmfile] ... ok. exercise 18 [ p7_hmmd_search_stats] ... ok. exercise 19 [ p7_profile] ... ok. exercise 20 [ p7_tophits] ... ok. exercise 21 [ p7_trace] ... ok. exercise 22 [ p7_scoredata] ... ok. exercise 23 [ decoding] ... ok. exercise 24 [ fwdback] ... ok. exercise 25 [ io] ... ok. exercise 26 [ msvfilter] ... ok. exercise 27 [ null2] ... ok. exercise 28 [ optacc] ... ok. exercise 29 [ stotrace] ... ok. exercise 30 [ vitfilter] ... ok. exercise 31 [ hmmpgmd2msa] ... ok. exercise 32 [ hmmalign] ... ok. exercise 33 [ hmmalign/-h] ... ok. exercise 34 [ hmmalign/-o] ... ok. exercise 35 [ hmmalign/--mapali] ... ok. exercise 36 [ hmmalign/--trim] ... ok. exercise 37 [ hmmalign/--amino] ... ok. exercise 38 [ hmmalign/--informat] ... ok. exercise 39 [ hmmalign/--outformat] ... ok. exercise 40 [ hmmbuild] ... ok. exercise 41 [ build/-h] ... ok. exercise 42 [ build/-n] ... ok. exercise 43 [ build/-o] ... ok. exercise 44 [ build/-O] ... ok. exercise 45 [ build/--amino] ... ok. exercise 46 [ build/--dna] ... ok. exercise 47 [ build/--rna] ... ok. exercise 48 [ build/--fast] ... ok. exercise 49 [ build/--hand] ... ok. exercise 50 [ build/--symfrac] ... ok. exercise 51 [ build/--fragthresh] ... ok. exercise 52 [ build/--wpb] ... ok. exercise 53 [ build/--wgsc] ... ok. exercise 54 [ build/--wblosum] ... ok. exercise 55 [ build/--wnone] ... ok. exercise 56 [ build/--wid] ... ok. exercise 57 [ build/--eent] ... ok. exercise 58 [ build/--eclust] ... ok. exercise 59 [ build/--enone] ... ok. exercise 60 [ build/--eset] ... ok. exercise 61 [ build/--ere] ... ok. exercise 62 [ build/--esigma] ... ok. exercise 63 [ build/--eid] ... ok. exercise 64 [ build/--pnone] ... ok. exercise 65 [ build/--plaplace] ... ok. exercise 66 [ build/--EmL] ... ok. exercise 67 [ build/--EmN] ... ok. exercise 68 [ build/--EvL] ... ok. exercise 69 [ build/--EvN] ... ok. exercise 70 [ build/--EfL] ... ok. exercise 71 [ build/--EfN] ... ok. exercise 72 [ build/--Eft] ... ok. exercise 73 [ build/--informat] ... ok. exercise 74 [ build/--seed] ... ok. exercise 75 [ search] ... ok. exercise 76 [ search/-h] ... ok. exercise 77 [ search/-o] ... ok. exercise 78 [ search/-A] ... ok. exercise 79 [ search/--tblout] ... ok. exercise 80 [ search/--domtblout] ... ok. exercise 81 [ search/--pfamtblout] ... ok. exercise 82 [ search/--acc] ... ok. exercise 83 [ search/--noali] ... ok. exercise 84 [ search/--notextw] ... ok. exercise 85 [ search/--textw] ... ok. exercise 86 [ search/-E] ... ok. exercise 87 [ search/-T] ... ok. exercise 88 [ search/--domE] ... ok. exercise 89 [ search/--domT] ... ok. exercise 90 [ search/--incE] ... ok. exercise 91 [ search/--incT] ... ok. exercise 92 [ search/--incdomE] ... ok. exercise 93 [ search/--incdomT] ... ok. exercise 94 [ search/--cut_ga] ... ok. exercise 95 [ search/--cut_nc] ... ok. exercise 96 [ search/--cut_tc] ... ok. exercise 97 [ search/--max] ... ok. exercise 98 [ search/--F1] ... ok. exercise 99 [ search/--F2] ... ok. exercise 100 [ search/--F3] ... ok. exercise 101 [ search/--nobias] ... ok. exercise 102 [ search/--nonull2] ... ok. exercise 103 [ search/-Z] ... ok. exercise 104 [ search/--domZ] ... ok. exercise 105 [ search/--seed] ... ok. exercise 106 [ search/--tformat] ... ok. exercise 107 [ hmmscan] ... ok. exercise 108 [ scan/-h] ... ok. exercise 109 [ scan/-o] ... ok. exercise 110 [ scan/--tblout] ... ok. exercise 111 [ scan/--domtblout] ... ok. exercise 112 [ scan/--pfamtblout] ... ok. exercise 113 [ scan/--acc] ... ok. exercise 114 [ scan/--noali] ... ok. exercise 115 [ scan/--notextw] ... ok. exercise 116 [ scan/--textw] ... ok. exercise 117 [ scan/-E] ... ok. exercise 118 [ scan/-T] ... ok. exercise 119 [ scan/--domE] ... ok. exercise 120 [ scan/--domT] ... ok. exercise 121 [ scan/--incE] ... ok. exercise 122 [ scan/--incT] ... ok. exercise 123 [ scan/--incdomE] ... ok. exercise 124 [ scan/--incdomT] ... ok. exercise 125 [ scan/--incdomT] ... ok. exercise 126 [ scan/--cut_ga] ... ok. exercise 127 [ scan/--cut_nc] ... ok. exercise 128 [ scan/--cut_tc] ... ok. exercise 129 [ scan/--max] ... ok. exercise 130 [ scan/--F1] ... ok. exercise 131 [ scan/--F2] ... ok. exercise 132 [ scan/--F3] ... ok. exercise 133 [ scan/--nobias] ... ok. exercise 134 [ scan/--nonull2] ... ok. exercise 135 [ scan/-Z] ... ok. exercise 136 [ scan/--domZ] ... ok. exercise 137 [ scan/--seed] ... ok. exercise 138 [ scan/--qformat] ... ok. exercise 139 [ scan/--cpu] ... ok. exercise 140 [ jackhmmer] ... ok. exercise 141 [ j/-h] ... ok. exercise 142 [ j/-N] ... ok. exercise 143 [ j/-o] ... ok. exercise 144 [ j/-A] ... ok. exercise 145 [ j/--tblout] ... ok. exercise 146 [ j/--domtblout] ... ok. exercise 147 [ j/--chkhmm] ... ok. exercise 148 [ j/--chkali] ... ok. exercise 149 [ j/--acc] ... ok. exercise 150 [ j/--noali] ... ok. exercise 151 [ j/--notextw] ... ok. exercise 152 [ j/--textw] ... ok. exercise 153 [ j/--popen] ... ok. exercise 154 [ j/--pextend] ... ok. exercise 155 [ j/--mxfile] ... ok. exercise 156 [ j/-E] ... ok. exercise 157 [ j/-T] ... ok. exercise 158 [ j/--domE] ... ok. exercise 159 [ j/--domT] ... ok. exercise 160 [ j/--incE] ... ok. exercise 161 [ j/--incT] ... ok. exercise 162 [ j/--incdomE] ... ok. exercise 163 [ j/--incdomT] ... ok. exercise 164 [ j/--max] ... ok. exercise 165 [ j/--F1] ... ok. exercise 166 [ j/--F2] ... ok. exercise 167 [ j/--F3] ... ok. exercise 168 [ j/--nobias] ... ok. exercise 169 [ j/--EmL] ... ok. exercise 170 [ j/--EmN] ... ok. exercise 171 [ j/--EvL] ... ok. exercise 172 [ j/--EvN] ... ok. exercise 173 [ j/--EfL] ... ok. exercise 174 [ j/--EfN] ... ok. exercise 175 [ j/--Eft] ... ok. exercise 176 [ j/--nonull2] ... ok. exercise 177 [ j/-Z] ... ok. exercise 178 [ j/--domZ] ... ok. exercise 179 [ j/--seed] ... ok. exercise 180 [ j/--qformat] ... ok. exercise 181 [ j/--tformat] ... ok. exercise 182 [ phmmer] ... ok. exercise 183 [ phmmer/-h] ... ok. exercise 184 [ phmmer/-o] ... ok. exercise 185 [ phmmer/-A] ... ok. exercise 186 [ phmmer/--tblout] ... ok. exercise 187 [ phmmer/--domtblout] ... ok. exercise 188 [ phmmer/--pfamtblout] ... ok. exercise 189 [ phmmer/--acc] ... ok. exercise 190 [ phmmer/--noali] ... ok. exercise 191 [ phmmer/--notextw] ... ok. exercise 192 [ phmmer/--textw] ... ok. exercise 193 [ phmmer/--popen] ... ok. exercise 194 [ phmmer/--pextend] ... ok. exercise 195 [ phmmer/--mxfile] ... ok. exercise 196 [ phmmer/-E] ... ok. exercise 197 [ phmmer/-T] ... ok. exercise 198 [ phmmer/--domE] ... ok. exercise 199 [ phmmer/--domT] ... ok. exercise 200 [ phmmer/--incE] ... ok. exercise 201 [ phmmer/--incT] ... ok. exercise 202 [ phmmer/--incdomE] ... ok. exercise 203 [ phmmer/--incdomT] ... ok. exercise 204 [ phmmer/--max] ... ok. exercise 205 [ phmmer/--F1] ... ok. exercise 206 [ phmmer/--F2] ... ok. exercise 207 [ phmmer/--F3] ... ok. exercise 208 [ phmmer/--nobias] ... ok. exercise 209 [ phmmer/--EmL] ... ok. exercise 210 [ phmmer/--EmN] ... ok. exercise 211 [ phmmer/--EvL] ... ok. exercise 212 [ phmmer/--EvN] ... ok. exercise 213 [ phmmer/--EfL] ... ok. exercise 214 [ phmmer/--EfN] ... ok. exercise 215 [ phmmer/--Eft] ... ok. exercise 216 [ phmmer/--nonull2] ... ok. exercise 217 [ phmmer/-Z] ... ok. exercise 218 [ phmmer/--domZ] ... ok. exercise 219 [ phmmer/--seed] ... ok. exercise 220 [ phmmer/--qformat] ... ok. exercise 221 [ phmmer/--tformat] ... ok. exercise 222 [ nhmmer] ... ok. exercise 223 [ nhmmer/-h] ... ok. exercise 224 [ nhmmer/-o] ... ok. exercise 225 [ nhmmer/-A] ... ok. exercise 226 [ nhmmer/--tblout] ... ok. exercise 227 [ nhmmer/--dfamtblout] ... ok. exercise 228 [ nhmmer/--acc] ... ok. exercise 229 [ nhmmer/--noali] ... ok. exercise 230 [ nhmmer/--notextw] ... ok. exercise 231 [ nhmmer/--textw] ... ok. exercise 232 [ nhmmer/-E] ... ok. exercise 233 [ nhmmer/-T] ... ok. exercise 234 [ nhmmer/--incE] ... ok. exercise 235 [ nhmmer/--incT] ... ok. exercise 236 [ nhmmer/--max] ... ok. exercise 237 [ nhmmer/--F1] ... ok. exercise 238 [ nhmmer/--F2] ... ok. exercise 239 [ nhmmer/--F3] ... ok. exercise 240 [ nhmmer/--nobias] ... ok. exercise 241 [ nhmmer/--nonull2] ... ok. exercise 242 [ nhmmer/-Z] ... ok. exercise 243 [ nhmmer/--seed] ... ok. exercise 244 [ nhmmscan] ... ok. exercise 245 [ nhmmscan/-h] ... ok. exercise 246 [ nhmmscan/-o] ... ok. exercise 247 [ nhmmscan/--tblout] ... ok. exercise 248 [nhmmscan/--dfamtblout] ... ok. exercise 249 [ nhmmscan/--acc] ... ok. exercise 250 [ nhmmscan/--noali] ... ok. exercise 251 [ nhmmscan/--notextw] ... ok. exercise 252 [ nhmmscan/--textw] ... ok. exercise 253 [ nhmmscan/-E] ... ok. exercise 254 [ nhmmscan/-T] ... ok. exercise 255 [ nhmmscan/--incE] ... ok. exercise 256 [ nhmmscan/--incT] ... ok. exercise 257 [ nhmmscan/--max] ... ok. exercise 258 [ nhmmscan/--F1] ... ok. exercise 259 [ nhmmscan/--F2] ... ok. exercise 260 [ nhmmscan/--F3] ... ok. exercise 261 [ nhmmscan/--nobias] ... ok. exercise 262 [ nhmmscan/--nonull2] ... ok. exercise 263 [ nhmmscan/-Z] ... ok. exercise 264 [ nhmmscan/--seed] ... ok. exercise 265 [ hmmemit] ... ok. exercise 266 [ hmmemit/-h] ... ok. exercise 267 [ hmmemit/-c] ... ok. exercise 268 [ hmmemit/-o] ... ok. exercise 269 [ hmmemit/-p] ... ok. exercise 270 [ hmmemit/-N] ... ok. exercise 271 [ hmmemit/-L] ... ok. exercise 272 [ hmmemit/--local] ... ok. exercise 273 [ hmmemit/--unilocal] ... ok. exercise 274 [ hmmemit/--glocal] ... ok. exercise 275 [ hmmemit/--uniglocal] ... ok. exercise 276 [ hmmfetch] ... ok. exercise 277 [ hmmstat] ... ok. exercise 278 [ hmmlogo] ... ok. exercise 279 [ hmmconvert] ... ok. exercise 280 [ hmmsim] ... ok. exercise 281 [ hmmbuild_variation] ... ok. exercise 282 [ hmmscan_variation] ... ok. exercise 283 [ hmmsearch_variation] ... ok. exercise 284 [ phmmer_variation] ... ok. exercise 285 [ mapali] ... ok. exercise 286 [ fragments] ... ok. exercise 287 [ nonresidues] ... ok. exercise 288 [ opt-annotation] ... ok. exercise 289 [ dup-names] ... ok. exercise 290 [ mapali-again] ... ok. exercise 291 [ delete-corruption] ... ok. exercise 292 [ msa-integrity] ... ok. exercise 293 [ hmmemit-consensus] ... ok. exercise 294 [ hmmconvert] ... ok. exercise 295 [ stdin_pipes] ... ok. exercise 296 [ nhmmer_generic] ... ok. exercise 297 [ hmmpgmd_ga] ... ok. exercise 298 [ rewind] ... ok. exercise 299 [ hmmpgmd_shard_ga] ... ok. exercise 300 [ bad-fasta] ... ok. exercise 301 [ brute-itest] ... ok. exercise 302 [ hmmpress-itest] ... ok. exercise 303 [ h39] ... ok. exercise 304 [ h45] ... ok. exercise 305 [ h50] ... ok. exercise 306 [ h82] ... ok. exercise 307 [ iss159] ... ok. All 307 exercises at level <= 2 passed. System information: Sat Oct 11 17:23:09 UTC 2025 Linux sbuild 6.12.48+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.48-1 (2025-09-20) x86_64 GNU/Linux make[3]: Leaving directory '/build/reproducible-path/hmmer-3.4+dfsg/testsuite' make[2]: Leaving directory '/build/reproducible-path/hmmer-3.4+dfsg' if tail -n 6 debian/test_log | head -n 1 | grep -q FAILED ; then false ; fi make[1]: Leaving directory '/build/reproducible-path/hmmer-3.4+dfsg' create-stamp debian/debhelper-build-stamp dh_prep -a dh_auto_install -a make -j6 install DESTDIR=/build/reproducible-path/hmmer-3.4\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/build/reproducible-path/hmmer-3.4+dfsg' make -C easel all make[2]: Entering directory '/build/reproducible-path/hmmer-3.4+dfsg/easel' make -C miniapps all make[3]: Entering directory '/build/reproducible-path/hmmer-3.4+dfsg/easel/miniapps' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/reproducible-path/hmmer-3.4+dfsg/easel/miniapps' make[2]: Leaving directory '/build/reproducible-path/hmmer-3.4+dfsg/easel' make -C src all make[2]: Entering directory '/build/reproducible-path/hmmer-3.4+dfsg/src' make -C impl_sse libhmmer-impl.stamp make[3]: Entering directory '/build/reproducible-path/hmmer-3.4+dfsg/src/impl_sse' make[3]: 'libhmmer-impl.stamp' is up to date. make[3]: Leaving directory '/build/reproducible-path/hmmer-3.4+dfsg/src/impl_sse' make[2]: Leaving directory '/build/reproducible-path/hmmer-3.4+dfsg/src' make -C profmark all make[2]: Entering directory '/build/reproducible-path/hmmer-3.4+dfsg/profmark' make[2]: Nothing to be done for 'all'. make[2]: Leaving directory '/build/reproducible-path/hmmer-3.4+dfsg/profmark' if [ ! -d /build/reproducible-path/hmmer-3.4+dfsg/debian/tmp/usr/bin ]; then /usr/bin/install -c -d /build/reproducible-path/hmmer-3.4+dfsg/debian/tmp/usr/bin; fi if [ ! -d /build/reproducible-path/hmmer-3.4+dfsg/debian/tmp/usr/share/man/man1 ]; then /usr/bin/install -c -d /build/reproducible-path/hmmer-3.4+dfsg/debian/tmp/usr/share/man/man1; fi make -C src install make[2]: Entering directory '/build/reproducible-path/hmmer-3.4+dfsg/src' for file in alimask hmmalign hmmbuild hmmconvert hmmemit hmmfetch hmmlogo hmmpgmd hmmpgmd_shard hmmpress hmmscan hmmsearch hmmsim hmmstat jackhmmer phmmer nhmmer nhmmscan makehmmerdb; do \ /usr/bin/install -c -m 0755 $file /build/reproducible-path/hmmer-3.4+dfsg/debian/tmp/usr/bin/ ;\ done make[2]: Leaving directory '/build/reproducible-path/hmmer-3.4+dfsg/src' make -C documentation install make[2]: Entering directory '/build/reproducible-path/hmmer-3.4+dfsg/documentation' make -C man install make[3]: Entering directory '/build/reproducible-path/hmmer-3.4+dfsg/documentation/man' for file in hmmer hmmalign hmmbuild hmmconvert hmmemit hmmfetch hmmlogo hmmpgmd hmmpgmd_shard hmmpress hmmscan hmmsearch hmmsim hmmstat jackhmmer makehmmerdb phmmer nhmmer nhmmscan alimask; do \ /usr/bin/install -c -m 0664 $file.man /build/reproducible-path/hmmer-3.4+dfsg/debian/tmp/usr/share/man/man1/${file}.1 ;\ done make[3]: Leaving directory '/build/reproducible-path/hmmer-3.4+dfsg/documentation/man' make[2]: Leaving directory '/build/reproducible-path/hmmer-3.4+dfsg/documentation' make[1]: Leaving directory '/build/reproducible-path/hmmer-3.4+dfsg' debian/rules execute_after_dh_auto_install make[1]: Entering directory '/build/reproducible-path/hmmer-3.4+dfsg' mkdir -p /build/reproducible-path/hmmer-3.4+dfsg/debian/hmmer/usr/lib/x86_64-linux-gnu/hmmer/ cp src/hmmc2 /build/reproducible-path/hmmer-3.4+dfsg/debian/hmmer/usr/lib/x86_64-linux-gnu/hmmer/ make[1]: Leaving directory '/build/reproducible-path/hmmer-3.4+dfsg' dh_install -a dh_installdocs -a dh_installchangelogs -a debian/rules execute_after_dh_installexamples make[1]: Entering directory '/build/reproducible-path/hmmer-3.4+dfsg' mkdir -p /build/reproducible-path/hmmer-3.4+dfsg/debian/hmmer-examples/usr/share/doc/hmmer/examples/src/impl find src/ -maxdepth 1 -name "*_utest" -exec cp \{\} /build/reproducible-path/hmmer-3.4+dfsg/debian/hmmer-examples/usr/share/doc/hmmer/examples/src/ \; find src/impl_sse -name "*_utest" -exec cp \{\} /build/reproducible-path/hmmer-3.4+dfsg/debian/hmmer-examples/usr/share/doc/hmmer/examples/src/impl \; cp src/itest_brute /build/reproducible-path/hmmer-3.4+dfsg/debian/hmmer-examples/usr/share/doc/hmmer/examples/src cp src/hmmpress.itest.pl /build/reproducible-path/hmmer-3.4+dfsg/debian/hmmer-examples/usr/share/doc/hmmer/examples/src cp -aR testsuite /build/reproducible-path/hmmer-3.4+dfsg/debian/hmmer-examples/usr/share/doc/hmmer/examples find easel -name "*.o" -delete cp -aR easel /build/reproducible-path/hmmer-3.4+dfsg/debian/hmmer-examples/usr/share/doc/hmmer/examples cp -aR tutorial /build/reproducible-path/hmmer-3.4+dfsg/debian/hmmer-examples/usr/share/doc/hmmer/examples find /build/reproducible-path/hmmer-3.4+dfsg/debian/hmmer-examples/usr/share/doc/hmmer/examples -name 'Makefile' | xargs sed -i "s^/build/reproducible-path/hmmer-3.4+dfsg^.^g" find /build/reproducible-path/hmmer-3.4+dfsg/debian/hmmer-examples/usr/share/doc/hmmer/examples -name "esltmp*" -delete make[1]: Leaving directory '/build/reproducible-path/hmmer-3.4+dfsg' dh_installman -a dh_perl -a dh_link -a dh_strip_nondeterminism -a debian/rules override_dh_compress make[1]: Entering directory '/build/reproducible-path/hmmer-3.4+dfsg' dh_compress -Xtutorial/ make[1]: Leaving directory '/build/reproducible-path/hmmer-3.4+dfsg' dh_fixperms -a debian/rules execute_after_dh_fixperms make[1]: Entering directory '/build/reproducible-path/hmmer-3.4+dfsg' find debian -name .dropbox.attr -delete find debian -name "*.fa" -executable -exec chmod -x \{\} \; find /build/reproducible-path/hmmer-3.4+dfsg/debian/hmmer-examples/usr/share/doc/hmmer/examples -name "*.man" -exec chmod -x \{\} \; make[1]: Leaving directory '/build/reproducible-path/hmmer-3.4+dfsg' dh_missing -a dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'hmmer-dbgsym' in '../hmmer-dbgsym_3.4+dfsg-3_amd64.deb'. dpkg-deb: building package 'hmmer-examples' in '../hmmer-examples_3.4+dfsg-3_amd64.deb'. dpkg-deb: building package 'hmmer' in '../hmmer_3.4+dfsg-3_amd64.deb'. dpkg-genbuildinfo --build=any -O../hmmer_3.4+dfsg-3_amd64.buildinfo dpkg-genchanges --build=any -O../hmmer_3.4+dfsg-3_amd64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-source: info: using options from hmmer-3.4+dfsg/debian/source/options: --extend-diff-ignore=(^|/)config.(sub|guess)$ dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2025-10-11T17:23:58Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes Sat, 11 Oct 2025 17:23:58 +0000 | +------------------------------------------------------------------------------+ hmmer_3.4+dfsg-3_amd64.changes: ------------------------------- Format: 1.8 Date: Mon, 29 Sep 2025 14:45:00 +0200 Source: hmmer Binary: hmmer hmmer-dbgsym hmmer-examples Architecture: amd64 Version: 3.4+dfsg-3 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Santiago Vila Description: hmmer - profile hidden Markov models for protein sequence analysis hmmer-examples - profile hidden Markov models for protein sequence analysis (examp Closes: 1103312 Changes: hmmer (3.4+dfsg-3) unstable; urgency=medium . * Team upload. . [ Michael R. Crusoe ] * d/rules: use DEB_BUILD_OPTION_PARALLEL instead of nproc to respect Debian Policy 4.9.1. . [ Santiago Vila ] * d/rules: Put V=VERBOSE at the beginning to be used in all targets. * d/rules: Do not filter nocheck in override_dh_auto_test, dh already does that. * d/rules: make tests after dh_auto_build, required by dh_installexamples. Fixes FTBFS when built with nocheck build profile. Closes: #1103312. * d/rules: Use execute_after_* where possible. * d/salsa-ci.yml: Use the simplified form. * d/salsa-ci.yml: Disable reprotest job, it does not work. * d/salsa-ci.yml: Enable nocheck build profile job. * d/control: Drop "Rules-Required-Root: no", no longer needed. * d/control: Update standards-version. Checksums-Sha1: 0280ea782d252a4b9953df693b805ad00dca276b 12608264 hmmer-dbgsym_3.4+dfsg-3_amd64.deb e756d22573d3252a321bd080e5f2e73232e566d8 32413052 hmmer-examples_3.4+dfsg-3_amd64.deb e401e917f45c23242c97d3e54bc3b9a0a344ba2c 5485 hmmer_3.4+dfsg-3_amd64.buildinfo 287a5febab91877481b0d46b0433cfcab2ab60ae 1079216 hmmer_3.4+dfsg-3_amd64.deb Checksums-Sha256: 771e33afa8d038150854989aa626e478b7dffaea06d8dd205b222a9dc1d2b151 12608264 hmmer-dbgsym_3.4+dfsg-3_amd64.deb eb591857e97782323d47bf45174070b370f0e75d62477836314c48d76babefc0 32413052 hmmer-examples_3.4+dfsg-3_amd64.deb 7cbef0131c61742d8049d31803ab9d20b490abe905228a086f28d2fa5db0dd09 5485 hmmer_3.4+dfsg-3_amd64.buildinfo 78d7d811d6c322b4321e68f240554297216604f84334a6d69a8dc2b4567274e3 1079216 hmmer_3.4+dfsg-3_amd64.deb Files: f98ae25771d87be51e008bba6d3cc711 12608264 debug optional hmmer-dbgsym_3.4+dfsg-3_amd64.deb da1c4e6bed0638f73b0067ba8057449c 32413052 doc optional hmmer-examples_3.4+dfsg-3_amd64.deb 22433f53d1607469c79e7eba65ac21ea 5485 science optional hmmer_3.4+dfsg-3_amd64.buildinfo 2b2c5dd4b3d13b217ed8b752da52997b 1079216 science optional hmmer_3.4+dfsg-3_amd64.deb +------------------------------------------------------------------------------+ | Buildinfo Sat, 11 Oct 2025 17:23:59 +0000 | +------------------------------------------------------------------------------+ Format: 1.0 Source: hmmer Binary: hmmer hmmer-dbgsym hmmer-examples Architecture: amd64 Version: 3.4+dfsg-3 Checksums-Md5: f98ae25771d87be51e008bba6d3cc711 12608264 hmmer-dbgsym_3.4+dfsg-3_amd64.deb da1c4e6bed0638f73b0067ba8057449c 32413052 hmmer-examples_3.4+dfsg-3_amd64.deb 2b2c5dd4b3d13b217ed8b752da52997b 1079216 hmmer_3.4+dfsg-3_amd64.deb Checksums-Sha1: 0280ea782d252a4b9953df693b805ad00dca276b 12608264 hmmer-dbgsym_3.4+dfsg-3_amd64.deb e756d22573d3252a321bd080e5f2e73232e566d8 32413052 hmmer-examples_3.4+dfsg-3_amd64.deb 287a5febab91877481b0d46b0433cfcab2ab60ae 1079216 hmmer_3.4+dfsg-3_amd64.deb Checksums-Sha256: 771e33afa8d038150854989aa626e478b7dffaea06d8dd205b222a9dc1d2b151 12608264 hmmer-dbgsym_3.4+dfsg-3_amd64.deb eb591857e97782323d47bf45174070b370f0e75d62477836314c48d76babefc0 32413052 hmmer-examples_3.4+dfsg-3_amd64.deb 78d7d811d6c322b4321e68f240554297216604f84334a6d69a8dc2b4567274e3 1079216 hmmer_3.4+dfsg-3_amd64.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Sat, 11 Oct 2025 17:23:57 +0000 Build-Path: /build/reproducible-path/hmmer-3.4+dfsg Installed-Build-Depends: autoconf (= 2.72-3.1), automake (= 1:1.17-4), autopoint (= 0.23.1-2), autotools-dev (= 20240727.1), base-files (= 14), base-passwd (= 3.6.7), bash (= 5.3-1), binutils (= 2.45-7), binutils-common (= 2.45-7), binutils-x86-64-linux-gnu (= 2.45-7), bsdextrautils (= 2.41.2-2), build-essential (= 12.12), bzip2 (= 1.0.8-6), coreutils (= 9.7-3), cpp (= 4:15.2.0-4), cpp-15 (= 15.2.0-4), cpp-15-x86-64-linux-gnu (= 15.2.0-4), cpp-x86-64-linux-gnu (= 4:15.2.0-4), dash (= 0.5.12-12), debconf (= 1.5.91), debhelper (= 13.28), debianutils (= 5.23.2), dh-autoreconf (= 21), dh-strip-nondeterminism (= 1.15.0-1), diffutils (= 1:3.10-4), dpkg (= 1.22.21), dpkg-dev (= 1.22.21), dwz (= 0.16-2), file (= 1:5.46-5), findutils (= 4.10.0-3), g++ (= 4:15.2.0-4), g++-15 (= 15.2.0-4), g++-15-x86-64-linux-gnu (= 15.2.0-4), g++-x86-64-linux-gnu (= 4:15.2.0-4), gcc (= 4:15.2.0-4), gcc-15 (= 15.2.0-4), gcc-15-base (= 15.2.0-4), gcc-15-x86-64-linux-gnu (= 15.2.0-4), gcc-x86-64-linux-gnu (= 4:15.2.0-4), gettext (= 0.23.1-2+b1), gettext-base (= 0.23.1-2+b1), grep (= 3.12-1), groff-base (= 1.23.0-9), gzip (= 1.13-1), hostname (= 3.25), init-system-helpers (= 1.69), intltool-debian (= 0.35.0+20060710.6), libacl1 (= 2.3.2-2+b1), libarchive-zip-perl (= 1.68-1), libasan8 (= 15.2.0-4), libatomic1 (= 15.2.0-4), libattr1 (= 1:2.5.2-3), libaudit-common (= 1:4.1.2-1), libaudit1 (= 1:4.1.2-1), libbinutils (= 2.45-7), libblkid1 (= 2.41.2-2), libbz2-1.0 (= 1.0.8-6), libc-bin (= 2.41-12), libc-dev-bin (= 2.41-12), libc6 (= 2.41-12), libc6-dev (= 2.41-12), libcap-ng0 (= 0.8.5-4+b1), libcap2 (= 1:2.75-10+b1), libcc1-0 (= 15.2.0-4), libcrypt-dev (= 1:4.4.38-1), libcrypt1 (= 1:4.4.38-1), libctf-nobfd0 (= 2.45-7), libctf0 (= 2.45-7), libdb5.3t64 (= 5.3.28+dfsg2-9), libdebconfclient0 (= 0.280), libdebhelper-perl (= 13.28), libdivsufsort-dev (= 2.0.1-6+b1), libdivsufsort3 (= 2.0.1-6+b1), libdpkg-perl (= 1.22.21), libelf1t64 (= 0.193-3), libexpat1 (= 2.7.3-1), libffi8 (= 3.5.2-2), libfile-stripnondeterminism-perl (= 1.15.0-1), libgcc-15-dev (= 15.2.0-4), libgcc-s1 (= 15.2.0-4), libgdbm-compat4t64 (= 1.26-1), libgdbm6t64 (= 1.26-1), libgmp10 (= 2:6.3.0+dfsg-5), libgomp1 (= 15.2.0-4), libgprofng0 (= 2.45-7), libhwasan0 (= 15.2.0-4), libisl23 (= 0.27-1), libitm1 (= 15.2.0-4), libjansson4 (= 2.14-2+b3), liblsan0 (= 15.2.0-4), liblzma5 (= 5.8.1-1.1), libmagic-mgc (= 1:5.46-5), libmagic1t64 (= 1:5.46-5), libmd0 (= 1.1.0-2+b1), libmount1 (= 2.41.2-2), libmpc3 (= 1.3.1-2), libmpfr6 (= 4.2.2-2), libncursesw6 (= 6.5+20250216-2), libpam-modules (= 1.7.0-5), libpam-modules-bin (= 1.7.0-5), libpam-runtime (= 1.7.0-5), libpam0g (= 1.7.0-5), libpcre2-8-0 (= 10.46-1), libperl5.40 (= 5.40.1-6), libpipeline1 (= 1.5.8-1), libpython3-stdlib (= 3.13.7-1), libpython3.13-minimal (= 3.13.7-1), libpython3.13-stdlib (= 3.13.7-1), libquadmath0 (= 15.2.0-4), libreadline8t64 (= 8.3-3), libseccomp2 (= 2.6.0-2), libselinux1 (= 3.8.1-1), libsframe2 (= 2.45-7), libsmartcols1 (= 2.41.2-2), libsqlite3-0 (= 3.46.1-8), libssl3t64 (= 3.5.3-1), libstdc++-15-dev (= 15.2.0-4), libstdc++6 (= 15.2.0-4), libsystemd0 (= 258-1), libtinfo6 (= 6.5+20250216-2), libtool (= 2.5.4-5), libtsan2 (= 15.2.0-4), libubsan1 (= 15.2.0-4), libuchardet0 (= 0.0.8-2), libudev1 (= 258-1), libunistring5 (= 1.3-2), libuuid1 (= 2.41.2-2), libxml2-16 (= 2.14.5+dfsg-0.2), libzstd1 (= 1.5.7+dfsg-1.1), linux-libc-dev (= 6.16.9-1), m4 (= 1.4.20-1), make (= 4.4.1-2), man-db (= 2.13.1-1), mawk (= 1.3.4.20250131-1), media-types (= 13.0.0), ncurses-base (= 6.5+20250216-2), ncurses-bin (= 6.5+20250216-2), netbase (= 6.5), openssl-provider-legacy (= 3.5.3-1), patch (= 2.8-2), perl (= 5.40.1-6), perl-base (= 5.40.1-6), perl-modules-5.40 (= 5.40.1-6), po-debconf (= 1.0.21+nmu1), python3 (= 3.13.7-1), python3-minimal (= 3.13.7-1), python3.13 (= 3.13.7-1), python3.13-minimal (= 3.13.7-1), readline-common (= 8.3-3), rpcsvc-proto (= 1.4.3-1), sed (= 4.9-2), sensible-utils (= 0.0.26), sysvinit-utils (= 3.14-4), tar (= 1.35+dfsg-3.1), tzdata (= 2025b-5), util-linux (= 2.41.2-2), xz-utils (= 5.8.1-1.1), zlib1g (= 1:1.3.dfsg+really1.3.1-1+b1) Environment: DEB_BUILD_OPTIONS="parallel=6" LANG="C.UTF-8" LC_COLLATE="C.UTF-8" LC_CTYPE="C.UTF-8" SOURCE_DATE_EPOCH="1759149900" +------------------------------------------------------------------------------+ | Package contents Sat, 11 Oct 2025 17:23:59 +0000 | +------------------------------------------------------------------------------+ hmmer-dbgsym_3.4+dfsg-3_amd64.deb --------------------------------- new Debian package, version 2.0. size 12608264 bytes: control archive=1504 bytes. 1149 bytes, 12 lines control 2202 bytes, 21 lines md5sums Package: hmmer-dbgsym Source: hmmer Version: 3.4+dfsg-3 Auto-Built-Package: debug-symbols Architecture: amd64 Maintainer: Debian Med Packaging Team Installed-Size: 13689 Depends: hmmer (= 3.4+dfsg-3) Section: debug Priority: optional Description: debug symbols for hmmer Build-Ids: 0cf987a1008e436b51c7f6655f171645c3299e79 0fedb528bcd093c20d4eb8c7da5eb872be73c9c8 18baa51bb9415c3f258d81901f44c37caead191f 2a4b0fc53fe6e4a5adcfd1b78515f95b7eb9b00f 3c9d7ade286098f9539a98c056d49a9ff9628dca 4ed358b9527209283f790d62310e73dee5957485 510bac4339a5433f0919453ee752cf977642cdae 528a034e53ccc666e5a6a520b553e28c6d21dd9e 5ed458f56793470d5a5638d5a60c6b0c4db46af1 70b156456b014d0522dd12c6ab2947a7242d2e09 735d0d883beb87a2a0a6d8698e8707d2c868d9a4 89a1e01baa27ded3fb178d9733a2c1bbc374b98c 8f1388da03123f291b9a9f6f480eddeba34eb21a 97068f8ebd5b70aa258f033e639cf26f9db886ff 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bytes: control archive=18328 bytes. 864 bytes, 22 lines control 68891 bytes, 749 lines md5sums Package: hmmer-examples Source: hmmer Version: 3.4+dfsg-3 Architecture: amd64 Maintainer: Debian Med Packaging Team Installed-Size: 33375 Depends: libperl4-corelibs-perl Section: doc Priority: optional Multi-Arch: foreign Homepage: http://hmmer.org/ Description: profile hidden Markov models for protein sequence analysis (examples) HMMER is an implementation of profile hidden Markov model methods for sensitive searches of biological sequence databases using multiple sequence alignments as queries. . Given a multiple sequence alignment as input, HMMER builds a statistical model called a "hidden Markov model" which can then be used as a query into a sequence database to find (and/or align) additional homologues of the sequence family. . 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md5sums Package: hmmer Version: 3.4+dfsg-3 Architecture: amd64 Maintainer: Debian Med Packaging Team Installed-Size: 6490 Depends: libc6 (>= 2.38), libdivsufsort3 (>= 2.0.1) Suggests: hmmer-doc (>= 3.4+dfsg-3) Section: science Priority: optional Homepage: http://hmmer.org/ Description: profile hidden Markov models for protein sequence analysis HMMER is an implementation of profile hidden Markov model methods for sensitive searches of biological sequence databases using multiple sequence alignments as queries. . 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+------------------------------------------------------------------------------+ | Post Build Sat, 11 Oct 2025 17:24:02 +0000 | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup Sat, 11 Oct 2025 17:24:02 +0000 | +------------------------------------------------------------------------------+ Purging /build/reproducible-path Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary Sat, 11 Oct 2025 17:24:04 +0000 | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Type: any Build-Space: 290572 Build-Time: 270 Distribution: unstable Host Architecture: amd64 Install-Time: 4 Job: /srv/rebuilderd/tmp/rebuilderdf83S52/inputs/hmmer_3.4+dfsg-3.dsc Machine Architecture: amd64 Package: hmmer Package-Time: 285 Source-Version: 3.4+dfsg-3 Space: 290572 Status: successful Version: 3.4+dfsg-3 -------------------------------------------------------------------------------- Finished at 2025-10-11T17:23:58Z Build needed 00:04:45, 290572k disk space build artifacts stored in /srv/rebuilderd/tmp/rebuilderdf83S52/out checking hmmer-dbgsym_3.4+dfsg-3_amd64.deb: size... sha256... sha1... md5... all OK size differs for hmmer-examples_3.4+dfsg-3_amd64.deb checking hmmer-examples_3.4+dfsg-3_amd64.deb: