=============================================================================== About this build: this rebuild has been done as part of reproduce.debian.net where we aim to reproduce Debian binary packages distributed via ftp.debian.org, by rebuilding using the exact same packages as the original build on the buildds, as described in the relevant .buildinfo file from buildinfos.debian.net. For more information please go to https://reproduce.debian.net or join #debian-reproducible on irc.debian.org =============================================================================== Preparing download of sources for /srv/rebuilderd/tmp/rebuilderdslyB5w/inputs/r-base_4.5.0-3_arm64.buildinfo Source: r-base Version: 4.5.0-3 rebuilderd-worker node: codethink02-arm64 +------------------------------------------------------------------------------+ | Downloading sources Mon, 21 Jul 2025 15:15:08 +0000 | +------------------------------------------------------------------------------+ Get:1 https://deb.debian.org/debian trixie InRelease [168 kB] Get:2 https://deb.debian.org/debian sid InRelease [213 kB] Get:3 https://deb.debian.org/debian trixie/main Sources [10.5 MB] Get:4 https://deb.debian.org/debian sid/main Sources [11.0 MB] Fetched 21.9 MB in 3s (7771 kB/s) Reading package lists... 'https://deb.debian.org/debian/pool/main/r/r-base/r-base_4.5.0-3.dsc' r-base_4.5.0-3.dsc 2906 SHA256:5c62f851115924872d7d057b16f1a50d61bd02917751d99d33013cb82e6f9967 'https://deb.debian.org/debian/pool/main/r/r-base/r-base_4.5.0.orig.tar.gz' r-base_4.5.0.orig.tar.gz 40466335 SHA256:3b33ea113e0d1ddc9793874d5949cec2c7386f66e4abfb1cef9aec22846c3ce1 'https://deb.debian.org/debian/pool/main/r/r-base/r-base_4.5.0-3.debian.tar.xz' r-base_4.5.0-3.debian.tar.xz 100824 SHA256:acbde33497a5ebffb529d91dd09e98d833c4cd46b8bbbda13143b1e34bc83d4d 3b33ea113e0d1ddc9793874d5949cec2c7386f66e4abfb1cef9aec22846c3ce1 r-base_4.5.0.orig.tar.gz acbde33497a5ebffb529d91dd09e98d833c4cd46b8bbbda13143b1e34bc83d4d r-base_4.5.0-3.debian.tar.xz 5c62f851115924872d7d057b16f1a50d61bd02917751d99d33013cb82e6f9967 r-base_4.5.0-3.dsc +------------------------------------------------------------------------------+ | Calling debrebuild Mon, 21 Jul 2025 15:15:14 +0000 | +------------------------------------------------------------------------------+ Rebuilding r-base=4.5.0-3 in /srv/rebuilderd/tmp/rebuilderdslyB5w/inputs now. + nice /usr/bin/debrebuild --buildresult=/srv/rebuilderd/tmp/rebuilderdslyB5w/out --builder=sbuild+unshare --cache=/srv/rebuilderd/cache -- /srv/rebuilderd/tmp/rebuilderdslyB5w/inputs/r-base_4.5.0-3_arm64.buildinfo /srv/rebuilderd/tmp/rebuilderdslyB5w/inputs/r-base_4.5.0-3_arm64.buildinfo contains a GPG signature which has NOT been validated Using defined Build-Path: /build/reproducible-path/r-base-4.5.0 I: verifying dsc... successful! Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie InRelease [175 kB] Get:2 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 Packages [9616 kB] Fetched 9792 kB in 1s (9264 kB/s) Reading package lists... W: http://snapshot.debian.org/archive/debian/20250509T030417Z/dists/trixie/InRelease: Loading /etc/apt/trusted.gpg from deprecated option Dir::Etc::Trusted Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libglvnd0 arm64 1.7.0-1+b2 [41.6 kB] Fetched 41.6 kB in 0s (2286 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpaq4zi6gh/libglvnd0_1.7.0-1+b2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 procps arm64 2:4.0.4-8 [873 kB] Fetched 873 kB in 0s (36.8 MB/s) dpkg-name: info: moved 'procps_2%3a4.0.4-8_arm64.deb' to '/srv/rebuilderd/tmp/tmpf1j7jfyr/procps_4.0.4-8_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libmpfr6 arm64 4.2.2-1 [685 kB] Fetched 685 kB in 0s (30.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphoqdrxnb/libmpfr6_4.2.2-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libldap2 arm64 2.6.9+dfsg-2 [179 kB] Fetched 179 kB in 0s (10.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpei9j2rj5/libldap2_2.6.9+dfsg-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 xvfb arm64 2:21.1.16-1 [3122 kB] Fetched 3122 kB in 0s (75.6 MB/s) dpkg-name: info: moved 'xvfb_2%3a21.1.16-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpj1f2rkrz/xvfb_21.1.16-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 fonts-dejavu-mono all 2.37-8 [489 kB] Fetched 489 kB in 0s (21.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnl3h4vcz/fonts-dejavu-mono_2.37-8_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libhogweed6t64 arm64 3.10.1-1 [332 kB] Fetched 332 kB in 0s (17.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu4pk8shf/libhogweed6t64_3.10.1-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libxext6 arm64 2:1.3.4-1+b3 [49.2 kB] Fetched 49.2 kB in 0s (2862 kB/s) dpkg-name: info: moved 'libxext6_2%3a1.3.4-1+b3_arm64.deb' to '/srv/rebuilderd/tmp/tmp2bkiotbs/libxext6_1.3.4-1+b3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libssl-dev arm64 3.5.0-1 [3383 kB] Fetched 3383 kB in 0s (79.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_6gpzc4b/libssl-dev_3.5.0-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 bsdextrautils arm64 2.41-4 [93.9 kB] Fetched 93.9 kB in 0s (5379 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzljqct5e/bsdextrautils_2.41-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 librtmp-dev arm64 2.4+20151223.gitfa8646d.1-2+b5 [67.5 kB] Fetched 67.5 kB in 0s (3993 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqpj1a1w9/librtmp-dev_2.4+20151223.gitfa8646d.1-2+b5_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libmagic1t64 arm64 1:5.46-5 [103 kB] Fetched 103 kB in 0s (5701 kB/s) dpkg-name: info: moved 'libmagic1t64_1%3a5.46-5_arm64.deb' to '/srv/rebuilderd/tmp/tmp8_rmma_u/libmagic1t64_5.46-5_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 x11proto-dev all 2024.1-1 [603 kB] Fetched 603 kB in 0s (27.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpormgwg9i/x11proto-dev_2024.1-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libxss-dev arm64 1:1.2.3-1+b3 [22.8 kB] Fetched 22.8 kB in 0s (502 kB/s) dpkg-name: info: moved 'libxss-dev_1%3a1.2.3-1+b3_arm64.deb' to '/srv/rebuilderd/tmp/tmpsw3ix628/libxss-dev_1.2.3-1+b3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libxfixes3 arm64 1:6.0.0-2+b4 [20.5 kB] Fetched 20.5 kB in 0s (1208 kB/s) dpkg-name: info: moved 'libxfixes3_1%3a6.0.0-2+b4_arm64.deb' to '/srv/rebuilderd/tmp/tmpd_xqpilt/libxfixes3_6.0.0-2+b4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libgcc-14-dev arm64 14.2.0-19 [2359 kB] Fetched 2359 kB in 0s (64.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps_pn4qa6/libgcc-14-dev_14.2.0-19_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libdatrie1 arm64 0.2.13-3+b1 [37.6 kB] Fetched 37.6 kB in 0s (2211 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx13cu0mj/libdatrie1_0.2.13-3+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 fontconfig arm64 2.15.0-2.3 [463 kB] Fetched 463 kB in 0s (23.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpss8y89c_/fontconfig_2.15.0-2.3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 gir1.2-harfbuzz-0.0 arm64 10.2.0-1+b1 [42.3 kB] Fetched 42.3 kB in 0s (2391 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4k4t78so/gir1.2-harfbuzz-0.0_10.2.0-1+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 sysvinit-utils arm64 3.14-4 [34.0 kB] Fetched 34.0 kB in 0s (2619 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpamsfzabc/sysvinit-utils_3.14-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 liblsan0 arm64 14.2.0-19 [1161 kB] Fetched 1161 kB in 0s (44.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzr1a0on6/liblsan0_14.2.0-19_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg1-9 [20.1 kB] Fetched 20.1 kB in 0s (1242 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2sz593_1/libsasl2-modules-db_2.1.28+dfsg1-9_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libxml-sax-base-perl all 1.09-3 [20.6 kB] Fetched 20.6 kB in 0s (1264 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz3hcygws/libxml-sax-base-perl_1.09-3_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 grep arm64 3.11-4+b1 [426 kB] Fetched 426 kB in 0s (21.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6_nyypot/grep_3.11-4+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libpixman-1-0 arm64 0.44.0-3 [168 kB] Fetched 168 kB in 0s (8971 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpe_ibobnc/libpixman-1-0_0.44.0-3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 g++-14-aarch64-linux-gnu arm64 14.2.0-19 [10.1 MB] Fetched 10.1 MB in 0s (112 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3vagq43b/g++-14-aarch64-linux-gnu_14.2.0-19_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libxcursor1 arm64 1:1.2.3-1 [39.3 kB] Fetched 39.3 kB in 0s (2221 kB/s) dpkg-name: info: moved 'libxcursor1_1%3a1.2.3-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpq6e61jzf/libxcursor1_1.2.3-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 systemd arm64 257.5-2 [2920 kB] Fetched 2920 kB in 0s (54.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpep_jp44l/systemd_257.5-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 binutils arm64 2.44-3 [262 kB] Fetched 262 kB in 0s (14.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnwefsf24/binutils_2.44-3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libgomp1 arm64 14.2.0-19 [124 kB] Fetched 124 kB in 0s (7048 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy3v8uknt/libgomp1_14.2.0-19_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libdrm-amdgpu1 arm64 2.4.124-2 [21.8 kB] Fetched 21.8 kB in 0s (1276 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkgdyz4zw/libdrm-amdgpu1_2.4.124-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libapache-pom-java all 33-2 [5852 B] Fetched 5852 B in 0s (390 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqkpa3aj6/libapache-pom-java_33-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libdbus-1-3 arm64 1.16.2-2 [169 kB] Fetched 169 kB in 0s (9487 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp40ndmqdu/libdbus-1-3_1.16.2-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libdrm2 arm64 2.4.124-2 [38.3 kB] Fetched 38.3 kB in 0s (2290 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6zrz_x8n/libdrm2_2.4.124-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libkeyutils1 arm64 1.6.3-6 [9716 B] Fetched 9716 B in 0s (582 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4tmfasm4/libkeyutils1_1.6.3-6_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libkdb5-10t64 arm64 1.21.3-5 [41.3 kB] Fetched 41.3 kB in 0s (2384 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpscjm6c98/libkdb5-10t64_1.21.3-5_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libxdmcp6 arm64 1:1.1.5-1 [27.8 kB] Fetched 27.8 kB in 0s (1656 kB/s) dpkg-name: info: moved 'libxdmcp6_1%3a1.1.5-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpath8ctxy/libxdmcp6_1.1.5-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 ncurses-bin arm64 6.5+20250216-2 [432 kB] Fetched 432 kB in 0s (21.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoz0x_sqy/ncurses-bin_6.5+20250216-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libglib2.0-dev arm64 2.84.1-2 [53.7 kB] Fetched 53.7 kB in 0s (3146 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpq6dihoky/libglib2.0-dev_2.84.1-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Fetched 15.1 kB in 0s (919 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_neb8uki/libxml-namespacesupport-perl_1.12-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libgfortran-14-dev arm64 14.2.0-19 [418 kB] Fetched 418 kB in 0s (20.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgvegue0u/libgfortran-14-dev_14.2.0-19_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libxaw7 arm64 2:1.0.16-1 [195 kB] Fetched 195 kB in 0s (10.7 MB/s) dpkg-name: info: moved 'libxaw7_2%3a1.0.16-1_arm64.deb' to '/srv/rebuilderd/tmp/tmplu4pg5u1/libxaw7_1.0.16-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libpython3.13-stdlib arm64 3.13.3-2 [1890 kB] Fetched 1890 kB in 0s (59.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7fr6apyx/libpython3.13-stdlib_3.13.3-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 dbus-bin arm64 1.16.2-2 [78.8 kB] Fetched 78.8 kB in 0s (4527 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbry2lxg3/dbus-bin_1.16.2-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libssl3t64 arm64 3.5.0-1 [2747 kB] Fetched 2747 kB in 0s (87.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnjc3_btz/libssl3t64_3.5.0-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Fetched 104 kB in 0s (5017 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdn5_2yed/libarchive-zip-perl_1.68-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libseccomp2 arm64 2.6.0-2 [51.0 kB] Fetched 51.0 kB in 0s (3052 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp14oa4p3k/libseccomp2_2.6.0-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libjansson4 arm64 2.14-2+b3 [39.2 kB] Fetched 39.2 kB in 0s (2341 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7xvdqpp1/libjansson4_2.14-2+b3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libtool all 2.5.4-4 [539 kB] Fetched 539 kB in 0s (26.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvez41t2p/libtool_2.5.4-4_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 fonts-lmodern all 2.005-1 [4540 kB] Fetched 4540 kB in 0s (87.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0a4r2k3u/fonts-lmodern_2.005-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 zlib1g arm64 1:1.3.dfsg+really1.3.1-1+b1 [85.1 kB] Fetched 85.1 kB in 0s (6729 kB/s) dpkg-name: info: moved 'zlib1g_1%3a1.3.dfsg+really1.3.1-1+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmpukbah301/zlib1g_1.3.dfsg+really1.3.1-1+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libxau-dev arm64 1:1.0.11-1 [23.9 kB] Fetched 23.9 kB in 0s (1427 kB/s) dpkg-name: info: moved 'libxau-dev_1%3a1.0.11-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpo75k_rim/libxau-dev_1.0.11-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libkrb5-dev arm64 1.21.3-5 [16.1 kB] Fetched 16.1 kB in 0s (962 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgj93ia_8/libkrb5-dev_1.21.3-5_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libcap2 arm64 1:2.75-7 [27.5 kB] Fetched 27.5 kB in 0s (1653 kB/s) dpkg-name: info: moved 'libcap2_1%3a2.75-7_arm64.deb' to '/srv/rebuilderd/tmp/tmpbpkk8809/libcap2_2.75-7_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 gcc-14 arm64 14.2.0-19 [529 kB] Fetched 529 kB in 0s (24.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5dmpe5gz/gcc-14_14.2.0-19_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 systemd-sysv arm64 257.5-2 [63.9 kB] Fetched 63.9 kB in 0s (3756 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqvfv_be7/systemd-sysv_257.5-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 texinfo all 7.1.1-1 [1753 kB] Fetched 1753 kB in 0s (57.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1l47rz8d/texinfo_7.1.1-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libelf1t64 arm64 0.192-4 [189 kB] Fetched 189 kB in 0s (10.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp60haoysp/libelf1t64_0.192-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 comerr-dev arm64 2.1-1.47.2-1+b1 [56.2 kB] Fetched 56.2 kB in 0s (3331 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc6ff299r/comerr-dev_2.1-1.47.2-1+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libpam-modules-bin arm64 1.7.0-3 [48.0 kB] Fetched 48.0 kB in 0s (2775 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppzbulbsk/libpam-modules-bin_1.7.0-3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libkadm5srv-mit12 arm64 1.21.3-5 [53.0 kB] Fetched 53.0 kB in 0s (3112 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpi9xy0w_p/libkadm5srv-mit12_1.21.3-5_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 tex-common all 6.19 [29.4 kB] Fetched 29.4 kB in 0s (1771 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3c68aqjr/tex-common_6.19_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libgnutls30t64 arm64 3.8.9-2 [1374 kB] Fetched 1374 kB in 0s (49.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2dw2g__a/libgnutls30t64_3.8.9-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 rpcsvc-proto arm64 1.4.3-1+b1 [60.5 kB] Fetched 60.5 kB in 0s (3547 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppqdpsqo3/rpcsvc-proto_1.4.3-1+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libepoxy0 arm64 1.5.10-2 [200 kB] Fetched 200 kB in 0s (10.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpknq65ary/libepoxy0_1.5.10-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 openssl arm64 3.5.0-1 [1454 kB] Fetched 1454 kB in 0s (50.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpasw2zjah/openssl_3.5.0-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 autopoint all 0.23.1-2 [770 kB] Fetched 770 kB in 0s (34.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpax5puwcp/autopoint_0.23.1-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libcommons-logging-java all 1.3.0-1 [68.6 kB] Fetched 68.6 kB in 0s (4096 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdwfgtn7p/libcommons-logging-java_1.3.0-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 default-jre-headless arm64 2:1.21-76 [3192 B] Fetched 3192 B in 0s (194 kB/s) dpkg-name: info: moved 'default-jre-headless_2%3a1.21-76_arm64.deb' to '/srv/rebuilderd/tmp/tmpjtigoile/default-jre-headless_1.21-76_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libtasn1-6 arm64 4.20.0-2 [47.3 kB] Fetched 47.3 kB in 0s (3285 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6juxaqt_/libtasn1-6_4.20.0-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libpsl-dev arm64 0.21.2-1.1+b1 [77.9 kB] Fetched 77.9 kB in 0s (4511 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuwm2amd7/libpsl-dev_0.21.2-1.1+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libreadline-dev arm64 8.2-6 [155 kB] Fetched 155 kB in 0s (8413 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl4zhn2kt/libreadline-dev_8.2-6_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 liblastlog2-2 arm64 2.41-4 [28.3 kB] Fetched 28.3 kB in 0s (1701 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxvywuqhe/liblastlog2-2_2.41-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 linux-libc-dev all 6.12.25-1 [2565 kB] Fetched 2565 kB in 0s (67.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjujzflcc/linux-libc-dev_6.12.25-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 util-linux arm64 2.41-4 [1191 kB] Fetched 1191 kB in 0s (44.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvjj1rzuo/util-linux_2.41-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libgl1-mesa-dri arm64 25.0.4-1 [45.3 kB] Fetched 45.3 kB in 0s (2638 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_4qq97b2/libgl1-mesa-dri_25.0.4-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libgif7 arm64 5.2.2-1+b1 [44.2 kB] Fetched 44.2 kB in 0s (2781 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzmas8w8o/libgif7_5.2.2-1+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libavahi-common3 arm64 0.8-16 [43.3 kB] Fetched 43.3 kB in 0s (2535 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp23pbd733/libavahi-common3_0.8-16_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 media-types all 13.0.0 [29.3 kB] Fetched 29.3 kB in 0s (1682 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfocj6jit/media-types_13.0.0_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libpangocairo-1.0-0 arm64 1.56.3-1 [33.7 kB] Fetched 33.7 kB in 0s (2029 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9z4eawtz/libpangocairo-1.0-0_1.56.3-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libuchardet0 arm64 0.0.8-1+b2 [69.2 kB] Fetched 69.2 kB in 0s (3957 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvxmigera/libuchardet0_0.0.8-1+b2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libgio-2.0-dev-bin arm64 2.84.1-2 [163 kB] Fetched 163 kB in 0s (9580 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2o2vswvc/libgio-2.0-dev-bin_2.84.1-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libtasn1-6-dev arm64 4.20.0-2 [96.7 kB] Fetched 96.7 kB in 0s (5654 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqjske0dd/libtasn1-6-dev_4.20.0-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libmount1 arm64 2.41-4 [199 kB] Fetched 199 kB in 0s (10.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr2mgyvwu/libmount1_2.41-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libunistring5 arm64 1.3-2 [453 kB] Fetched 453 kB in 0s (22.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprqotdxn_/libunistring5_1.3-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 man-db arm64 2.13.0-1 [1404 kB] Fetched 1404 kB in 0s (49.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8kujb_54/man-db_2.13.0-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libice6 arm64 2:1.1.1-1 [62.1 kB] Fetched 62.1 kB in 0s (3688 kB/s) dpkg-name: info: moved 'libice6_2%3a1.1.1-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpfgt8d4rh/libice6_1.1.1-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 xtrans-dev all 1.4.0-1 [98.7 kB] Fetched 98.7 kB in 0s (5643 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpper_4_7i/xtrans-dev_1.4.0-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libcairo-gobject2 arm64 1.18.4-1+b1 [130 kB] Fetched 130 kB in 0s (7269 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvehr_pxt/libcairo-gobject2_1.18.4-1+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libpangoxft-1.0-0 arm64 1.56.3-1 [27.1 kB] Fetched 27.1 kB in 0s (1643 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqjzr3cwk/libpangoxft-1.0-0_1.56.3-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libubsan1 arm64 14.2.0-19 [1039 kB] Fetched 1039 kB in 0s (41.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpggul6lxc/libubsan1_14.2.0-19_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libc6 arm64 2.41-7 [2483 kB] Fetched 2483 kB in 0s (150 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsntwmpw3/libc6_2.41-7_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libfontbox-java all 1:1.8.16-5 [211 kB] Fetched 211 kB in 0s (11.5 MB/s) dpkg-name: info: moved 'libfontbox-java_1%3a1.8.16-5_all.deb' to '/srv/rebuilderd/tmp/tmpvjd9a685/libfontbox-java_1.8.16-5_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 uuid-dev arm64 2.41-4 [49.5 kB] Fetched 49.5 kB in 0s (3005 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt7qf0dvc/uuid-dev_2.41-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libxcb-render0 arm64 1.17.0-2+b1 [115 kB] Fetched 115 kB in 0s (6435 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprm0rn185/libxcb-render0_1.17.0-2+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libzstd1 arm64 1.5.7+dfsg-1 [266 kB] Fetched 266 kB in 0s (13.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2w0c0yyq/libzstd1_1.5.7+dfsg-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libpdfbox-java all 1:1.8.16-5 [5527 kB] Fetched 5527 kB in 0s (89.4 MB/s) dpkg-name: info: moved 'libpdfbox-java_1%3a1.8.16-5_all.deb' to '/srv/rebuilderd/tmp/tmph7r0a_iu/libpdfbox-java_1.8.16-5_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 nettle-dev arm64 3.10.1-1 [1325 kB] Fetched 1325 kB in 0s (48.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp4vednnz/nettle-dev_3.10.1-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libstdc++6 arm64 14.2.0-19 [638 kB] Fetched 638 kB in 0s (32.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpg7erag47/libstdc++6_14.2.0-19_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libxrandr2 arm64 2:1.5.4-1+b3 [35.9 kB] Fetched 35.9 kB in 0s (2062 kB/s) dpkg-name: info: moved 'libxrandr2_2%3a1.5.4-1+b3_arm64.deb' to '/srv/rebuilderd/tmp/tmp4d__2bqo/libxrandr2_1.5.4-1+b3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 xauth arm64 1:1.1.2-1.1 [35.4 kB] Fetched 35.4 kB in 0s (2192 kB/s) dpkg-name: info: moved 'xauth_1%3a1.1.2-1.1_arm64.deb' to '/srv/rebuilderd/tmp/tmp6qdng29a/xauth_1.1.2-1.1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libwayland-cursor0 arm64 1.23.1-3 [11.7 kB] Fetched 11.7 kB in 0s (903 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2bbnz5sl/libwayland-cursor0_1.23.1-3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libpcre2-32-0 arm64 10.45-1 [237 kB] Fetched 237 kB in 0s (13.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv3jh3nk9/libpcre2-32-0_10.45-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 file arm64 1:5.46-5 [43.7 kB] Fetched 43.7 kB in 0s (2714 kB/s) dpkg-name: info: moved 'file_1%3a5.46-5_arm64.deb' to '/srv/rebuilderd/tmp/tmpjg9kfhh9/file_5.46-5_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libxml-sax-perl all 1.02+dfsg-4 [53.4 kB] Fetched 53.4 kB in 0s (2998 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0jdiqapf/libxml-sax-perl_1.02+dfsg-4_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libxmu6 arm64 2:1.1.3-3+b4 [55.7 kB] Fetched 55.7 kB in 0s (3367 kB/s) dpkg-name: info: moved 'libxmu6_2%3a1.1.3-3+b4_arm64.deb' to '/srv/rebuilderd/tmp/tmpyulaueuu/libxmu6_1.1.3-3+b4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libfile-which-perl all 1.27-2 [15.1 kB] Fetched 15.1 kB in 0s (858 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdog_odsa/libfile-which-perl_1.27-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libllvm19 arm64 1:19.1.7-3 [23.3 MB] Fetched 23.3 MB in 0s (163 MB/s) dpkg-name: info: moved 'libllvm19_1%3a19.1.7-3_arm64.deb' to '/srv/rebuilderd/tmp/tmpn05381cl/libllvm19_19.1.7-3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libselinux1-dev arm64 3.8.1-1 [172 kB] Fetched 172 kB in 0s (9341 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo54983f0/libselinux1-dev_3.8.1-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libcairo-script-interpreter2 arm64 1.18.4-1+b1 [57.4 kB] Fetched 57.4 kB in 0s (2988 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp20q1x_g9/libcairo-script-interpreter2_1.18.4-1+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 java-common all 0.76 [6776 B] Fetched 6776 B in 0s (405 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuztv37bu/java-common_0.76_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libgio-2.0-dev arm64 2.84.1-2 [1705 kB] Fetched 1705 kB in 0s (56.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp1rmewx3/libgio-2.0-dev_2.84.1-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libharfbuzz-gobject0 arm64 10.2.0-1+b1 [32.2 kB] Fetched 32.2 kB in 0s (1671 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvpmr46hg/libharfbuzz-gobject0_10.2.0-1+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 cpp-14-aarch64-linux-gnu arm64 14.2.0-19 [9169 kB] Fetched 9169 kB in 0s (116 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5tbeb1gx/cpp-14-aarch64-linux-gnu_14.2.0-19_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 bzip2 arm64 1.0.8-6 [39.5 kB] Fetched 39.5 kB in 0s (2255 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpypr9gvr0/bzip2_1.0.8-6_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libglx-mesa0 arm64 25.0.4-1 [142 kB] Fetched 142 kB in 0s (8118 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxzfyuqbj/libglx-mesa0_25.0.4-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 texlive-extra-utils all 2024.20250309-2 [67.6 MB] Fetched 67.6 MB in 0s (168 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8jubohlq/texlive-extra-utils_2024.20250309-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 bash arm64 5.2.37-2 [1457 kB] Fetched 1457 kB in 0s (51.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz_nqcfdl/bash_5.2.37-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Fetched 22.9 kB in 0s (1386 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpe5f8akeh/intltool-debian_0.35.0+20060710.6_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 dbus arm64 1.16.2-2 [70.7 kB] Fetched 70.7 kB in 0s (4282 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps52qrhcm/dbus_1.16.2-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Fetched 326 kB in 0s (16.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx1jyruwt/libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libmd0 arm64 1.1.0-2+b1 [33.7 kB] Fetched 33.7 kB in 0s (1830 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpq63y53jv/libmd0_1.1.0-2+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 xfonts-base all 1:1.0.5+nmu1 [5895 kB] Fetched 5895 kB in 0s (84.2 MB/s) dpkg-name: info: moved 'xfonts-base_1%3a1.0.5+nmu1_all.deb' to '/srv/rebuilderd/tmp/tmpy58ba7an/xfonts-base_1.0.5+nmu1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libk5crypto3 arm64 1.21.3-5 [81.2 kB] Fetched 81.2 kB in 0s (4560 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp17s4t6dm/libk5crypto3_1.21.3-5_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libkrb5-3 arm64 1.21.3-5 [308 kB] Fetched 308 kB in 0s (15.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7oqf0o8t/libkrb5-3_1.21.3-5_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 gfortran-14-aarch64-linux-gnu arm64 14.2.0-19 [9794 kB] Fetched 9794 kB in 0s (119 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpf77urlph/gfortran-14-aarch64-linux-gnu_14.2.0-19_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libnghttp2-14 arm64 1.64.0-1.1 [71.4 kB] Fetched 71.4 kB in 0s (4098 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpixyjiv8j/libnghttp2-14_1.64.0-1.1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libteckit0 arm64 2.5.12+ds1-1+b1 [303 kB] Fetched 303 kB in 0s (15.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpev2wyoul/libteckit0_2.5.12+ds1-1+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libacl1 arm64 2.3.2-2+b1 [32.2 kB] Fetched 32.2 kB in 0s (1856 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxhzyymjc/libacl1_2.3.2-2+b1_arm64.deb' Downloading dependency 1 of 521: libglvnd0:arm64=1.7.0-1+b2 Downloading dependency 2 of 521: procps:arm64=2:4.0.4-8 Downloading dependency 3 of 521: libmpfr6:arm64=4.2.2-1 Downloading dependency 4 of 521: libldap2:arm64=2.6.9+dfsg-2 Downloading dependency 5 of 521: xvfb:arm64=2:21.1.16-1 Downloading dependency 6 of 521: fonts-dejavu-mono:arm64=2.37-8 Downloading dependency 7 of 521: libhogweed6t64:arm64=3.10.1-1 Downloading dependency 8 of 521: libxext6:arm64=2:1.3.4-1+b3 Downloading dependency 9 of 521: libssl-dev:arm64=3.5.0-1 Downloading dependency 10 of 521: bsdextrautils:arm64=2.41-4 Downloading dependency 11 of 521: librtmp-dev:arm64=2.4+20151223.gitfa8646d.1-2+b5 Downloading dependency 12 of 521: libmagic1t64:arm64=1:5.46-5 Downloading dependency 13 of 521: x11proto-dev:arm64=2024.1-1 Downloading dependency 14 of 521: libxss-dev:arm64=1:1.2.3-1+b3 Downloading dependency 15 of 521: libxfixes3:arm64=1:6.0.0-2+b4 Downloading dependency 16 of 521: libgcc-14-dev:arm64=14.2.0-19 Downloading dependency 17 of 521: libdatrie1:arm64=0.2.13-3+b1 Downloading dependency 18 of 521: fontconfig:arm64=2.15.0-2.3 Downloading dependency 19 of 521: gir1.2-harfbuzz-0.0:arm64=10.2.0-1+b1 Downloading dependency 20 of 521: sysvinit-utils:arm64=3.14-4 Downloading dependency 21 of 521: liblsan0:arm64=14.2.0-19 Downloading dependency 22 of 521: libsasl2-modules-db:arm64=2.1.28+dfsg1-9 Downloading dependency 23 of 521: libxml-sax-base-perl:arm64=1.09-3 Downloading dependency 24 of 521: grep:arm64=3.11-4+b1 Downloading dependency 25 of 521: libpixman-1-0:arm64=0.44.0-3 Downloading dependency 26 of 521: g++-14-aarch64-linux-gnu:arm64=14.2.0-19 Downloading dependency 27 of 521: libxcursor1:arm64=1:1.2.3-1 Downloading dependency 28 of 521: systemd:arm64=257.5-2 Downloading dependency 29 of 521: binutils:arm64=2.44-3 Downloading dependency 30 of 521: libgomp1:arm64=14.2.0-19 Downloading dependency 31 of 521: libdrm-amdgpu1:arm64=2.4.124-2 Downloading dependency 32 of 521: libapache-pom-java:arm64=33-2 Downloading dependency 33 of 521: libdbus-1-3:arm64=1.16.2-2 Downloading dependency 34 of 521: libdrm2:arm64=2.4.124-2 Downloading dependency 35 of 521: libkeyutils1:arm64=1.6.3-6 Downloading dependency 36 of 521: libkdb5-10t64:arm64=1.21.3-5 Downloading dependency 37 of 521: libxdmcp6:arm64=1:1.1.5-1 Downloading dependency 38 of 521: ncurses-bin:arm64=6.5+20250216-2 Downloading dependency 39 of 521: libglib2.0-dev:arm64=2.84.1-2 Downloading dependency 40 of 521: libxml-namespacesupport-perl:arm64=1.12-2 Downloading dependency 41 of 521: libgfortran-14-dev:arm64=14.2.0-19 Downloading dependency 42 of 521: libxaw7:arm64=2:1.0.16-1 Downloading dependency 43 of 521: libpython3.13-stdlib:arm64=3.13.3-2 Downloading dependency 44 of 521: dbus-bin:arm64=1.16.2-2 Downloading dependency 45 of 521: libssl3t64:arm64=3.5.0-1 Downloading dependency 46 of 521: libarchive-zip-perl:arm64=1.68-1 Downloading dependency 47 of 521: libseccomp2:arm64=2.6.0-2 Downloading dependency 48 of 521: libjansson4:arm64=2.14-2+b3 Downloading dependency 49 of 521: libtool:arm64=2.5.4-4 Downloading dependency 50 of 521: fonts-lmodern:arm64=2.005-1 Downloading dependency 51 of 521: zlib1g:arm64=1:1.3.dfsg+really1.3.1-1+b1 Downloading dependency 52 of 521: libxau-dev:arm64=1:1.0.11-1 Downloading dependency 53 of 521: libkrb5-dev:arm64=1.21.3-5 Downloading dependency 54 of 521: libcap2:arm64=1:2.75-7 Downloading dependency 55 of 521: gcc-14:arm64=14.2.0-19 Downloading dependency 56 of 521: systemd-sysv:arm64=257.5-2 Downloading dependency 57 of 521: texinfo:arm64=7.1.1-1 Downloading dependency 58 of 521: libelf1t64:arm64=0.192-4 Downloading dependency 59 of 521: comerr-dev:arm64=2.1-1.47.2-1+b1 Downloading dependency 60 of 521: libpam-modules-bin:arm64=1.7.0-3 Downloading dependency 61 of 521: libkadm5srv-mit12:arm64=1.21.3-5 Downloading dependency 62 of 521: tex-common:arm64=6.19 Downloading dependency 63 of 521: libgnutls30t64:arm64=3.8.9-2 Downloading dependency 64 of 521: rpcsvc-proto:arm64=1.4.3-1+b1 Downloading dependency 65 of 521: libepoxy0:arm64=1.5.10-2 Downloading dependency 66 of 521: openssl:arm64=3.5.0-1 Downloading dependency 67 of 521: autopoint:arm64=0.23.1-2 Downloading dependency 68 of 521: libcommons-logging-java:arm64=1.3.0-1 Downloading dependency 69 of 521: default-jre-headless:arm64=2:1.21-76 Downloading dependency 70 of 521: libtasn1-6:arm64=4.20.0-2 Downloading dependency 71 of 521: libpsl-dev:arm64=0.21.2-1.1+b1 Downloading dependency 72 of 521: libreadline-dev:arm64=8.2-6 Downloading dependency 73 of 521: liblastlog2-2:arm64=2.41-4 Downloading dependency 74 of 521: linux-libc-dev:arm64=6.12.25-1 Downloading dependency 75 of 521: util-linux:arm64=2.41-4 Downloading dependency 76 of 521: libgl1-mesa-dri:arm64=25.0.4-1 Downloading dependency 77 of 521: libgif7:arm64=5.2.2-1+b1 Downloading dependency 78 of 521: libavahi-common3:arm64=0.8-16 Downloading dependency 79 of 521: media-types:arm64=13.0.0 Downloading dependency 80 of 521: libpangocairo-1.0-0:arm64=1.56.3-1 Downloading dependency 81 of 521: libuchardet0:arm64=0.0.8-1+b2 Downloading dependency 82 of 521: libgio-2.0-dev-bin:arm64=2.84.1-2 Downloading dependency 83 of 521: libtasn1-6-dev:arm64=4.20.0-2 Downloading dependency 84 of 521: libmount1:arm64=2.41-4 Downloading dependency 85 of 521: libunistring5:arm64=1.3-2 Downloading dependency 86 of 521: man-db:arm64=2.13.0-1 Downloading dependency 87 of 521: libice6:arm64=2:1.1.1-1 Downloading dependency 88 of 521: xtrans-dev:arm64=1.4.0-1 Downloading dependency 89 of 521: libcairo-gobject2:arm64=1.18.4-1+b1 Downloading dependency 90 of 521: libpangoxft-1.0-0:arm64=1.56.3-1 Downloading dependency 91 of 521: libubsan1:arm64=14.2.0-19 Downloading dependency 92 of 521: libc6:arm64=2.41-7 Downloading dependency 93 of 521: libfontbox-java:arm64=1:1.8.16-5 Downloading dependency 94 of 521: uuid-dev:arm64=2.41-4 Downloading dependency 95 of 521: libxcb-render0:arm64=1.17.0-2+b1 Downloading dependency 96 of 521: libzstd1:arm64=1.5.7+dfsg-1 Downloading dependency 97 of 521: libpdfbox-java:arm64=1:1.8.16-5 Downloading dependency 98 of 521: nettle-dev:arm64=3.10.1-1 Downloading dependency 99 of 521: libstdc++6:arm64=14.2.0-19 Downloading dependency 100 of 521: libxrandr2:arm64=2:1.5.4-1+b3 Downloading dependency 101 of 521: xauth:arm64=1:1.1.2-1.1 Downloading dependency 102 of 521: libwayland-cursor0:arm64=1.23.1-3 Downloading dependency 103 of 521: libpcre2-32-0:arm64=10.45-1 Downloading dependency 104 of 521: file:arm64=1:5.46-5 Downloading dependency 105 of 521: libxml-sax-perl:arm64=1.02+dfsg-4 Downloading dependency 106 of 521: libxmu6:arm64=2:1.1.3-3+b4 Downloading dependency 107 of 521: libfile-which-perl:arm64=1.27-2 Downloading dependency 108 of 521: libllvm19:arm64=1:19.1.7-3 Downloading dependency 109 of 521: libselinux1-dev:arm64=3.8.1-1 Downloading dependency 110 of 521: libcairo-script-interpreter2:arm64=1.18.4-1+b1 Downloading dependency 111 of 521: java-common:arm64=0.76 Downloading dependency 112 of 521: libgio-2.0-dev:arm64=2.84.1-2 Downloading dependency 113 of 521: libharfbuzz-gobject0:arm64=10.2.0-1+b1 Downloading dependency 114 of 521: cpp-14-aarch64-linux-gnu:arm64=14.2.0-19 Downloading dependency 115 of 521: bzip2:arm64=1.0.8-6 Downloading dependency 116 of 521: libglx-mesa0:arm64=25.0.4-1 Downloading dependency 117 of 521: texlive-extra-utils:arm64=2024.20250309-2 Downloading dependency 118 of 521: bash:arm64=5.2.37-2 Downloading dependency 119 of 521: intltool-debian:arm64=0.35.0+20060710.6 Downloading dependency 120 of 521: dbus:arm64=1.16.2-2 Downloading dependency 121 of 521: libjs-jquery:arm64=3.6.1+dfsg+~3.5.14-1 Downloading dependency 122 of 521: libmd0:arm64=1.1.0-2+b1 Downloading dependency 123 of 521: xfonts-base:arm64=1:1.0.5+nmu1 Downloading dependency 124 of 521: libk5crypto3:arm64=1.21.3-5 Downloading dependency 125 of 521: libkrb5-3:arm64=1.21.3-5 Downloading dependency 126 of 521: gfortran-14-aarch64-linux-gnu:arm64=14.2.0-19 Downloading dependency 127 of 521: libnghttp2-14:arm64=1.64.0-1.1 Downloading dependency 128 of 521: libteckit0:arm64=2.5.12+ds1-1+b1 Downloading dependency 129 of 521: libacl1:arm64=2.3.2-2+b1 Downloading dependency 130 of 521: perl-modules-5.40:arm64=5.40.1-3Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 perl-modules-5.40 all 5.40.1-3 [3021 kB] Fetched 3021 kB in 0s (125 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdv_rdbgm/perl-modules-5.40_5.40.1-3_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libxcb1 arm64 1.17.0-2+b1 [143 kB] Fetched 143 kB in 0s (7734 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9ck0urzy/libxcb1_1.17.0-2+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 native-architecture all 0.2.6 [2264 B] Fetched 2264 B in 0s (129 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzpmtft92/native-architecture_0.2.6_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 fontconfig-config arm64 2.15.0-2.3 [318 kB] Fetched 318 kB in 0s (16.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxxb8lq4e/fontconfig-config_2.15.0-2.3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libpaper2 arm64 2.2.5-0.3+b2 [16.6 kB] Fetched 16.6 kB in 0s (1028 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5sxuceed/libpaper2_2.2.5-0.3+b2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libpam-modules arm64 1.7.0-3 [170 kB] Fetched 170 kB in 0s (9116 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7dpy8wpb/libpam-modules_1.7.0-3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libcloudproviders0 arm64 0.3.6-2 [27.4 kB] Fetched 27.4 kB in 0s (1826 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt8u6_011/libcloudproviders0_0.3.6-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libnss3 arm64 2:3.110-1 [1292 kB] Fetched 1292 kB in 0s (46.6 MB/s) dpkg-name: info: moved 'libnss3_2%3a3.110-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpmpah8u6c/libnss3_3.110-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libpcre2-16-0 arm64 10.45-1 [247 kB] Fetched 247 kB in 0s (13.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt_k_x9vs/libpcre2-16-0_10.45-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 ncurses-base all 6.5+20250216-2 [273 kB] Fetched 273 kB in 0s (13.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjukvxygt/ncurses-base_6.5+20250216-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 xserver-common all 2:21.1.16-1 [2409 kB] Fetched 2409 kB in 0s (65.8 MB/s) dpkg-name: info: moved 'xserver-common_2%3a21.1.16-1_all.deb' to '/srv/rebuilderd/tmp/tmps7lpdigg/xserver-common_21.1.16-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 gcc-14-aarch64-linux-gnu arm64 14.2.0-19 [17.7 MB] Fetched 17.7 MB in 0s (117 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv0ixiykf/gcc-14-aarch64-linux-gnu_14.2.0-19_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libharfbuzz-cairo0 arm64 10.2.0-1+b1 [42.5 kB] Fetched 42.5 kB in 0s (2400 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu_rtq_fe/libharfbuzz-cairo0_10.2.0-1+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libpango-1.0-0 arm64 1.56.3-1 [213 kB] Fetched 213 kB in 0s (11.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpofd0ak29/libpango-1.0-0_1.56.3-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libpotrace0 arm64 1.16-2+b2 [23.4 kB] Fetched 23.4 kB in 0s (1432 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9dogepbq/libpotrace0_1.16-2+b2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 init-system-helpers all 1.68 [38.7 kB] Fetched 38.7 kB in 0s (2012 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvz_46qyt/init-system-helpers_1.68_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 python3 arm64 3.13.3-1 [28.2 kB] Fetched 28.2 kB in 0s (2578 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp43bxsewu/python3_3.13.3-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 dbus-daemon arm64 1.16.2-2 [152 kB] Fetched 152 kB in 0s (8348 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_0s18hg8/dbus-daemon_1.16.2-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libcrypt-dev arm64 1:4.4.38-1 [123 kB] Fetched 123 kB in 0s (7207 kB/s) dpkg-name: info: moved 'libcrypt-dev_1%3a4.4.38-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpuzv4bgwx/libcrypt-dev_4.4.38-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libsensors5 arm64 1:3.6.2-2 [36.4 kB] Fetched 36.4 kB in 0s (715 kB/s) dpkg-name: info: moved 'libsensors5_1%3a3.6.2-2_arm64.deb' to '/srv/rebuilderd/tmp/tmp5z7yo6lc/libsensors5_3.6.2-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libuuid1 arm64 2.41-4 [37.4 kB] Fetched 37.4 kB in 0s (2156 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyk0cceez/libuuid1_2.41-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libnghttp3-dev arm64 1.8.0-1 [89.4 kB] Fetched 89.4 kB in 0s (5923 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpa_57ho2j/libnghttp3-dev_1.8.0-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libatk1.0-0t64 arm64 2.56.2-1 [50.1 kB] Fetched 50.1 kB in 0s (2979 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1f20qb0b/libatk1.0-0t64_2.56.2-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libgnutls-dane0t64 arm64 3.8.9-2 [452 kB] Fetched 452 kB in 0s (21.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpten6h_xs/libgnutls-dane0t64_3.8.9-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libxss1 arm64 1:1.2.3-1+b3 [17.1 kB] Fetched 17.1 kB in 0s (1001 kB/s) dpkg-name: info: moved 'libxss1_1%3a1.2.3-1+b3_arm64.deb' to '/srv/rebuilderd/tmp/tmp_m406hvd/libxss1_1.2.3-1+b3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 gfortran-aarch64-linux-gnu arm64 4:14.2.0-1 [1284 B] Fetched 1284 B in 0s (71.1 kB/s) dpkg-name: info: moved 'gfortran-aarch64-linux-gnu_4%3a14.2.0-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpbq3o7fvt/gfortran-aarch64-linux-gnu_14.2.0-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libavahi-common-data arm64 0.8-16 [112 kB] Fetched 112 kB in 0s (6503 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd3l83ib1/libavahi-common-data_0.8-16_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libpango1.0-dev arm64 1.56.3-1 [156 kB] Fetched 156 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkewgplf2/libpango1.0-dev_1.56.3-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 openssl-provider-legacy arm64 3.5.0-1 [304 kB] Fetched 304 kB in 0s (15.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj9kfom1_/openssl-provider-legacy_3.5.0-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 g++-14 arm64 14.2.0-19 [22.5 kB] Fetched 22.5 kB in 0s (1293 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpub7mea8z/g++-14_14.2.0-19_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 gir1.2-pango-1.0 arm64 1.56.3-1 [39.1 kB] Fetched 39.1 kB in 0s (2247 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwtjziw6l/gir1.2-pango-1.0_1.56.3-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 cpp-14 arm64 14.2.0-19 [1276 B] Fetched 1276 B in 0s (78.1 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprz_c6e9_/cpp-14_14.2.0-19_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libsystemd0 arm64 257.5-2 [421 kB] Fetched 421 kB in 0s (19.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3qlt_edp/libsystemd0_257.5-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 dpkg-dev all 1.22.18 [1338 kB] Fetched 1338 kB in 0s (49.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpidfj73ne/dpkg-dev_1.22.18_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libgraphite2-3 arm64 1.3.14-2+b1 [70.4 kB] Fetched 70.4 kB in 0s (4061 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp12mzsarf/libgraphite2-3_1.3.14-2+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 dconf-service arm64 0.40.0-5 [30.9 kB] Fetched 30.9 kB in 0s (1806 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3zbpx787/dconf-service_0.40.0-5_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 icu-devtools arm64 76.1-3 [200 kB] Fetched 200 kB in 0s (10.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy5a_ajw1/icu-devtools_76.1-3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 gir1.2-freedesktop arm64 1.84.0-1 [60.5 kB] Fetched 60.5 kB in 0s (3661 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc_efy5pc/gir1.2-freedesktop_1.84.0-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB] Fetched 22.1 kB in 0s (1327 kB/s) dpkg-name: info: moved 'xorg-sgml-doctools_1%3a1.11-1.1_all.deb' to '/srv/rebuilderd/tmp/tmpp3d4vlq1/xorg-sgml-doctools_1.11-1.1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 openjdk-21-jre arm64 21.0.7+6-1 [193 kB] Fetched 193 kB in 0s (10.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6dh4t2pl/openjdk-21-jre_21.0.7+6-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libldap-dev arm64 2.6.9+dfsg-2 [305 kB] Fetched 305 kB in 0s (16.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgofrso83/libldap-dev_2.6.9+dfsg-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 make arm64 4.4.1-2 [452 kB] Fetched 452 kB in 0s (18.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwnkpimu9/make_4.4.1-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libglib2.0-data all 2.84.1-2 [1284 kB] Fetched 1284 kB in 0s (46.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx107k5nq/libglib2.0-data_2.84.1-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libfontconfig-dev arm64 2.15.0-2.3 [412 kB] Fetched 412 kB in 0s (20.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps4dcc3h3/libfontconfig-dev_2.15.0-2.3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libunicode-linebreak-perl arm64 0.0.20190101-1+b8 [93.5 kB] Fetched 93.5 kB in 0s (5141 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr3rwdv1t/libunicode-linebreak-perl_0.0.20190101-1+b8_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libbz2-dev arm64 1.0.8-6 [31.9 kB] Fetched 31.9 kB in 0s (1918 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo0hk1dr3/libbz2-dev_1.0.8-6_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libbrotli-dev arm64 1.1.0-2+b7 [308 kB] Fetched 308 kB in 0s (16.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpasa1n227/libbrotli-dev_1.1.0-2+b7_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 sed arm64 4.9-2+b1 [326 kB] Fetched 326 kB in 0s (16.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmsy2ah3u/sed_4.9-2+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 at-spi2-common all 2.56.2-1 [171 kB] Fetched 171 kB in 0s (8570 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfp97im9h/at-spi2-common_2.56.2-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 mesa-libgallium arm64 25.0.4-1 [8031 kB] Fetched 8031 kB in 0s (64.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp22p3fm12/mesa-libgallium_25.0.4-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libsasl2-2 arm64 2.1.28+dfsg1-9 [55.6 kB] Fetched 55.6 kB in 0s (3711 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0a2u3n7u/libsasl2-2_2.1.28+dfsg1-9_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 tk8.6 arm64 8.6.16-1 [69.7 kB] Fetched 69.7 kB in 0s (4174 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6iy8lwxt/tk8.6_8.6.16-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 base-files arm64 13.7 [72.9 kB] Fetched 72.9 kB in 0s (4358 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphvzo2xz7/base-files_13.7_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 tk8.6-dev arm64 8.6.16-1 [763 kB] Fetched 763 kB in 0s (34.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxfj89dfk/tk8.6-dev_8.6.16-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 automake all 1:1.17-4 [862 kB] Fetched 862 kB in 0s (36.9 MB/s) dpkg-name: info: moved 'automake_1%3a1.17-4_all.deb' to '/srv/rebuilderd/tmp/tmpyvpv6nh9/automake_1.17-4_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 dh-strip-nondeterminism all 1.14.1-2 [8620 B] Fetched 8620 B in 0s (537 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbx80l8dn/dh-strip-nondeterminism_1.14.1-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libcairo2-dev arm64 1.18.4-1+b1 [43.4 kB] Fetched 43.4 kB in 0s (2455 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpefwo7yrm/libcairo2-dev_1.18.4-1+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libjpeg-dev arm64 1:2.1.5-3.1 [72.0 kB] Fetched 72.0 kB in 0s (4141 kB/s) dpkg-name: info: moved 'libjpeg-dev_1%3a2.1.5-3.1_arm64.deb' to '/srv/rebuilderd/tmp/tmp96rxx2rs/libjpeg-dev_2.1.5-3.1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 xz-utils arm64 5.8.1-1 [657 kB] Fetched 657 kB in 0s (30.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpetzrr_x0/xz-utils_5.8.1-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libjpeg62-turbo-dev arm64 1:2.1.5-3.1 [293 kB] Fetched 293 kB in 0s (15.1 MB/s) dpkg-name: info: moved 'libjpeg62-turbo-dev_1%3a2.1.5-3.1_arm64.deb' to '/srv/rebuilderd/tmp/tmpq9_z2jj5/libjpeg62-turbo-dev_2.1.5-3.1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libxcb1-dev arm64 1.17.0-2+b1 [182 kB] Fetched 182 kB in 0s (9657 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpebsij6_n/libxcb1-dev_1.17.0-2+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libc-bin arm64 2.41-7 [550 kB] Fetched 550 kB in 0s (26.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn8e8bst7/libc-bin_2.41-7_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libssh2-1-dev arm64 1.11.1-1 [388 kB] Fetched 388 kB in 0s (18.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_nger5g7/libssh2-1-dev_1.11.1-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 krb5-multidev arm64 1.21.3-5 [126 kB] Fetched 126 kB in 0s (7095 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmparjuwq0c/krb5-multidev_1.21.3-5_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libc6-dev arm64 2.41-7 [1621 kB] Fetched 1621 kB in 0s (50.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpi0oi7fdt/libc6-dev_2.41-7_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 gtk-update-icon-cache arm64 4.18.4+ds-2 [51.3 kB] Fetched 51.3 kB in 0s (2987 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpe5wgy16b/gtk-update-icon-cache_4.18.4+ds-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libncurses-dev arm64 6.5+20250216-2 [340 kB] Fetched 340 kB in 0s (17.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpem2un_6_/libncurses-dev_6.5+20250216-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libsysprof-capture-4-dev arm64 48.0-2 [49.6 kB] Fetched 49.6 kB in 0s (2853 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnxenz83c/libsysprof-capture-4-dev_48.0-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libgirepository-2.0-0 arm64 2.84.1-2 [132 kB] Fetched 132 kB in 0s (7630 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_frshcen/libgirepository-2.0-0_2.84.1-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libcom-err2 arm64 1.47.2-1+b1 [24.2 kB] Fetched 24.2 kB in 0s (1509 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjrmep1t3/libcom-err2_1.47.2-1+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 gcc-aarch64-linux-gnu arm64 4:14.2.0-1 [1440 B] Fetched 1440 B in 0s (87.0 kB/s) dpkg-name: info: moved 'gcc-aarch64-linux-gnu_4%3a14.2.0-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpo4u2zqb1/gcc-aarch64-linux-gnu_14.2.0-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libdeflate0 arm64 1.23-2 [42.4 kB] Fetched 42.4 kB in 0s (2564 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwt_tc3u1/libdeflate0_1.23-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libpng16-16t64 arm64 1.6.47-1.1 [274 kB] Fetched 274 kB in 0s (14.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn7tv8awd/libpng16-16t64_1.6.47-1.1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libgtk-3-common all 3.24.49-3 [4908 kB] Fetched 4908 kB in 0s (185 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwyjxjp7p/libgtk-3-common_3.24.49-3_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libharfbuzz0b arm64 10.2.0-1+b1 [442 kB] Fetched 442 kB in 0s (21.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp417zawzs/libharfbuzz0b_10.2.0-1+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libsepol-dev arm64 3.8.1-1 [356 kB] Fetched 356 kB in 0s (14.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmplegkvw/libsepol-dev_3.8.1-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libz3-4 arm64 4.13.3-1 [7507 kB] Fetched 7507 kB in 0s (105 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv9syd_ni/libz3-4_4.13.3-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 bsdutils arm64 1:2.41-4 [109 kB] Fetched 109 kB in 0s (6184 kB/s) dpkg-name: info: moved 'bsdutils_1%3a2.41-4_arm64.deb' to '/srv/rebuilderd/tmp/tmph0shn5j3/bsdutils_2.41-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libglib2.0-dev-bin arm64 2.84.1-2 [53.0 kB] Fetched 53.0 kB in 0s (2846 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpk_raybpk/libglib2.0-dev-bin_2.84.1-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libunbound8 arm64 1.22.0-1+b1 [553 kB] Fetched 553 kB in 0s (26.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt2fuhxwd/libunbound8_1.22.0-1+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libtirpc-dev arm64 1.3.6+ds-1 [192 kB] Fetched 192 kB in 0s (10.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_0itpdwb/libtirpc-dev_1.3.6+ds-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libxml-libxml-perl arm64 2.0207+dfsg+really+2.0134-5+b2 [300 kB] Fetched 300 kB in 0s (15.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4icuub12/libxml-libxml-perl_2.0207+dfsg+really+2.0134-5+b2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libxxf86vm1 arm64 1:1.1.4-1+b4 [19.2 kB] Fetched 19.2 kB in 0s (1109 kB/s) dpkg-name: info: moved 'libxxf86vm1_1%3a1.1.4-1+b4_arm64.deb' to '/srv/rebuilderd/tmp/tmpj58kegfu/libxxf86vm1_1.1.4-1+b4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libaudit1 arm64 1:4.0.2-2+b2 [54.6 kB] Fetched 54.6 kB in 0s (3296 kB/s) dpkg-name: info: moved 'libaudit1_1%3a4.0.2-2+b2_arm64.deb' to '/srv/rebuilderd/tmp/tmp4syfiw1h/libaudit1_4.0.2-2+b2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 tar arm64 1.35+dfsg-3.1 [802 kB] Fetched 802 kB in 0s (34.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzfisnms5/tar_1.35+dfsg-3.1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libtiff-dev arm64 4.7.0-3 [471 kB] Fetched 471 kB in 0s (33.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjw_n4vpx/libtiff-dev_4.7.0-3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libcc1-0 arm64 14.2.0-19 [42.2 kB] Fetched 42.2 kB in 0s (2643 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprz2_ikmn/libcc1-0_14.2.0-19_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libasound2-data all 1.2.14-1 [21.1 kB] Fetched 21.1 kB in 0s (1306 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnmm9m8oo/libasound2-data_1.2.14-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 cpp-aarch64-linux-gnu arm64 4:14.2.0-1 [4832 B] Fetched 4832 B in 0s (323 kB/s) dpkg-name: info: moved 'cpp-aarch64-linux-gnu_4%3a14.2.0-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpj2wixtyt/cpp-aarch64-linux-gnu_14.2.0-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libxinerama1 arm64 2:1.1.4-3+b4 [16.0 kB] Fetched 16.0 kB in 0s (834 kB/s) dpkg-name: info: moved 'libxinerama1_2%3a1.1.4-3+b4_arm64.deb' to '/srv/rebuilderd/tmp/tmptulhg1bi/libxinerama1_1.1.4-3+b4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libhwasan0 arm64 14.2.0-19 [1442 kB] Fetched 1442 kB in 0s (85.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp675mrm38/libhwasan0_14.2.0-19_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libdrm-common all 2.4.124-2 [8288 B] Fetched 8288 B in 0s (642 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0jbnskvh/libdrm-common_2.4.124-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 autotools-dev all 20240727.1 [60.2 kB] Fetched 60.2 kB in 0s (3541 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptb19ygst/autotools-dev_20240727.1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libgssapi-krb5-2 arm64 1.21.3-5 [127 kB] Fetched 127 kB in 0s (8634 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr5jkztsy/libgssapi-krb5-2_1.21.3-5_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libtext-unidecode-perl all 1.30-3 [101 kB] Fetched 101 kB in 0s (5469 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr_kep_pw/libtext-unidecode-perl_1.30-3_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 mawk arm64 1.3.4.20250131-1 [134 kB] Fetched 134 kB in 0s (7468 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbefp37zg/mawk_1.3.4.20250131-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libdatrie-dev arm64 0.2.13-3+b1 [18.5 kB] Fetched 18.5 kB in 0s (996 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpk6m3qqi5/libdatrie-dev_0.2.13-3+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 python3-minimal arm64 3.13.3-1 [27.2 kB] Fetched 27.2 kB in 0s (1671 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsbpsq8hc/python3-minimal_3.13.3-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 texlive-fonts-extra all 2024.20250309-2 [624 MB] Fetched 624 MB in 6s (97.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmv3afnb2/texlive-fonts-extra_2024.20250309-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libxdmcp-dev arm64 1:1.1.5-1 [44.2 kB] Fetched 44.2 kB in 0s (2330 kB/s) dpkg-name: info: moved 'libxdmcp-dev_1%3a1.1.5-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpgg78q097/libxdmcp-dev_1.1.5-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libdebhelper-perl all 13.24.2 [90.9 kB] Fetched 90.9 kB in 0s (4115 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1woc96cc/libdebhelper-perl_13.24.2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libblkid1 arm64 2.41-4 [165 kB] Fetched 165 kB in 0s (12.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzlhs9hwf/libblkid1_2.41-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libfreetype6 arm64 2.13.3+dfsg-1 [422 kB] Fetched 422 kB in 0s (16.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_5xfbk9l/libfreetype6_2.13.3+dfsg-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libxft-dev arm64 2.3.6-1+b4 [72.0 kB] Fetched 72.0 kB in 0s (4041 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2s__bll4/libxft-dev_2.3.6-1+b4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 dconf-gsettings-backend arm64 0.40.0-5 [27.3 kB] Fetched 27.3 kB in 0s (1356 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfqpl2cq5/dconf-gsettings-backend_0.40.0-5_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 findutils arm64 4.10.0-3 [696 kB] Fetched 696 kB in 0s (34.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2u52dgk9/findutils_4.10.0-3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libtirpc3t64 arm64 1.3.6+ds-1 [79.1 kB] Fetched 79.1 kB in 0s (4003 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptfj7h820/libtirpc3t64_1.3.6+ds-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libyaml-tiny-perl all 1.76-1 [29.8 kB] Fetched 29.8 kB in 0s (1699 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwmz_mtid/libyaml-tiny-perl_1.76-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libxcomposite1 arm64 1:0.4.6-1 [16.4 kB] Fetched 16.4 kB in 0s (878 kB/s) dpkg-name: info: moved 'libxcomposite1_1%3a0.4.6-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpjt6l5h19/libxcomposite1_0.4.6-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libxml2 arm64 2.12.7+dfsg+really2.9.14-0.4 [629 kB] Fetched 629 kB in 0s (29.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpezexgjyy/libxml2_2.12.7+dfsg+really2.9.14-0.4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libcairo2 arm64 1.18.4-1+b1 [483 kB] Fetched 483 kB in 0s (23.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz796iu_x/libcairo2_1.18.4-1+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 texlive-binaries arm64 2024.20240313.70630+ds-6 [7369 kB] Fetched 7369 kB in 0s (116 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdsidhqy3/texlive-binaries_2024.20240313.70630+ds-6_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 readline-common all 8.2-6 [69.4 kB] Fetched 69.4 kB in 0s (4008 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8vm8g67l/readline-common_8.2-6_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libthai-data all 0.1.29-2 [168 kB] Fetched 168 kB in 0s (8431 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcz96k1vh/libthai-data_0.1.29-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libmount-dev arm64 2.41-4 [30.5 kB] Fetched 30.5 kB in 0s (1332 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv_928ck7/libmount-dev_2.41-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 default-jdk-headless arm64 2:1.21-76 [1124 B] Fetched 1124 B in 0s (70.1 kB/s) dpkg-name: info: moved 'default-jdk-headless_2%3a1.21-76_arm64.deb' to '/srv/rebuilderd/tmp/tmpjl4pyi12/default-jdk-headless_1.21-76_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libwayland-egl1 arm64 1.23.1-3 [5952 B] Fetched 5952 B in 0s (351 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3n9diq3r/libwayland-egl1_1.23.1-3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libgmpxx4ldbl arm64 2:6.3.0+dfsg-3 [329 kB] Fetched 329 kB in 0s (16.5 MB/s) dpkg-name: info: moved 'libgmpxx4ldbl_2%3a6.3.0+dfsg-3_arm64.deb' to '/srv/rebuilderd/tmp/tmp6m82wvrz/libgmpxx4ldbl_6.3.0+dfsg-3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libxcb-shm0-dev arm64 1.17.0-2+b1 [108 kB] Fetched 108 kB in 0s (6179 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpw5fesosr/libxcb-shm0-dev_1.17.0-2+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 shared-mime-info arm64 2.4-5+b2 [756 kB] Fetched 756 kB in 0s (33.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnpl7jdkb/shared-mime-info_2.4-5+b2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libgdbm6t64 arm64 1.24-2 [74.0 kB] Fetched 74.0 kB in 0s (4428 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphkm5n10d/libgdbm6t64_1.24-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libxcb-randr0 arm64 1.17.0-2+b1 [117 kB] Fetched 117 kB in 0s (6358 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2x8x_mgy/libxcb-randr0_1.17.0-2+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 girepository-tools arm64 2.84.1-2 [137 kB] Fetched 137 kB in 0s (7566 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyj1rxjdq/girepository-tools_2.84.1-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libproc2-0 arm64 2:4.0.4-8 [63.0 kB] Fetched 63.0 kB in 0s (3762 kB/s) dpkg-name: info: moved 'libproc2-0_2%3a4.0.4-8_arm64.deb' to '/srv/rebuilderd/tmp/tmpcjnwp212/libproc2-0_4.0.4-8_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libgprofng0 arm64 2.44-3 [668 kB] Fetched 668 kB in 0s (19.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplimtlp0f/libgprofng0_2.44-3_arm64.deb' Downloading dependency 131 of 521: libxcb1:arm64=1.17.0-2+b1 Downloading dependency 132 of 521: native-architecture:arm64=0.2.6 Downloading dependency 133 of 521: fontconfig-config:arm64=2.15.0-2.3 Downloading dependency 134 of 521: libpaper2:arm64=2.2.5-0.3+b2 Downloading dependency 135 of 521: libpam-modules:arm64=1.7.0-3 Downloading dependency 136 of 521: libcloudproviders0:arm64=0.3.6-2 Downloading dependency 137 of 521: libnss3:arm64=2:3.110-1 Downloading dependency 138 of 521: libpcre2-16-0:arm64=10.45-1 Downloading dependency 139 of 521: ncurses-base:arm64=6.5+20250216-2 Downloading dependency 140 of 521: xserver-common:arm64=2:21.1.16-1 Downloading dependency 141 of 521: gcc-14-aarch64-linux-gnu:arm64=14.2.0-19 Downloading dependency 142 of 521: libharfbuzz-cairo0:arm64=10.2.0-1+b1 Downloading dependency 143 of 521: libpango-1.0-0:arm64=1.56.3-1 Downloading dependency 144 of 521: libpotrace0:arm64=1.16-2+b2 Downloading dependency 145 of 521: init-system-helpers:arm64=1.68 Downloading dependency 146 of 521: python3:arm64=3.13.3-1 Downloading dependency 147 of 521: dbus-daemon:arm64=1.16.2-2 Downloading dependency 148 of 521: libcrypt-dev:arm64=1:4.4.38-1 Downloading dependency 149 of 521: libsensors5:arm64=1:3.6.2-2 Downloading dependency 150 of 521: libuuid1:arm64=2.41-4 Downloading dependency 151 of 521: libnghttp3-dev:arm64=1.8.0-1 Downloading dependency 152 of 521: libatk1.0-0t64:arm64=2.56.2-1 Downloading dependency 153 of 521: libgnutls-dane0t64:arm64=3.8.9-2 Downloading dependency 154 of 521: libxss1:arm64=1:1.2.3-1+b3 Downloading dependency 155 of 521: gfortran-aarch64-linux-gnu:arm64=4:14.2.0-1 Downloading dependency 156 of 521: libavahi-common-data:arm64=0.8-16 Downloading dependency 157 of 521: libpango1.0-dev:arm64=1.56.3-1 Downloading dependency 158 of 521: openssl-provider-legacy:arm64=3.5.0-1 Downloading dependency 159 of 521: g++-14:arm64=14.2.0-19 Downloading dependency 160 of 521: gir1.2-pango-1.0:arm64=1.56.3-1 Downloading dependency 161 of 521: cpp-14:arm64=14.2.0-19 Downloading dependency 162 of 521: libsystemd0:arm64=257.5-2 Downloading dependency 163 of 521: dpkg-dev:arm64=1.22.18 Downloading dependency 164 of 521: libgraphite2-3:arm64=1.3.14-2+b1 Downloading dependency 165 of 521: dconf-service:arm64=0.40.0-5 Downloading dependency 166 of 521: icu-devtools:arm64=76.1-3 Downloading dependency 167 of 521: gir1.2-freedesktop:arm64=1.84.0-1 Downloading dependency 168 of 521: xorg-sgml-doctools:arm64=1:1.11-1.1 Downloading dependency 169 of 521: openjdk-21-jre:arm64=21.0.7+6-1 Downloading dependency 170 of 521: libldap-dev:arm64=2.6.9+dfsg-2 Downloading dependency 171 of 521: make:arm64=4.4.1-2 Downloading dependency 172 of 521: libglib2.0-data:arm64=2.84.1-2 Downloading dependency 173 of 521: libfontconfig-dev:arm64=2.15.0-2.3 Downloading dependency 174 of 521: libunicode-linebreak-perl:arm64=0.0.20190101-1+b8 Downloading dependency 175 of 521: libbz2-dev:arm64=1.0.8-6 Downloading dependency 176 of 521: libbrotli-dev:arm64=1.1.0-2+b7 Downloading dependency 177 of 521: sed:arm64=4.9-2+b1 Downloading dependency 178 of 521: at-spi2-common:arm64=2.56.2-1 Downloading dependency 179 of 521: mesa-libgallium:arm64=25.0.4-1 Downloading dependency 180 of 521: libsasl2-2:arm64=2.1.28+dfsg1-9 Downloading dependency 181 of 521: tk8.6:arm64=8.6.16-1 Downloading dependency 182 of 521: base-files:arm64=13.7 Downloading dependency 183 of 521: tk8.6-dev:arm64=8.6.16-1 Downloading dependency 184 of 521: automake:arm64=1:1.17-4 Downloading dependency 185 of 521: dh-strip-nondeterminism:arm64=1.14.1-2 Downloading dependency 186 of 521: libcairo2-dev:arm64=1.18.4-1+b1 Downloading dependency 187 of 521: libjpeg-dev:arm64=1:2.1.5-3.1 Downloading dependency 188 of 521: xz-utils:arm64=5.8.1-1 Downloading dependency 189 of 521: libjpeg62-turbo-dev:arm64=1:2.1.5-3.1 Downloading dependency 190 of 521: libxcb1-dev:arm64=1.17.0-2+b1 Downloading dependency 191 of 521: libc-bin:arm64=2.41-7 Downloading dependency 192 of 521: libssh2-1-dev:arm64=1.11.1-1 Downloading dependency 193 of 521: krb5-multidev:arm64=1.21.3-5 Downloading dependency 194 of 521: libc6-dev:arm64=2.41-7 Downloading dependency 195 of 521: gtk-update-icon-cache:arm64=4.18.4+ds-2 Downloading dependency 196 of 521: libncurses-dev:arm64=6.5+20250216-2 Downloading dependency 197 of 521: libsysprof-capture-4-dev:arm64=48.0-2 Downloading dependency 198 of 521: libgirepository-2.0-0:arm64=2.84.1-2 Downloading dependency 199 of 521: libcom-err2:arm64=1.47.2-1+b1 Downloading dependency 200 of 521: gcc-aarch64-linux-gnu:arm64=4:14.2.0-1 Downloading dependency 201 of 521: libdeflate0:arm64=1.23-2 Downloading dependency 202 of 521: libpng16-16t64:arm64=1.6.47-1.1 Downloading dependency 203 of 521: libgtk-3-common:arm64=3.24.49-3 Downloading dependency 204 of 521: libharfbuzz0b:arm64=10.2.0-1+b1 Downloading dependency 205 of 521: libsepol-dev:arm64=3.8.1-1 Downloading dependency 206 of 521: libz3-4:arm64=4.13.3-1 Downloading dependency 207 of 521: bsdutils:arm64=1:2.41-4 Downloading dependency 208 of 521: libglib2.0-dev-bin:arm64=2.84.1-2 Downloading dependency 209 of 521: libunbound8:arm64=1.22.0-1+b1 Downloading dependency 210 of 521: libtirpc-dev:arm64=1.3.6+ds-1 Downloading dependency 211 of 521: libxml-libxml-perl:arm64=2.0207+dfsg+really+2.0134-5+b2 Downloading dependency 212 of 521: libxxf86vm1:arm64=1:1.1.4-1+b4 Downloading dependency 213 of 521: libaudit1:arm64=1:4.0.2-2+b2 Downloading dependency 214 of 521: tar:arm64=1.35+dfsg-3.1 Downloading dependency 215 of 521: libtiff-dev:arm64=4.7.0-3 Downloading dependency 216 of 521: libcc1-0:arm64=14.2.0-19 Downloading dependency 217 of 521: libasound2-data:arm64=1.2.14-1 Downloading dependency 218 of 521: cpp-aarch64-linux-gnu:arm64=4:14.2.0-1 Downloading dependency 219 of 521: libxinerama1:arm64=2:1.1.4-3+b4 Downloading dependency 220 of 521: libhwasan0:arm64=14.2.0-19 Downloading dependency 221 of 521: libdrm-common:arm64=2.4.124-2 Downloading dependency 222 of 521: autotools-dev:arm64=20240727.1 Downloading dependency 223 of 521: libgssapi-krb5-2:arm64=1.21.3-5 Downloading dependency 224 of 521: libtext-unidecode-perl:arm64=1.30-3 Downloading dependency 225 of 521: mawk:arm64=1.3.4.20250131-1 Downloading dependency 226 of 521: libdatrie-dev:arm64=0.2.13-3+b1 Downloading dependency 227 of 521: python3-minimal:arm64=3.13.3-1 Downloading dependency 228 of 521: texlive-fonts-extra:arm64=2024.20250309-2 Downloading dependency 229 of 521: libxdmcp-dev:arm64=1:1.1.5-1 Downloading dependency 230 of 521: libdebhelper-perl:arm64=13.24.2 Downloading dependency 231 of 521: libblkid1:arm64=2.41-4 Downloading dependency 232 of 521: libfreetype6:arm64=2.13.3+dfsg-1 Downloading dependency 233 of 521: libxft-dev:arm64=2.3.6-1+b4 Downloading dependency 234 of 521: dconf-gsettings-backend:arm64=0.40.0-5 Downloading dependency 235 of 521: findutils:arm64=4.10.0-3 Downloading dependency 236 of 521: libtirpc3t64:arm64=1.3.6+ds-1 Downloading dependency 237 of 521: libyaml-tiny-perl:arm64=1.76-1 Downloading dependency 238 of 521: libxcomposite1:arm64=1:0.4.6-1 Downloading dependency 239 of 521: libxml2:arm64=2.12.7+dfsg+really2.9.14-0.4 Downloading dependency 240 of 521: libcairo2:arm64=1.18.4-1+b1 Downloading dependency 241 of 521: texlive-binaries:arm64=2024.20240313.70630+ds-6 Downloading dependency 242 of 521: readline-common:arm64=8.2-6 Downloading dependency 243 of 521: libthai-data:arm64=0.1.29-2 Downloading dependency 244 of 521: libmount-dev:arm64=2.41-4 Downloading dependency 245 of 521: default-jdk-headless:arm64=2:1.21-76 Downloading dependency 246 of 521: libwayland-egl1:arm64=1.23.1-3 Downloading dependency 247 of 521: libgmpxx4ldbl:arm64=2:6.3.0+dfsg-3 Downloading dependency 248 of 521: libxcb-shm0-dev:arm64=1.17.0-2+b1 Downloading dependency 249 of 521: shared-mime-info:arm64=2.4-5+b2 Downloading dependency 250 of 521: libgdbm6t64:arm64=1.24-2 Downloading dependency 251 of 521: libxcb-randr0:arm64=1.17.0-2+b1 Downloading dependency 252 of 521: girepository-tools:arm64=2.84.1-2 Downloading dependency 253 of 521: libproc2-0:arm64=2:4.0.4-8 Downloading dependency 254 of 521: libgprofng0:arm64=2.44-3 Downloading dependency 255 of 521: texlive-pictures:arm64=2024.20250309-1Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 texlive-pictures all 2024.20250309-1 [17.0 MB] Fetched 17.0 MB in 0s (135 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph041dr5g/texlive-pictures_2024.20250309-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 mpack arm64 1.6-18+b3 [36.0 kB] Fetched 36.0 kB in 0s (1779 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4tqijx9r/mpack_1.6-18+b3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libexpat1-dev arm64 2.7.1-1 [145 kB] Fetched 145 kB in 0s (8364 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp47qcbipi/libexpat1-dev_2.7.1-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 gzip arm64 1.13-1 [135 kB] Fetched 135 kB in 0s (7709 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj3vf_oy5/gzip_1.13-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 bash-completion all 1:2.16.0-7 [319 kB] Fetched 319 kB in 0s (15.5 MB/s) dpkg-name: info: moved 'bash-completion_1%3a2.16.0-7_all.deb' to '/srv/rebuilderd/tmp/tmpy_av8wat/bash-completion_2.16.0-7_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libxcb-sync1 arm64 1.17.0-2+b1 [109 kB] Fetched 109 kB in 0s (4757 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpltegajcz/libxcb-sync1_1.17.0-2+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 pango1.0-tools arm64 1.56.3-1 [43.0 kB] Fetched 43.0 kB in 0s (2591 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpq57zbz5d/pango1.0-tools_1.56.3-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 binutils-aarch64-linux-gnu arm64 2.44-3 [820 kB] Fetched 820 kB in 0s (35.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph5deq8hg/binutils-aarch64-linux-gnu_2.44-3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libcurl4-openssl-dev arm64 8.13.0-5 [480 kB] Fetched 480 kB in 0s (23.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyy_rtiil/libcurl4-openssl-dev_8.13.0-5_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libgcc-s1 arm64 14.2.0-19 [54.1 kB] Fetched 54.1 kB in 0s (3185 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmuriudjz/libgcc-s1_14.2.0-19_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 texlive-fonts-recommended all 2024.20250309-1 [4989 kB] Fetched 4989 kB in 0s (85.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv3of_qxz/texlive-fonts-recommended_2024.20250309-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libpsl5t64 arm64 0.21.2-1.1+b1 [57.1 kB] Fetched 57.1 kB in 0s (3127 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpappefs3q/libpsl5t64_0.21.2-1.1+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libsystemd-shared arm64 257.5-2 [1911 kB] Fetched 1911 kB in 0s (49.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpw4im3e_c/libsystemd-shared_257.5-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 fonts-dejavu-core all 2.37-8 [840 kB] Fetched 840 kB in 0s (34.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbmrtpbby/fonts-dejavu-core_2.37-8_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libxt6t64 arm64 1:1.2.1-1.2+b2 [173 kB] Fetched 173 kB in 0s (9619 kB/s) dpkg-name: info: moved 'libxt6t64_1%3a1.2.1-1.2+b2_arm64.deb' to '/srv/rebuilderd/tmp/tmp88osfe_4/libxt6t64_1.2.1-1.2+b2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 tcl8.6-dev arm64 8.6.16+dfsg-1 [1012 kB] Fetched 1012 kB in 0s (34.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp40u0vh4k/tcl8.6-dev_8.6.16+dfsg-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libwayland-server0 arm64 1.23.1-3 [33.7 kB] Fetched 33.7 kB in 0s (2015 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsfry5yr_/libwayland-server0_1.23.1-3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 debianutils arm64 5.22 [92.3 kB] Fetched 92.3 kB in 0s (3571 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv_od0r1p/debianutils_5.22_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libexpat1 arm64 2.7.1-1 [93.3 kB] Fetched 93.3 kB in 0s (2675 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpg34r4db6/libexpat1_2.7.1-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libtcl8.6 arm64 8.6.16+dfsg-1 [984 kB] Fetched 984 kB in 0s (19.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpie0le4k5/libtcl8.6_8.6.16+dfsg-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libthai0 arm64 0.1.29-2+b1 [48.4 kB] Fetched 48.4 kB in 0s (2456 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7oqxkauj/libthai0_0.1.29-2+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 pkgconf arm64 1.8.1-4 [26.1 kB] Fetched 26.1 kB in 0s (1328 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgu3ldx8g/pkgconf_1.8.1-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 base-passwd arm64 3.6.7 [53.4 kB] Fetched 53.4 kB in 0s (3156 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpabzz2rhj/base-passwd_3.6.7_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libxkbcommon0 arm64 1.7.0-2 [106 kB] Fetched 106 kB in 0s (5152 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdg1p9fi2/libxkbcommon0_1.7.0-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 gfortran arm64 4:14.2.0-1 [1424 B] Fetched 1424 B in 0s (44.4 kB/s) dpkg-name: info: moved 'gfortran_4%3a14.2.0-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpahifwn1v/gfortran_14.2.0-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libedit2 arm64 3.1-20250104-1 [89.3 kB] Fetched 89.3 kB in 0s (4599 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4b3r9ppq/libedit2_3.1-20250104-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 binutils-common arm64 2.44-3 [2509 kB] Fetched 2509 kB in 0s (62.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsl9_tetd/binutils-common_2.44-3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 preview-latex-style all 13.2-1 [350 kB] Fetched 350 kB in 0s (17.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmnfr8s17/preview-latex-style_13.2-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 liblapack3 arm64 3.12.1-2 [1819 kB] Fetched 1819 kB in 0s (56.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9i8itzr2/liblapack3_3.12.1-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libglib2.0-0t64 arm64 2.84.1-2 [1423 kB] Fetched 1423 kB in 0s (43.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn2ns5jvg/libglib2.0-0t64_2.84.1-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB] Fetched 40.2 kB in 0s (2438 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpi8yacdms/libpipeline1_1.5.8-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libudev1 arm64 257.5-2 [143 kB] Fetched 143 kB in 0s (7252 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3l6_mdpq/libudev1_257.5-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 netbase all 6.5 [12.4 kB] Fetched 12.4 kB in 0s (728 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp95w6ii8z/netbase_6.5_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libbrotli1 arm64 1.1.0-2+b7 [308 kB] Fetched 308 kB in 0s (15.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnz0x375g/libbrotli1_1.1.0-2+b7_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libtinfo6 arm64 6.5+20250216-2 [341 kB] Fetched 341 kB in 0s (18.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgnnb39zf/libtinfo6_6.5+20250216-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 texlive-latex-extra all 2024.20250309-2 [25.2 MB] Fetched 25.2 MB in 0s (154 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx111o9xu/texlive-latex-extra_2024.20250309-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libjbig0 arm64 2.1-6.1+b2 [30.4 kB] Fetched 30.4 kB in 0s (1718 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2lq990_z/libjbig0_2.1-6.1+b2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libgfortran5 arm64 14.2.0-19 [361 kB] Fetched 361 kB in 0s (17.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplw_mjj8p/libgfortran5_14.2.0-19_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libxpm4 arm64 1:3.5.17-1+b3 [53.4 kB] Fetched 53.4 kB in 0s (2569 kB/s) dpkg-name: info: moved 'libxpm4_1%3a3.5.17-1+b3_arm64.deb' to '/srv/rebuilderd/tmp/tmpq8o8683u/libxpm4_3.5.17-1+b3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libxt-dev arm64 1:1.2.1-1.2+b2 [404 kB] Fetched 404 kB in 0s (20.3 MB/s) dpkg-name: info: moved 'libxt-dev_1%3a1.2.1-1.2+b2_arm64.deb' to '/srv/rebuilderd/tmp/tmp8wfeef3s/libxt-dev_1.2.1-1.2+b2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libx11-dev arm64 2:1.8.12-1 [883 kB] Fetched 883 kB in 0s (24.3 MB/s) dpkg-name: info: moved 'libx11-dev_2%3a1.8.12-1_arm64.deb' to '/srv/rebuilderd/tmp/tmp2slqds99/libx11-dev_1.8.12-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libsframe1 arm64 2.44-3 [77.8 kB] Fetched 77.8 kB in 0s (1223 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcwzig8e3/libsframe1_2.44-3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 xdg-utils all 1.2.1-2 [75.8 kB] Fetched 75.8 kB in 0s (676 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprf3_piuv/xdg-utils_1.2.1-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 x11proto-core-dev all 2024.1-1 [3312 B] Fetched 3312 B in 0s (198 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzmrilzki/x11proto-core-dev_2024.1-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libreadline8t64 arm64 8.2-6 [159 kB] Fetched 159 kB in 0s (8949 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpq0ne28cr/libreadline8t64_8.2-6_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 coreutils arm64 9.7-2 [2947 kB] Fetched 2947 kB in 0s (68.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvlrj_bp2/coreutils_9.7-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 debconf all 1.5.91 [121 kB] Fetched 121 kB in 0s (5902 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4b9hc88x/debconf_1.5.91_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libbz2-1.0 arm64 1.0.8-6 [37.8 kB] Fetched 37.8 kB in 0s (2066 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp364iw3ux/libbz2-1.0_1.0.8-6_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libgdbm-compat4t64 arm64 1.24-2 [50.3 kB] Fetched 50.3 kB in 0s (2945 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdx3q7mel/libgdbm-compat4t64_1.24-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libxcb-shm0 arm64 1.17.0-2+b1 [105 kB] Fetched 105 kB in 0s (6223 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkexrnmmx/libxcb-shm0_1.17.0-2+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 x11-common all 1:7.7+24 [217 kB] Fetched 217 kB in 0s (11.9 MB/s) dpkg-name: info: moved 'x11-common_1%3a7.7+24_all.deb' to '/srv/rebuilderd/tmp/tmpjptn_yp_/x11-common_7.7+24_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libpaper-utils arm64 2.2.5-0.3+b2 [16.4 kB] Fetched 16.4 kB in 0s (854 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph_f69pbs/libpaper-utils_2.2.5-0.3+b2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libcups2t64 arm64 2.4.10-2+b1 [236 kB] Fetched 236 kB in 0s (12.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbx7bamtt/libcups2t64_2.4.10-2+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libpcre2-8-0 arm64 10.45-1 [262 kB] Fetched 262 kB in 0s (13.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm9v_n3tc/libpcre2-8-0_10.45-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libc-dev-bin arm64 2.41-7 [56.5 kB] Fetched 56.5 kB in 0s (1139 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv32a014p/libc-dev-bin_2.41-7_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libxdamage1 arm64 1:1.1.6-1+b2 [15.6 kB] Fetched 15.6 kB in 0s (944 kB/s) dpkg-name: info: moved 'libxdamage1_1%3a1.1.6-1+b2_arm64.deb' to '/srv/rebuilderd/tmp/tmp34_h73c9/libxdamage1_1.1.6-1+b2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libblas-dev arm64 3.12.1-2 [111 kB] Fetched 111 kB in 0s (6177 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnaex_lw4/libblas-dev_3.12.1-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libcurl4t64 arm64 8.13.0-5 [349 kB] Fetched 349 kB in 0s (18.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppwe7o921/libcurl4t64_8.13.0-5_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libnettle8t64 arm64 3.10.1-1 [311 kB] Fetched 311 kB in 0s (16.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpiqh3j0x4/libnettle8t64_3.10.1-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 debhelper all 13.24.2 [919 kB] Fetched 919 kB in 0s (38.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsqvcvbwg/debhelper_13.24.2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libsensors-config all 1:3.6.2-2 [16.2 kB] Fetched 16.2 kB in 0s (774 kB/s) dpkg-name: info: moved 'libsensors-config_1%3a3.6.2-2_all.deb' to '/srv/rebuilderd/tmp/tmpr_1n0t_1/libsensors-config_3.6.2-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 gettext arm64 0.23.1-2 [1611 kB] Fetched 1611 kB in 0s (52.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplts5_2ni/gettext_0.23.1-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 m4 arm64 1.4.19-8 [285 kB] Fetched 285 kB in 0s (11.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp9r8d03m/m4_1.4.19-8_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libncurses6 arm64 6.5+20250216-2 [96.1 kB] Fetched 96.1 kB in 0s (5421 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0w1l5ppl/libncurses6_6.5+20250216-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libptexenc1 arm64 2024.20240313.70630+ds-6 [48.1 kB] Fetched 48.1 kB in 0s (1834 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpw5lvsv3l/libptexenc1_2024.20240313.70630+ds-6_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libsynctex2 arm64 2024.20240313.70630+ds-6 [60.5 kB] Fetched 60.5 kB in 0s (3368 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpw8_wvcpw/libsynctex2_2024.20240313.70630+ds-6_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 perl arm64 5.40.1-3 [267 kB] Fetched 267 kB in 0s (13.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz5qtk4ii/perl_5.40.1-3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 gcc arm64 4:14.2.0-1 [5136 B] Fetched 5136 B in 0s (294 kB/s) dpkg-name: info: moved 'gcc_4%3a14.2.0-1_arm64.deb' to '/srv/rebuilderd/tmp/tmppvqeu0lm/gcc_14.2.0-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libfreetype-dev arm64 2.13.3+dfsg-1 [600 kB] Fetched 600 kB in 0s (24.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwor4jdtq/libfreetype-dev_2.13.3+dfsg-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libwebp7 arm64 1.5.0-0.1 [271 kB] Fetched 271 kB in 0s (13.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpf3g14z4f/libwebp7_1.5.0-0.1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libsepol2 arm64 3.8.1-1 [266 kB] Fetched 266 kB in 0s (14.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph6da306p/libsepol2_3.8.1-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libp11-kit-dev arm64 0.25.5-3 [208 kB] Fetched 208 kB in 0s (11.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp521trio4/libp11-kit-dev_0.25.5-3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libaudit-common all 1:4.0.2-2 [12.7 kB] Fetched 12.7 kB in 0s (704 kB/s) dpkg-name: info: moved 'libaudit-common_1%3a4.0.2-2_all.deb' to '/srv/rebuilderd/tmp/tmpjs7v1rz0/libaudit-common_4.0.2-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2+b5 [56.8 kB] Fetched 56.8 kB in 0s (3305 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgo1e6tjp/librtmp1_2.4+20151223.gitfa8646d.1-2+b5_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libunwind8 arm64 1.8.1-0.1 [55.2 kB] Fetched 55.2 kB in 0s (3229 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpisjz7k5a/libunwind8_1.8.1-0.1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libfontconfig1 arm64 2.15.0-2.3 [387 kB] Fetched 387 kB in 0s (19.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp25f8t093/libfontconfig1_2.15.0-2.3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libwebp-dev arm64 1.5.0-0.1 [406 kB] Fetched 406 kB in 0s (20.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbj4_pkxi/libwebp-dev_1.5.0-0.1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 openjdk-21-jdk-headless arm64 21.0.7+6-1 [81.9 MB] Fetched 81.9 MB in 1s (126 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpix3d17ua/openjdk-21-jdk-headless_21.0.7+6-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libxcb-dri3-0 arm64 1.17.0-2+b1 [107 kB] Fetched 107 kB in 0s (5817 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkfc6vxlg/libxcb-dri3-0_1.17.0-2+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libjpeg62-turbo arm64 1:2.1.5-3.1 [173 kB] Fetched 173 kB in 0s (9720 kB/s) dpkg-name: info: moved 'libjpeg62-turbo_1%3a2.1.5-3.1_arm64.deb' to '/srv/rebuilderd/tmp/tmpgjvo83mq/libjpeg62-turbo_2.1.5-3.1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libnspr4 arm64 2:4.36-1 [102 kB] Fetched 102 kB in 0s (6025 kB/s) dpkg-name: info: moved 'libnspr4_2%3a4.36-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpkwash3j1/libnspr4_4.36-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libharfbuzz-subset0 arm64 10.2.0-1+b1 [509 kB] Fetched 509 kB in 0s (24.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgm0njy68/libharfbuzz-subset0_10.2.0-1+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libperl5.40 arm64 5.40.1-3 [4126 kB] Fetched 4126 kB in 0s (67.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdruaxjqu/libperl5.40_5.40.1-3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libcrypt1 arm64 1:4.4.38-1 [91.8 kB] Fetched 91.8 kB in 0s (4855 kB/s) dpkg-name: info: moved 'libcrypt1_1%3a4.4.38-1_arm64.deb' to '/srv/rebuilderd/tmp/tmp4dikzyyk/libcrypt1_4.4.38-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libatomic1 arm64 14.2.0-19 [10.1 kB] Fetched 10.1 kB in 0s (226 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjp8aja9u/libatomic1_14.2.0-19_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 x11-xkb-utils arm64 7.7+9 [149 kB] Fetched 149 kB in 0s (6818 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgbmbhbzf/x11-xkb-utils_7.7+9_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 g++-aarch64-linux-gnu arm64 4:14.2.0-1 [1200 B] Fetched 1200 B in 0s (13.7 kB/s) dpkg-name: info: moved 'g++-aarch64-linux-gnu_4%3a14.2.0-1_arm64.deb' to '/srv/rebuilderd/tmp/tmp6pdd4pty/g++-aarch64-linux-gnu_14.2.0-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libglx0 arm64 1.7.0-1+b2 [31.1 kB] Fetched 31.1 kB in 0s (1108 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsc60gqga/libglx0_1.7.0-1+b2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libtk8.6 arm64 8.6.16-1 [741 kB] Fetched 741 kB in 0s (30.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8qnht96t/libtk8.6_8.6.16-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libdeflate-dev arm64 1.23-2 [51.3 kB] Fetched 51.3 kB in 0s (2898 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyu74qloa/libdeflate-dev_1.23-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libxrender1 arm64 1:0.9.12-1 [27.0 kB] Fetched 27.0 kB in 0s (1625 kB/s) dpkg-name: info: moved 'libxrender1_1%3a0.9.12-1_arm64.deb' to '/srv/rebuilderd/tmp/tmp3l7ctkdv/libxrender1_0.9.12-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libtiffxx6 arm64 4.7.0-3 [164 kB] Fetched 164 kB in 0s (9015 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1hwrufuj/libtiffxx6_4.7.0-3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libgnutls28-dev arm64 3.8.9-2 [1419 kB] Fetched 1419 kB in 0s (50.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbbz0taf9/libgnutls28-dev_3.8.9-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 texlive-latex-base all 2024.20250309-1 [1294 kB] Fetched 1294 kB in 0s (47.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9e1qrh4c/texlive-latex-base_2024.20250309-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 gettext-base arm64 0.23.1-2 [241 kB] Fetched 241 kB in 0s (13.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgj_gwv2n/gettext-base_0.23.1-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libasan8 arm64 14.2.0-19 [2578 kB] Fetched 2578 kB in 0s (68.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3cn2sa1i/libasan8_14.2.0-19_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libblkid-dev arm64 2.41-4 [211 kB] Fetched 211 kB in 0s (20.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp78mp056/libblkid-dev_2.41-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libfile-homedir-perl all 1.006-2 [42.4 kB] Fetched 42.4 kB in 0s (2565 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpocyy6lpv/libfile-homedir-perl_1.006-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libkpathsea6 arm64 2024.20240313.70630+ds-6 [154 kB] Fetched 154 kB in 0s (10.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8ka5fwqu/libkpathsea6_2024.20240313.70630+ds-6_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 xfonts-utils arm64 1:7.7+7 [89.3 kB] Fetched 89.3 kB in 0s (5327 kB/s) dpkg-name: info: moved 'xfonts-utils_1%3a7.7+7_arm64.deb' to '/srv/rebuilderd/tmp/tmp5jqrbfw8/xfonts-utils_7.7+7_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libidn2-0 arm64 2.3.8-2 [107 kB] Fetched 107 kB in 0s (6259 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp814y8axc/libidn2-0_2.3.8-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libblas3 arm64 3.12.1-2 [104 kB] Fetched 104 kB in 0s (1583 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpco9zno6e/libblas3_3.12.1-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 gir1.2-freedesktop-dev arm64 1.84.0-1 [51.6 kB] Fetched 51.6 kB in 0s (2133 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv9_unx19/gir1.2-freedesktop-dev_1.84.0-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 openjdk-21-jdk arm64 21.0.7+6-1 [3557 kB] Fetched 3557 kB in 0s (21.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp61qgm6nd/openjdk-21-jdk_21.0.7+6-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libtext-wrapi18n-perl all 0.06-10 [8808 B] Fetched 8808 B in 0s (146 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjonaa1xg/libtext-wrapi18n-perl_0.06-10_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 dbus-session-bus-common all 1.16.2-2 [52.3 kB] Fetched 52.3 kB in 0s (3120 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcwuy2y74/dbus-session-bus-common_1.16.2-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 liblcms2-2 arm64 2.16-2 [151 kB] Fetched 151 kB in 0s (8352 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcxvha_xz/liblcms2-2_2.16-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libssh2-1t64 arm64 1.11.1-1 [235 kB] Fetched 235 kB in 0s (12.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptm1r4i1e/libssh2-1t64_1.11.1-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libasound2t64 arm64 1.2.14-1 [342 kB] Fetched 342 kB in 0s (17.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzfn71eul/libasound2t64_1.2.14-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 python3.13 arm64 3.13.3-2 [751 kB] Fetched 751 kB in 0s (30.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcop_nn29/python3.13_3.13.3-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 texlive-luatex all 2024.20250309-1 [29.1 MB] Fetched 29.1 MB in 0s (85.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph22pr59w/texlive-luatex_2024.20250309-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libevent-2.1-7t64 arm64 2.1.12-stable-10+b1 [170 kB] Fetched 170 kB in 0s (9579 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpde43aj8c/libevent-2.1-7t64_2.1.12-stable-10+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libpython3.13-minimal arm64 3.13.3-2 [855 kB] Fetched 855 kB in 0s (37.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3ie22rs1/libpython3.13-minimal_3.13.3-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libxshmfence1 arm64 1.3.3-1 [11.1 kB] Fetched 11.1 kB in 0s (639 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6ab7n98n/libxshmfence1_1.3.3-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 gir1.2-glib-2.0 arm64 2.84.1-2 [197 kB] Fetched 197 kB in 0s (10.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmn66e5s1/gir1.2-glib-2.0_2.84.1-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libgraphite2-dev arm64 1.3.14-2+b1 [20.3 kB] Fetched 20.3 kB in 0s (1179 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1eb25f54/libgraphite2-dev_1.3.14-2+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libicu76 arm64 76.1-3 [9526 kB] Fetched 9526 kB in 0s (110 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4kzyh80y/libicu76_76.1-3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libjbig-dev arm64 2.1-6.1+b2 [30.5 kB] Fetched 30.5 kB in 0s (1877 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3fmup165/libjbig-dev_2.1-6.1+b2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libbinutils arm64 2.44-3 [660 kB] Fetched 660 kB in 0s (30.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt_s18_is/libbinutils_2.44-3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libzstd-dev arm64 1.5.7+dfsg-1 [335 kB] Fetched 335 kB in 0s (17.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpop_czfyp/libzstd-dev_1.5.7+dfsg-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libavahi-client3 arm64 0.8-16 [46.7 kB] Fetched 46.7 kB in 0s (2799 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbjr81407/libavahi-client3_0.8-16_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libpng-dev arm64 1.6.47-1.1 [360 kB] Fetched 360 kB in 0s (18.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplxfeazjh/libpng-dev_1.6.47-1.1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 dash arm64 0.5.12-12 [95.6 kB] Fetched 95.6 kB in 0s (5443 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_huh6hma/dash_0.5.12-12_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 g++ arm64 4:14.2.0-1 [1332 B] Fetched 1332 B in 0s (79.6 kB/s) dpkg-name: info: moved 'g++_4%3a14.2.0-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpubdmv4aw/g++_14.2.0-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 liblerc-dev arm64 4.0.0+ds-5 [164 kB] Fetched 164 kB in 0s (8999 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc978gukh/liblerc-dev_4.0.0+ds-5_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 adwaita-icon-theme all 48.0-1 [504 kB] Fetched 504 kB in 0s (23.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2e9uqlds/adwaita-icon-theme_48.0-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libffi8 arm64 3.4.8-2 [21.3 kB] Fetched 21.3 kB in 0s (1227 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3teycnlw/libffi8_3.4.8-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libice-dev arm64 2:1.1.1-1 [73.0 kB] Fetched 73.0 kB in 0s (4248 kB/s) dpkg-name: info: moved 'libice-dev_2%3a1.1.1-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpilk307x2/libice-dev_1.1.1-1_arm64.deb' Downloading dependency 256 of 521: mpack:arm64=1.6-18+b3 Downloading dependency 257 of 521: libexpat1-dev:arm64=2.7.1-1 Downloading dependency 258 of 521: gzip:arm64=1.13-1 Downloading dependency 259 of 521: bash-completion:arm64=1:2.16.0-7 Downloading dependency 260 of 521: libxcb-sync1:arm64=1.17.0-2+b1 Downloading dependency 261 of 521: pango1.0-tools:arm64=1.56.3-1 Downloading dependency 262 of 521: binutils-aarch64-linux-gnu:arm64=2.44-3 Downloading dependency 263 of 521: libcurl4-openssl-dev:arm64=8.13.0-5 Downloading dependency 264 of 521: libgcc-s1:arm64=14.2.0-19 Downloading dependency 265 of 521: texlive-fonts-recommended:arm64=2024.20250309-1 Downloading dependency 266 of 521: libpsl5t64:arm64=0.21.2-1.1+b1 Downloading dependency 267 of 521: libsystemd-shared:arm64=257.5-2 Downloading dependency 268 of 521: fonts-dejavu-core:arm64=2.37-8 Downloading dependency 269 of 521: libxt6t64:arm64=1:1.2.1-1.2+b2 Downloading dependency 270 of 521: tcl8.6-dev:arm64=8.6.16+dfsg-1 Downloading dependency 271 of 521: libwayland-server0:arm64=1.23.1-3 Downloading dependency 272 of 521: debianutils:arm64=5.22 Downloading dependency 273 of 521: libexpat1:arm64=2.7.1-1 Downloading dependency 274 of 521: libtcl8.6:arm64=8.6.16+dfsg-1 Downloading dependency 275 of 521: libthai0:arm64=0.1.29-2+b1 Downloading dependency 276 of 521: pkgconf:arm64=1.8.1-4 Downloading dependency 277 of 521: base-passwd:arm64=3.6.7 Downloading dependency 278 of 521: libxkbcommon0:arm64=1.7.0-2 Downloading dependency 279 of 521: gfortran:arm64=4:14.2.0-1 Downloading dependency 280 of 521: libedit2:arm64=3.1-20250104-1 Downloading dependency 281 of 521: binutils-common:arm64=2.44-3 Downloading dependency 282 of 521: preview-latex-style:arm64=13.2-1 Downloading dependency 283 of 521: liblapack3:arm64=3.12.1-2 Downloading dependency 284 of 521: libglib2.0-0t64:arm64=2.84.1-2 Downloading dependency 285 of 521: libpipeline1:arm64=1.5.8-1 Downloading dependency 286 of 521: libudev1:arm64=257.5-2 Downloading dependency 287 of 521: netbase:arm64=6.5 Downloading dependency 288 of 521: libbrotli1:arm64=1.1.0-2+b7 Downloading dependency 289 of 521: libtinfo6:arm64=6.5+20250216-2 Downloading dependency 290 of 521: texlive-latex-extra:arm64=2024.20250309-2 Downloading dependency 291 of 521: libjbig0:arm64=2.1-6.1+b2 Downloading dependency 292 of 521: libgfortran5:arm64=14.2.0-19 Downloading dependency 293 of 521: libxpm4:arm64=1:3.5.17-1+b3 Downloading dependency 294 of 521: libxt-dev:arm64=1:1.2.1-1.2+b2 Downloading dependency 295 of 521: libx11-dev:arm64=2:1.8.12-1 Downloading dependency 296 of 521: libsframe1:arm64=2.44-3 Downloading dependency 297 of 521: xdg-utils:arm64=1.2.1-2 Downloading dependency 298 of 521: x11proto-core-dev:arm64=2024.1-1 Downloading dependency 299 of 521: libreadline8t64:arm64=8.2-6 Downloading dependency 300 of 521: coreutils:arm64=9.7-2 Downloading dependency 301 of 521: debconf:arm64=1.5.91 Downloading dependency 302 of 521: libbz2-1.0:arm64=1.0.8-6 Downloading dependency 303 of 521: libgdbm-compat4t64:arm64=1.24-2 Downloading dependency 304 of 521: libxcb-shm0:arm64=1.17.0-2+b1 Downloading dependency 305 of 521: x11-common:arm64=1:7.7+24 Downloading dependency 306 of 521: libpaper-utils:arm64=2.2.5-0.3+b2 Downloading dependency 307 of 521: libcups2t64:arm64=2.4.10-2+b1 Downloading dependency 308 of 521: libpcre2-8-0:arm64=10.45-1 Downloading dependency 309 of 521: libc-dev-bin:arm64=2.41-7 Downloading dependency 310 of 521: libxdamage1:arm64=1:1.1.6-1+b2 Downloading dependency 311 of 521: libblas-dev:arm64=3.12.1-2 Downloading dependency 312 of 521: libcurl4t64:arm64=8.13.0-5 Downloading dependency 313 of 521: libnettle8t64:arm64=3.10.1-1 Downloading dependency 314 of 521: debhelper:arm64=13.24.2 Downloading dependency 315 of 521: libsensors-config:arm64=1:3.6.2-2 Downloading dependency 316 of 521: gettext:arm64=0.23.1-2 Downloading dependency 317 of 521: m4:arm64=1.4.19-8 Downloading dependency 318 of 521: libncurses6:arm64=6.5+20250216-2 Downloading dependency 319 of 521: libptexenc1:arm64=2024.20240313.70630+ds-6 Downloading dependency 320 of 521: libsynctex2:arm64=2024.20240313.70630+ds-6 Downloading dependency 321 of 521: perl:arm64=5.40.1-3 Downloading dependency 322 of 521: gcc:arm64=4:14.2.0-1 Downloading dependency 323 of 521: libfreetype-dev:arm64=2.13.3+dfsg-1 Downloading dependency 324 of 521: libwebp7:arm64=1.5.0-0.1 Downloading dependency 325 of 521: libsepol2:arm64=3.8.1-1 Downloading dependency 326 of 521: libp11-kit-dev:arm64=0.25.5-3 Downloading dependency 327 of 521: libaudit-common:arm64=1:4.0.2-2 Downloading dependency 328 of 521: librtmp1:arm64=2.4+20151223.gitfa8646d.1-2+b5 Downloading dependency 329 of 521: libunwind8:arm64=1.8.1-0.1 Downloading dependency 330 of 521: libfontconfig1:arm64=2.15.0-2.3 Downloading dependency 331 of 521: libwebp-dev:arm64=1.5.0-0.1 Downloading dependency 332 of 521: openjdk-21-jdk-headless:arm64=21.0.7+6-1 Downloading dependency 333 of 521: libxcb-dri3-0:arm64=1.17.0-2+b1 Downloading dependency 334 of 521: libjpeg62-turbo:arm64=1:2.1.5-3.1 Downloading dependency 335 of 521: libnspr4:arm64=2:4.36-1 Downloading dependency 336 of 521: libharfbuzz-subset0:arm64=10.2.0-1+b1 Downloading dependency 337 of 521: libperl5.40:arm64=5.40.1-3 Downloading dependency 338 of 521: libcrypt1:arm64=1:4.4.38-1 Downloading dependency 339 of 521: libatomic1:arm64=14.2.0-19 Downloading dependency 340 of 521: x11-xkb-utils:arm64=7.7+9 Downloading dependency 341 of 521: g++-aarch64-linux-gnu:arm64=4:14.2.0-1 Downloading dependency 342 of 521: libglx0:arm64=1.7.0-1+b2 Downloading dependency 343 of 521: libtk8.6:arm64=8.6.16-1 Downloading dependency 344 of 521: libdeflate-dev:arm64=1.23-2 Downloading dependency 345 of 521: libxrender1:arm64=1:0.9.12-1 Downloading dependency 346 of 521: libtiffxx6:arm64=4.7.0-3 Downloading dependency 347 of 521: libgnutls28-dev:arm64=3.8.9-2 Downloading dependency 348 of 521: texlive-latex-base:arm64=2024.20250309-1 Downloading dependency 349 of 521: gettext-base:arm64=0.23.1-2 Downloading dependency 350 of 521: libasan8:arm64=14.2.0-19 Downloading dependency 351 of 521: libblkid-dev:arm64=2.41-4 Downloading dependency 352 of 521: libfile-homedir-perl:arm64=1.006-2 Downloading dependency 353 of 521: libkpathsea6:arm64=2024.20240313.70630+ds-6 Downloading dependency 354 of 521: xfonts-utils:arm64=1:7.7+7 Downloading dependency 355 of 521: libidn2-0:arm64=2.3.8-2 Downloading dependency 356 of 521: libblas3:arm64=3.12.1-2 Downloading dependency 357 of 521: gir1.2-freedesktop-dev:arm64=1.84.0-1 Downloading dependency 358 of 521: openjdk-21-jdk:arm64=21.0.7+6-1 Downloading dependency 359 of 521: libtext-wrapi18n-perl:arm64=0.06-10 Downloading dependency 360 of 521: dbus-session-bus-common:arm64=1.16.2-2 Downloading dependency 361 of 521: liblcms2-2:arm64=2.16-2 Downloading dependency 362 of 521: libssh2-1t64:arm64=1.11.1-1 Downloading dependency 363 of 521: libasound2t64:arm64=1.2.14-1 Downloading dependency 364 of 521: python3.13:arm64=3.13.3-2 Downloading dependency 365 of 521: texlive-luatex:arm64=2024.20250309-1 Downloading dependency 366 of 521: libevent-2.1-7t64:arm64=2.1.12-stable-10+b1 Downloading dependency 367 of 521: libpython3.13-minimal:arm64=3.13.3-2 Downloading dependency 368 of 521: libxshmfence1:arm64=1.3.3-1 Downloading dependency 369 of 521: gir1.2-glib-2.0:arm64=2.84.1-2 Downloading dependency 370 of 521: libgraphite2-dev:arm64=1.3.14-2+b1 Downloading dependency 371 of 521: libicu76:arm64=76.1-3 Downloading dependency 372 of 521: libjbig-dev:arm64=2.1-6.1+b2 Downloading dependency 373 of 521: libbinutils:arm64=2.44-3 Downloading dependency 374 of 521: libzstd-dev:arm64=1.5.7+dfsg-1 Downloading dependency 375 of 521: libavahi-client3:arm64=0.8-16 Downloading dependency 376 of 521: libpng-dev:arm64=1.6.47-1.1 Downloading dependency 377 of 521: dash:arm64=0.5.12-12 Downloading dependency 378 of 521: g++:arm64=4:14.2.0-1 Downloading dependency 379 of 521: liblerc-dev:arm64=4.0.0+ds-5 Downloading dependency 380 of 521: adwaita-icon-theme:arm64=48.0-1 Downloading dependency 381 of 521: libffi8:arm64=3.4.8-2 Downloading dependency 382 of 521: libice-dev:arm64=2:1.1.1-1 Downloading dependency 383 of 521: libtsan2:arm64=14.2.0-19Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libtsan2 arm64 14.2.0-19 [2383 kB] Fetched 2383 kB in 0s (64.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1zjg2675/libtsan2_14.2.0-19_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Fetched 19.7 kB in 0s (798 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkiz7t3_1/libfile-stripnondeterminism-perl_1.14.1-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libpam-runtime all 1.7.0-3 [248 kB] Fetched 248 kB in 0s (13.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_mou852o/libpam-runtime_1.7.0-3_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libglib2.0-bin arm64 2.84.1-2 [125 kB] Fetched 125 kB in 0s (6769 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphkdtn2qj/libglib2.0-bin_2.84.1-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libwebpdemux2 arm64 1.5.0-0.1 [113 kB] Fetched 113 kB in 0s (6591 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl8mnjso4/libwebpdemux2_1.5.0-0.1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 tcl8.6 arm64 8.6.16+dfsg-1 [121 kB] Fetched 121 kB in 0s (6907 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps31lpjcc/tcl8.6_8.6.16+dfsg-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Fetched 248 kB in 0s (12.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxgjmw4a1/po-debconf_1.0.21+nmu1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libdb5.3t64 arm64 5.3.28+dfsg2-9 [629 kB] Fetched 629 kB in 0s (28.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptxdmlacw/libdb5.3t64_5.3.28+dfsg2-9_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 patch arm64 2.8-1 [128 kB] Fetched 128 kB in 0s (7207 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphfmk2yqx/patch_2.8-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libitm1 arm64 14.2.0-19 [24.2 kB] Fetched 24.2 kB in 0s (1488 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqujty6py/libitm1_14.2.0-19_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libharfbuzz-icu0 arm64 10.2.0-1+b1 [15.9 kB] Fetched 15.9 kB in 0s (969 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmxvjdeyb/libharfbuzz-icu0_10.2.0-1+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libxmuu1 arm64 2:1.1.3-3+b4 [22.0 kB] Fetched 22.0 kB in 0s (1342 kB/s) dpkg-name: info: moved 'libxmuu1_2%3a1.1.3-3+b4_arm64.deb' to '/srv/rebuilderd/tmp/tmpav2gc1c1/libxmuu1_1.1.3-3+b4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libharfbuzz-dev arm64 10.2.0-1+b1 [145 kB] Fetched 145 kB in 0s (8163 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj4rik2ky/libharfbuzz-dev_10.2.0-1+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libcolord2 arm64 1.4.7-3 [130 kB] Fetched 130 kB in 0s (7439 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_25x5gnj/libcolord2_1.4.7-3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 pkgconf-bin arm64 1.8.1-4 [29.6 kB] Fetched 29.6 kB in 0s (1597 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplepureit/pkgconf-bin_1.8.1-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libxcb-render0-dev arm64 1.17.0-2+b1 [119 kB] Fetched 119 kB in 0s (6593 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_j3_cq1q/libxcb-render0-dev_1.17.0-2+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 tzdata all 2025b-2 [260 kB] Fetched 260 kB in 0s (14.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz8nykaru/tzdata_2025b-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libncursesw6 arm64 6.5+20250216-2 [124 kB] Fetched 124 kB in 0s (6808 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn4psjljj/libncursesw6_6.5+20250216-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 liblapack-dev arm64 3.12.1-2 [3726 kB] Fetched 3726 kB in 0s (79.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl8kmoosz/liblapack-dev_3.12.1-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 gcc-14-base arm64 14.2.0-19 [49.4 kB] Fetched 49.4 kB in 0s (2877 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpq3f5urqw/gcc-14-base_14.2.0-19_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libzzip-0-13t64 arm64 0.13.78+dfsg.1-0.1 [59.4 kB] Fetched 59.4 kB in 0s (3393 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplna8alv4/libzzip-0-13t64_0.13.78+dfsg.1-0.1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libsharpyuv0 arm64 1.5.0-0.1 [114 kB] Fetched 114 kB in 0s (6427 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyij6aqxd/libsharpyuv0_1.5.0-0.1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libatk-bridge2.0-0t64 arm64 2.56.2-1 [64.8 kB] Fetched 64.8 kB in 0s (3725 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpediqg92u/libatk-bridge2.0-0t64_2.56.2-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libpam-systemd arm64 257.5-2 [275 kB] Fetched 275 kB in 0s (14.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9ayyqzig/libpam-systemd_257.5-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libattr1 arm64 1:2.5.2-3 [22.7 kB] Fetched 22.7 kB in 0s (1356 kB/s) dpkg-name: info: moved 'libattr1_1%3a2.5.2-3_arm64.deb' to '/srv/rebuilderd/tmp/tmpobv1vhff/libattr1_2.5.2-3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 ucf all 3.0051 [42.8 kB] Fetched 42.8 kB in 0s (2574 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7unvz6ql/ucf_3.0051_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 lmodern all 2.005-1 [9480 kB] Fetched 9480 kB in 0s (111 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpaylsyxo2/lmodern_2.005-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libpcre2-posix3 arm64 10.45-1 [63.7 kB] Fetched 63.7 kB in 0s (3834 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo2x5aork/libpcre2-posix3_10.45-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 autoconf all 2.72-3.1 [494 kB] Fetched 494 kB in 0s (23.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnqvixlno/autoconf_2.72-3.1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 t1utils arm64 1.41-4+b1 [57.6 kB] Fetched 57.6 kB in 0s (3244 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkfq5iks6/t1utils_1.41-4+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libmagic-mgc arm64 1:5.46-5 [338 kB] Fetched 338 kB in 0s (17.4 MB/s) dpkg-name: info: moved 'libmagic-mgc_1%3a5.46-5_arm64.deb' to '/srv/rebuilderd/tmp/tmpbxrx4bj5/libmagic-mgc_5.46-5_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 python3-packaging all 25.0-1 [56.6 kB] Fetched 56.6 kB in 0s (2696 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkayna3v0/python3-packaging_25.0-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 perl-base arm64 5.40.1-3 [1526 kB] Fetched 1526 kB in 0s (35.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqq4rbq0z/perl-base_5.40.1-3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libkadm5clnt-mit12 arm64 1.21.3-5 [41.1 kB] Fetched 41.1 kB in 0s (2024 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6n0od2tu/libkadm5clnt-mit12_1.21.3-5_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 liblzo2-2 arm64 2.10-3+b1 [49.6 kB] Fetched 49.6 kB in 0s (2964 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptwjtusrn/liblzo2-2_2.10-3+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libgdk-pixbuf-2.0-0 arm64 2.42.12+dfsg-2 [131 kB] Fetched 131 kB in 0s (7441 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpinbtchvt/libgdk-pixbuf-2.0-0_2.42.12+dfsg-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libxrender-dev arm64 1:0.9.12-1 [38.8 kB] Fetched 38.8 kB in 0s (2314 kB/s) dpkg-name: info: moved 'libxrender-dev_1%3a0.9.12-1_arm64.deb' to '/srv/rebuilderd/tmp/tmp8tkfgb_g/libxrender-dev_0.9.12-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libtext-charwidth-perl arm64 0.04-11+b4 [9652 B] Fetched 9652 B in 0s (580 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8u8dqa5b/libtext-charwidth-perl_0.04-11+b4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libpangoft2-1.0-0 arm64 1.56.3-1 [52.9 kB] Fetched 52.9 kB in 0s (3046 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgxx_pyyl/libpangoft2-1.0-0_1.56.3-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libidn2-dev arm64 2.3.8-2 [101 kB] Fetched 101 kB in 0s (6100 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4y3pt367/libidn2-dev_2.3.8-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libsombok3 arm64 2.4.0-2+b2 [29.9 kB] Fetched 29.9 kB in 0s (449 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpex4okaxb/libsombok3_2.4.0-2+b2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libpython3-stdlib arm64 3.13.3-1 [10.2 kB] Fetched 10.2 kB in 0s (613 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5qbc832l/libpython3-stdlib_3.13.3-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1+b1 [917 kB] Fetched 917 kB in 0s (38.0 MB/s) dpkg-name: info: moved 'zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmpq9teu_zi/zlib1g-dev_1.3.dfsg+really1.3.1-1+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 liblzma-dev arm64 5.8.1-1 [344 kB] Fetched 344 kB in 0s (19.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqqlzf4wm/liblzma-dev_5.8.1-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libnghttp3-9 arm64 1.8.0-1 [63.2 kB] Fetched 63.2 kB in 0s (3717 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn0up5yzy/libnghttp3-9_1.8.0-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 liblzma5 arm64 5.8.1-1 [303 kB] Fetched 303 kB in 0s (16.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpptspu6tl/liblzma5_5.8.1-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libsm6 arm64 2:1.2.6-1 [36.4 kB] Fetched 36.4 kB in 0s (2193 kB/s) dpkg-name: info: moved 'libsm6_2%3a1.2.6-1_arm64.deb' to '/srv/rebuilderd/tmp/tmphasa07bt/libsm6_1.2.6-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 groff-base arm64 1.23.0-7 [1129 kB] Fetched 1129 kB in 0s (44.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbto68j79/groff-base_1.23.0-7_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libfontenc1 arm64 1:1.1.8-1+b2 [22.5 kB] Fetched 22.5 kB in 0s (1341 kB/s) dpkg-name: info: moved 'libfontenc1_1%3a1.1.8-1+b2_arm64.deb' to '/srv/rebuilderd/tmp/tmpn2kg8exg/libfontenc1_1.1.8-1+b2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libstdc++-14-dev arm64 14.2.0-19 [2295 kB] Fetched 2295 kB in 0s (114 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl92zhes1/libstdc++-14-dev_14.2.0-19_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 default-jdk arm64 2:1.21-76 [1076 B] Fetched 1076 B in 0s (80.1 kB/s) dpkg-name: info: moved 'default-jdk_2%3a1.21-76_arm64.deb' to '/srv/rebuilderd/tmp/tmpqrqk2kzw/default-jdk_1.21-76_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libpcsclite1 arm64 2.3.3-1 [55.0 kB] Fetched 55.0 kB in 0s (2255 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpa0brduaj/libpcsclite1_2.3.3-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 dpkg arm64 1.22.18 [1529 kB] Fetched 1529 kB in 0s (51.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpocq8ssc9/dpkg_1.22.18_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libgtk-3-0t64 arm64 3.24.49-3 [2565 kB] Fetched 2565 kB in 0s (68.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfd31ub7c/libgtk-3-0t64_3.24.49-3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libgl1 arm64 1.7.0-1+b2 [90.9 kB] Fetched 90.9 kB in 0s (5448 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuzi3q6bm/libgl1_1.7.0-1+b2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 default-jre arm64 2:1.21-76 [1068 B] Fetched 1068 B in 0s (63.5 kB/s) dpkg-name: info: moved 'default-jre_2%3a1.21-76_arm64.deb' to '/srv/rebuilderd/tmp/tmpt3h4n9wf/default-jre_1.21-76_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 texlive-base all 2024.20250309-1 [23.1 MB] Fetched 23.1 MB in 0s (172 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoh3zjj_m/texlive-base_2024.20250309-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libatspi2.0-0t64 arm64 2.56.2-1 [76.5 kB] Fetched 76.5 kB in 0s (7463 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2_mm4zcd/libatspi2.0-0t64_2.56.2-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libgmp-dev arm64 2:6.3.0+dfsg-3 [621 kB] Fetched 621 kB in 0s (31.7 MB/s) dpkg-name: info: moved 'libgmp-dev_2%3a6.3.0+dfsg-3_arm64.deb' to '/srv/rebuilderd/tmp/tmpjxtjxetm/libgmp-dev_6.3.0+dfsg-3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 texlive-latex-recommended all 2024.20250309-1 [8745 kB] Fetched 8745 kB in 0s (108 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps3tk156i/texlive-latex-recommended_2024.20250309-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libsm-dev arm64 2:1.2.6-1 [40.2 kB] Fetched 40.2 kB in 0s (2382 kB/s) dpkg-name: info: moved 'libsm-dev_2%3a1.2.6-1_arm64.deb' to '/srv/rebuilderd/tmp/tmphrnci_l4/libsm-dev_1.2.6-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libnghttp2-dev arm64 1.64.0-1.1 [112 kB] Fetched 112 kB in 0s (6340 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7cirsrng/libnghttp2-dev_1.64.0-1.1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 diffutils arm64 1:3.10-4 [378 kB] Fetched 378 kB in 0s (19.1 MB/s) dpkg-name: info: moved 'diffutils_1%3a3.10-4_arm64.deb' to '/srv/rebuilderd/tmp/tmp60pyonhu/diffutils_3.10-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libsmartcols1 arm64 2.41-4 [139 kB] Fetched 139 kB in 0s (7853 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu94nohza/libsmartcols1_2.41-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libwayland-client0 arm64 1.23.1-3 [26.1 kB] Fetched 26.1 kB in 0s (1557 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb7pvulf_/libwayland-client0_1.23.1-3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libxi6 arm64 2:1.8.2-1 [77.8 kB] Fetched 77.8 kB in 0s (4235 kB/s) dpkg-name: info: moved 'libxi6_2%3a1.8.2-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpc4p8kq95/libxi6_1.8.2-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 gfortran-14 arm64 14.2.0-19 [14.5 kB] Fetched 14.5 kB in 0s (880 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2ooe3qxj/gfortran-14_14.2.0-19_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libbsd0 arm64 0.12.2-2 [129 kB] Fetched 129 kB in 0s (7277 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7er9yd5s/libbsd0_0.12.2-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libxfont2 arm64 1:2.0.6-1+b3 [124 kB] Fetched 124 kB in 0s (7177 kB/s) dpkg-name: info: moved 'libxfont2_1%3a2.0.6-1+b3_arm64.deb' to '/srv/rebuilderd/tmp/tmp1kahwnbf/libxfont2_2.0.6-1+b3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libgbm1 arm64 25.0.4-1 [43.6 kB] Fetched 43.6 kB in 0s (2483 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_dv3155z/libgbm1_25.0.4-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 ca-certificates all 20250419 [162 kB] Fetched 162 kB in 0s (8791 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx75fcdb8/ca-certificates_20250419_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libfribidi-dev arm64 1.0.16-1 [65.9 kB] Fetched 65.9 kB in 0s (3865 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpffkey39u/libfribidi-dev_1.0.16-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 dbus-system-bus-common all 1.16.2-2 [53.5 kB] Fetched 53.5 kB in 0s (2720 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbw85hw9o/dbus-system-bus-common_1.16.2-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 ca-certificates-java all 20240118 [11.6 kB] Fetched 11.6 kB in 0s (689 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4z1ku72t/ca-certificates-java_20240118_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 gir1.2-glib-2.0-dev arm64 2.84.1-2 [914 kB] Fetched 914 kB in 0s (38.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpk0li_0r4/gir1.2-glib-2.0-dev_2.84.1-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 dh-autoreconf all 20 [17.1 kB] Fetched 17.1 kB in 0s (940 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj5kkovkz/dh-autoreconf_20_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libxext-dev arm64 2:1.3.4-1+b3 [105 kB] Fetched 105 kB in 0s (5944 kB/s) dpkg-name: info: moved 'libxext-dev_2%3a1.3.4-1+b3_arm64.deb' to '/srv/rebuilderd/tmp/tmp72j3lqci/libxext-dev_1.3.4-1+b3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 bison arm64 2:3.8.2+dfsg-1+b2 [1149 kB] Fetched 1149 kB in 0s (44.1 MB/s) dpkg-name: info: moved 'bison_2%3a3.8.2+dfsg-1+b2_arm64.deb' to '/srv/rebuilderd/tmp/tmpw1cfva9u/bison_3.8.2+dfsg-1+b2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libffi-dev arm64 3.4.8-2 [57.2 kB] Fetched 57.2 kB in 0s (3844 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4hay1fwa/libffi-dev_3.4.8-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libpcre2-dev arm64 10.45-1 [749 kB] Fetched 749 kB in 0s (30.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4tpwja_m/libpcre2-dev_10.45-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libkrb5support0 arm64 1.21.3-5 [32.4 kB] Fetched 32.4 kB in 0s (1680 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpivw15uhw/libkrb5support0_1.21.3-5_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libsqlite3-0 arm64 3.46.1-3 [852 kB] Fetched 852 kB in 0s (34.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp07a3t32o/libsqlite3-0_3.46.1-3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 sensible-utils all 0.0.25 [25.0 kB] Fetched 25.0 kB in 0s (1439 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl_gpi8v4/sensible-utils_0.0.25_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 dbus-user-session arm64 1.16.2-2 [52.1 kB] Fetched 52.1 kB in 0s (3100 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjxdt6b_g/dbus-user-session_1.16.2-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libselinux1 arm64 3.8.1-1 [79.4 kB] Fetched 79.4 kB in 0s (4557 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfu7tj0yb/libselinux1_3.8.1-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libisl23 arm64 0.27-1 [601 kB] Fetched 601 kB in 0s (28.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnkbhrdco/libisl23_0.27-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libgssrpc4t64 arm64 1.21.3-5 [57.2 kB] Fetched 57.2 kB in 0s (3360 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgrdk7vxq/libgssrpc4t64_1.21.3-5_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libtexlua53-5 arm64 2024.20240313.70630+ds-6 [106 kB] Fetched 106 kB in 0s (6020 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdaj2r6cw/libtexlua53-5_2024.20240313.70630+ds-6_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 mount arm64 2.41-4 [161 kB] Fetched 161 kB in 0s (8858 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpa3k9_6jw/mount_2.41-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 python3.13-minimal arm64 3.13.3-2 [1998 kB] Fetched 1998 kB in 0s (60.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxuz30t4b/python3.13-minimal_3.13.3-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 dwz arm64 0.15-1+b1 [102 kB] Fetched 102 kB in 0s (5818 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbod3r7mp/dwz_0.15-1+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libcommons-parent-java all 56-1 [10.8 kB] Fetched 10.8 kB in 0s (615 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnn97m2ag/libcommons-parent-java_56-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libxcb-glx0 arm64 1.17.0-2+b1 [123 kB] Fetched 123 kB in 0s (6703 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0yt_6mij/libxcb-glx0_1.17.0-2+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libgdk-pixbuf2.0-common all 2.42.12+dfsg-2 [311 kB] Fetched 311 kB in 0s (15.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnicux8af/libgdk-pixbuf2.0-common_2.42.12+dfsg-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libdpkg-perl all 1.22.18 [649 kB] Fetched 649 kB in 0s (29.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl6i8b520/libdpkg-perl_1.22.18_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libxcb-xfixes0 arm64 1.17.0-2+b1 [110 kB] Fetched 110 kB in 0s (6466 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpiry8y1z3/libxcb-xfixes0_1.17.0-2+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libxcb-present0 arm64 1.17.0-2+b1 [106 kB] Fetched 106 kB in 0s (5554 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpe3xbn92h/libxcb-present0_1.17.0-2+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libx11-xcb1 arm64 2:1.8.12-1 [247 kB] Fetched 247 kB in 0s (11.9 MB/s) dpkg-name: info: moved 'libx11-xcb1_2%3a1.8.12-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpa984f4fw/libx11-xcb1_1.8.12-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libgnutls-openssl27t64 arm64 3.8.9-2 [452 kB] Fetched 452 kB in 0s (25.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwdda15uc/libgnutls-openssl27t64_3.8.9-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libxtst6 arm64 2:1.2.5-1 [25.7 kB] Fetched 25.7 kB in 0s (1555 kB/s) dpkg-name: info: moved 'libxtst6_2%3a1.2.5-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpemk6zucf/libxtst6_1.2.5-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libdebconfclient0 arm64 0.278 [10.6 kB] Fetched 10.6 kB in 0s (645 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpap6rtwr9/libdebconfclient0_0.278_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libmime-charset-perl all 1.013.1-2 [34.0 kB] Fetched 34.0 kB in 0s (2037 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxsbxrvip/libmime-charset-perl_1.013.1-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libsharpyuv-dev arm64 1.5.0-0.1 [118 kB] Fetched 118 kB in 0s (6611 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6doscqp7/libsharpyuv-dev_1.5.0-0.1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libx11-6 arm64 2:1.8.12-1 [795 kB] Fetched 795 kB in 0s (34.0 MB/s) dpkg-name: info: moved 'libx11-6_2%3a1.8.12-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpep15o4zt/libx11-6_1.8.12-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 xkb-data all 2.42-1 [790 kB] Fetched 790 kB in 0s (34.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9h0w0t2v/xkb-data_2.42-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libtirpc-common all 1.3.6+ds-1 [11.0 kB] Fetched 11.0 kB in 0s (673 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1yjlqo4g/libtirpc-common_1.3.6+ds-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libmpc3 arm64 1.3.1-1+b3 [50.5 kB] Fetched 50.5 kB in 0s (2621 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt8p2a_fb/libmpc3_1.3.1-1+b3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 hicolor-icon-theme all 0.18-2 [11.8 kB] Fetched 11.8 kB in 0s (712 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx7jj6c51/hicolor-icon-theme_0.18-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libicu-dev arm64 76.1-3 [10.6 MB] Fetched 10.6 MB in 0s (117 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj015cn24/libicu-dev_76.1-3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 build-essential arm64 12.12 [4624 B] Fetched 4624 B in 0s (280 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvlf9rtm0/build-essential_12.12_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libmpfi0 arm64 1.5.4+ds-4 [34.5 kB] Fetched 34.5 kB in 0s (1976 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcxlz3gr2/libmpfi0_1.5.4+ds-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libctf0 arm64 2.44-3 [84.2 kB] Fetched 84.2 kB in 0s (4542 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjy1jkclm/libctf0_2.44-3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libvulkan1 arm64 1.4.309.0-1 [127 kB] Fetched 127 kB in 0s (10.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbpkobytw/libvulkan1_1.4.309.0-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libcap-ng0 arm64 0.8.5-4+b1 [17.0 kB] Fetched 17.0 kB in 0s (1033 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps3gslqew/libcap-ng0_0.8.5-4+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libp11-kit0 arm64 0.25.5-3 [409 kB] Fetched 409 kB in 0s (20.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2z13rg0d/libp11-kit0_0.25.5-3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libapparmor1 arm64 4.1.0-1 [42.9 kB] Fetched 42.9 kB in 0s (2279 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpak7y7ta3/libapparmor1_4.1.0-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 xfonts-encodings all 1:1.0.4-2.2 [577 kB] Fetched 577 kB in 0s (16.1 MB/s) dpkg-name: info: moved 'xfonts-encodings_1%3a1.0.4-2.2_all.deb' to '/srv/rebuilderd/tmp/tmpup_30idw/xfonts-encodings_1.0.4-2.2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libfontconfig1-dev arm64 2.15.0-2.3 [269 kB] Fetched 269 kB in 0s (13.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplykk3_ug/libfontconfig1-dev_2.15.0-2.3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libgmp10 arm64 2:6.3.0+dfsg-3 [535 kB] Fetched 535 kB in 0s (24.4 MB/s) dpkg-name: info: moved 'libgmp10_2%3a6.3.0+dfsg-3_arm64.deb' to '/srv/rebuilderd/tmp/tmp5hxgrpzd/libgmp10_6.3.0+dfsg-3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 texlive-plain-generic all 2024.20250309-2 [29.0 MB] Fetched 29.0 MB in 0s (183 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu3tbc03p/texlive-plain-generic_2024.20250309-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libtiff6 arm64 4.7.0-3 [325 kB] Fetched 325 kB in 0s (16.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo483l18d/libtiff6_4.7.0-3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libpkgconf3 arm64 1.8.1-4 [35.3 kB] Fetched 35.3 kB in 0s (2143 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdh_rzf8q/libpkgconf3_1.8.1-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libfribidi0 arm64 1.0.16-1 [26.5 kB] Fetched 26.5 kB in 0s (1584 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsgy_smd5/libfribidi0_1.0.16-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libwebpmux3 arm64 1.5.0-0.1 [125 kB] Fetched 125 kB in 0s (6971 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpf4ao5f0r/libwebpmux3_1.5.0-0.1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libdconf1 arm64 0.40.0-5 [40.4 kB] Fetched 40.4 kB in 0s (2415 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjkeyd75f/libdconf1_0.40.0-5_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libx11-data all 2:1.8.12-1 [343 kB] Fetched 343 kB in 0s (17.6 MB/s) dpkg-name: info: moved 'libx11-data_2%3a1.8.12-1_all.deb' to '/srv/rebuilderd/tmp/tmp7uzf4kfc/libx11-data_1.8.12-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libthai-dev arm64 0.1.29-2+b1 [24.0 kB] Fetched 24.0 kB in 0s (1447 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9ja82hpw/libthai-dev_0.1.29-2+b1_arm64.deb' Downloading dependency 384 of 521: libfile-stripnondeterminism-perl:arm64=1.14.1-2 Downloading dependency 385 of 521: libpam-runtime:arm64=1.7.0-3 Downloading dependency 386 of 521: libglib2.0-bin:arm64=2.84.1-2 Downloading dependency 387 of 521: libwebpdemux2:arm64=1.5.0-0.1 Downloading dependency 388 of 521: tcl8.6:arm64=8.6.16+dfsg-1 Downloading dependency 389 of 521: po-debconf:arm64=1.0.21+nmu1 Downloading dependency 390 of 521: libdb5.3t64:arm64=5.3.28+dfsg2-9 Downloading dependency 391 of 521: patch:arm64=2.8-1 Downloading dependency 392 of 521: libitm1:arm64=14.2.0-19 Downloading dependency 393 of 521: libharfbuzz-icu0:arm64=10.2.0-1+b1 Downloading dependency 394 of 521: libxmuu1:arm64=2:1.1.3-3+b4 Downloading dependency 395 of 521: libharfbuzz-dev:arm64=10.2.0-1+b1 Downloading dependency 396 of 521: libcolord2:arm64=1.4.7-3 Downloading dependency 397 of 521: pkgconf-bin:arm64=1.8.1-4 Downloading dependency 398 of 521: libxcb-render0-dev:arm64=1.17.0-2+b1 Downloading dependency 399 of 521: tzdata:arm64=2025b-2 Downloading dependency 400 of 521: libncursesw6:arm64=6.5+20250216-2 Downloading dependency 401 of 521: liblapack-dev:arm64=3.12.1-2 Downloading dependency 402 of 521: gcc-14-base:arm64=14.2.0-19 Downloading dependency 403 of 521: libzzip-0-13t64:arm64=0.13.78+dfsg.1-0.1 Downloading dependency 404 of 521: libsharpyuv0:arm64=1.5.0-0.1 Downloading dependency 405 of 521: libatk-bridge2.0-0t64:arm64=2.56.2-1 Downloading dependency 406 of 521: libpam-systemd:arm64=257.5-2 Downloading dependency 407 of 521: libattr1:arm64=1:2.5.2-3 Downloading dependency 408 of 521: ucf:arm64=3.0051 Downloading dependency 409 of 521: lmodern:arm64=2.005-1 Downloading dependency 410 of 521: libpcre2-posix3:arm64=10.45-1 Downloading dependency 411 of 521: autoconf:arm64=2.72-3.1 Downloading dependency 412 of 521: t1utils:arm64=1.41-4+b1 Downloading dependency 413 of 521: libmagic-mgc:arm64=1:5.46-5 Downloading dependency 414 of 521: python3-packaging:arm64=25.0-1 Downloading dependency 415 of 521: perl-base:arm64=5.40.1-3 Downloading dependency 416 of 521: libkadm5clnt-mit12:arm64=1.21.3-5 Downloading dependency 417 of 521: liblzo2-2:arm64=2.10-3+b1 Downloading dependency 418 of 521: libgdk-pixbuf-2.0-0:arm64=2.42.12+dfsg-2 Downloading dependency 419 of 521: libxrender-dev:arm64=1:0.9.12-1 Downloading 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dependency 497 of 521: libp11-kit0:arm64=0.25.5-3 Downloading dependency 498 of 521: libapparmor1:arm64=4.1.0-1 Downloading dependency 499 of 521: xfonts-encodings:arm64=1:1.0.4-2.2 Downloading dependency 500 of 521: libfontconfig1-dev:arm64=2.15.0-2.3 Downloading dependency 501 of 521: libgmp10:arm64=2:6.3.0+dfsg-3 Downloading dependency 502 of 521: texlive-plain-generic:arm64=2024.20250309-2 Downloading dependency 503 of 521: libtiff6:arm64=4.7.0-3 Downloading dependency 504 of 521: libpkgconf3:arm64=1.8.1-4 Downloading dependency 505 of 521: libfribidi0:arm64=1.0.16-1 Downloading dependency 506 of 521: libwebpmux3:arm64=1.5.0-0.1 Downloading dependency 507 of 521: libdconf1:arm64=0.40.0-5 Downloading dependency 508 of 521: libx11-data:arm64=2:1.8.12-1 Downloading dependency 509 of 521: libthai-dev:arm64=0.1.29-2+b1 Downloading dependency 510 of 521: libxau6:arm64=1:1.0.11-1Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libxau6 arm64 1:1.0.11-1 [20.6 kB] Fetched 20.6 kB in 0s (1235 kB/s) dpkg-name: info: moved 'libxau6_1%3a1.0.11-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpo1kvaahy/libxau6_1.0.11-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 texinfo-lib arm64 7.1.1-1+b1 [220 kB] Fetched 220 kB in 0s (19.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy9imhtxs/texinfo-lib_7.1.1-1+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 cpp arm64 4:14.2.0-1 [1568 B] Fetched 1568 B in 0s (92.2 kB/s) dpkg-name: info: moved 'cpp_4%3a14.2.0-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpts9mixgy/cpp_14.2.0-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libpixman-1-dev arm64 0.44.0-3 [11.4 kB] Fetched 11.4 kB in 0s (677 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1swmfso3/libpixman-1-dev_0.44.0-3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libpam0g arm64 1.7.0-3 [68.6 kB] Fetched 68.6 kB in 0s (3984 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4ws03c42/libpam0g_1.7.0-3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 openjdk-21-jre-headless arm64 21.0.7+6-1 [40.6 MB] Fetched 40.6 MB in 0s (164 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpijx27hq2/openjdk-21-jre-headless_21.0.7+6-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libwebpdecoder3 arm64 1.5.0-0.1 [182 kB] Fetched 182 kB in 0s (10.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0n1u2o9h/libwebpdecoder3_1.5.0-0.1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libxft2 arm64 2.3.6-1+b4 [51.6 kB] Fetched 51.6 kB in 0s (3115 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkhpfphpo/libxft2_2.3.6-1+b4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libctf-nobfd0 arm64 2.44-3 [152 kB] Fetched 152 kB in 0s (8121 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6a1e8log/libctf-nobfd0_2.44-3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 hostname arm64 3.25 [10.8 kB] Fetched 10.8 kB in 0s (642 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn55dpcae/hostname_3.25_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 libxkbfile1 arm64 1:1.1.0-1+b4 [72.4 kB] Fetched 72.4 kB in 0s (4049 kB/s) dpkg-name: info: moved 'libxkbfile1_1%3a1.1.0-1+b4_arm64.deb' to '/srv/rebuilderd/tmp/tmptb3x_h9p/libxkbfile1_1.1.0-1+b4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main arm64 liblerc4 arm64 4.0.0+ds-5 [146 kB] Fetched 146 kB in 0s (8148 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp64fazxd5/liblerc4_4.0.0+ds-5_arm64.deb' dpkg-buildpackage: info: source package debootsnap-dummy dpkg-buildpackage: info: source version 1.0 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Equivs Dummy Package Generator dpkg-buildpackage: info: host architecture arm64 dpkg-source --before-build . debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/debootsnap-dummy/ dh_install dh_installdocs dh_installchangelogs dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'debootsnap-dummy' in '../debootsnap-dummy_1.0_all.deb'. dpkg-genbuildinfo --build=binary -O../debootsnap-dummy_1.0_arm64.buildinfo dpkg-genchanges --build=binary -O../debootsnap-dummy_1.0_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) The package has been created. Attention, the package has been created in the /srv/rebuilderd/tmp/tmpj8d4ir1x/cache directory, not in ".." as indicated by the message above! I: automatically chosen mode: unshare I: chroot architecture arm64 is equal to the host's architecture I: using /srv/rebuilderd/tmp/mmdebstrap.mrWmXABZuT as tempdir I: running --setup-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/setup00.sh /srv/rebuilderd/tmp/mmdebstrap.mrWmXABZuT 127.0.0.1 - - [21/Jul/2025 16:19:40] code 404, message File not found 127.0.0.1 - - [21/Jul/2025 16:19:40] "GET /./InRelease HTTP/1.1" 404 - Ign:1 http://localhost:40243 ./ InRelease 127.0.0.1 - - [21/Jul/2025 16:19:40] "GET /./Release HTTP/1.1" 200 - Get:2 http://localhost:40243 ./ Release [462 B] 127.0.0.1 - - [21/Jul/2025 16:19:40] code 404, message File not found 127.0.0.1 - - [21/Jul/2025 16:19:40] "GET /./Release.gpg HTTP/1.1" 404 - Ign:3 http://localhost:40243 ./ Release.gpg 127.0.0.1 - - [21/Jul/2025 16:19:40] "GET /./Packages HTTP/1.1" 200 - Get:4 http://localhost:40243 ./ Packages [812 kB] Fetched 812 kB in 0s (18.8 MB/s) Reading package lists... usr-is-merged found but not real -- not running merged-usr setup hook I: skipping apt-get update because it was already run I: downloading packages with apt... 127.0.0.1 - 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- [21/Jul/2025 16:19:41] "GET /./ncurses-base_6.5%2b20250216-2_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:19:41] "GET /./sysvinit-utils_3.14-4_arm64.deb HTTP/1.1" 200 - I: extracting archives... I: running --extract-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/extract00.sh /srv/rebuilderd/tmp/mmdebstrap.mrWmXABZuT 127.0.0.1 - - [21/Jul/2025 16:19:44] code 404, message File not found 127.0.0.1 - - [21/Jul/2025 16:19:44] "GET /./InRelease HTTP/1.1" 404 - Ign:1 http://localhost:40243 ./ InRelease 127.0.0.1 - - [21/Jul/2025 16:19:44] "GET /./Release HTTP/1.1" 304 - Hit:2 http://localhost:40243 ./ Release 127.0.0.1 - - [21/Jul/2025 16:19:44] code 404, message File not found 127.0.0.1 - - [21/Jul/2025 16:19:44] "GET /./Release.gpg HTTP/1.1" 404 - Ign:3 http://localhost:40243 ./ Release.gpg Reading package lists... usr-is-merged found but not real -- not running merged-usr extract hook I: installing essential packages... 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Building dependency tree... Reading state information... libglvnd0 is already the newest version (1.7.0-1+b2). libglvnd0 set to manually installed. procps is already the newest version (2:4.0.4-8). procps set to manually installed. libmpfr6 is already the newest version (4.2.2-1). libmpfr6 set to manually installed. libldap2 is already the newest version (2.6.9+dfsg-2). libldap2 set to manually installed. xvfb is already the newest version (2:21.1.16-1). xvfb set to manually installed. fonts-dejavu-mono is already the newest version (2.37-8). fonts-dejavu-mono set to manually installed. libhogweed6t64 is already the newest version (3.10.1-1). libhogweed6t64 set to manually installed. libxext6 is already the newest version (2:1.3.4-1+b3). libxext6 set to manually installed. libssl-dev is already the newest version (3.5.0-1). libssl-dev set to manually installed. bsdextrautils is already the newest version (2.41-4). bsdextrautils set to manually installed. librtmp-dev is already the newest version (2.4+20151223.gitfa8646d.1-2+b5). librtmp-dev set to manually installed. libmagic1t64 is already the newest version (1:5.46-5). libmagic1t64 set to manually installed. x11proto-dev is already the newest version (2024.1-1). x11proto-dev set to manually installed. libxss-dev is already the newest version (1:1.2.3-1+b3). libxss-dev set to manually installed. libxfixes3 is already the newest version (1:6.0.0-2+b4). libxfixes3 set to manually installed. libgcc-14-dev is already the newest version (14.2.0-19). libgcc-14-dev set to manually installed. libdatrie1 is already the newest version (0.2.13-3+b1). libdatrie1 set to manually installed. fontconfig is already the newest version (2.15.0-2.3). fontconfig set to manually installed. gir1.2-harfbuzz-0.0 is already the newest version (10.2.0-1+b1). gir1.2-harfbuzz-0.0 set to manually installed. sysvinit-utils is already the newest version (3.14-4). liblsan0 is already the newest version (14.2.0-19). liblsan0 set to manually installed. libsasl2-modules-db is already the newest version (2.1.28+dfsg1-9). libsasl2-modules-db set to manually installed. libxml-sax-base-perl is already the newest version (1.09-3). libxml-sax-base-perl set to manually installed. grep is already the newest version (3.11-4+b1). libpixman-1-0 is already the newest version (0.44.0-3). libpixman-1-0 set to manually installed. g++-14-aarch64-linux-gnu is already the newest version (14.2.0-19). g++-14-aarch64-linux-gnu set to manually installed. libxcursor1 is already the newest version (1:1.2.3-1). libxcursor1 set to manually installed. systemd is already the newest version (257.5-2). systemd set to manually installed. binutils is already the newest version (2.44-3). binutils set to manually installed. libgomp1 is already the newest version (14.2.0-19). libgomp1 set to manually installed. libdrm-amdgpu1 is already the newest version (2.4.124-2). libdrm-amdgpu1 set to manually installed. libapache-pom-java is already the newest version (33-2). libapache-pom-java set to manually installed. libdbus-1-3 is already the newest version (1.16.2-2). libdbus-1-3 set to manually installed. libdrm2 is already the newest version (2.4.124-2). libdrm2 set to manually installed. libkeyutils1 is already the newest version (1.6.3-6). libkeyutils1 set to manually installed. libkdb5-10t64 is already the newest version (1.21.3-5). libkdb5-10t64 set to manually installed. libxdmcp6 is already the newest version (1:1.1.5-1). libxdmcp6 set to manually installed. ncurses-bin is already the newest version (6.5+20250216-2). libglib2.0-dev is already the newest version (2.84.1-2). libglib2.0-dev set to manually installed. libxml-namespacesupport-perl is already the newest version (1.12-2). libxml-namespacesupport-perl set to manually installed. libgfortran-14-dev is already the newest version (14.2.0-19). libgfortran-14-dev set to manually installed. libxaw7 is already the newest version (2:1.0.16-1). libxaw7 set to manually installed. libpython3.13-stdlib is already the newest version (3.13.3-2). libpython3.13-stdlib set to manually installed. dbus-bin is already the newest version (1.16.2-2). dbus-bin set to manually installed. libssl3t64 is already the newest version (3.5.0-1). libarchive-zip-perl is already the newest version (1.68-1). libarchive-zip-perl set to manually installed. libseccomp2 is already the newest version (2.6.0-2). libseccomp2 set to manually installed. libjansson4 is already the newest version (2.14-2+b3). libjansson4 set to manually installed. libtool is already the newest version (2.5.4-4). libtool set to manually installed. fonts-lmodern is already the newest version (2.005-1). fonts-lmodern set to manually installed. zlib1g is already the newest version (1:1.3.dfsg+really1.3.1-1+b1). libxau-dev is already the newest version (1:1.0.11-1). libxau-dev set to manually installed. libkrb5-dev is already the newest version (1.21.3-5). libkrb5-dev set to manually installed. libcap2 is already the newest version (1:2.75-7). gcc-14 is already the newest version (14.2.0-19). gcc-14 set to manually installed. systemd-sysv is already the newest version (257.5-2). systemd-sysv set to manually installed. texinfo is already the newest version (7.1.1-1). texinfo set to manually installed. libelf1t64 is already the newest version (0.192-4). libelf1t64 set to manually installed. comerr-dev is already the newest version (2.1-1.47.2-1+b1). comerr-dev set to manually installed. libpam-modules-bin is already the newest version (1.7.0-3). libkadm5srv-mit12 is already the newest version (1.21.3-5). libkadm5srv-mit12 set to manually installed. tex-common is already the newest version (6.19). tex-common set to manually installed. libgnutls30t64 is already the newest version (3.8.9-2). libgnutls30t64 set to manually installed. rpcsvc-proto is already the newest version (1.4.3-1+b1). rpcsvc-proto set to manually installed. libepoxy0 is already the newest version (1.5.10-2). libepoxy0 set to 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installed. libgif7 is already the newest version (5.2.2-1+b1). libgif7 set to manually installed. libavahi-common3 is already the newest version (0.8-16). libavahi-common3 set to manually installed. media-types is already the newest version (13.0.0). media-types set to manually installed. libpangocairo-1.0-0 is already the newest version (1.56.3-1). libpangocairo-1.0-0 set to manually installed. libuchardet0 is already the newest version (0.0.8-1+b2). libuchardet0 set to manually installed. libgio-2.0-dev-bin is already the newest version (2.84.1-2). libgio-2.0-dev-bin set to manually installed. libtasn1-6-dev is already the newest version (4.20.0-2). libtasn1-6-dev set to manually installed. libmount1 is already the newest version (2.41-4). libunistring5 is already the newest version (1.3-2). libunistring5 set to manually installed. man-db is already the newest version (2.13.0-1). man-db set to manually installed. libice6 is already the newest version (2:1.1.1-1). libice6 set to 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libstdc++6 is already the newest version (14.2.0-19). libstdc++6 set to manually installed. libxrandr2 is already the newest version (2:1.5.4-1+b3). libxrandr2 set to manually installed. xauth is already the newest version (1:1.1.2-1.1). xauth set to manually installed. libwayland-cursor0 is already the newest version (1.23.1-3). libwayland-cursor0 set to manually installed. libpcre2-32-0 is already the newest version (10.45-1). libpcre2-32-0 set to manually installed. file is already the newest version (1:5.46-5). file set to manually installed. libxml-sax-perl is already the newest version (1.02+dfsg-4). libxml-sax-perl set to manually installed. libxmu6 is already the newest version (2:1.1.3-3+b4). libxmu6 set to manually installed. libfile-which-perl is already the newest version (1.27-2). libfile-which-perl set to manually installed. libllvm19 is already the newest version (1:19.1.7-3). libllvm19 set to manually installed. libselinux1-dev is already the newest version (3.8.1-1). libselinux1-dev set to manually installed. libcairo-script-interpreter2 is already the newest version (1.18.4-1+b1). libcairo-script-interpreter2 set to manually installed. java-common is already the newest version (0.76). java-common set to manually installed. libgio-2.0-dev is already the newest version (2.84.1-2). libgio-2.0-dev set to manually installed. libharfbuzz-gobject0 is already the newest version (10.2.0-1+b1). libharfbuzz-gobject0 set to manually installed. cpp-14-aarch64-linux-gnu is already the newest version (14.2.0-19). cpp-14-aarch64-linux-gnu set to manually installed. bzip2 is already the newest version (1.0.8-6). bzip2 set to manually installed. libglx-mesa0 is already the newest version (25.0.4-1). libglx-mesa0 set to manually installed. texlive-extra-utils is already the newest version (2024.20250309-2). texlive-extra-utils set to manually installed. bash is already the newest version (5.2.37-2). intltool-debian is already the newest version (0.35.0+20060710.6). intltool-debian set to manually installed. dbus is already the newest version (1.16.2-2). dbus set to manually installed. libjs-jquery is already the newest version (3.6.1+dfsg+~3.5.14-1). libjs-jquery set to manually installed. libmd0 is already the newest version (1.1.0-2+b1). xfonts-base is already the newest version (1:1.0.5+nmu1). xfonts-base set to manually installed. libk5crypto3 is already the newest version (1.21.3-5). libk5crypto3 set to manually installed. libkrb5-3 is already the newest version (1.21.3-5). libkrb5-3 set to manually installed. gfortran-14-aarch64-linux-gnu is already the newest version (14.2.0-19). gfortran-14-aarch64-linux-gnu set to manually installed. libnghttp2-14 is already the newest version (1.64.0-1.1). libnghttp2-14 set to manually installed. libteckit0 is already the newest version (2.5.12+ds1-1+b1). libteckit0 set to manually installed. libacl1 is already the newest version (2.3.2-2+b1). perl-modules-5.40 is already the newest version (5.40.1-3). perl-modules-5.40 set to manually installed. libxcb1 is already the newest version (1.17.0-2+b1). libxcb1 set to manually installed. native-architecture is already the newest version (0.2.6). native-architecture set to manually installed. fontconfig-config is already the newest version (2.15.0-2.3). fontconfig-config set to manually installed. libpaper2 is already the newest version (2.2.5-0.3+b2). libpaper2 set to manually installed. libpam-modules is already the newest version (1.7.0-3). libcloudproviders0 is already the newest version (0.3.6-2). libcloudproviders0 set to manually installed. libnss3 is already the newest version (2:3.110-1). libnss3 set to manually installed. libpcre2-16-0 is already the newest version (10.45-1). libpcre2-16-0 set to manually installed. ncurses-base is already the newest version (6.5+20250216-2). xserver-common is already the newest version (2:21.1.16-1). xserver-common set to manually installed. gcc-14-aarch64-linux-gnu is already the newest version (14.2.0-19). gcc-14-aarch64-linux-gnu set to manually installed. libharfbuzz-cairo0 is already the newest version (10.2.0-1+b1). libharfbuzz-cairo0 set to manually installed. libpango-1.0-0 is already the newest version (1.56.3-1). libpango-1.0-0 set to manually installed. libpotrace0 is already the newest version (1.16-2+b2). libpotrace0 set to manually installed. init-system-helpers is already the newest version (1.68). python3 is already the newest version (3.13.3-1). python3 set to manually installed. dbus-daemon is already the newest version (1.16.2-2). dbus-daemon set to manually installed. libcrypt-dev is already the newest version (1:4.4.38-1). libcrypt-dev set to manually installed. libsensors5 is already the newest version (1:3.6.2-2). libsensors5 set to manually installed. libuuid1 is already the newest version (2.41-4). libnghttp3-dev is already the newest version (1.8.0-1). libnghttp3-dev set to manually installed. libatk1.0-0t64 is already the newest version (2.56.2-1). libatk1.0-0t64 set to manually installed. libgnutls-dane0t64 is already the newest version (3.8.9-2). libgnutls-dane0t64 set to manually installed. libxss1 is already the newest version (1:1.2.3-1+b3). libxss1 set to manually installed. gfortran-aarch64-linux-gnu is already the newest version (4:14.2.0-1). gfortran-aarch64-linux-gnu set to manually installed. libavahi-common-data is already the newest version (0.8-16). libavahi-common-data set to manually installed. libpango1.0-dev is already the newest version (1.56.3-1). libpango1.0-dev set to manually installed. openssl-provider-legacy is already the newest version (3.5.0-1). g++-14 is already the newest version (14.2.0-19). g++-14 set to manually installed. gir1.2-pango-1.0 is already the newest version (1.56.3-1). gir1.2-pango-1.0 set to manually installed. cpp-14 is already the newest version (14.2.0-19). cpp-14 set to manually installed. libsystemd0 is already the newest version (257.5-2). dpkg-dev is already the newest version (1.22.18). dpkg-dev set to manually installed. libgraphite2-3 is already the newest version (1.3.14-2+b1). libgraphite2-3 set to manually installed. dconf-service is already the newest version (0.40.0-5). dconf-service set to manually installed. icu-devtools is already the newest version (76.1-3). icu-devtools set to manually installed. gir1.2-freedesktop is already the newest version (1.84.0-1). gir1.2-freedesktop set to manually installed. xorg-sgml-doctools is already the newest version (1:1.11-1.1). xorg-sgml-doctools set to manually installed. openjdk-21-jre is already the newest version (21.0.7+6-1). openjdk-21-jre set to manually installed. libldap-dev is already the newest version (2.6.9+dfsg-2). libldap-dev set to manually installed. make is already the newest version (4.4.1-2). make set to manually installed. libglib2.0-data is already the newest version (2.84.1-2). libglib2.0-data set to manually installed. libfontconfig-dev is already the newest version (2.15.0-2.3). libfontconfig-dev set to manually installed. libunicode-linebreak-perl is already the newest version (0.0.20190101-1+b8). libunicode-linebreak-perl set to manually installed. libbz2-dev is already the newest version (1.0.8-6). libbz2-dev set to manually installed. libbrotli-dev is already the newest version (1.1.0-2+b7). libbrotli-dev set to manually installed. sed is already the newest version (4.9-2+b1). at-spi2-common is already the newest version (2.56.2-1). at-spi2-common set to manually installed. mesa-libgallium is already the newest version (25.0.4-1). mesa-libgallium set to manually installed. libsasl2-2 is already the newest version (2.1.28+dfsg1-9). libsasl2-2 set to manually installed. tk8.6 is already the newest version (8.6.16-1). tk8.6 set to manually installed. base-files is already the newest version (13.7). tk8.6-dev is already the newest version (8.6.16-1). tk8.6-dev set to manually installed. automake is already the newest version (1:1.17-4). automake set to manually installed. dh-strip-nondeterminism is already the newest version (1.14.1-2). dh-strip-nondeterminism set to manually installed. libcairo2-dev is already the newest version (1.18.4-1+b1). libcairo2-dev set to manually installed. libjpeg-dev is already the newest version (1:2.1.5-3.1). libjpeg-dev set to manually installed. xz-utils is already the newest version (5.8.1-1). xz-utils set to manually installed. libjpeg62-turbo-dev is already the newest version (1:2.1.5-3.1). libjpeg62-turbo-dev set to manually installed. libxcb1-dev is already the newest version (1.17.0-2+b1). libxcb1-dev set to manually installed. libc-bin is already the newest version (2.41-7). libssh2-1-dev is already the newest version (1.11.1-1). libssh2-1-dev set to manually installed. krb5-multidev is already the newest version (1.21.3-5). krb5-multidev set to manually installed. libc6-dev is already the newest version (2.41-7). libc6-dev set to manually installed. gtk-update-icon-cache is already the newest 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installed. libsepol-dev is already the newest version (3.8.1-1). libsepol-dev set to manually installed. libz3-4 is already the newest version (4.13.3-1). libz3-4 set to manually installed. bsdutils is already the newest version (1:2.41-4). libglib2.0-dev-bin is already the newest version (2.84.1-2). libglib2.0-dev-bin set to manually installed. libunbound8 is already the newest version (1.22.0-1+b1). libunbound8 set to manually installed. libtirpc-dev is already the newest version (1.3.6+ds-1). libtirpc-dev set to manually installed. libxml-libxml-perl is already the newest version (2.0207+dfsg+really+2.0134-5+b2). libxml-libxml-perl set to manually installed. libxxf86vm1 is already the newest version (1:1.1.4-1+b4). libxxf86vm1 set to manually installed. libaudit1 is already the newest version (1:4.0.2-2+b2). tar is already the newest version (1.35+dfsg-3.1). libtiff-dev is already the newest version (4.7.0-3). libtiff-dev set to manually installed. libcc1-0 is already the newest version (14.2.0-19). libcc1-0 set to manually installed. libasound2-data is already the newest version (1.2.14-1). libasound2-data set to manually installed. cpp-aarch64-linux-gnu is already the newest version (4:14.2.0-1). cpp-aarch64-linux-gnu set to manually installed. libxinerama1 is already the newest version (2:1.1.4-3+b4). libxinerama1 set to manually installed. libhwasan0 is already the newest version (14.2.0-19). libhwasan0 set to manually installed. libdrm-common is already the newest version (2.4.124-2). libdrm-common set to manually installed. autotools-dev is already the newest version (20240727.1). autotools-dev set to manually installed. libgssapi-krb5-2 is already the newest version (1.21.3-5). libgssapi-krb5-2 set to manually installed. libtext-unidecode-perl is already the newest version (1.30-3). libtext-unidecode-perl set to manually installed. mawk is already the newest version (1.3.4.20250131-1). libdatrie-dev is already the newest version (0.2.13-3+b1). libdatrie-dev set to manually installed. python3-minimal is already the newest version (3.13.3-1). python3-minimal set to manually installed. texlive-fonts-extra is already the newest version (2024.20250309-2). texlive-fonts-extra set to manually installed. libxdmcp-dev is already the newest version (1:1.1.5-1). libxdmcp-dev set to manually installed. libdebhelper-perl is already the newest version (13.24.2). libdebhelper-perl set to manually installed. libblkid1 is already the newest version (2.41-4). libfreetype6 is already the newest version (2.13.3+dfsg-1). libfreetype6 set to manually installed. libxft-dev is already the newest version (2.3.6-1+b4). libxft-dev set to manually installed. dconf-gsettings-backend is already the newest version (0.40.0-5). dconf-gsettings-backend set to manually installed. findutils is already the newest version (4.10.0-3). libtirpc3t64 is already the newest version (1.3.6+ds-1). libtirpc3t64 set to manually installed. libyaml-tiny-perl is already the 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the newest version (4:14.2.0-1). gfortran set to manually installed. libedit2 is already the newest version (3.1-20250104-1). libedit2 set to manually installed. binutils-common is already the newest version (2.44-3). binutils-common set to manually installed. preview-latex-style is already the newest version (13.2-1). preview-latex-style set to manually installed. liblapack3 is already the newest version (3.12.1-2). liblapack3 set to manually installed. libglib2.0-0t64 is already the newest version (2.84.1-2). libglib2.0-0t64 set to manually installed. libpipeline1 is already the newest version (1.5.8-1). libpipeline1 set to manually installed. libudev1 is already the newest version (257.5-2). netbase is already the newest version (6.5). netbase set to manually installed. libbrotli1 is already the newest version (1.1.0-2+b7). libbrotli1 set to manually installed. libtinfo6 is already the newest version (6.5+20250216-2). texlive-latex-extra is already the newest version (2024.20250309-2). texlive-latex-extra set to manually installed. libjbig0 is already the newest version (2.1-6.1+b2). libjbig0 set to manually installed. libgfortran5 is already the newest version (14.2.0-19). libgfortran5 set to manually installed. libxpm4 is already the newest version (1:3.5.17-1+b3). libxpm4 set to manually installed. libxt-dev is already the newest version (1:1.2.1-1.2+b2). libxt-dev set to manually installed. libx11-dev is already the newest version (2:1.8.12-1). libx11-dev set to manually installed. libsframe1 is already the newest version (2.44-3). libsframe1 set to manually installed. xdg-utils is already the newest version (1.2.1-2). xdg-utils set to manually installed. libreadline8t64 is already the newest version (8.2-6). libreadline8t64 set to manually installed. coreutils is already the newest version (9.7-2). debconf is already the newest version (1.5.91). libbz2-1.0 is already the newest version (1.0.8-6). libgdbm-compat4t64 is already the newest version (1.24-2). libgdbm-compat4t64 set to manually installed. libxcb-shm0 is already the newest version (1.17.0-2+b1). libxcb-shm0 set to manually installed. x11-common is already the newest version (1:7.7+24). x11-common set to manually installed. libpaper-utils is already the newest version (2.2.5-0.3+b2). libpaper-utils set to manually installed. libcups2t64 is already the newest version (2.4.10-2+b1). libcups2t64 set to manually installed. libpcre2-8-0 is already the newest version (10.45-1). libc-dev-bin is already the newest version (2.41-7). libc-dev-bin set to manually installed. libxdamage1 is already the newest version (1:1.1.6-1+b2). libxdamage1 set to manually installed. libblas-dev is already the newest version (3.12.1-2). libblas-dev set to manually installed. libcurl4t64 is already the newest version (8.13.0-5). libcurl4t64 set to manually installed. libnettle8t64 is already the newest version (3.10.1-1). libnettle8t64 set to manually installed. debhelper is already the newest version (13.24.2). debhelper set to manually installed. libsensors-config is already the newest version (1:3.6.2-2). libsensors-config set to manually installed. gettext is already the newest version (0.23.1-2). gettext set to manually installed. m4 is already the newest version (1.4.19-8). m4 set to manually installed. libncurses6 is already the newest version (6.5+20250216-2). libncurses6 set to manually installed. libptexenc1 is already the newest version (2024.20240313.70630+ds-6). libptexenc1 set to manually installed. libsynctex2 is already the newest version (2024.20240313.70630+ds-6). libsynctex2 set to manually installed. perl is already the newest version (5.40.1-3). perl set to manually installed. gcc is already the newest version (4:14.2.0-1). gcc set to manually installed. libfreetype-dev is already the newest version (2.13.3+dfsg-1). libfreetype-dev set to manually installed. libwebp7 is already the newest version (1.5.0-0.1). libwebp7 set to manually installed. libsepol2 is already the newest version (3.8.1-1). libsepol2 set to manually installed. libp11-kit-dev is already the newest version (0.25.5-3). libp11-kit-dev set to manually installed. libaudit-common is already the newest version (1:4.0.2-2). librtmp1 is already the newest version (2.4+20151223.gitfa8646d.1-2+b5). librtmp1 set to manually installed. libunwind8 is already the newest version (1.8.1-0.1). libunwind8 set to manually installed. libfontconfig1 is already the newest version (2.15.0-2.3). libfontconfig1 set to manually installed. libwebp-dev is already the newest version (1.5.0-0.1). libwebp-dev set to manually installed. openjdk-21-jdk-headless is already the newest version (21.0.7+6-1). openjdk-21-jdk-headless set to manually installed. libxcb-dri3-0 is already the newest version (1.17.0-2+b1). libxcb-dri3-0 set to manually installed. libjpeg62-turbo is already the newest version (1:2.1.5-3.1). libjpeg62-turbo set to manually installed. libnspr4 is already the newest version (2:4.36-1). libnspr4 set to manually installed. libharfbuzz-subset0 is already the newest version (10.2.0-1+b1). libharfbuzz-subset0 set to manually installed. libperl5.40 is already the newest version (5.40.1-3). libperl5.40 set to manually installed. libcrypt1 is already the newest version (1:4.4.38-1). libatomic1 is already the newest version (14.2.0-19). libatomic1 set to manually installed. x11-xkb-utils is already the newest version (7.7+9). x11-xkb-utils set to manually installed. g++-aarch64-linux-gnu is already the newest version (4:14.2.0-1). g++-aarch64-linux-gnu set to manually installed. libglx0 is already the newest version (1.7.0-1+b2). libglx0 set to manually installed. libtk8.6 is already the newest version (8.6.16-1). libtk8.6 set to manually installed. libdeflate-dev is already the newest version (1.23-2). libdeflate-dev set to manually installed. libxrender1 is already the newest version (1:0.9.12-1). libxrender1 set to manually installed. libtiffxx6 is already the newest version (4.7.0-3). libtiffxx6 set to manually installed. libgnutls28-dev is already the newest version (3.8.9-2). libgnutls28-dev set to manually installed. texlive-latex-base is already the newest version (2024.20250309-1). texlive-latex-base set to manually installed. gettext-base is already the newest version (0.23.1-2). gettext-base set to manually installed. libasan8 is already the newest version (14.2.0-19). libasan8 set to manually installed. libblkid-dev is already the newest version (2.41-4). libblkid-dev set to manually installed. libfile-homedir-perl is already the newest version (1.006-2). libfile-homedir-perl set to manually installed. libkpathsea6 is already the newest version (2024.20240313.70630+ds-6). libkpathsea6 set to manually installed. xfonts-utils is already the newest version (1:7.7+7). xfonts-utils set to manually installed. libidn2-0 is already the newest version (2.3.8-2). libidn2-0 set to manually installed. libblas3 is already the newest version (3.12.1-2). libblas3 set to manually installed. gir1.2-freedesktop-dev is already the newest version (1.84.0-1). gir1.2-freedesktop-dev set to manually installed. openjdk-21-jdk is already the newest version (21.0.7+6-1). openjdk-21-jdk set to manually installed. libtext-wrapi18n-perl is already the newest version (0.06-10). libtext-wrapi18n-perl set to manually installed. dbus-session-bus-common is already the newest version (1.16.2-2). dbus-session-bus-common set to manually installed. liblcms2-2 is already the newest version (2.16-2). liblcms2-2 set to manually installed. libssh2-1t64 is already the newest version (1.11.1-1). libssh2-1t64 set to manually installed. libasound2t64 is already the newest version (1.2.14-1). libasound2t64 set to manually installed. python3.13 is already the newest version (3.13.3-2). python3.13 set to manually installed. texlive-luatex is already the newest version (2024.20250309-1). texlive-luatex set to manually installed. libevent-2.1-7t64 is already the newest version (2.1.12-stable-10+b1). libevent-2.1-7t64 set to manually installed. libpython3.13-minimal is already the newest version (3.13.3-2). libpython3.13-minimal set to manually installed. libxshmfence1 is already the newest version (1.3.3-1). libxshmfence1 set to manually installed. gir1.2-glib-2.0 is already the newest version (2.84.1-2). gir1.2-glib-2.0 set to manually installed. libgraphite2-dev is already the newest version (1.3.14-2+b1). libgraphite2-dev set to manually installed. libicu76 is already the newest version (76.1-3). libicu76 set to manually installed. libjbig-dev is already the newest version (2.1-6.1+b2). libjbig-dev set to manually installed. libbinutils is already the newest version (2.44-3). libbinutils set to manually installed. libzstd-dev is already the newest version (1.5.7+dfsg-1). libzstd-dev set to manually installed. libavahi-client3 is already the newest version (0.8-16). libavahi-client3 set to manually installed. libpng-dev is already the newest version (1.6.47-1.1). libpng-dev set to manually installed. dash is already the newest version (0.5.12-12). g++ is already the newest version (4:14.2.0-1). g++ set to manually installed. liblerc-dev is already the newest version (4.0.0+ds-5). liblerc-dev set to manually installed. adwaita-icon-theme is already the newest version (48.0-1). adwaita-icon-theme set to manually installed. libffi8 is already the newest version (3.4.8-2). libffi8 set to manually installed. libice-dev is already the newest version (2:1.1.1-1). libice-dev set to manually installed. libtsan2 is already the newest version (14.2.0-19). libtsan2 set to manually installed. libfile-stripnondeterminism-perl is already the newest version (1.14.1-2). libfile-stripnondeterminism-perl set to manually installed. libpam-runtime is already the newest version (1.7.0-3). libglib2.0-bin is already the newest version (2.84.1-2). libglib2.0-bin set to manually installed. libwebpdemux2 is already the newest version (1.5.0-0.1). libwebpdemux2 set to manually installed. tcl8.6 is already the newest version (8.6.16+dfsg-1). tcl8.6 set to manually installed. po-debconf is already the newest version (1.0.21+nmu1). po-debconf set to manually installed. libdb5.3t64 is already the newest version (5.3.28+dfsg2-9). patch is already the newest version (2.8-1). patch set to manually installed. libitm1 is already the newest version (14.2.0-19). libitm1 set to manually installed. libharfbuzz-icu0 is already the newest version (10.2.0-1+b1). libharfbuzz-icu0 set to manually installed. libxmuu1 is already the newest version (2:1.1.3-3+b4). libxmuu1 set to manually installed. libharfbuzz-dev is already the newest version (10.2.0-1+b1). libharfbuzz-dev set to manually installed. libcolord2 is already the newest version (1.4.7-3). libcolord2 set to manually installed. pkgconf-bin is already the newest version (1.8.1-4). pkgconf-bin set to manually installed. libxcb-render0-dev is already the newest version (1.17.0-2+b1). libxcb-render0-dev set to manually installed. tzdata is already the newest version (2025b-2). tzdata set to manually installed. libncursesw6 is already the newest version (6.5+20250216-2). libncursesw6 set to manually installed. liblapack-dev is already the newest version (3.12.1-2). liblapack-dev set to manually installed. gcc-14-base is already the newest version (14.2.0-19). libzzip-0-13t64 is already the newest version (0.13.78+dfsg.1-0.1). libzzip-0-13t64 set to manually installed. libsharpyuv0 is already the newest version (1.5.0-0.1). libsharpyuv0 set to manually installed. libatk-bridge2.0-0t64 is already the newest version (2.56.2-1). libatk-bridge2.0-0t64 set to manually installed. libpam-systemd is already the newest version (257.5-2). libpam-systemd set to manually installed. libattr1 is already the newest version (1:2.5.2-3). ucf is already the newest version (3.0051). ucf set to manually installed. lmodern is already the newest version (2.005-1). lmodern set to manually installed. libpcre2-posix3 is already the newest version (10.45-1). libpcre2-posix3 set to manually installed. autoconf is already the newest version (2.72-3.1). autoconf set to manually installed. t1utils is already the newest version (1.41-4+b1). t1utils set to manually installed. libmagic-mgc is already the newest version (1:5.46-5). libmagic-mgc set to manually installed. python3-packaging is already the newest version (25.0-1). python3-packaging set to manually installed. perl-base is already the newest version (5.40.1-3). libkadm5clnt-mit12 is already the newest version (1.21.3-5). libkadm5clnt-mit12 set to manually installed. liblzo2-2 is already the newest version (2.10-3+b1). liblzo2-2 set to manually installed. libgdk-pixbuf-2.0-0 is already the newest version (2.42.12+dfsg-2). libgdk-pixbuf-2.0-0 set to manually installed. libxrender-dev is already the newest version (1:0.9.12-1). libxrender-dev set to manually installed. libtext-charwidth-perl is already the newest version (0.04-11+b4). libtext-charwidth-perl set to manually installed. libpangoft2-1.0-0 is already the newest version (1.56.3-1). libpangoft2-1.0-0 set to manually installed. libidn2-dev is already the newest version (2.3.8-2). libidn2-dev set to manually installed. libsombok3 is already the newest version (2.4.0-2+b2). libsombok3 set to manually installed. libpython3-stdlib is already the newest version (3.13.3-1). libpython3-stdlib set to manually installed. zlib1g-dev is already the newest version (1:1.3.dfsg+really1.3.1-1+b1). zlib1g-dev set to manually installed. liblzma-dev is already the newest version (5.8.1-1). liblzma-dev set to manually installed. libnghttp3-9 is already the newest version (1.8.0-1). libnghttp3-9 set to manually installed. liblzma5 is already the newest version (5.8.1-1). libsm6 is already the newest version (2:1.2.6-1). libsm6 set to manually installed. groff-base is already the newest version (1.23.0-7). groff-base set to manually installed. libfontenc1 is already the newest version (1:1.1.8-1+b2). libfontenc1 set to manually installed. libstdc++-14-dev is already the newest version (14.2.0-19). libstdc++-14-dev set to manually installed. default-jdk is already the newest version (2:1.21-76). default-jdk set to manually installed. libpcsclite1 is already the newest version (2.3.3-1). libpcsclite1 set to manually installed. dpkg is already the newest version (1.22.18). libgtk-3-0t64 is already the newest version (3.24.49-3). libgtk-3-0t64 set to manually installed. libgl1 is already the newest version (1.7.0-1+b2). libgl1 set to manually installed. default-jre is already the newest version (2:1.21-76). default-jre set to manually installed. texlive-base is already the newest version (2024.20250309-1). texlive-base set to manually installed. libatspi2.0-0t64 is already the newest version (2.56.2-1). libatspi2.0-0t64 set to manually installed. libgmp-dev is already the newest version (2:6.3.0+dfsg-3). libgmp-dev set to manually installed. texlive-latex-recommended is already the newest version (2024.20250309-1). texlive-latex-recommended set to manually installed. libsm-dev is already the newest version (2:1.2.6-1). libsm-dev set to manually installed. libnghttp2-dev is already the newest version (1.64.0-1.1). libnghttp2-dev set to manually installed. diffutils is already the newest version (1:3.10-4). libsmartcols1 is already the newest version (2.41-4). libwayland-client0 is already the newest version (1.23.1-3). libwayland-client0 set to manually installed. libxi6 is already the newest version (2:1.8.2-1). libxi6 set to manually installed. gfortran-14 is already the newest version (14.2.0-19). gfortran-14 set to manually installed. libbsd0 is already the newest version (0.12.2-2). libbsd0 set to manually installed. libxfont2 is already the newest version (1:2.0.6-1+b3). libxfont2 set to manually installed. libgbm1 is already the newest version (25.0.4-1). libgbm1 set to manually installed. ca-certificates is already the newest version (20250419). ca-certificates set to manually installed. libfribidi-dev is already the newest version (1.0.16-1). libfribidi-dev set to manually installed. dbus-system-bus-common is already the newest version (1.16.2-2). dbus-system-bus-common set to manually installed. ca-certificates-java is already the newest version (20240118). ca-certificates-java set to manually installed. gir1.2-glib-2.0-dev is already the newest version (2.84.1-2). gir1.2-glib-2.0-dev set to manually installed. dh-autoreconf is already the newest version (20). dh-autoreconf set to manually installed. libxext-dev is already the newest version (2:1.3.4-1+b3). libxext-dev set to manually installed. bison is already the newest version (2:3.8.2+dfsg-1+b2). bison set to manually installed. libffi-dev is already the newest version (3.4.8-2). libffi-dev set to manually installed. libpcre2-dev is already the newest version (10.45-1). libpcre2-dev set to manually installed. libkrb5support0 is already the newest version (1.21.3-5). libkrb5support0 set to manually installed. libsqlite3-0 is already the newest version (3.46.1-3). sensible-utils is already the newest version (0.0.25). sensible-utils set to manually installed. dbus-user-session is already the newest version (1.16.2-2). dbus-user-session set to manually installed. libselinux1 is already the newest version (3.8.1-1). libisl23 is already the newest version (0.27-1). libisl23 set to manually installed. libgssrpc4t64 is already the newest version (1.21.3-5). libgssrpc4t64 set to manually installed. libtexlua53-5 is already the newest version (2024.20240313.70630+ds-6). libtexlua53-5 set to manually installed. mount is already the newest version (2.41-4). mount set to manually installed. python3.13-minimal is already the newest version (3.13.3-2). python3.13-minimal set to manually installed. dwz is already the newest version (0.15-1+b1). dwz set to manually installed. libcommons-parent-java is already the newest version (56-1). libcommons-parent-java set to manually installed. libxcb-glx0 is already the newest version (1.17.0-2+b1). libxcb-glx0 set to manually installed. libgdk-pixbuf2.0-common is already the newest version (2.42.12+dfsg-2). libgdk-pixbuf2.0-common set to manually installed. libdpkg-perl is already the newest version (1.22.18). libdpkg-perl set to manually installed. libxcb-xfixes0 is already the newest version (1.17.0-2+b1). libxcb-xfixes0 set to manually installed. libxcb-present0 is already the newest version (1.17.0-2+b1). libxcb-present0 set to manually installed. libx11-xcb1 is already the newest version (2:1.8.12-1). libx11-xcb1 set to manually installed. libgnutls-openssl27t64 is already the newest version (3.8.9-2). libgnutls-openssl27t64 set to manually installed. libxtst6 is already the newest version (2:1.2.5-1). libxtst6 set to manually installed. libdebconfclient0 is already the newest version (0.278). libmime-charset-perl is already the newest version (1.013.1-2). libmime-charset-perl set to manually installed. libsharpyuv-dev is already the newest version (1.5.0-0.1). libsharpyuv-dev set to manually installed. libx11-6 is already the newest version (2:1.8.12-1). libx11-6 set to manually installed. xkb-data is already the newest version (2.42-1). xkb-data set to manually installed. libtirpc-common is already the newest version (1.3.6+ds-1). libtirpc-common set to manually installed. libmpc3 is already the newest version (1.3.1-1+b3). libmpc3 set to manually installed. hicolor-icon-theme is already the newest version (0.18-2). hicolor-icon-theme set to manually installed. libicu-dev is already the newest version (76.1-3). libicu-dev set to manually installed. build-essential is already the newest version (12.12). build-essential set to manually installed. libmpfi0 is already the newest version (1.5.4+ds-4). libmpfi0 set to manually installed. libctf0 is already the newest version (2.44-3). libctf0 set to manually installed. libvulkan1 is already the newest version (1.4.309.0-1). libvulkan1 set to manually installed. libcap-ng0 is already the newest version (0.8.5-4+b1). libp11-kit0 is already the newest version (0.25.5-3). libp11-kit0 set to manually installed. libapparmor1 is already the newest version (4.1.0-1). libapparmor1 set to manually installed. xfonts-encodings is already the newest version (1:1.0.4-2.2). xfonts-encodings set to manually installed. libgmp10 is already the newest version (2:6.3.0+dfsg-3). texlive-plain-generic is already the newest version (2024.20250309-2). texlive-plain-generic set to manually installed. libtiff6 is already the newest version (4.7.0-3). libtiff6 set to manually installed. libpkgconf3 is already the newest version (1.8.1-4). libpkgconf3 set to manually installed. libfribidi0 is already the newest version (1.0.16-1). libfribidi0 set to manually installed. libwebpmux3 is already the newest version (1.5.0-0.1). libwebpmux3 set to manually installed. libdconf1 is already the newest version (0.40.0-5). libdconf1 set to manually installed. libx11-data is already the newest version (2:1.8.12-1). libx11-data set to manually installed. libthai-dev is already the newest version (0.1.29-2+b1). libthai-dev set to manually installed. libxau6 is already the newest version (1:1.0.11-1). libxau6 set to manually installed. texinfo-lib is already the newest version (7.1.1-1+b1). texinfo-lib set to manually installed. cpp is already the newest version (4:14.2.0-1). cpp set to manually installed. libpixman-1-dev is already the newest version (0.44.0-3). libpixman-1-dev set to manually installed. libpam0g is already the newest version (1.7.0-3). openjdk-21-jre-headless is already the newest version (21.0.7+6-1). openjdk-21-jre-headless set to manually installed. libwebpdecoder3 is already the newest version (1.5.0-0.1). libwebpdecoder3 set to manually installed. libxft2 is already the newest version (2.3.6-1+b4). libxft2 set to manually installed. libctf-nobfd0 is already the newest version (2.44-3). libctf-nobfd0 set to manually installed. hostname is already the newest version (3.25). libxkbfile1 is already the newest version (1:1.1.0-1+b4). libxkbfile1 set to manually installed. liblerc4 is already the newest version (4.0.0+ds-5). liblerc4 set to manually installed. The following NEW packages will be installed: libfontconfig1-dev x11proto-core-dev 127.0.0.1 - - [21/Jul/2025 16:24:09] "GET /./libfontconfig1-dev_2.15.0-2.3_arm64.deb HTTP/1.1" 200 - 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 273 kB of archives. After this operation, 287 kB of additional disk space will be used. Get:1 http://localhost:40243 ./ libfontconfig1-dev 2.15.0-2.3 [269 kB] 127.0.0.1 - - [21/Jul/2025 16:24:09] "GET /./x11proto-core-dev_2024.1-1_all.deb HTTP/1.1" 200 - Get:2 http://localhost:40243 ./ x11proto-core-dev 2024.1-1 [3312 B] Fetched 273 kB in 0s (10.2 MB/s) Chrooting into /srv/rebuilderd/tmp/mmdebstrap.mrWmXABZuT/ Selecting previously unselected package libfontconfig1-dev:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 174190 files and directories currently installed.) Preparing to unpack .../libfontconfig1-dev_2.15.0-2.3_arm64.deb ... Unpacking libfontconfig1-dev:arm64 (2.15.0-2.3) ... Selecting previously unselected package x11proto-core-dev. Preparing to unpack .../x11proto-core-dev_2024.1-1_all.deb ... Unpacking x11proto-core-dev (2024.1-1) ... Chrooting into /srv/rebuilderd/tmp/mmdebstrap.mrWmXABZuT/ Setting up libfontconfig1-dev:arm64 (2.15.0-2.3) ... Setting up x11proto-core-dev (2024.1-1) ... I: running --customize-hook in shell: sh -c 'chroot "$1" dpkg -r debootsnap-dummy' exec /srv/rebuilderd/tmp/mmdebstrap.mrWmXABZuT (Reading database ... 174197 files and directories currently installed.) Removing debootsnap-dummy (1.0) ... I: running --customize-hook in shell: sh -c 'chroot "$1" dpkg-query --showformat '${binary:Package}=${Version}\n' --show > "$1/pkglist"' exec /srv/rebuilderd/tmp/mmdebstrap.mrWmXABZuT I: running special hook: download /pkglist ./pkglist I: running --customize-hook in shell: sh -c 'rm "$1/pkglist"' exec /srv/rebuilderd/tmp/mmdebstrap.mrWmXABZuT I: running special hook: upload sources.list /etc/apt/sources.list I: waiting for background processes to finish... I: cleaning package lists and apt cache... I: skipping cleanup/reproducible as requested I: creating tarball... I: done I: removing tempdir /srv/rebuilderd/tmp/mmdebstrap.mrWmXABZuT... I: success in 296.7243 seconds Downloading dependency 511 of 521: texinfo-lib:arm64=7.1.1-1+b1 Downloading dependency 512 of 521: cpp:arm64=4:14.2.0-1 Downloading dependency 513 of 521: libpixman-1-dev:arm64=0.44.0-3 Downloading dependency 514 of 521: libpam0g:arm64=1.7.0-3 Downloading dependency 515 of 521: openjdk-21-jre-headless:arm64=21.0.7+6-1 Downloading dependency 516 of 521: libwebpdecoder3:arm64=1.5.0-0.1 Downloading dependency 517 of 521: libxft2:arm64=2.3.6-1+b4 Downloading dependency 518 of 521: libctf-nobfd0:arm64=2.44-3 Downloading dependency 519 of 521: hostname:arm64=3.25 Downloading dependency 520 of 521: libxkbfile1:arm64=1:1.1.0-1+b4 Downloading dependency 521 of 521: liblerc4:arm64=4.0.0+ds-5 env --chdir=/srv/rebuilderd/tmp/rebuilderdslyB5w/out DEB_BUILD_OPTIONS=parallel=4 LANG=C.UTF-8 LC_COLLATE=C.UTF-8 LC_CTYPE=C.UTF-8 SOURCE_DATE_EPOCH=1745963799 SBUILD_CONFIG=/srv/rebuilderd/tmp/debrebuild_4gEsN/debrebuild.sbuildrc.6AVfONNdFq5k sbuild --build=arm64 --host=arm64 --no-source --arch-any --no-arch-all --chroot=/srv/rebuilderd/tmp/debrebuild_4gEsN/debrebuild.tar.b5gleXdbFkiX --chroot-mode=unshare --dist=unstable --no-run-lintian --no-run-piuparts --no-run-autopkgtest --no-apt-update --no-apt-upgrade --no-apt-distupgrade --verbose --nolog --bd-uninstallable-explainer= --build-path=/build/reproducible-path --dsc-dir=r-base-4.5.0 /srv/rebuilderd/tmp/rebuilderdslyB5w/inputs/r-base_4.5.0-3.dsc I: consider moving your ~/.sbuildrc to /srv/rebuilderd/.config/sbuild/config.pl The Debian buildds switched to the "unshare" backend and sbuild will default to it in the future. To start using "unshare" add this to your `~/.config/sbuild/config.pl`: $chroot_mode = "unshare"; If you want to keep the old "schroot" mode even in the future, add the following to your `~/.config/sbuild/config.pl`: $chroot_mode = "schroot"; $schroot = "schroot"; sbuild (Debian sbuild) 0.89.3 (07 June 2025) on codethink02-arm64 +==============================================================================+ | r-base 4.5.0-3 (arm64) Mon, 21 Jul 2025 15:24:38 +0000 | +==============================================================================+ Package: r-base Version: 4.5.0-3 Source Version: 4.5.0-3 Distribution: unstable Machine Architecture: arm64 Host Architecture: arm64 Build Architecture: arm64 Build Type: any I: No tarballs found in /srv/rebuilderd/.cache/sbuild I: Unpacking /srv/rebuilderd/tmp/debrebuild_4gEsN/debrebuild.tar.b5gleXdbFkiX to /srv/rebuilderd/tmp/tmp.sbuild.iUuJKcFxow... I: Setting up the chroot... I: Creating chroot session... I: Setting up log color... I: Setting up apt archive... +------------------------------------------------------------------------------+ | Fetch source files Mon, 21 Jul 2025 15:24:55 +0000 | +------------------------------------------------------------------------------+ Local sources ------------- /srv/rebuilderd/tmp/rebuilderdslyB5w/inputs/r-base_4.5.0-3.dsc exists in /srv/rebuilderd/tmp/rebuilderdslyB5w/inputs; copying to chroot +------------------------------------------------------------------------------+ | Install package build dependencies Mon, 21 Jul 2025 15:24:58 +0000 | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: gcc (>= 4:4.9.2-2), g++ (>= 4:4.9.2-2), gfortran (>= 4:4.9.2-2), libblas-dev, liblapack-dev, tcl8.6-dev, tk8.6-dev, bison, groff-base, libncurses-dev, libreadline-dev, debhelper-compat (= 13), texinfo, libbz2-dev, liblzma-dev, libpcre2-dev, libcurl4-openssl-dev | libcurl4-dev, xdg-utils, zlib1g-dev, libpng-dev, libjpeg-dev, libx11-dev, libxt-dev, x11proto-core-dev, libpango1.0-dev, libcairo2-dev, libtiff-dev, xvfb, xauth, xfonts-base, texlive-base, texlive-latex-base, texlive-plain-generic, texlive-fonts-recommended, texlive-fonts-extra, texlive-extra-utils, texlive-latex-recommended, texlive-latex-extra, default-jdk | openjdk-10-jdk, mpack, bash-completion, libtirpc-dev, build-essential Filtered Build-Depends: gcc (>= 4:4.9.2-2), g++ (>= 4:4.9.2-2), gfortran (>= 4:4.9.2-2), libblas-dev, liblapack-dev, tcl8.6-dev, tk8.6-dev, bison, groff-base, libncurses-dev, libreadline-dev, debhelper-compat (= 13), texinfo, libbz2-dev, liblzma-dev, libpcre2-dev, libcurl4-openssl-dev, xdg-utils, zlib1g-dev, libpng-dev, libjpeg-dev, libx11-dev, libxt-dev, x11proto-core-dev, libpango1.0-dev, libcairo2-dev, libtiff-dev, xvfb, xauth, xfonts-base, texlive-base, texlive-latex-base, texlive-plain-generic, texlive-fonts-recommended, texlive-fonts-extra, texlive-extra-utils, texlive-latex-recommended, texlive-latex-extra, default-jdk, mpack, bash-completion, libtirpc-dev, build-essential dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/build/reproducible-path/resolver-bOSBod/apt_archive/sbuild-build-depends-main-dummy.deb'. Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies +------------------------------------------------------------------------------+ | Check architectures Mon, 21 Jul 2025 15:25:04 +0000 | +------------------------------------------------------------------------------+ Arch check ok (arm64 included in any all) +------------------------------------------------------------------------------+ | Build environment Mon, 21 Jul 2025 15:25:05 +0000 | +------------------------------------------------------------------------------+ Kernel: Linux 6.12.35+deb13-cloud-arm64 #1 SMP Debian 6.12.35-1 (2025-07-03) arm64 (aarch64) Toolchain package versions: binutils_2.44-3 dpkg-dev_1.22.18 g++-14_14.2.0-19 gcc-14_14.2.0-19 libc6-dev_2.41-7 libstdc++-14-dev_14.2.0-19 libstdc++6_14.2.0-19 linux-libc-dev_6.12.25-1 Package versions: adwaita-icon-theme_48.0-1 at-spi2-common_2.56.2-1 autoconf_2.72-3.1 automake_1:1.17-4 autopoint_0.23.1-2 autotools-dev_20240727.1 base-files_13.7 base-passwd_3.6.7 bash_5.2.37-2 bash-completion_1:2.16.0-7 binutils_2.44-3 binutils-aarch64-linux-gnu_2.44-3 binutils-common_2.44-3 bison_2:3.8.2+dfsg-1+b2 bsdextrautils_2.41-4 bsdutils_1:2.41-4 build-essential_12.12 bzip2_1.0.8-6 ca-certificates_20250419 ca-certificates-java_20240118 comerr-dev_2.1-1.47.2-1+b1 coreutils_9.7-2 cpp_4:14.2.0-1 cpp-14_14.2.0-19 cpp-14-aarch64-linux-gnu_14.2.0-19 cpp-aarch64-linux-gnu_4:14.2.0-1 dash_0.5.12-12 dbus_1.16.2-2 dbus-bin_1.16.2-2 dbus-daemon_1.16.2-2 dbus-session-bus-common_1.16.2-2 dbus-system-bus-common_1.16.2-2 dbus-user-session_1.16.2-2 dconf-gsettings-backend_0.40.0-5 dconf-service_0.40.0-5 debconf_1.5.91 debhelper_13.24.2 debianutils_5.22 default-jdk_2:1.21-76 default-jdk-headless_2:1.21-76 default-jre_2:1.21-76 default-jre-headless_2:1.21-76 dh-autoreconf_20 dh-strip-nondeterminism_1.14.1-2 diffutils_1:3.10-4 dpkg_1.22.18 dpkg-dev_1.22.18 dwz_0.15-1+b1 file_1:5.46-5 findutils_4.10.0-3 fontconfig_2.15.0-2.3 fontconfig-config_2.15.0-2.3 fonts-dejavu-core_2.37-8 fonts-dejavu-mono_2.37-8 fonts-lmodern_2.005-1 g++_4:14.2.0-1 g++-14_14.2.0-19 g++-14-aarch64-linux-gnu_14.2.0-19 g++-aarch64-linux-gnu_4:14.2.0-1 gcc_4:14.2.0-1 gcc-14_14.2.0-19 gcc-14-aarch64-linux-gnu_14.2.0-19 gcc-14-base_14.2.0-19 gcc-aarch64-linux-gnu_4:14.2.0-1 gettext_0.23.1-2 gettext-base_0.23.1-2 gfortran_4:14.2.0-1 gfortran-14_14.2.0-19 gfortran-14-aarch64-linux-gnu_14.2.0-19 gfortran-aarch64-linux-gnu_4:14.2.0-1 gir1.2-freedesktop_1.84.0-1 gir1.2-freedesktop-dev_1.84.0-1 gir1.2-glib-2.0_2.84.1-2 gir1.2-glib-2.0-dev_2.84.1-2 gir1.2-harfbuzz-0.0_10.2.0-1+b1 gir1.2-pango-1.0_1.56.3-1 girepository-tools_2.84.1-2 grep_3.11-4+b1 groff-base_1.23.0-7 gtk-update-icon-cache_4.18.4+ds-2 gzip_1.13-1 hicolor-icon-theme_0.18-2 hostname_3.25 icu-devtools_76.1-3 init-system-helpers_1.68 intltool-debian_0.35.0+20060710.6 java-common_0.76 krb5-multidev_1.21.3-5 libacl1_2.3.2-2+b1 libapache-pom-java_33-2 libapparmor1_4.1.0-1 libarchive-zip-perl_1.68-1 libasan8_14.2.0-19 libasound2-data_1.2.14-1 libasound2t64_1.2.14-1 libatk-bridge2.0-0t64_2.56.2-1 libatk1.0-0t64_2.56.2-1 libatomic1_14.2.0-19 libatspi2.0-0t64_2.56.2-1 libattr1_1:2.5.2-3 libaudit-common_1:4.0.2-2 libaudit1_1:4.0.2-2+b2 libavahi-client3_0.8-16 libavahi-common-data_0.8-16 libavahi-common3_0.8-16 libbinutils_2.44-3 libblas-dev_3.12.1-2 libblas3_3.12.1-2 libblkid-dev_2.41-4 libblkid1_2.41-4 libbrotli-dev_1.1.0-2+b7 libbrotli1_1.1.0-2+b7 libbsd0_0.12.2-2 libbz2-1.0_1.0.8-6 libbz2-dev_1.0.8-6 libc-bin_2.41-7 libc-dev-bin_2.41-7 libc6_2.41-7 libc6-dev_2.41-7 libcairo-gobject2_1.18.4-1+b1 libcairo-script-interpreter2_1.18.4-1+b1 libcairo2_1.18.4-1+b1 libcairo2-dev_1.18.4-1+b1 libcap-ng0_0.8.5-4+b1 libcap2_1:2.75-7 libcc1-0_14.2.0-19 libcloudproviders0_0.3.6-2 libcolord2_1.4.7-3 libcom-err2_1.47.2-1+b1 libcommons-logging-java_1.3.0-1 libcommons-parent-java_56-1 libcrypt-dev_1:4.4.38-1 libcrypt1_1:4.4.38-1 libctf-nobfd0_2.44-3 libctf0_2.44-3 libcups2t64_2.4.10-2+b1 libcurl4-openssl-dev_8.13.0-5 libcurl4t64_8.13.0-5 libdatrie-dev_0.2.13-3+b1 libdatrie1_0.2.13-3+b1 libdb5.3t64_5.3.28+dfsg2-9 libdbus-1-3_1.16.2-2 libdconf1_0.40.0-5 libdebconfclient0_0.278 libdebhelper-perl_13.24.2 libdeflate-dev_1.23-2 libdeflate0_1.23-2 libdpkg-perl_1.22.18 libdrm-amdgpu1_2.4.124-2 libdrm-common_2.4.124-2 libdrm2_2.4.124-2 libedit2_3.1-20250104-1 libelf1t64_0.192-4 libepoxy0_1.5.10-2 libevent-2.1-7t64_2.1.12-stable-10+b1 libexpat1_2.7.1-1 libexpat1-dev_2.7.1-1 libffi-dev_3.4.8-2 libffi8_3.4.8-2 libfile-homedir-perl_1.006-2 libfile-stripnondeterminism-perl_1.14.1-2 libfile-which-perl_1.27-2 libfontbox-java_1:1.8.16-5 libfontconfig-dev_2.15.0-2.3 libfontconfig1_2.15.0-2.3 libfontconfig1-dev_2.15.0-2.3 libfontenc1_1:1.1.8-1+b2 libfreetype-dev_2.13.3+dfsg-1 libfreetype6_2.13.3+dfsg-1 libfribidi-dev_1.0.16-1 libfribidi0_1.0.16-1 libgbm1_25.0.4-1 libgcc-14-dev_14.2.0-19 libgcc-s1_14.2.0-19 libgdbm-compat4t64_1.24-2 libgdbm6t64_1.24-2 libgdk-pixbuf-2.0-0_2.42.12+dfsg-2 libgdk-pixbuf2.0-common_2.42.12+dfsg-2 libgfortran-14-dev_14.2.0-19 libgfortran5_14.2.0-19 libgif7_5.2.2-1+b1 libgio-2.0-dev_2.84.1-2 libgio-2.0-dev-bin_2.84.1-2 libgirepository-2.0-0_2.84.1-2 libgl1_1.7.0-1+b2 libgl1-mesa-dri_25.0.4-1 libglib2.0-0t64_2.84.1-2 libglib2.0-bin_2.84.1-2 libglib2.0-data_2.84.1-2 libglib2.0-dev_2.84.1-2 libglib2.0-dev-bin_2.84.1-2 libglvnd0_1.7.0-1+b2 libglx-mesa0_25.0.4-1 libglx0_1.7.0-1+b2 libgmp-dev_2:6.3.0+dfsg-3 libgmp10_2:6.3.0+dfsg-3 libgmpxx4ldbl_2:6.3.0+dfsg-3 libgnutls-dane0t64_3.8.9-2 libgnutls-openssl27t64_3.8.9-2 libgnutls28-dev_3.8.9-2 libgnutls30t64_3.8.9-2 libgomp1_14.2.0-19 libgprofng0_2.44-3 libgraphite2-3_1.3.14-2+b1 libgraphite2-dev_1.3.14-2+b1 libgssapi-krb5-2_1.21.3-5 libgssrpc4t64_1.21.3-5 libgtk-3-0t64_3.24.49-3 libgtk-3-common_3.24.49-3 libharfbuzz-cairo0_10.2.0-1+b1 libharfbuzz-dev_10.2.0-1+b1 libharfbuzz-gobject0_10.2.0-1+b1 libharfbuzz-icu0_10.2.0-1+b1 libharfbuzz-subset0_10.2.0-1+b1 libharfbuzz0b_10.2.0-1+b1 libhogweed6t64_3.10.1-1 libhwasan0_14.2.0-19 libice-dev_2:1.1.1-1 libice6_2:1.1.1-1 libicu-dev_76.1-3 libicu76_76.1-3 libidn2-0_2.3.8-2 libidn2-dev_2.3.8-2 libisl23_0.27-1 libitm1_14.2.0-19 libjansson4_2.14-2+b3 libjbig-dev_2.1-6.1+b2 libjbig0_2.1-6.1+b2 libjpeg-dev_1:2.1.5-3.1 libjpeg62-turbo_1:2.1.5-3.1 libjpeg62-turbo-dev_1:2.1.5-3.1 libjs-jquery_3.6.1+dfsg+~3.5.14-1 libk5crypto3_1.21.3-5 libkadm5clnt-mit12_1.21.3-5 libkadm5srv-mit12_1.21.3-5 libkdb5-10t64_1.21.3-5 libkeyutils1_1.6.3-6 libkpathsea6_2024.20240313.70630+ds-6 libkrb5-3_1.21.3-5 libkrb5-dev_1.21.3-5 libkrb5support0_1.21.3-5 liblapack-dev_3.12.1-2 liblapack3_3.12.1-2 liblastlog2-2_2.41-4 liblcms2-2_2.16-2 libldap-dev_2.6.9+dfsg-2 libldap2_2.6.9+dfsg-2 liblerc-dev_4.0.0+ds-5 liblerc4_4.0.0+ds-5 libllvm19_1:19.1.7-3 liblsan0_14.2.0-19 liblzma-dev_5.8.1-1 liblzma5_5.8.1-1 liblzo2-2_2.10-3+b1 libmagic-mgc_1:5.46-5 libmagic1t64_1:5.46-5 libmd0_1.1.0-2+b1 libmime-charset-perl_1.013.1-2 libmount-dev_2.41-4 libmount1_2.41-4 libmpc3_1.3.1-1+b3 libmpfi0_1.5.4+ds-4 libmpfr6_4.2.2-1 libncurses-dev_6.5+20250216-2 libncurses6_6.5+20250216-2 libncursesw6_6.5+20250216-2 libnettle8t64_3.10.1-1 libnghttp2-14_1.64.0-1.1 libnghttp2-dev_1.64.0-1.1 libnghttp3-9_1.8.0-1 libnghttp3-dev_1.8.0-1 libnspr4_2:4.36-1 libnss3_2:3.110-1 libp11-kit-dev_0.25.5-3 libp11-kit0_0.25.5-3 libpam-modules_1.7.0-3 libpam-modules-bin_1.7.0-3 libpam-runtime_1.7.0-3 libpam-systemd_257.5-2 libpam0g_1.7.0-3 libpango-1.0-0_1.56.3-1 libpango1.0-dev_1.56.3-1 libpangocairo-1.0-0_1.56.3-1 libpangoft2-1.0-0_1.56.3-1 libpangoxft-1.0-0_1.56.3-1 libpaper-utils_2.2.5-0.3+b2 libpaper2_2.2.5-0.3+b2 libpcre2-16-0_10.45-1 libpcre2-32-0_10.45-1 libpcre2-8-0_10.45-1 libpcre2-dev_10.45-1 libpcre2-posix3_10.45-1 libpcsclite1_2.3.3-1 libpdfbox-java_1:1.8.16-5 libperl5.40_5.40.1-3 libpipeline1_1.5.8-1 libpixman-1-0_0.44.0-3 libpixman-1-dev_0.44.0-3 libpkgconf3_1.8.1-4 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https://salsa.debian.org/edd/r-base.git Build-Depends: gcc (>= 4:4.9.2-2), g++ (>= 4:4.9.2-2), gfortran (>= 4:4.9.2-2), libblas-dev, liblapack-dev, tcl8.6-dev, tk8.6-dev, bison, groff-base, libncurses-dev, libreadline-dev, debhelper-compat (= 13), texinfo, libbz2-dev, liblzma-dev, libpcre2-dev, libcurl4-openssl-dev | libcurl4-dev, xdg-utils, zlib1g-dev, libpng-dev, libjpeg-dev, libx11-dev, libxt-dev, x11proto-core-dev, libpango1.0-dev, libcairo2-dev, libtiff-dev, xvfb, xauth, xfonts-base, texlive-base, texlive-latex-base, texlive-plain-generic, texlive-fonts-recommended, texlive-fonts-extra, texlive-extra-utils, texlive-latex-recommended, texlive-latex-extra, default-jdk [!arm !hppa !kfreebsd-any !hurd-any] | openjdk-10-jdk [!arm !hppa !kfreebsd-any !hurd-any], mpack, bash-completion, libtirpc-dev Package-List: r-base deb gnu-r optional arch=all r-base-core deb gnu-r optional arch=any r-base-dev deb gnu-r optional arch=all r-base-html deb doc optional arch=all r-doc-html deb doc 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space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LC_COLLATE=C.UTF-8 LC_CTYPE=C.UTF-8 LOGNAME=sbuild PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SHELL=/bin/sh SOURCE_DATE_EPOCH=1745963799 USER=sbuild dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -us -uc -B dpkg-buildpackage: info: source package r-base dpkg-buildpackage: info: source version 4.5.0-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Dirk Eddelbuettel dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean *** clean *** dh_testdir dh_testroot rm -f configure-stamp \ build-stamp build-indep-stamp build-arch-stamp \ make-stamp make-arch-stamp make-indep-stamp \ install-indep-stamp install-arch-stamp \ check-stamp [ ! -f Makefile ] || /usr/bin/make distclean rm -f `find . -name "*~"` rm -rf debian/tmp debian/files debian/files* core debian/substvars debian/files rm -f doc/html/function.html doc/html/packages.html rm -f modules/*.so src/unix/Rscript dh_clean debian/rules binary-arch *** configure *** #automake #autoconf dh_testdir R_SHELL=/bin/bash \ mkdir_p="/bin/mkdir -p" \ MKDIR_P="/bin/mkdir -p" \ R_TEXI2DVICMD=emulation \ R_PAPERSIZE=letter \ R_BROWSER=xdg-open \ R_BZIPCMD=/bin/bzip2 \ R_GZIPCMD="/bin/gzip -n" \ PAGER=/usr/bin/pager \ PERL=/usr/bin/perl \ JAVA_HOME=/usr/lib/jvm/default-java \ R_UNZIPCMD=/usr/bin/unzip \ R_ZIPCMD=/usr/bin/zip \ R_PRINTCMD=/usr/bin/lpr \ TAR=/bin/tar \ LIBnn=lib \ AWK=/usr/bin/awk \ DD=/bin/dd \ GREP=/bin/grep \ FGREP="/bin/grep -F" \ EGREP="/bin/grep -E" \ SED=/bin/sed \ GETWD="/bin/pwd" \ CC=gcc \ CXX=g++ \ F77=gfortran \ FC=gfortran \ CFLAGS="`DEB_BUILD_MAINT_OPTIONS=optimize=-lto dpkg-buildflags --get CXXFLAGS` -Wdate-time -D_FORTIFY_SOURCE=2" \ CXXFLAGS="`DEB_BUILD_MAINT_OPTIONS=optimize=-lto dpkg-buildflags --get CXXFLAGS` -Wdate-time -D_FORTIFY_SOURCE=2" \ FFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard" \ FCFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard" \ CPPFLAGS= \ LDFLAGS="-Wl,-z,relro" \ FLIBS= \ rsharedir=/usr/share/R/share \ rincludedir=/usr/share/R/include \ rdocdir=/usr/share/R/doc \ ./configure --prefix=/usr \ --with-cairo \ --with-jpeglib \ --with-readline \ --with-tcltk \ --mandir=/usr/share/man \ --infodir=/usr/share/info \ --datadir=/usr/share/R/share \ --includedir=/usr/share/R/include \ --with-blas \ --with-lapack \ --enable-long-double \ --enable-R-profiling \ --enable-R-shlib \ --enable-memory-profiling \ --without-recommended-packages \ --build aarch64-linux-gnu checking build system type... aarch64-unknown-linux-gnu checking host system type... aarch64-unknown-linux-gnu loading site script './config.site' loading build-specific script './config.site' checking for pwd... /bin/pwd checking whether builddir is srcdir... yes checking whether ln -s works... yes checking for ar... ar checking for a BSD-compatible install... /usr/bin/install -c checking for sed... /bin/sed checking for which... /usr/bin/which checking for /usr/bin/pager... /usr/bin/pager checking for /bin/tar... /bin/tar checking for tex... /usr/bin/tex checking for pdftex... /usr/bin/pdftex checking for pdflatex... /usr/bin/pdflatex checking for makeindex... /usr/bin/makeindex checking for texi2any... /usr/bin/texi2any checking whether texi2any version is at least 6.1... yes checking for ginstall-info... no checking for install-info... no checking for texi2dvi... /usr/bin/texi2dvi checking for kpsewhich... /usr/bin/kpsewhich checking for latex inconsolata package... found zi4.sty checking for unzip... 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BSD nm checking the maximum length of command line arguments... 1572864 checking how to convert aarch64-unknown-linux-gnu file names to aarch64-unknown-linux-gnu format... func_convert_file_noop checking how to convert aarch64-unknown-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking for gawk... /usr/bin/awk checking command to parse /usr/bin/nm -B output from gcc -std=gnu23 object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for dlfcn.h... yes checking for objdir... .libs checking if gcc -std=gnu23 supports -fno-rtti -fno-exceptions... no checking for gcc -std=gnu23 option to produce PIC... -fPIC -DPIC checking if gcc -std=gnu23 PIC flag -fPIC -DPIC works... yes checking if gcc -std=gnu23 static flag -static works... yes checking if gcc -std=gnu23 supports -c -o file.o... yes checking if gcc -std=gnu23 supports -c -o file.o... 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verbose linking output from gfortran... -v checking for Fortran libraries of gfortran... -L/usr/lib/gcc/aarch64-linux-gnu/14 -L/usr/lib/gcc/aarch64-linux-gnu/14/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/14/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/14/../../.. -lgfortran -lm checking how to get verbose linking output from gcc -std=gnu23... -v checking for C libraries of gcc -std=gnu23... -L/usr/lib/gcc/aarch64-linux-gnu/14 -L/usr/lib/gcc/aarch64-linux-gnu/14/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/14/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/14/../../.. -lgcc_s checking for dummy main to link with Fortran libraries... none checking for Fortran name-mangling scheme... lower case, underscore, no extra underscore checking whether gfortran appends underscores to external 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checking whether popen exists and is declared... yes checking whether getline exists and is declared... yes checking whether select exists and is declared... yes checking whether setenv exists and is declared... yes checking whether unsetenv exists and is declared... yes checking whether getrlimit exists and is declared... yes checking whether setrlimit exists and is declared... yes checking whether getrusage exists and is declared... yes checking whether getpriority exists and is declared... yes checking whether chmod exists and is declared... yes checking whether mkfifo exists and is declared... yes checking whether stat exists and is declared... yes checking whether umask exists and is declared... yes checking whether gettimeofday exists and is declared... yes checking whether utimes exists and is declared... yes checking whether times exists and is declared... yes checking whether gmtime_r exists and is declared... yes checking whether localtime_r exists and is declared... yes checking whether nl_langinfo exists and is declared... yes checking whether access exists and is declared... yes checking whether chdir exists and is declared... yes checking whether execv exists and is declared... yes checking whether ftruncate exists and is declared... yes checking whether getcwd exists and is declared... yes checking whether geteuid exists and is declared... yes checking whether getuid exists and is declared... yes checking whether link exists and is declared... yes checking whether readlink exists and is declared... yes checking whether symlink exists and is declared... yes checking whether sysconf exists and is declared... yes checking whether sched_setaffinity exists and is declared... yes checking whether sched_getaffinity exists and is declared... yes checking whether utime exists and is declared... yes checking whether utimensat exists and is declared... yes checking for clock_gettime in -lrt... yes checking whether clock_gettime exists and is declared... yes checking whether timespec_get exists and is declared... yes checking for putenv... yes checking whether putenv is declared... yes checking for vasprintf... yes checking whether vasprintf is declared... yes checking for mempcpy... yes checking for realpath... yes checking whether realpath is declared... yes checking whether glob exists and is declared... yes checking for dladdr... yes checking for dlsym... yes checking whether dladdr is declared... yes checking whether dlsym is declared... yes checking whether RTLD_DEFAULT is declared... yes checking whether RTLD_NEXT is declared... yes checking for thread.h... no checking whether thr_stksegment exists and is declared... no checking for stpcpy... yes checking for isnan... yes checking whether isfinite is declared... yes checking whether isnan is declared... yes checking whether you have IEEE 754 floating-point arithmetic... yes checking whether putenv("FOO") can unset an environment variable... yes checking whether putenv("FOO=") can unset an environment variable... no checking for nl_langinfo and CODESET... yes checking for mkdtemp... yes checking for strdup... yes checking for strncasecmp... yes checking whether mkdtemp is declared... yes checking whether strdup is declared... yes checking whether strncasecmp is declared... yes checking for library containing connect... none required checking for library containing gethostbyname... none required checking for working calloc... yes checking for working isfinite... yes checking for working log1p... yes checking whether ftell works correctly on files opened for append... yes checking for working sigaction... yes checking whether the base type of an enum can be specified... yes checking whether mktime, gmtime, localtime work correctly in 2020... yes checking whether mktime sets errno... yes checking whether mktime works correctly after 2037... yes checking whether mktime works correctly before 1902... yes checking whether mktime works correctly in 1969... yes checking for complex.h... yes checking for double complex... yes checking whether C99 double complex is supported... yes checking whether cabs exists and is declared... yes checking whether carg exists and is declared... yes checking whether cexp exists and is declared... yes checking whether clog exists and is declared... yes checking whether csqrt exists and is declared... yes checking whether cpow exists and is declared... yes checking whether ccos exists and is declared... yes checking whether csin exists and is declared... yes checking whether ctan exists and is declared... yes checking whether cacos exists and is declared... yes checking whether casin exists and is declared... yes checking whether catan exists and is declared... yes checking whether ccosh exists and is declared... yes checking whether csinh exists and is declared... yes checking whether ctanh exists and is declared... yes checking for working ctanh... yes checking whether 'struct tm' includes tm_zone... yes checking whether 'struct tm' includes tm_gmtoff... yes configure: searching for an external BLAS configure: searching for BLAS in default libraries checking for dgemm_... no configure: searching for OpenBLAS checking for sgemm_ in -lopenblas... no configure: searching for BLIS checking for sgemm_ in -lblis... no configure: searching for ATLAS checking for ATL_xerbla in -latlas... no configure: searching for PhiPACK checking for dgemm_ in -lblas... yes checking for dgemm_ in -ldgemm... no configure: searching for IBM ESSL checking for dgemm_ in -lblas... 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(cached) yes checking for wctype.h... yes checking whether mbrtowc exists and is declared... yes checking whether wcrtomb exists and is declared... yes checking whether wcscoll exists and is declared... yes checking whether wcsftime exists and is declared... yes checking whether wcstod exists and is declared... yes checking whether mbstowcs exists and is declared... yes checking whether wcstombs exists and is declared... yes checking whether wctrans exists and is declared... yes checking whether wctype exists and is declared... yes checking whether iswctype exists and is declared... yes checking whether wcwidth exists and is declared... yes checking whether wcswidth exists and is declared... yes checking for wctrans_t... yes checking for mbstate_t... yes checking for ICU... yes checking for X... libraries , headers checking for gethostbyname... yes checking for connect... yes checking for remove... yes checking for shmat... yes checking for IceConnectionNumber in -lICE... yes checking for X11/Intrinsic.h... yes checking for XtToolkitInitialize in -lXt... yes using X11 ... yes checking for KeySym... yes checking for X11/Xmu/Atoms.h... no checking whether pkg-config knows about cairo and pango... yes checking whether cairo including pango is >= 1.2 and works... yes checking for tclConfig.sh... no checking for tclConfig.sh in library (sub)directories... /usr/lib/tcl8.6/tclConfig.sh checking for tkConfig.sh... no checking for tkConfig.sh in library (sub)directories... /usr/lib/tk8.6/tkConfig.sh checking for tcl.h... yes checking for tk.h... yes checking whether compiling/linking Tcl/Tk code works... yes checking for BSD networking... yes checking for rpc/types.h... no checking for tirpc/rpc/types.h... yes checking for tirpc/rpc/xdr.h... yes checking for XDR library... -ltirpc checking for XDR support... yes checking for inflateInit2_ in -lz... yes checking for zlib.h... yes checking if zlib version >= 1.2.5... yes checking whether zlib support suffices... yes checking for BZ2_bzlibVersion in -lbz2... yes checking for bzlib.h... yes checking if bzip2 version >= 1.0.6... yes checking whether bzip2 support suffices... yes checking for lzma_version_number in -llzma... yes checking for lzma.h... yes checking if lzma version >= 5.0.3... yes checking for ZSTD_versionNumber in -lzstd... yes checking for zstd.h... yes checking if zstd version >= 1.3.3... yes checking for ZSTD_decompressBound... yes checking for libdeflate.h... yes checking for libdeflate_alloc_compressor in -ldeflate... yes yes checking for pcre2.h... yes checking for pcre2_compile_8 in -lpcre2-8... yes checking if PCRE2 has Unicode support... yes checking whether PCRE support suffices... yes checking for curl-config... /usr/bin/curl-config checking libcurl version ... 8.13.0 checking for curl/curl.h... yes checking if libcurl is >= 7.28.0... yes checking if libcurl supports https... yes checking if pkg-config knows about libjpeg... yes checking if jpeglib version >= 6b... yes checking for jpeg_destroy_compress in -ljpeg... yes checking if pkg-config knows about libpng... yes checking if libpng version >= 1.2.7... yes checking for png_create_write_struct in -lpng... yes checking if pkg-config knows about libtiff... yes checking for tiffio.h... yes checking for TIFFOpen in -ltiff... yes checking whether leap seconds are treated according to POSIX... yes checking for inline... inline checking for struct stat.st_atim.tv_nsec... yes checking whether struct stat.st_atim is of type struct timespec... yes checking for setitimer... yes checking for gcc -std=gnu23 option to enable large file support... none needed checking for declarations of fseeko and ftello... yes checking whether KERN_USRSTACK sysctl is supported... no checking for visible __lib_stack_end... yes checking for paperconf... /usr/bin/paperconf checking for Fortran flag to compile .f90 files... none checking for Fortran flag to compile .f95 files... none checking for gfortran option to support OpenMP... (cached) -fopenmp checking whether NLS is requested... yes Configuring src/extra/intl directory checking for a race-free mkdir -p... /bin/mkdir -p checking whether we are using the GNU C Library 2 or newer... yes checking for ranlib... (cached) ranlib checking for simple visibility declarations... yes checking for stdint.h... yes checking for getpagesize... yes checking for working mmap... yes checking whether integer division by zero raises SIGFPE... no checking for inttypes.h... yes checking for unsigned long long int... yes checking for inttypes.h... (cached) yes checking whether the inttypes.h PRIxNN macros are broken... no checking for ld used by gcc -std=gnu23... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for shared library run path origin... done checking whether imported symbols can be declared weak... yes checking for multithread API to use... none checking for argz.h... yes checking for inttypes.h... (cached) yes checking for limits.h... 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(cached) extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft); checking for NL_LOCALE_NAME macro... yes checking for bison... bison checking version of bison... 3.8.2, ok checking for long long int... yes checking for long double... yes checking for wchar_t... yes checking for wint_t... yes checking for intmax_t... yes checking whether printf() supports POSIX/XSI format strings... yes checking whether we are using the GNU C Library 2.1 or newer... yes checking for stdint.h... (cached) yes checking for SIZE_MAX... yes checking for stdint.h... (cached) yes checking for CFPreferencesCopyAppValue... no checking for CFLocaleCopyCurrent... no checking for ptrdiff_t... yes checking for stddef.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for asprintf... yes checking for fwprintf... yes checking for putenv... 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(cached) no checking whether included gettext is requested... no checking for GNU gettext in libc... yes checking whether to use NLS... yes checking where the gettext function comes from... libc Finished configuring src/extra/intl directory checking whether OpenMP SIMD reduction is supported... yes using as R_SHELL for scripts ... /bin/bash configure: creating ./config.status config.status: creating Makeconf config.status: creating Makefile config.status: creating doc/Makefile config.status: creating doc/html/Makefile config.status: creating doc/manual/Makefile config.status: creating etc/Makefile config.status: creating etc/Makeconf config.status: creating etc/Renviron config.status: creating etc/javaconf config.status: creating etc/ldpaths config.status: creating m4/Makefile config.status: creating po/Makefile config.status: creating share/Makefile config.status: creating src/Makefile config.status: creating src/appl/Makefile config.status: creating src/extra/Makefile config.status: creating src/extra/blas/Makefile config.status: creating src/extra/intl/Makefile config.status: creating src/extra/tre/Makefile config.status: creating src/extra/tzone/Makefile config.status: creating src/extra/xdr/Makefile config.status: creating src/include/Makefile config.status: creating src/include/Rmath.h0 config.status: creating src/include/R_ext/Makefile config.status: creating src/library/Recommended/Makefile config.status: creating src/library/Makefile config.status: creating src/library/base/DESCRIPTION config.status: creating src/library/base/Makefile config.status: creating src/library/compiler/DESCRIPTION config.status: creating src/library/compiler/Makefile config.status: creating src/library/datasets/DESCRIPTION config.status: creating src/library/datasets/Makefile config.status: creating src/library/graphics/DESCRIPTION config.status: creating src/library/graphics/Makefile config.status: creating src/library/graphics/src/Makefile config.status: creating src/library/grDevices/DESCRIPTION config.status: creating src/library/grDevices/Makefile config.status: creating src/library/grDevices/src/Makefile config.status: creating src/library/grDevices/src/cairo/Makefile config.status: creating src/library/grid/DESCRIPTION config.status: creating src/library/grid/Makefile config.status: creating src/library/grid/src/Makefile config.status: creating src/library/methods/DESCRIPTION config.status: creating src/library/methods/Makefile config.status: creating src/library/methods/src/Makefile config.status: creating src/library/parallel/DESCRIPTION config.status: creating src/library/parallel/Makefile config.status: creating src/library/parallel/src/Makefile config.status: creating src/library/profile/Makefile config.status: creating src/library/stats/DESCRIPTION config.status: creating src/library/stats/Makefile config.status: creating src/library/stats/src/Makefile config.status: creating src/library/stats4/DESCRIPTION config.status: creating src/library/stats4/Makefile config.status: creating src/library/splines/DESCRIPTION config.status: creating src/library/splines/Makefile config.status: creating src/library/splines/src/Makefile config.status: creating src/library/tcltk/DESCRIPTION config.status: creating src/library/tcltk/Makefile config.status: creating src/library/tcltk/src/Makefile config.status: creating src/library/tools/DESCRIPTION config.status: creating src/library/tools/Makefile config.status: creating src/library/tools/src/Makefile config.status: creating src/library/translations/DESCRIPTION config.status: creating src/library/translations/Makefile config.status: creating src/library/utils/DESCRIPTION config.status: creating src/library/utils/Makefile config.status: creating src/library/utils/src/Makefile config.status: creating src/main/Makefile config.status: creating src/modules/Makefile config.status: creating src/modules/X11/Makefile config.status: creating src/modules/internet/Makefile config.status: creating src/modules/lapack/Makefile config.status: creating src/nmath/Makefile config.status: creating src/nmath/standalone/Makefile config.status: creating src/scripts/Makefile config.status: creating src/scripts/R.sh config.status: creating src/scripts/Rcmd config.status: creating src/scripts/javareconf config.status: creating src/scripts/mkinstalldirs config.status: creating src/scripts/pager config.status: creating src/scripts/rtags config.status: creating src/unix/Makefile config.status: creating tests/Makefile config.status: creating tests/Embedding/Makefile config.status: creating tests/Examples/Makefile config.status: creating tools/Makefile config.status: creating src/include/config.h config.status: executing libtool commands config.status: executing stamp-h commands R is now configured for aarch64-unknown-linux-gnu Source directory: . Installation directory: /usr C compiler: gcc -std=gnu23 -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 Fortran fixed-form compiler: gfortran -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard Default C++ compiler: g++ -std=gnu++17 -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 Fortran free-form compiler: gfortran -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard Obj-C compiler: Interfaces supported: X11, tcltk External libraries: pcre2, readline, BLAS(generic), LAPACK(generic), curl, libdeflate Additional capabilities: PNG, JPEG, TIFF, NLS, cairo, ICU Options enabled: shared R library, R profiling, memory profiling, libdeflate for lazyload Capabilities skipped: Options not enabled: shared BLAS Recommended packages: no touch configure-stamp *** make-arch *** /usr/bin/make CFLAGS="`DEB_BUILD_MAINT_OPTIONS=optimize=-lto dpkg-buildflags --get CXXFLAGS` -Wdate-time -D_FORTIFY_SOURCE=2" \ CXXFLAGS="`DEB_BUILD_MAINT_OPTIONS=optimize=-lto dpkg-buildflags --get CXXFLAGS` -Wdate-time -D_FORTIFY_SOURCE=2" \ FFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard" \ FCFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard" \ CC=gcc \ CXX=g++ \ F77=gfortran \ LDFLAGS="-Wl,-z,relro" \ PKG_BUILT_STAMP="""" \ R_GZIPCMD="/bin/gzip -n" \ R make[1]: Entering directory '/build/reproducible-path/r-base-4.5.0' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/m4' make[2]: Nothing to be done for 'R'. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/m4' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/tools' make[2]: Nothing to be done for 'R'. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/tools' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/doc' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/doc/html' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/doc/html' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/doc/manual' make[3]: Nothing to be done for 'R'. make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/doc/manual' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/doc' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/etc' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/etc' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/share' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/share' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/src' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/scripts' creating src/scripts/R.fe make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/scripts' mkdir -p -- ../../bin make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/scripts' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/scripts' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/include' mkdir -p -- ../../include make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/include/R_ext' mkdir -p -- ../../../include/R_ext make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/include/R_ext' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/include' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' making regcomp.d from regcomp.c making regerror.d from regerror.c making regexec.d from regexec.c making tre-ast.d from tre-ast.c making tre-compile.d from tre-compile.c making tre-match-approx.d from tre-match-approx.c making tre-match-backtrack.d from tre-match-backtrack.c making tre-match-parallel.d from tre-match-parallel.c making tre-mem.d from tre-mem.c making tre-parse.d from tre-parse.c making tre-stack.d from tre-stack.c make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c regcomp.c -o regcomp.o gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c regerror.c -o regerror.o gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c regexec.c -o regexec.o gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c tre-ast.c -o tre-ast.o gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c tre-compile.c -o tre-compile.o gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c tre-match-approx.c -o tre-match-approx.o gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c tre-match-backtrack.c -o tre-match-backtrack.o gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c tre-match-parallel.c -o tre-match-parallel.o gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c tre-mem.c -o tre-mem.o gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c tre-parse.c -o tre-parse.o gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c tre-stack.c -o tre-stack.o ar -cr libtre.a regcomp.o regerror.o regexec.o tre-ast.o tre-compile.o tre-match-approx.o tre-match-backtrack.o tre-match-parallel.o tre-mem.o tre-parse.o tre-stack.o ranlib libtre.a make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/appl' making integrate.d from integrate.c making interv.d from interv.c making maxcol.d from maxcol.c making optim.d from optim.c making pretty.d from pretty.c making uncmin.d from uncmin.c make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/appl' gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c integrate.c -o integrate.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c interv.c -o interv.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c maxcol.c -o maxcol.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c optim.c -o optim.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c pretty.c -o pretty.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c uncmin.c -o uncmin.o gfortran -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard -c dchdc.f -o dchdc.o gfortran -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard -c dpbfa.f -o dpbfa.o gfortran -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard -c dpbsl.f -o dpbsl.o gfortran -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard -c dpoco.f -o dpoco.o gfortran -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard -c dpodi.f -o dpodi.o gfortran -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard -c dpofa.f -o dpofa.o gfortran -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard -c dposl.f -o dposl.o gfortran -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard -c dqrdc.f -o dqrdc.o gfortran -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard -c dqrdc2.f -o dqrdc2.o gfortran -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard -c dqrls.f -o dqrls.o gfortran -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard -c dqrsl.f -o dqrsl.o gfortran -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard -c dqrutl.f -o dqrutl.o gfortran -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard -c dsvdc.f -o dsvdc.o gfortran -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard -c dtrco.f -o dtrco.o gfortran -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard -c dtrsl.f -o dtrsl.o ar -cr libappl.a integrate.o interv.o maxcol.o optim.o pretty.o uncmin.o dchdc.o dpbfa.o dpbsl.o dpoco.o dpodi.o dpofa.o dposl.o dqrdc.o dqrdc2.o dqrls.o dqrsl.o dqrutl.o dsvdc.o dtrco.o dtrsl.o ranlib libappl.a make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/appl' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/appl' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/nmath' making mlutils.d from mlutils.c making d1mach.d from d1mach.c making i1mach.d from i1mach.c making fmax2.d from fmax2.c making fmin2.d from fmin2.c making fprec.d from fprec.c making fround.d from fround.c making ftrunc.d from ftrunc.c making sign.d from sign.c making fsign.d from fsign.c making imax2.d from imax2.c making imin2.d from imin2.c making chebyshev.d from chebyshev.c making log1p.d from log1p.c making lgammacor.d from lgammacor.c making gammalims.d from gammalims.c making stirlerr.d from stirlerr.c making bd0.d from bd0.c making gamma.d from gamma.c making lgamma.d from lgamma.c making gamma_cody.d from gamma_cody.c making beta.d from beta.c making lbeta.d from lbeta.c making polygamma.d from polygamma.c making cospi.d from cospi.c making bessel_i.d from bessel_i.c making bessel_j.d from bessel_j.c making bessel_k.d from bessel_k.c making bessel_y.d from bessel_y.c making choose.d from choose.c making snorm.d from snorm.c making sexp.d from sexp.c making dgamma.d from dgamma.c making pgamma.d from pgamma.c making qgamma.d from qgamma.c making rgamma.d from rgamma.c making dbeta.d from dbeta.c making pbeta.d from pbeta.c making qbeta.d from qbeta.c making rbeta.d from rbeta.c making dunif.d from dunif.c making punif.d from punif.c making qunif.d from qunif.c making runif.d from runif.c making dnorm.d from dnorm.c making pnorm.d from pnorm.c making qnorm.d from qnorm.c making rnorm.d from rnorm.c making dlnorm.d from dlnorm.c making plnorm.d from plnorm.c making qlnorm.d from qlnorm.c making rlnorm.d from rlnorm.c making df.d from df.c making pf.d from pf.c making qf.d from qf.c making rf.d from rf.c making dnf.d from dnf.c making dt.d from dt.c making pt.d from pt.c making qt.d from qt.c making rt.d from rt.c making dnt.d from dnt.c making dchisq.d from dchisq.c making pchisq.d from pchisq.c making qchisq.d from qchisq.c making rchisq.d from rchisq.c making rnchisq.d from rnchisq.c making dbinom.d from dbinom.c making pbinom.d from pbinom.c making qbinom.d from qbinom.c making rbinom.d from rbinom.c making rmultinom.d from rmultinom.c making dcauchy.d from dcauchy.c making pcauchy.d from pcauchy.c making qcauchy.d from qcauchy.c making rcauchy.d from rcauchy.c making dexp.d from dexp.c making pexp.d from pexp.c making qexp.d from qexp.c making rexp.d from rexp.c making dgeom.d from dgeom.c making pgeom.d from pgeom.c making qgeom.d from qgeom.c making rgeom.d from rgeom.c making dhyper.d from dhyper.c making phyper.d from phyper.c making qhyper.d from qhyper.c making rhyper.d from rhyper.c making dnbinom.d from dnbinom.c making pnbinom.d from pnbinom.c making qnbinom.d from qnbinom.c making qnbinom_mu.d from qnbinom_mu.c making rnbinom.d from rnbinom.c making dpois.d from dpois.c making ppois.d from ppois.c making qpois.d from qpois.c making rpois.d from rpois.c making dweibull.d from dweibull.c making pweibull.d from pweibull.c making qweibull.d from qweibull.c making rweibull.d from rweibull.c making dlogis.d from dlogis.c making plogis.d from plogis.c making qlogis.d from qlogis.c making rlogis.d from rlogis.c making dnchisq.d from dnchisq.c making pnchisq.d from pnchisq.c making qnchisq.d from qnchisq.c making dnbeta.d from dnbeta.c making pnbeta.d from pnbeta.c making qnbeta.d from qnbeta.c making pnf.d from pnf.c making pnt.d from pnt.c making qnf.d from qnf.c making qnt.d from qnt.c making ptukey.d from ptukey.c making qtukey.d from qtukey.c making toms708.d from toms708.c making wilcox.d from wilcox.c making signrank.d from signrank.c make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/nmath' gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c mlutils.c -o mlutils.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c d1mach.c -o d1mach.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c i1mach.c -o i1mach.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c fmax2.c -o fmax2.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c fmin2.c -o fmin2.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c fprec.c -o fprec.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c fround.c -o fround.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c ftrunc.c -o ftrunc.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c sign.c -o sign.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c fsign.c -o fsign.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c imax2.c -o imax2.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c imin2.c -o imin2.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c chebyshev.c -o chebyshev.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c log1p.c -o log1p.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c lgammacor.c -o lgammacor.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c gammalims.c -o gammalims.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c stirlerr.c -o stirlerr.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c bd0.c -o bd0.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c gamma.c -o gamma.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c lgamma.c -o lgamma.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c gamma_cody.c -o gamma_cody.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c beta.c -o beta.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c lbeta.c -o lbeta.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c polygamma.c -o polygamma.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c cospi.c -o cospi.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c bessel_i.c -o bessel_i.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c bessel_j.c -o bessel_j.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c bessel_k.c -o bessel_k.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c bessel_y.c -o bessel_y.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c choose.c -o choose.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c snorm.c -o snorm.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c sexp.c -o sexp.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c dgamma.c -o dgamma.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c pgamma.c -o pgamma.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c qgamma.c -o qgamma.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c rgamma.c -o rgamma.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c dbeta.c -o dbeta.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c pbeta.c -o pbeta.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c qbeta.c -o qbeta.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c rbeta.c -o rbeta.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c dunif.c -o dunif.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c punif.c -o punif.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c qunif.c -o qunif.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c runif.c -o runif.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c dnorm.c -o dnorm.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c pnorm.c -o pnorm.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c qnorm.c -o qnorm.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c rnorm.c -o rnorm.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c dlnorm.c -o dlnorm.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c plnorm.c -o plnorm.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c qlnorm.c -o qlnorm.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c rlnorm.c -o rlnorm.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c df.c -o df.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c pf.c -o pf.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c qf.c -o qf.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c rf.c -o rf.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c dnf.c -o dnf.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c dt.c -o dt.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c pt.c -o pt.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c qt.c -o qt.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c rt.c -o rt.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c dnt.c -o dnt.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c dchisq.c -o dchisq.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c pchisq.c -o pchisq.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c qchisq.c -o qchisq.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c rchisq.c -o rchisq.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c rnchisq.c -o rnchisq.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c dbinom.c -o dbinom.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c pbinom.c -o pbinom.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c qbinom.c -o qbinom.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c rbinom.c -o rbinom.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c rmultinom.c -o rmultinom.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c dcauchy.c -o dcauchy.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c pcauchy.c -o pcauchy.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c qcauchy.c -o qcauchy.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c rcauchy.c -o rcauchy.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c dexp.c -o dexp.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c pexp.c -o pexp.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c qexp.c -o qexp.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c rexp.c -o rexp.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c dgeom.c -o dgeom.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c pgeom.c -o pgeom.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c qgeom.c -o qgeom.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c rgeom.c -o rgeom.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c dhyper.c -o dhyper.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c phyper.c -o phyper.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c qhyper.c -o qhyper.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c rhyper.c -o rhyper.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c dnbinom.c -o dnbinom.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c pnbinom.c -o pnbinom.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c qnbinom.c -o qnbinom.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c qnbinom_mu.c -o qnbinom_mu.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c rnbinom.c -o rnbinom.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c dpois.c -o dpois.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c ppois.c -o ppois.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c qpois.c -o qpois.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c rpois.c -o rpois.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c dweibull.c -o dweibull.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c pweibull.c -o pweibull.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c qweibull.c -o qweibull.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c rweibull.c -o rweibull.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c dlogis.c -o dlogis.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c plogis.c -o plogis.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c qlogis.c -o qlogis.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c rlogis.c -o rlogis.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c dnchisq.c -o dnchisq.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c pnchisq.c -o pnchisq.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c qnchisq.c -o qnchisq.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c dnbeta.c -o dnbeta.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c pnbeta.c -o pnbeta.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c qnbeta.c -o qnbeta.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c pnf.c -o pnf.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c pnt.c -o pnt.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c qnf.c -o qnf.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c qnt.c -o qnt.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c ptukey.c -o ptukey.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c qtukey.c -o qtukey.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c toms708.c -o toms708.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c wilcox.c -o wilcox.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c signrank.c -o signrank.o ar -cr libnmath.a mlutils.o d1mach.o i1mach.o fmax2.o fmin2.o fprec.o fround.o ftrunc.o sign.o fsign.o imax2.o imin2.o chebyshev.o log1p.o lgammacor.o gammalims.o stirlerr.o bd0.o gamma.o lgamma.o gamma_cody.o beta.o lbeta.o polygamma.o cospi.o bessel_i.o bessel_j.o bessel_k.o bessel_y.o choose.o snorm.o sexp.o dgamma.o pgamma.o qgamma.o rgamma.o dbeta.o pbeta.o qbeta.o rbeta.o dunif.o punif.o qunif.o runif.o dnorm.o pnorm.o qnorm.o rnorm.o dlnorm.o plnorm.o qlnorm.o rlnorm.o df.o pf.o qf.o rf.o dnf.o dt.o pt.o qt.o rt.o dnt.o dchisq.o pchisq.o qchisq.o rchisq.o rnchisq.o dbinom.o pbinom.o qbinom.o rbinom.o rmultinom.o dcauchy.o pcauchy.o qcauchy.o rcauchy.o dexp.o pexp.o qexp.o rexp.o dgeom.o pgeom.o qgeom.o rgeom.o dhyper.o phyper.o qhyper.o rhyper.o dnbinom.o pnbinom.o qnbinom.o qnbinom_mu.o rnbinom.o dpois.o ppois.o qpois.o rpois.o dweibull.o pweibull.o qweibull.o rweibull.o dlogis.o plogis.o qlogis.o rlogis.o dnchisq.o pnchisq.o qnchisq.o dnbeta.o pnbeta.o qnbeta.o pnf.o pnt.o qnf.o qnt.o ptukey.o qtukey.o toms708.o wilcox.o signrank.o ranlib libnmath.a make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/nmath' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/nmath' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/unix' config.status: creating src/unix/Makefile making Rembedded.d from Rembedded.c making dynload.d from dynload.c making system.d from system.c making sys-unix.d from sys-unix.c making sys-std.d from sys-std.c making X11.d from X11.c make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/unix' gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c Rembedded.c -o Rembedded.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c dynload.c -o dynload.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c system.c -o system.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c sys-unix.c -o sys-unix.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c sys-std.c -o sys-std.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c X11.c -o X11.o ar -cr libunix.a Rembedded.o dynload.o system.o sys-unix.o sys-std.o X11.o ranlib libunix.a make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/unix' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/unix' gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -DR_HOME='"/build/reproducible-path/r-base-4.5.0"' \ -o Rscript ./Rscript.c make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/unix' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/unix' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' config.status: creating src/main/Makefile making CommandLineArgs.d from CommandLineArgs.c making Rdynload.d from Rdynload.c making Renviron.d from Renviron.c making RNG.d from RNG.c making agrep.d from agrep.c making altclasses.d from altclasses.c making altrep.d from altrep.c making apply.d from apply.c making arithmetic.d from arithmetic.c making array.d from array.c making attrib.d from attrib.c making bind.d from bind.c making builtin.d from builtin.c making character.d from character.c making clippath.d from clippath.c making coerce.d from coerce.c making colors.d from colors.c making complex.d from complex.c making connections.d from connections.c making context.d from context.c making cum.d from cum.c making dcf.d from dcf.c making datetime.d from datetime.c making debug.d from debug.c making deparse.d from deparse.c making devices.d from devices.c making dotcode.d from dotcode.c making dounzip.d from dounzip.c making dstruct.d from dstruct.c making duplicate.d from duplicate.c making edit.d from edit.c making engine.d from engine.c making envir.d from envir.c making errors.d from errors.c making eval.d from eval.c making flexiblas.d from flexiblas.c making format.d from format.c making gevents.d from gevents.c making gram.d from gram.c making gram-ex.d from gram-ex.c making graphics.d from graphics.c making grep.d from grep.c making identical.d from identical.c making inlined.d from inlined.c making inspect.d from inspect.c making internet.d from internet.c making iosupport.d from iosupport.c making lapack.d from lapack.c making list.d from list.c making localecharset.d from localecharset.c making logic.d from logic.c making machine.d from machine.c making main.d from main.c making mapply.d from mapply.c making mask.d from mask.c making match.d from match.c making memory.d from memory.c making names.d from names.c making objects.d from objects.c making options.d from options.c making paste.d from paste.c making patterns.d from patterns.c making platform.d from platform.c making plot.d from plot.c making plot3d.d from plot3d.c making plotmath.d from plotmath.c making print.d from print.c making printarray.d from printarray.c making printvector.d from printvector.c making printutils.d from printutils.c making qsort.d from qsort.c making radixsort.d from radixsort.c making random.d from random.c making raw.d from raw.c making registration.d from registration.c making relop.d from relop.c making rlocale.d from rlocale.c making saveload.d from saveload.c making scan.d from scan.c making seq.d from seq.c making serialize.d from serialize.c making sort.d from sort.c making source.d from source.c making split.d from split.c making sprintf.d from sprintf.c making startup.d from startup.c making subassign.d from subassign.c making subscript.d from subscript.c making subset.d from subset.c making summary.d from summary.c making sysutils.d from sysutils.c making times.d from times.c making unique.d from unique.c making util.d from util.c making version.d from version.c making g_alab_her.d from g_alab_her.c making g_cntrlify.d from g_cntrlify.c making g_fontdb.d from g_fontdb.c making g_her_glyph.d from g_her_glyph.c making Rmain.d from Rmain.c making alloca.d from alloca.c making mkdtemp.d from mkdtemp.c making strdup.d from strdup.c making strncasecmp.d from strncasecmp.c make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c CommandLineArgs.c -o CommandLineArgs.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c Rdynload.c -o Rdynload.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c Renviron.c -o Renviron.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c RNG.c -o RNG.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c agrep.c -o agrep.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c altclasses.c -o altclasses.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c altrep.c -o altrep.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c apply.c -o apply.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c arithmetic.c -o arithmetic.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c array.c -o array.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c attrib.c -o attrib.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c bind.c -o bind.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c builtin.c -o builtin.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c character.c -o character.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c clippath.c -o clippath.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c coerce.c -o coerce.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c colors.c -o colors.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c complex.c -o complex.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c connections.c -o connections.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c context.c -o context.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c cum.c -o cum.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c dcf.c -o dcf.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c datetime.c -o datetime.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c debug.c -o debug.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c deparse.c -o deparse.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c devices.c -o devices.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c dotcode.c -o dotcode.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c dounzip.c -o dounzip.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c dstruct.c -o dstruct.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c duplicate.c -o duplicate.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c edit.c -o edit.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c engine.c -o engine.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c envir.c -o envir.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c errors.c -o errors.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c eval.c -o eval.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c flexiblas.c -o flexiblas.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c format.c -o format.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c gevents.c -o gevents.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c gram.c -o gram.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c gram-ex.c -o gram-ex.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c graphics.c -o graphics.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c grep.c -o grep.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c identical.c -o identical.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c inlined.c -o inlined.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c inspect.c -o inspect.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c internet.c -o internet.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c iosupport.c -o iosupport.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c lapack.c -o lapack.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c list.c -o list.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c localecharset.c -o localecharset.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c logic.c -o logic.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c machine.c -o machine.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c main.c -o main.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c mapply.c -o mapply.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c mask.c -o mask.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c match.c -o match.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c memory.c -o memory.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c names.c -o names.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c objects.c -o objects.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c options.c -o options.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c paste.c -o paste.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c patterns.c -o patterns.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c platform.c -o platform.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c plot.c -o plot.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c plot3d.c -o plot3d.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c plotmath.c -o plotmath.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c print.c -o print.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c printarray.c -o printarray.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c printvector.c -o printvector.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c printutils.c -o printutils.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c qsort.c -o qsort.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c radixsort.c -o radixsort.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c random.c -o random.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c raw.c -o raw.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c registration.c -o registration.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c relop.c -o relop.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c rlocale.c -o rlocale.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c saveload.c -o saveload.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c scan.c -o scan.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c seq.c -o seq.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c serialize.c -o serialize.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c sort.c -o sort.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c source.c -o source.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c split.c -o split.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c sprintf.c -o sprintf.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c startup.c -o startup.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c subassign.c -o subassign.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c subscript.c -o subscript.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c subset.c -o subset.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c summary.c -o summary.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c sysutils.c -o sysutils.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c times.c -o times.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c unique.c -o unique.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c util.c -o util.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c version.c -o version.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c g_alab_her.c -o g_alab_her.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c g_cntrlify.c -o g_cntrlify.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c g_fontdb.c -o g_fontdb.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c g_her_glyph.c -o g_her_glyph.o gfortran -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard -c xxxpr.f -o xxxpr.o gcc -shared -fopenmp -Wl,-z,relro -o libR.so CommandLineArgs.o Rdynload.o Renviron.o RNG.o agrep.o altclasses.o altrep.o apply.o arithmetic.o array.o attrib.o bind.o builtin.o character.o clippath.o coerce.o colors.o complex.o connections.o context.o cum.o dcf.o datetime.o debug.o deparse.o devices.o dotcode.o dounzip.o dstruct.o duplicate.o edit.o engine.o envir.o errors.o eval.o flexiblas.o format.o gevents.o gram.o gram-ex.o graphics.o grep.o identical.o inlined.o inspect.o internet.o iosupport.o lapack.o list.o localecharset.o logic.o machine.o main.o mapply.o mask.o match.o memory.o names.o objects.o options.o paste.o patterns.o platform.o plot.o plot3d.o plotmath.o print.o printarray.o printvector.o printutils.o qsort.o radixsort.o random.o raw.o registration.o relop.o rlocale.o saveload.o scan.o seq.o serialize.o sort.o source.o split.o sprintf.o startup.o subassign.o subscript.o subset.o summary.o sysutils.o times.o unique.o util.o version.o g_alab_her.o g_cntrlify.o g_fontdb.o g_her_glyph.o xxxpr.o `ls ../unix/*.o ../appl/*.o ../nmath/*.o` ../extra/tre/libtre.a -lblas -lgfortran -lm -lreadline -lpcre2-8 -ldeflate -lzstd -llzma -lbz2 -lz -ltirpc -lrt -ldl -lm -licuuc -licui18n make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' mkdir -p -- /build/reproducible-path/r-base-4.5.0/bin/exec mkdir -p -- /build/reproducible-path/r-base-4.5.0/lib make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c Rmain.c -o Rmain.o gcc -Wl,--export-dynamic -fopenmp -L"../../lib" -Wl,-z,relro -o R.bin Rmain.o -lR make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/internet' making Rhttpd.d from Rhttpd.c making Rsock.d from Rsock.c making internet.d from internet.c making libcurl.d from libcurl.c making sock.d from sock.c making sockconn.d from sockconn.c make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/internet' gcc -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c Rhttpd.c -o Rhttpd.o gcc -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c Rsock.c -o Rsock.o gcc -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c internet.c -o internet.o gcc -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c libcurl.c -o libcurl.o gcc -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c sock.c -o sock.o gcc -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c sockconn.c -o sockconn.o gcc -shared -L"../../../lib" -Wl,-z,relro -o internet.so Rhttpd.o Rsock.o internet.o libcurl.o sock.o sockconn.o -lcurl -lR make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/internet' mkdir -p -- /build/reproducible-path/r-base-4.5.0/modules make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/internet' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/internet' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/internet' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/lapack' making Lapack.d from Lapack.c make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/lapack' gcc -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c Lapack.c -o Lapack.o gcc -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c ../../main/flexiblas.c -o flexiblas.o gcc -shared -L"../../../lib" -Wl,-z,relro -o lapack.so Lapack.o flexiblas.o -lR -llapack -lblas -lgfortran -lm make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/lapack' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/lapack' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/lapack' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/lapack' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' making devX11.d from devX11.c making rotated.d from rotated.c making rbitmap.d from rbitmap.c make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' gcc -I/usr/include/libpng16 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I. -I../../../src/include -I../../../src/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -pthread -I../../../src/library/grDevices/src/cairo -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c devX11.c -o devX11.o gcc -I/usr/include/libpng16 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I. -I../../../src/include -I../../../src/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -pthread -I../../../src/library/grDevices/src/cairo -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c rotated.c -o rotated.o gcc -I/usr/include/libpng16 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I. -I../../../src/include -I../../../src/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -pthread -I../../../src/library/grDevices/src/cairo -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c rbitmap.c -o rbitmap.o gcc -shared -L"../../../lib" -Wl,-z,relro -o R_X11.so devX11.o rotated.o rbitmap.o -ltiff -ljpeg -lpng16 -lSM -lICE -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lharfbuzz -lz -lpng16 -lcairo -lX11 -lXext -lX11 -lXt -lR -lm gcc -I/usr/include/libpng16 -I/usr/include/aarch64-linux-gnu -I/usr/include/webp -I. -I../../../src/include -I../../../src/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -pthread -I../../../src/library/grDevices/src/cairo -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c dataentry.c -o dataentry.o gcc -shared -L"../../../lib" -Wl,-z,relro -o R_de.so dataentry.o -lSM -lICE -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lharfbuzz -lz -lpng16 -lcairo -lX11 -lXext -lX11 -lXt -lR -lm make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library' mkdir -p -- ../../library make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/profile' building system startup profile mkdir -p -- ../../../library/base/R make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/profile' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/translations' building package 'translations' mkdir -p -- ../../../library/translations make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/translations' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/translations' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/translations' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/base' building package 'base' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/base' mkdir -p -- ../../../library/base/demo make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/base' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/base' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' building package 'tools' mkdir -p -- ../../../library/tools make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' mkdir -p -- ../../../library/tools/R make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools/src' making text.d from text.c making init.d from init.c making Rmd5.d from Rmd5.c making md5.d from md5.c making signals.d from signals.c making install.d from install.c making getfmts.d from getfmts.c making http.d from http.c making gramLatex.d from gramLatex.c making gramRd.d from gramRd.c making pdscan.d from pdscan.c making Rsha256.d from Rsha256.c making sha256.d from sha256.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c text.c -o text.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c Rmd5.c -o Rmd5.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c md5.c -o md5.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c signals.c -o signals.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c install.c -o install.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c getfmts.c -o getfmts.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c http.c -o http.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c gramLatex.c -o gramLatex.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c gramRd.c -o gramRd.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c pdscan.c -o pdscan.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c Rsha256.c -o Rsha256.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c sha256.c -o sha256.o gcc -shared -L../../../../lib -Wl,-z,relro -o tools.so text.o init.o Rmd5.o md5.o signals.o install.o getfmts.o http.o gramLatex.o gramRd.o pdscan.o Rsha256.o sha256.o -L../../../../lib -lR make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools/src' mkdir -p -- ../../../../library/tools/libs make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' installing 'sysdata.rda' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' building package 'compiler' mkdir -p -- ../../../library/compiler make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' mkdir -p -- ../../../library/compiler/R make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' byte-compiling package 'compiler' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/base' byte-compiling package 'base' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/base' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' byte-compiling package 'tools' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' building package 'utils' mkdir -p -- ../../../library/utils mkdir -p -- ../../../library/utils/doc make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' mkdir -p -- ../../../library/utils/R mkdir -p -- ../../../library/utils/Sweave mkdir -p -- ../../../library/utils/misc make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils/src' making init.d from init.c making io.d from io.c making size.d from size.c making sock.d from sock.c making stubs.d from stubs.c making utils.d from utils.c making hashtab.d from hashtab.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c io.c -o io.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c size.c -o size.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c sock.c -o sock.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c stubs.c -o stubs.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c utils.c -o utils.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c hashtab.c -o hashtab.o gcc -shared -L../../../../lib -Wl,-z,relro -o utils.so init.o io.o size.o sock.o stubs.o utils.o hashtab.o -L../../../../lib -lR make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils/src' mkdir -p -- ../../../../library/utils/libs make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' installing 'sysdata.rda' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' byte-compiling package 'utils' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' building package 'grDevices' mkdir -p -- ../../../library/grDevices make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' mkdir -p -- ../../../library/grDevices/R mkdir -p -- ../../../library/grDevices/afm mkdir -p -- ../../../library/grDevices/enc mkdir -p -- ../../../library/grDevices/fonts/Roboto mkdir -p -- ../../../library/grDevices/fonts/Montserrat/static mkdir -p -- ../../../library/grDevices/icc make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src' making axis_scales.d from axis_scales.c making chull.d from chull.c making devices.d from devices.c making init.d from init.c making stubs.d from stubs.c making colors.d from colors.c making clippath.d from clippath.c making patterns.d from patterns.c making mask.d from mask.c making group.d from group.c making devCairo.d from devCairo.c making devPicTeX.d from devPicTeX.c making devPS.d from devPS.c making devQuartz.d from devQuartz.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c axis_scales.c -o axis_scales.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c chull.c -o chull.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c devices.c -o devices.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c stubs.c -o stubs.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c colors.c -o colors.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c clippath.c -o clippath.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c patterns.c -o patterns.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c mask.c -o mask.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c group.c -o group.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c devCairo.c -o devCairo.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c devPicTeX.c -o devPicTeX.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c devPS.c -o devPS.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c devQuartz.c -o devQuartz.o gcc -shared -L../../../../lib -Wl,-z,relro -o grDevices.so axis_scales.o chull.o devices.o init.o stubs.o colors.o clippath.o patterns.o mask.o group.o devCairo.o devPicTeX.o devPS.o devQuartz.o -lz -L../../../../lib -lR make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src' mkdir -p -- ../../../../library/grDevices/libs make[8]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' making cairoBM.d from cairoBM.c make[9]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' make[10]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' gcc -I. -I../../../../../src/include -I../../../../../src/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/aarch64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -pthread -I../../../../../src/modules/X11 -DHAVE_CONFIG_H -fopenmp -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c cairoBM.c -o cairoBM.o gcc -shared -L"../../../../../lib" -Wl,-z,relro -o cairo.so cairoBM.o ../../../../../src/modules/X11/rbitmap.o -ltiff -ljpeg -lpng16 -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lharfbuzz -lz -lcairo -lpng16 -L"../../../../../lib" -lR -lm make[10]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' make[9]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' make[8]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' byte-compiling package 'grDevices' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' building package 'graphics' mkdir -p -- ../../../library/graphics make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' mkdir -p -- ../../../library/graphics/R make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics/src' making init.d from init.c making base.d from base.c making graphics.d from graphics.c making par.d from par.c making plot.d from plot.c making plot3d.d from plot3d.c making stem.d from stem.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c base.c -o base.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c graphics.c -o graphics.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c par.c -o par.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c plot.c -o plot.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c plot3d.c -o plot3d.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c stem.c -o stem.o gcc -shared -L../../../../lib -Wl,-z,relro -o graphics.so init.o base.o graphics.o par.o plot.o plot3d.o stem.o -L../../../../lib -lR make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics/src' mkdir -p -- ../../../../library/graphics/libs make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' byte-compiling package 'graphics' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' building package 'stats' mkdir -p -- ../../../library/stats mkdir -p -- ../../../library/stats/doc make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' mkdir -p -- ../../../library/stats/R make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats/src' making init.d from init.c making kmeans.d from kmeans.c making ansari.d from ansari.c making bandwidths.d from bandwidths.c making chisqsim.d from chisqsim.c making d2x2xk.d from d2x2xk.c making fexact.d from fexact.c making kendall.d from kendall.c making ks.d from ks.c making line.d from line.c making smooth.d from smooth.c making prho.d from prho.c making swilk.d from swilk.c making ksmooth.d from ksmooth.c making loessc.d from loessc.c making monoSpl.d from monoSpl.c making isoreg.d from isoreg.c making Srunmed.d from Srunmed.c making dblcen.d from dblcen.c making distance.d from distance.c making hclust-utils.d from hclust-utils.c making nls.d from nls.c making rWishart.d from rWishart.c making HoltWinters.d from HoltWinters.c making PPsum.d from PPsum.c making arima.d from arima.c making burg.d from burg.c making filter.d from filter.c making mAR.d from mAR.c making pacf.d from pacf.c making starma.d from starma.c making port.d from port.c making family.d from family.c making sbart.d from sbart.c making approx.d from approx.c making loglin.d from loglin.c making lowess.d from lowess.c making massdist.d from massdist.c making splines.d from splines.c making lm.d from lm.c making complete_cases.d from complete_cases.c making cov.d from cov.c making deriv.d from deriv.c making fft.d from fft.c making fourier.d from fourier.c making model.d from model.c making optim.d from optim.c making optimize.d from optimize.c making integrate.d from integrate.c making random.d from random.c making distn.d from distn.c making zeroin.d from zeroin.c making rcont.d from rcont.c making influence.d from influence.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c kmeans.c -o kmeans.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c ansari.c -o ansari.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c bandwidths.c -o bandwidths.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c chisqsim.c -o chisqsim.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c d2x2xk.c -o d2x2xk.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c fexact.c -o fexact.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c kendall.c -o kendall.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c ks.c -o ks.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c line.c -o line.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c smooth.c -o smooth.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c prho.c -o prho.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c swilk.c -o swilk.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c ksmooth.c -o ksmooth.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c loessc.c -o loessc.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c monoSpl.c -o monoSpl.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c isoreg.c -o isoreg.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c Srunmed.c -o Srunmed.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c dblcen.c -o dblcen.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c distance.c -o distance.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c hclust-utils.c -o hclust-utils.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c nls.c -o nls.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c rWishart.c -o rWishart.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c HoltWinters.c -o HoltWinters.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c PPsum.c -o PPsum.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c arima.c -o arima.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c burg.c -o burg.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c filter.c -o filter.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c mAR.c -o mAR.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c pacf.c -o pacf.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c starma.c -o starma.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c port.c -o port.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c family.c -o family.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c sbart.c -o sbart.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c approx.c -o approx.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c loglin.c -o loglin.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c lowess.c -o lowess.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c massdist.c -o massdist.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c splines.c -o splines.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c lm.c -o lm.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c complete_cases.c -o complete_cases.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c cov.c -o cov.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c deriv.c -o deriv.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c fft.c -o fft.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c fourier.c -o fourier.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c model.c -o model.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c optim.c -o optim.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c optimize.c -o optimize.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c integrate.c -o integrate.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c random.c -o random.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c distn.c -o distn.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c zeroin.c -o zeroin.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c rcont.c -o rcont.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c influence.c -o influence.o gfortran -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard -c bsplvd.f -o bsplvd.o gfortran -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard -c bvalue.f -o bvalue.o gfortran -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard -c bvalus.f -o bvalus.o gfortran -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard -c loessf.f -o loessf.o gfortran -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard -c ppr.f -o ppr.o gfortran -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard -c qsbart.f -o qsbart.o gfortran -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard -c sgram.f -o sgram.o gfortran -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard -c sinerp.f -o sinerp.o gfortran -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard -c sslvrg.f -o sslvrg.o gfortran -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard -c stxwx.f -o stxwx.o gfortran -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard -c hclust.f -o hclust.o gfortran -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard -c kmns.f -o kmns.o gfortran -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard -c eureka.f -o eureka.o gfortran -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard -c stl.f -o stl.o gfortran -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard -c portsrc.f -o portsrc.o gfortran -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard -c lminfl.f -o lminfl.o gcc -shared -L../../../../lib -Wl,-z,relro -o stats.so init.o kmeans.o ansari.o bandwidths.o chisqsim.o d2x2xk.o fexact.o kendall.o ks.o line.o smooth.o prho.o swilk.o ksmooth.o loessc.o monoSpl.o isoreg.o Srunmed.o dblcen.o distance.o hclust-utils.o nls.o rWishart.o HoltWinters.o PPsum.o arima.o burg.o filter.o mAR.o pacf.o starma.o port.o family.o sbart.o approx.o loglin.o lowess.o massdist.o splines.o lm.o complete_cases.o cov.o deriv.o fft.o fourier.o model.o optim.o optimize.o integrate.o random.o distn.o zeroin.o rcont.o influence.o bsplvd.o bvalue.o bvalus.o loessf.o ppr.o qsbart.o sgram.o sinerp.o sslvrg.o stxwx.o hclust.o kmns.o eureka.o stl.o portsrc.o lminfl.o -fopenmp -llapack -lblas -lgfortran -lm -L../../../../lib -lR make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats/src' mkdir -p -- ../../../../library/stats/libs make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' byte-compiling package 'stats' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/datasets' building package 'datasets' mkdir -p -- ../../../library/datasets make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/datasets' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/datasets' mkdir -p -- ../../../library/datasets/data make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/datasets' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' building package 'methods' mkdir -p -- ../../../library/methods make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' mkdir -p -- ../../../library/methods/R make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods/src' making do_substitute_direct.d from do_substitute_direct.c making init.d from init.c making methods_list_dispatch.d from methods_list_dispatch.c making slot.d from slot.c making class_support.d from class_support.c making tests.d from tests.c making utils.d from utils.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c do_substitute_direct.c -o do_substitute_direct.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c methods_list_dispatch.c -o methods_list_dispatch.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c slot.c -o slot.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c class_support.c -o class_support.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c tests.c -o tests.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c utils.c -o utils.o gcc -shared -L../../../../lib -Wl,-z,relro -o methods.so do_substitute_direct.o init.o methods_list_dispatch.o slot.o class_support.o tests.o utils.o -L../../../../lib -lR make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods/src' mkdir -p -- ../../../../library/methods/libs make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' byte-compiling package 'methods' initializing class and method definitions ... done make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' building package 'grid' mkdir -p -- ../../../library/grid mkdir -p -- ../../../library/grid/doc make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' mkdir -p -- ../../../library/grid/R make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid/src' making clippath.d from clippath.c making gpar.d from gpar.c making grid.d from grid.c making just.d from just.c making layout.d from layout.c making mask.d from mask.c making matrix.d from matrix.c making path.d from path.c making register.d from register.c making state.d from state.c making typeset.d from typeset.c making unit.d from unit.c making util.d from util.c making viewport.d from viewport.c gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c clippath.c -o clippath.o gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c gpar.c -o gpar.o gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c grid.c -o grid.o gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c just.c -o just.o gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c layout.c -o layout.o gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c mask.c -o mask.o gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c matrix.c -o matrix.o gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c path.c -o path.o gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c register.c -o register.o gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c state.c -o state.o gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c typeset.c -o typeset.o gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c unit.c -o unit.o gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c util.c -o util.o gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c viewport.c -o viewport.o gcc -shared -L../../../../lib -Wl,-z,relro -o grid.so clippath.o gpar.o grid.o just.o layout.o mask.o matrix.o path.o register.o state.o typeset.o unit.o util.o viewport.o -L../../../../lib -lR make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid/src' mkdir -p -- ../../../../library/grid/libs make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' byte-compiling package 'grid' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' building package 'splines' mkdir -p -- ../../../library/splines make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' mkdir -p -- ../../../library/splines/R make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines/src' making splines.d from splines.c gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c splines.c -o splines.o gcc -shared -L../../../../lib -Wl,-z,relro -o splines.so splines.o -L../../../../lib -lR make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines/src' mkdir -p -- ../../../../library/splines/libs make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' byte-compiling package 'splines' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' building package 'stats4' mkdir -p -- ../../../library/stats4 make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' mkdir -p -- ../../../library/stats4/R make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' byte-compiling package 'stats4' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' building package 'tcltk' mkdir -p -- ../../../library/tcltk/R make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' mkdir -p -- ../../../library/tcltk/exec make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk/src' making init.d from init.c making tcltk.d from tcltk.c making tcltk_unix.d from tcltk_unix.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/include/tcl8.6 -I/usr/include/tcl8.6 -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/include/tcl8.6 -I/usr/include/tcl8.6 -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c tcltk.c -o tcltk.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/include/tcl8.6 -I/usr/include/tcl8.6 -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c tcltk_unix.c -o tcltk_unix.o gcc -shared -L../../../../lib -Wl,-z,relro -o tcltk.so init.o tcltk.o tcltk_unix.o -L/usr/lib/aarch64-linux-gnu -ltcl8.6 -L/usr/lib/aarch64-linux-gnu -ltk8.6 -lX11 -lXss -lXext -lm -L../../../../lib -lR make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk/src' mkdir -p -- ../../../../library/tcltk/libs make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk/src' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' byte-compiling package 'tcltk' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' building package 'parallel' mkdir -p -- ../../../library/parallel mkdir -p -- ../../../library/parallel/doc make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' mkdir -p -- ../../../library/parallel/R make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel/src' making init.d from init.c making rngstream.d from rngstream.c making fork.d from fork.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c rngstream.c -o rngstream.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fvisibility=hidden -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c fork.c -o fork.o gcc -shared -L../../../../lib -Wl,-z,relro -o parallel.so init.o rngstream.o fork.o -L../../../../lib -lR make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel/src' mkdir -p -- ../../../../library/parallel/libs make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' byte-compiling package 'parallel' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/base' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/base' installing parsed NAMESPACE files make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/tests' make[2]: Nothing to be done for 'R'. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/tests' you should 'make docs' now ... make[1]: Leaving directory '/build/reproducible-path/r-base-4.5.0' (cd src/nmath/standalone; \ /usr/bin/make CFLAGS="`DEB_BUILD_MAINT_OPTIONS=optimize=-lto dpkg-buildflags --get CXXFLAGS` -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT" \ CXXFLAGS="`DEB_BUILD_MAINT_OPTIONS=optimize=-lto dpkg-buildflags --get CXXFLAGS` -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT" \ FFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard -D_REENTRANT" \ CC=gcc \ CXX=g++ \ F77=gfortran \ R_GZIPCMD="/bin/gzip -n" \ libRmath_la_LDFLAGS=-Wl,-soname,libRmath.so.1 \ shared static ) make[1]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/nmath/standalone' (cd ../../include; /usr/bin/make Rmath.h) make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/include' make[2]: 'Rmath.h' is up to date. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/include' Copying source files make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/nmath/standalone' making mlutils.d from mlutils.c making d1mach.d from d1mach.c making i1mach.d from i1mach.c making fmax2.d from fmax2.c making fmin2.d from fmin2.c making fprec.d from fprec.c making fround.d from fround.c making ftrunc.d from ftrunc.c making sign.d from sign.c making fsign.d from fsign.c making imax2.d from imax2.c making imin2.d from imin2.c making chebyshev.d from chebyshev.c making log1p.d from log1p.c making lgammacor.d from lgammacor.c making gammalims.d from gammalims.c making stirlerr.d from stirlerr.c making bd0.d from bd0.c making gamma.d from gamma.c making lgamma.d from lgamma.c making gamma_cody.d from gamma_cody.c making beta.d from beta.c making lbeta.d from lbeta.c making polygamma.d from polygamma.c making cospi.d from cospi.c making bessel_i.d from bessel_i.c making bessel_j.d from bessel_j.c making bessel_k.d from bessel_k.c making bessel_y.d from bessel_y.c making choose.d from choose.c making snorm.d from snorm.c making sexp.d from sexp.c making dgamma.d from dgamma.c making pgamma.d from pgamma.c making qgamma.d from qgamma.c making rgamma.d from rgamma.c making dbeta.d from dbeta.c making pbeta.d from pbeta.c making qbeta.d from qbeta.c making rbeta.d from rbeta.c making dunif.d from dunif.c making punif.d from punif.c making qunif.d from qunif.c making runif.d from runif.c making dnorm.d from dnorm.c making pnorm.d from pnorm.c making qnorm.d from qnorm.c making rnorm.d from rnorm.c making dlnorm.d from dlnorm.c making plnorm.d from plnorm.c making qlnorm.d from qlnorm.c making rlnorm.d from rlnorm.c making df.d from df.c making pf.d from pf.c making qf.d from qf.c making rf.d from rf.c making dnf.d from dnf.c making dt.d from dt.c making pt.d from pt.c making qt.d from qt.c making rt.d from rt.c making dnt.d from dnt.c making dchisq.d from dchisq.c making pchisq.d from pchisq.c making qchisq.d from qchisq.c making rchisq.d from rchisq.c making rnchisq.d from rnchisq.c making dbinom.d from dbinom.c making pbinom.d from pbinom.c making qbinom.d from qbinom.c making rbinom.d from rbinom.c making rmultinom.d from rmultinom.c making dcauchy.d from dcauchy.c making pcauchy.d from pcauchy.c making qcauchy.d from qcauchy.c making rcauchy.d from rcauchy.c making dexp.d from dexp.c making pexp.d from pexp.c making qexp.d from qexp.c making rexp.d from rexp.c making dgeom.d from dgeom.c making pgeom.d from pgeom.c making qgeom.d from qgeom.c making rgeom.d from rgeom.c making dhyper.d from dhyper.c making phyper.d from phyper.c making qhyper.d from qhyper.c making rhyper.d from rhyper.c making dnbinom.d from dnbinom.c making pnbinom.d from pnbinom.c making qnbinom.d from qnbinom.c making qnbinom_mu.d from qnbinom_mu.c making rnbinom.d from rnbinom.c making dpois.d from dpois.c making ppois.d from ppois.c making qpois.d from qpois.c making rpois.d from rpois.c making dweibull.d from dweibull.c making pweibull.d from pweibull.c making qweibull.d from qweibull.c making rweibull.d from rweibull.c making dlogis.d from dlogis.c making plogis.d from plogis.c making qlogis.d from qlogis.c making rlogis.d from rlogis.c making dnchisq.d from dnchisq.c making pnchisq.d from pnchisq.c making qnchisq.d from qnchisq.c making dnbeta.d from dnbeta.c making pnbeta.d from pnbeta.c making qnbeta.d from qnbeta.c making pnf.d from pnf.c making pnt.d from pnt.c making qnf.d from qnf.c making qnt.d from qnt.c making ptukey.d from ptukey.c making qtukey.d from qtukey.c making toms708.d from toms708.c making wilcox.d from wilcox.c making signrank.d from signrank.c making std_unif.d from std_unif.c make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/nmath/standalone' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/nmath/standalone' gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c mlutils.c -o mlutils.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c d1mach.c -o d1mach.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c i1mach.c -o i1mach.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c fmax2.c -o fmax2.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c fmin2.c -o fmin2.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c fprec.c -o fprec.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c fround.c -o fround.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c ftrunc.c -o ftrunc.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c sign.c -o sign.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c fsign.c -o fsign.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c imax2.c -o imax2.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c imin2.c -o imin2.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c chebyshev.c -o chebyshev.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c log1p.c -o log1p.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c lgammacor.c -o lgammacor.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c gammalims.c -o gammalims.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c stirlerr.c -o stirlerr.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c bd0.c -o bd0.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c gamma.c -o gamma.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c lgamma.c -o lgamma.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c gamma_cody.c -o gamma_cody.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c beta.c -o beta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c lbeta.c -o lbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c polygamma.c -o polygamma.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c cospi.c -o cospi.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c bessel_i.c -o bessel_i.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c bessel_j.c -o bessel_j.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c bessel_k.c -o bessel_k.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c bessel_y.c -o bessel_y.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c choose.c -o choose.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c snorm.c -o snorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c sexp.c -o sexp.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dgamma.c -o dgamma.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pgamma.c -o pgamma.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qgamma.c -o qgamma.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rgamma.c -o rgamma.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dbeta.c -o dbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pbeta.c -o pbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qbeta.c -o qbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rbeta.c -o rbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dunif.c -o dunif.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c punif.c -o punif.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qunif.c -o qunif.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c runif.c -o runif.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dnorm.c -o dnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pnorm.c -o pnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnorm.c -o qnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rnorm.c -o rnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dlnorm.c -o dlnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c plnorm.c -o plnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qlnorm.c -o qlnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rlnorm.c -o rlnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c df.c -o df.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pf.c -o pf.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qf.c -o qf.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rf.c -o rf.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dnf.c -o dnf.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dt.c -o dt.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pt.c -o pt.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qt.c -o qt.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rt.c -o rt.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dnt.c -o dnt.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dchisq.c -o dchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pchisq.c -o pchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qchisq.c -o qchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rchisq.c -o rchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rnchisq.c -o rnchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dbinom.c -o dbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pbinom.c -o pbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qbinom.c -o qbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rbinom.c -o rbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rmultinom.c -o rmultinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dcauchy.c -o dcauchy.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pcauchy.c -o pcauchy.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qcauchy.c -o qcauchy.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rcauchy.c -o rcauchy.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dexp.c -o dexp.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pexp.c -o pexp.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qexp.c -o qexp.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rexp.c -o rexp.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dgeom.c -o dgeom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pgeom.c -o pgeom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qgeom.c -o qgeom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rgeom.c -o rgeom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dhyper.c -o dhyper.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c phyper.c -o phyper.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qhyper.c -o qhyper.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rhyper.c -o rhyper.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dnbinom.c -o dnbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pnbinom.c -o pnbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnbinom.c -o qnbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnbinom_mu.c -o qnbinom_mu.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rnbinom.c -o rnbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dpois.c -o dpois.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c ppois.c -o ppois.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qpois.c -o qpois.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rpois.c -o rpois.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dweibull.c -o dweibull.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pweibull.c -o pweibull.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qweibull.c -o qweibull.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rweibull.c -o rweibull.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dlogis.c -o dlogis.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c plogis.c -o plogis.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qlogis.c -o qlogis.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rlogis.c -o rlogis.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dnchisq.c -o dnchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pnchisq.c -o pnchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnchisq.c -o qnchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dnbeta.c -o dnbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pnbeta.c -o pnbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnbeta.c -o qnbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pnf.c -o pnf.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pnt.c -o pnt.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnf.c -o qnf.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnt.c -o qnt.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c ptukey.c -o ptukey.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qtukey.c -o qtukey.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c toms708.c -o toms708.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c wilcox.c -o wilcox.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c signrank.c -o signrank.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c std_unif.c -o std_unif.lo gcc -shared -fopenmp -Wl,-z,relro -o libRmath.so -Wl,-soname,libRmath.so.1 mlutils.lo d1mach.lo i1mach.lo fmax2.lo fmin2.lo fprec.lo fround.lo ftrunc.lo sign.lo fsign.lo imax2.lo imin2.lo chebyshev.lo log1p.lo lgammacor.lo gammalims.lo stirlerr.lo bd0.lo gamma.lo lgamma.lo gamma_cody.lo beta.lo lbeta.lo polygamma.lo cospi.lo bessel_i.lo bessel_j.lo bessel_k.lo bessel_y.lo choose.lo snorm.lo sexp.lo dgamma.lo pgamma.lo qgamma.lo rgamma.lo dbeta.lo pbeta.lo qbeta.lo rbeta.lo dunif.lo punif.lo qunif.lo runif.lo dnorm.lo pnorm.lo qnorm.lo rnorm.lo dlnorm.lo plnorm.lo qlnorm.lo rlnorm.lo df.lo pf.lo qf.lo rf.lo dnf.lo dt.lo pt.lo qt.lo rt.lo dnt.lo dchisq.lo pchisq.lo qchisq.lo rchisq.lo rnchisq.lo dbinom.lo pbinom.lo qbinom.lo rbinom.lo rmultinom.lo dcauchy.lo pcauchy.lo qcauchy.lo rcauchy.lo dexp.lo pexp.lo qexp.lo rexp.lo dgeom.lo pgeom.lo qgeom.lo rgeom.lo dhyper.lo phyper.lo qhyper.lo rhyper.lo dnbinom.lo pnbinom.lo qnbinom.lo qnbinom_mu.lo rnbinom.lo dpois.lo ppois.lo qpois.lo rpois.lo dweibull.lo pweibull.lo qweibull.lo rweibull.lo dlogis.lo plogis.lo qlogis.lo rlogis.lo dnchisq.lo pnchisq.lo qnchisq.lo dnbeta.lo pnbeta.lo qnbeta.lo pnf.lo pnt.lo qnf.lo qnt.lo ptukey.lo qtukey.lo toms708.lo wilcox.lo signrank.lo std_unif.lo -lm make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/nmath/standalone' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/nmath/standalone' gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c mlutils.c -o mlutils.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c d1mach.c -o d1mach.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c i1mach.c -o i1mach.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c fmax2.c -o fmax2.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c fmin2.c -o fmin2.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c fprec.c -o fprec.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c fround.c -o fround.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c ftrunc.c -o ftrunc.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c sign.c -o sign.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c fsign.c -o fsign.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c imax2.c -o imax2.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c imin2.c -o imin2.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c chebyshev.c -o chebyshev.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c log1p.c -o log1p.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c lgammacor.c -o lgammacor.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c gammalims.c -o gammalims.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c stirlerr.c -o stirlerr.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c bd0.c -o bd0.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c gamma.c -o gamma.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c lgamma.c -o lgamma.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c gamma_cody.c -o gamma_cody.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c beta.c -o beta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c lbeta.c -o lbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c polygamma.c -o polygamma.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c cospi.c -o cospi.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c bessel_i.c -o bessel_i.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c bessel_j.c -o bessel_j.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c bessel_k.c -o bessel_k.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c bessel_y.c -o bessel_y.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c choose.c -o choose.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c snorm.c -o snorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c sexp.c -o sexp.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dgamma.c -o dgamma.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pgamma.c -o pgamma.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qgamma.c -o qgamma.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rgamma.c -o rgamma.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dbeta.c -o dbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pbeta.c -o pbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qbeta.c -o qbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rbeta.c -o rbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dunif.c -o dunif.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c punif.c -o punif.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qunif.c -o qunif.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c runif.c -o runif.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dnorm.c -o dnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pnorm.c -o pnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnorm.c -o qnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rnorm.c -o rnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dlnorm.c -o dlnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c plnorm.c -o plnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qlnorm.c -o qlnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rlnorm.c -o rlnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c df.c -o df.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pf.c -o pf.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qf.c -o qf.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rf.c -o rf.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dnf.c -o dnf.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dt.c -o dt.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pt.c -o pt.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qt.c -o qt.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rt.c -o rt.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dnt.c -o dnt.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dchisq.c -o dchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pchisq.c -o pchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qchisq.c -o qchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rchisq.c -o rchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rnchisq.c -o rnchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dbinom.c -o dbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pbinom.c -o pbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qbinom.c -o qbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rbinom.c -o rbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rmultinom.c -o rmultinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dcauchy.c -o dcauchy.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pcauchy.c -o pcauchy.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qcauchy.c -o qcauchy.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rcauchy.c -o rcauchy.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dexp.c -o dexp.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pexp.c -o pexp.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qexp.c -o qexp.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rexp.c -o rexp.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dgeom.c -o dgeom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pgeom.c -o pgeom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qgeom.c -o qgeom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rgeom.c -o rgeom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dhyper.c -o dhyper.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c phyper.c -o phyper.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qhyper.c -o qhyper.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rhyper.c -o rhyper.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dnbinom.c -o dnbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pnbinom.c -o pnbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnbinom.c -o qnbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnbinom_mu.c -o qnbinom_mu.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rnbinom.c -o rnbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dpois.c -o dpois.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c ppois.c -o ppois.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qpois.c -o qpois.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rpois.c -o rpois.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dweibull.c -o dweibull.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pweibull.c -o pweibull.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qweibull.c -o qweibull.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rweibull.c -o rweibull.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dlogis.c -o dlogis.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c plogis.c -o plogis.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qlogis.c -o qlogis.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rlogis.c -o rlogis.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dnchisq.c -o dnchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pnchisq.c -o pnchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnchisq.c -o qnchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dnbeta.c -o dnbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pnbeta.c -o pnbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnbeta.c -o qnbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pnf.c -o pnf.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pnt.c -o pnt.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnf.c -o qnf.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnt.c -o qnt.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c ptukey.c -o ptukey.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qtukey.c -o qtukey.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c toms708.c -o toms708.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c wilcox.c -o wilcox.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c signrank.c -o signrank.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c std_unif.c -o std_unif.o ar -cr libRmath.a mlutils.o d1mach.o i1mach.o fmax2.o fmin2.o fprec.o fround.o ftrunc.o sign.o fsign.o imax2.o imin2.o chebyshev.o log1p.o lgammacor.o gammalims.o stirlerr.o bd0.o gamma.o lgamma.o gamma_cody.o beta.o lbeta.o polygamma.o cospi.o bessel_i.o bessel_j.o bessel_k.o bessel_y.o choose.o snorm.o sexp.o dgamma.o pgamma.o qgamma.o rgamma.o dbeta.o pbeta.o qbeta.o rbeta.o dunif.o punif.o qunif.o runif.o dnorm.o pnorm.o qnorm.o rnorm.o dlnorm.o plnorm.o qlnorm.o rlnorm.o df.o pf.o qf.o rf.o dnf.o dt.o pt.o qt.o rt.o dnt.o dchisq.o pchisq.o qchisq.o rchisq.o rnchisq.o dbinom.o pbinom.o qbinom.o rbinom.o rmultinom.o dcauchy.o pcauchy.o qcauchy.o rcauchy.o dexp.o pexp.o qexp.o rexp.o dgeom.o pgeom.o qgeom.o rgeom.o dhyper.o phyper.o qhyper.o rhyper.o dnbinom.o pnbinom.o qnbinom.o qnbinom_mu.o rnbinom.o dpois.o ppois.o qpois.o rpois.o dweibull.o pweibull.o qweibull.o rweibull.o dlogis.o plogis.o qlogis.o rlogis.o dnchisq.o pnchisq.o qnchisq.o dnbeta.o pnbeta.o qnbeta.o pnf.o pnt.o qnf.o qnt.o ptukey.o qtukey.o toms708.o wilcox.o signrank.o std_unif.o ranlib libRmath.a make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/nmath/standalone' make[1]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/nmath/standalone' R_GZIPCMD="/bin/gzip -n" \ /usr/bin/make docs R_CMD_BUILD_HELP_OPTS="--txt --example" make[1]: Entering directory '/build/reproducible-path/r-base-4.5.0' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/m4' make[2]: Nothing to be done for 'R'. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/m4' make[2]: Entering directory 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'/build/reproducible-path/r-base-4.5.0/src' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/scripts' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/scripts' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/scripts' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/scripts' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/include' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/include/R_ext' make[4]: Nothing to be done for 'R'. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/include/R_ext' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/include' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[5]: 'Makedeps' is up to date. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[5]: 'libtre.a' is up to date. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/appl' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/appl' make[4]: 'libappl.a' is up to date. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/appl' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/appl' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/nmath' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/nmath' make[4]: 'libnmath.a' is up to date. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/nmath' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/nmath' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/unix' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/unix' make[4]: 'libunix.a' is up to date. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/unix' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/unix' gcc -std=gnu23 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -DR_HOME='"/build/reproducible-path/r-base-4.5.0"' \ -o Rscript ./Rscript.c make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/unix' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/unix' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' /build/reproducible-path/r-base-4.5.0/lib/libR.so is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' /build/reproducible-path/r-base-4.5.0/bin/exec/R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/internet' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/internet' make[5]: 'internet.so' is up to date. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/internet' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/internet' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/lapack' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/lapack' make[5]: 'lapack.so' is up to date. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/lapack' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/lapack' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' make[5]: 'R_X11.so' is up to date. make[5]: 'R_de.so' is up to date. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' /build/reproducible-path/r-base-4.5.0/modules/R_X11.so is unchanged /build/reproducible-path/r-base-4.5.0/modules/R_de.so is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/profile' building system startup profile make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/profile' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/translations' building package 'translations' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/translations' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/translations' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/translations' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/base' building package 'base' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/base' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/base' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/base' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' building package 'tools' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' all.R is unchanged make[5]: '../../../library/tools/wre.txt' is up to date. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools/src' ../../../../library/tools/libs/tools.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' installing 'sysdata.rda' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' building package 'compiler' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/base' make[4]: Nothing to be done for 'mklazycomp'. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/base' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[4]: Nothing to be done for 'mklazycomp'. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' building package 'utils' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' all.R is unchanged make[5]: Nothing to be done for 'iconvlist'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils/src' ../../../../library/utils/libs/utils.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' installing 'sysdata.rda' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' building package 'grDevices' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src' ../../../../library/grDevices/libs/grDevices.so is unchanged make[8]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' make[9]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' make[10]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' make[10]: 'cairo.so' is up to date. make[10]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' make[9]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' make[8]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' building package 'graphics' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics/src' ../../../../library/graphics/libs/graphics.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' building package 'stats' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats/src' ../../../../library/stats/libs/stats.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/datasets' building package 'datasets' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/datasets' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/datasets' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/datasets' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' building package 'methods' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods/src' ../../../../library/methods/libs/methods.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' make[5]: Nothing to be done for 'RfilesLazy'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' building package 'grid' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid/src' ../../../../library/grid/libs/grid.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' building package 'splines' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines/src' ../../../../library/splines/libs/splines.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' building package 'stats4' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' building package 'tcltk' all.R is unchanged make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk/src' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk/src' ../../../../library/tcltk/libs/tcltk.so is unchanged make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk/src' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' building package 'parallel' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel/src' ../../../../library/parallel/libs/parallel.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/base' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/base' installing parsed NAMESPACE files make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/tests' make[2]: Nothing to be done for 'R'. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/tests' you should 'make docs' now ... make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/doc' creating doc/NEWS creating doc/NEWS.pdf make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/doc/manual' creating doc/manual/R-FAQ.html creating doc/manual/version.texi creating doc/manual/R-admin.html creating doc/manual/R-data.html creating doc/manual/R-exts.html creating doc/manual/R-intro.html creating doc/manual/R-ints.html creating doc/manual/R-lang.html make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/doc/html' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/doc/html' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/doc/manual' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/doc' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library' installing parsed Rd make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library' base stats utils methods graphics grDevices datasets grid tools tcltk splines stats4 compiler parallel make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library' building/updating package metadata ... make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library' writing package indices make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library' make[1]: Leaving directory '/build/reproducible-path/r-base-4.5.0' /usr/bin/make javaconf make[1]: Entering directory '/build/reproducible-path/r-base-4.5.0' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/m4' make[2]: Nothing to be done for 'R'. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/m4' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/tools' make[2]: Nothing to be done for 'R'. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/tools' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/doc' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/doc/html' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/doc/html' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/doc/manual' make[3]: Nothing to be done for 'R'. make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/doc/manual' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/doc' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/etc' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/etc' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/share' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/share' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/src' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/scripts' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/scripts' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/scripts' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/scripts' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/include' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/include/R_ext' make[4]: Nothing to be done for 'R'. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/include/R_ext' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/include' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[5]: 'Makedeps' is up to date. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[5]: 'libtre.a' is up to date. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/appl' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/appl' make[4]: 'libappl.a' is up to date. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/appl' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/appl' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/nmath' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/nmath' make[4]: 'libnmath.a' is up to date. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/nmath' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/nmath' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/unix' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/unix' make[4]: 'libunix.a' is up to date. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/unix' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/unix' gcc -std=gnu23 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -DR_HOME='"/build/reproducible-path/r-base-4.5.0"' \ -o Rscript ./Rscript.c make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/unix' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/unix' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' /build/reproducible-path/r-base-4.5.0/lib/libR.so is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' /build/reproducible-path/r-base-4.5.0/bin/exec/R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/internet' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/internet' make[5]: 'internet.so' is up to date. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/internet' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/internet' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/lapack' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/lapack' make[5]: 'lapack.so' is up to date. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/lapack' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/lapack' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' make[5]: 'R_X11.so' is up to date. make[5]: 'R_de.so' is up to date. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' /build/reproducible-path/r-base-4.5.0/modules/R_X11.so is unchanged /build/reproducible-path/r-base-4.5.0/modules/R_de.so is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/profile' building system startup profile make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/profile' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/translations' building package 'translations' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/translations' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/translations' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/translations' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/base' building package 'base' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/base' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/base' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/base' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' building package 'tools' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' all.R is unchanged make[5]: '../../../library/tools/wre.txt' is up to date. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools/src' ../../../../library/tools/libs/tools.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' installing 'sysdata.rda' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' building package 'compiler' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/base' make[4]: Nothing to be done for 'mklazycomp'. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/base' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[4]: Nothing to be done for 'mklazycomp'. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' building package 'utils' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' all.R is unchanged make[5]: Nothing to be done for 'iconvlist'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils/src' ../../../../library/utils/libs/utils.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' installing 'sysdata.rda' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' building package 'grDevices' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src' ../../../../library/grDevices/libs/grDevices.so is unchanged make[8]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' make[9]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' make[10]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' make[10]: 'cairo.so' is up to date. make[10]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' make[9]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' make[8]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' building package 'graphics' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics/src' ../../../../library/graphics/libs/graphics.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' building package 'stats' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats/src' ../../../../library/stats/libs/stats.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/datasets' building package 'datasets' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/datasets' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/datasets' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/datasets' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' building package 'methods' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods/src' ../../../../library/methods/libs/methods.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' make[5]: Nothing to be done for 'RfilesLazy'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' building package 'grid' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid/src' ../../../../library/grid/libs/grid.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' building package 'splines' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines/src' ../../../../library/splines/libs/splines.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' building package 'stats4' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' building package 'tcltk' all.R is unchanged make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk/src' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk/src' ../../../../library/tcltk/libs/tcltk.so is unchanged make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk/src' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' building package 'parallel' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel/src' ../../../../library/parallel/libs/parallel.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/base' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/base' installing parsed NAMESPACE files make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/tests' make[2]: Nothing to be done for 'R'. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/tests' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0' configuring Java ... Java interpreter : /usr/lib/jvm/default-java/bin/java Java version : 21.0.7 Java home path : /usr/lib/jvm/default-java Java compiler : /usr/lib/jvm/default-java/bin/javac Java headers gen.: Java archive tool: /usr/lib/jvm/default-java/bin/jar trying to compile and link a JNI program detected JNI cpp flags : -I$(JAVA_HOME)/include -I$(JAVA_HOME)/include/linux detected JNI linker flags : -L$(JAVA_HOME)/lib/server -ljvm using C compiler: ‘gcc (Debian 14.2.0-19) 14.2.0’ make[3]: Entering directory '/tmp/Rjavareconf.G2JQZy' gcc -std=gnu23 -I"/build/reproducible-path/r-base-4.5.0/include" -DNDEBUG -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -c conftest.c -o conftest.o gcc -std=gnu23 -shared -L/build/reproducible-path/r-base-4.5.0/lib -Wl,-z,relro -o conftest.so conftest.o -L/usr/lib/jvm/default-java/lib/server -ljvm -L/build/reproducible-path/r-base-4.5.0/lib -lR make[3]: Leaving directory '/tmp/Rjavareconf.G2JQZy' JAVA_HOME : /usr/lib/jvm/default-java Java library path: $(JAVA_HOME)/lib/server JNI cpp flags : -I$(JAVA_HOME)/include -I$(JAVA_HOME)/include/linux JNI linker flags : -L$(JAVA_HOME)/lib/server -ljvm Updating Java configuration in /build/reproducible-path/r-base-4.5.0 Done. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0' make[1]: Leaving directory '/build/reproducible-path/r-base-4.5.0' touch make-arch-stamp *** install-arch *** dh_testdir dh_testroot dh_prep -a dh_installdirs -A /build/reproducible-path/r-base-4.5.0/debian/r-base-core /usr/bin/make DESTDIR=/build/reproducible-path/r-base-4.5.0/debian/r-base-core install make[1]: Entering directory '/build/reproducible-path/r-base-4.5.0' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/m4' make[2]: Nothing to be done for 'install'. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/m4' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/tools' make[2]: Nothing to be done for 'install'. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/tools' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/doc' installing doc ... mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/doc mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/man/man1 make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/doc/html' installing doc/html ... mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/doc/html make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/doc/html' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/doc/manual' installing doc/manual ... mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/doc/manual mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/doc/manual/images make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/doc/manual' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/doc' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/etc' mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/lib/R/etc installing etc ... make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/etc' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/share' installing share ... mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/share mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/share/R mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/share/dictionaries mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/share/encodings mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/share/java mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/share/licenses mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/share/make mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/share/Rd mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/share/Rd/macros mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/share/sh mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/share/texmf mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/share/texmf/bibtex/bib mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/share/texmf/bibtex/bst mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/share/texmf/tex/latex make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/share' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/src' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/scripts' mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/lib/R/bin make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/scripts' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/include' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/include/R_ext' mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/include/R_ext make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/include/R_ext' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/include' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra/blas' make[4]: Nothing to be done for 'install'. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra/blas' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[4]: Nothing to be done for 'install'. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra/tzone' make[4]: Nothing to be done for 'install'. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra/tzone' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra/xdr' make[4]: Nothing to be done for 'install'. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra/xdr' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra/intl' make[4]: Nothing to be done for 'install'. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra/intl' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/appl' make[3]: Nothing to be done for 'install'. make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/appl' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/nmath' make[3]: Nothing to be done for 'install'. make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/nmath' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/unix' gcc -std=gnu23 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -DR_HOME='"/usr/lib/R"' \ -o Rscript ./Rscript.c mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/lib/pkgconfig make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/unix' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/lib/R/bin/exec make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/lib/R/lib make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/internet' mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/lib/R/modules make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/internet' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/lapack' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/lapack' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library' mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/lib/R/library installing packages ... building HTML index ... make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/tests' make[2]: Nothing to be done for 'install'. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/tests' make[1]: Leaving directory '/build/reproducible-path/r-base-4.5.0' (cd src/unix; \ rm -vf Rscript /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/bin/Rscript; \ /usr/bin/make CFLAGS="`DEB_BUILD_MAINT_OPTIONS=optimize=-lto dpkg-buildflags --get CXXFLAGS` -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT" \ CXXFLAGS="`DEB_BUILD_MAINT_OPTIONS=optimize=-lto dpkg-buildflags --get CXXFLAGS` -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT" \ FFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -mbranch-protection=standard -D_REENTRANT" \ CC=gcc \ CXX=g++ \ F77=gfortran \ RHOME=/usr/lib/R \ DESTDIR=/build/reproducible-path/r-base-4.5.0/debian/r-base-core \ install-Rscript ) removed 'Rscript' removed '/build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/bin/Rscript' make[1]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/unix' gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/unix=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -Wl,-z,relro -DR_HOME='"/usr/lib/R"' \ -o Rscript ./Rscript.c make[1]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/unix' #ls -ltr /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/bin/ #strings src/unix/Rscript cp -vax src/unix/Rscript /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/bin/ 'src/unix/Rscript' -> '/build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/bin/Rscript' #ls -ltr /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/bin/ #strings /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/bin/Rscript (cd src/nmath/standalone; \ /usr/bin/make DESTDIR=/build/reproducible-path/r-base-4.5.0/debian/r-base-core install ) make[1]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/nmath/standalone' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/include' make[2]: 'Rmath.h' is up to date. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/include' /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/include/Rmath.h is unchanged make[1]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/nmath/standalone' chmod a+x /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/share/sh/echo.sh rm -v /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/lib/R/COPYING removed '/build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/lib/R/COPYING' (cd /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/lib/R/; \ ln -s ../../share/common-licenses/GPL-2 COPYING) rm -v /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/doc/COPYING removed '/build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/doc/COPYING' (cd /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/doc; \ ln -s ../../../share/common-licenses/GPL-2 COPYING) (cd /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/texmf/tex/latex && \ ln -s ../../../R/share/texmf R) dh_movefiles --sourcedir=debian/r-base-core -pr-doc-html dh_movefiles --sourcedir=debian/r-base-core -pr-base-html make prefix=/build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr \ rdocdir=/build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/doc \ install-pdf make[1]: Entering directory '/build/reproducible-path/r-base-4.5.0' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/doc/manual' creating doc/manual/version.tex collecting LaTeX docs for package 'base' ... Converting parsed Rd's to LaTeX ............................................ collecting LaTeX docs for package 'tools' ... Converting parsed Rd's to LaTeX ....... collecting LaTeX docs for package 'utils' ... Converting parsed Rd's to LaTeX ................ collecting LaTeX docs for package 'grDevices' ... Converting parsed Rd's to LaTeX ....... collecting LaTeX docs for package 'graphics' ... Converting parsed Rd's to LaTeX ....... collecting LaTeX docs for package 'stats' ... Converting parsed Rd's to LaTeX ............................... collecting LaTeX docs for package 'datasets' ... Converting parsed Rd's to LaTeX ........ collecting LaTeX docs for package 'methods' ... Converting parsed Rd's to LaTeX ........ collecting LaTeX docs for package 'grid' ... Converting parsed Rd's to LaTeX .......... collecting LaTeX docs for package 'splines' ... Converting parsed Rd's to LaTeX . collecting LaTeX docs for package 'stats4' ... Converting parsed Rd's to LaTeX . collecting LaTeX docs for package 'tcltk' ... Converting parsed Rd's to LaTeX . collecting LaTeX docs for package 'compiler' ... Converting parsed Rd's to LaTeX collecting LaTeX docs for package 'parallel' ... Converting parsed Rd's to LaTeX . PDF/LaTeX documentation: full reference index ... 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(/usr/share/texlive/texmf-dist/tex/latex/inconsolata/t1zi4.fd) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) (/usr/share/texlive/texmf-dist/tex/latex/jknapltx/ursfs.fd) [1{/usr/share/texlive/texmf-dist/fonts/enc/dvips/inconsolata/i4-t1-0.enc}] [2] Underfull \hbox (badness 6252) in paragraph at lines 149--157 []\T1/ptm/m/n/10 a small pos-i-tive floating-point num-ber []\T1/zi4/m/n/10 x [ ]\T1/ptm/m/n/10 such that []\T1/zi4/m/n/10 1 - x != 1[]\T1/ptm/m/n/10 . It Underfull \hbox (badness 10000) in paragraph at lines 149--157 \T1/ptm/m/n/10 equals []\T1/zi4/m/n/10 double.base ^ double.neg.ulp.digits []\T 1/ptm/m/n/10 if []\T1/zi4/m/n/10 double.base Underfull \hbox (badness 10000) in paragraph at lines 149--157 []\T1/ptm/m/n/10 is 2 or []\T1/zi4/m/n/10 double.rounding []\T1/ptm/m/n/10 is 0 ; oth-er-wise, it is []\T1/zi4/m/n/10 (double.base Underfull \hbox (badness 10000) in paragraph at lines 149--157 \T1/zi4/m/n/10 ^ double.neg.ulp.digits) / 2[]\T1/ptm/m/n/10 . Nor-mally []\T1/z i4/m/n/10 1.110223e-16[]\T1/ptm/m/n/10 . As Underfull \hbox (badness 4995) in paragraph at lines 149--157 []\T1/zi4/m/n/10 double.neg.ulp.digits []\T1/ptm/m/n/10 is bounded be-low by [] \T1/zi4/m/n/10 -(double.digits + 3)[]\T1/ptm/m/n/10 , [3] [4] [5] Underfull \hbox (badness 1178) in paragraph at lines 337--340 []\T1/ptm/m/n/10 character string, the pre-ferred set-ting for [][][]\T1/zi4/m/ n/10 options[][][]("pkgType")[]\T1/ptm/m/n/10 . Val-ues [6] [7] [8] [9] Underfull \hbox (badness 2556) in paragraph at lines 572--578 []\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `[] \T1/zi4/m/n/10 insertions[]\T1/ptm/m/n/10 ', [10] [11] [12] (/usr/share/texlive/texmf-dist/tex/latex/inconsolata/ts1zi4.fd) [13{/usr/share/texlive/texmf-dist/fonts/enc/dvips/inconsolata/i4-ts1.enc}] [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] [24] [25] [26] [27] [28] [29] [30] Underfull \vbox (badness 3803) has occurred while \output is active [31] [32] [33] [34] [35] [36] Overfull \hbox (26.27782pt too wide) in paragraph at lines 2285--2285 []\T1/zi4/m/n/9 ## http://www.mathworks.de/de/help/matlab/matlab_prog/represen t-date-and-times-in-MATLAB.html)[] [37] [38] [39] [40] [41] [42] Overfull \hbox (20.69484pt too wide) in paragraph at lines 2639--2639 []\T1/zi4/m/n/9 if(file.exists(tab)) { # typically on Windows; on Linux when \TS1/cmtt/m/n/9 `\T1/zi4/m/n/9 configure --with-internal-tzcode\TS1/cmtt/m/n/9 `[] [43] [44] [45] [46] [47] Underfull \hbox (badness 1721) in paragraph at lines 2957--2961 [][][]\T1/zi4/m/n/10 assign[][][] []\T1/ptm/m/n/10 (and its in-verse [][][]\T1/ zi4/m/n/10 get[][][][]\T1/ptm/m/n/10 ), for ``sub-assign-ment'' such as []\T1/z i4/m/n/10 x[i] <- v[]\T1/ptm/m/n/10 , see [][][]\T1/zi4/m/n/10 [<-[][][][]\T1/p tm/m/n/10 ; fur-ther, [48] [49] [50] [51] [52] [53] [54] Underfull \hbox (badness 2538) in paragraph at lines 3443--3446 []\T1/zi4/m/n/10 unCfillPOSIXlt(x) []\T1/ptm/m/n/10 is a fast [][]prim-i-tive[] [][] ver-sion of []\T1/zi4/m/n/10 balancePOSIXlt(x, fill.only=TRUE, [55] [56] [57] [58] [59] Underfull \vbox (badness 3803) has occurred while \output is active [60] [61] [62] [63] [64] [65] [66] [67] Underfull \hbox (badness 10000) in paragraph at lines 4239--4241 []\T1/ptm/m/n/10 The num-ber of lines printed for the de-parsed call can be lim -ited by set-ting [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] Underfull \hbox (badness 2521) in paragraph at lines 5588--5590 []\T1/ptm/m/n/10 a char-ac-ter vec-tor, or an ob-ject that can be co-erced to c har-ac-ter by [89] [90] [91] [92] [93] [94] [95] [96] [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] [108] Overfull \hbox (5.27168pt too wide) in paragraph at lines 6871--6871 []\T1/zi4/m/n/9 stopifnot(is.na(NpNA), is.na(NA_complex_), is.na(Re(NA_complex _)), is.na(Im(NA_complex_)))[] [109] [110] [111] [112] [113] [114] [115] [116] Underfull \hbox (badness 2253) in paragraph at lines 7482--7487 []\T1/zi4/m/n/10 file[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 pipe[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 fifo[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 url[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 gzfile[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 bzfile[]\T1/ptm/m/n /10 , []\T1/zi4/m/n/10 xzfile[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 zstdfile[]\T1/ ptm/m/n/10 , []\T1/zi4/m/n/10 unz[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 socketConn ection[]\T1/ptm/m/n/10 , Underfull \hbox (badness 2846) in paragraph at lines 7482--7487 []\T1/zi4/m/n/10 socketAccept []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 serverSocke t []\T1/ptm/m/n/10 re-turn a con-nec-tion ob-ject which in-her-its from class [117] [118] [119] [120] [121] Underfull \hbox (badness 2261) in paragraph at lines 7798--7803 \T1/zi4/m/n/10 / / github . com / astrand / xclip$[][]\T1/ptm/m/n/10 ) or []\T1 /zi4/m/n/10 xsel []\T1/ptm/m/n/10 ([][]$\T1/zi4/m/n/10 https : / / www . vergen et . net / ~conrad / software / [122] [123] Underfull \vbox (badness 10000) has occurred while \output is active [124] [125] [126] [127] [128] [129] [130] [131] [132] Underfull \hbox (badness 2096) in paragraph at lines 8531--8535 \T1/zi4/m/n/10 status _ codes$[][] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / List _ of _ FTP _ server _ return _ codes$ [][]\T1/ptm/m/n/10 . [133] [134] Underfull \hbox (badness 2351) in paragraph at lines 8646--8649 [][][]\T1/zi4/m/n/10 split[][][] []\T1/ptm/m/n/10 for split-ting a vari-able ac -cord-ing to a group fac-tor; [][][]\T1/zi4/m/n/10 factor[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 tabulate[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 t able[][][][]\T1/ptm/m/n/10 , [135] [136] [137] [138] [139] Underfull \hbox (badness 4479) in paragraph at lines 8963--8974 [][][]\T1/zi4/m/n/10 I[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 plot.data.f rame[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 print.data.frame[][][][]\T1/p tm/m/n/10 , [][][]\T1/zi4/m/n/10 row.names[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/n/10 names[][][] []\T1/ptm/m/n/10 (for the col-umn names), [140] [141] [142] [143] [144] [145] Underfull \hbox (badness 1629) in paragraph at lines 9394--9406 []\T1/ptm/m/n/10 A few times have spe-cific is-sues. First, the leap sec-onds a re ig-nored, and real times Underfull \hbox (badness 2875) in paragraph at lines 9394--9406 []\T1/zi4/m/n/10 NA[]\T1/ptm/m/n/10 , and hence []\T1/zi4/m/n/10 as.POSIXct("19 69-12-31 23:59:59", tz = "UTC") []\T1/ptm/m/n/10 will give []\T1/zi4/m/n/10 "19 69-12-31 [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157] [158] Underfull \hbox (badness 1178) in paragraph at lines 10265--10269 []\T1/ptm/m/n/10 If true, [][][]\T1/zi4/m/n/10 list[][][][]\T1/ptm/m/n/10 s and atomic vec-tors with non-[][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 names (see [][][]\T1/zi4/m/n/10 names[][][][]\T1/ptm/m/n/10 ) are de- [159] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188] [189] [190] [191] [192] [193] [194] [195] Underfull \hbox (badness 2744) in paragraph at lines 12613--12615 []\T1/ptm/m/n/10 Changing the cur-rent en-cod-ing from a run-ning R ses-sion ma y lead to con-fu-sion (see [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] [223] [224] [225] [226] [227] Underfull \hbox (badness 2253) in paragraph at lines 14821--14823 []\T1/ptm/m/n/10 character vec-tors con-tain-ing file paths. Tilde-expansion is done: see [228] Underfull \hbox (badness 1490) in paragraph at lines 14856--14859 []\T1/ptm/m/n/10 Junction points and sym-bolic links are fol-lowed, so in-for-m a-tion is given about the [229] Underfull \hbox (badness 1565) in paragraph at lines 14942--14946 [][][]\T1/zi4/m/n/10 Sys.readlink[][][] []\T1/ptm/m/n/10 to find out about sym- bolic links, [][][]\T1/zi4/m/n/10 files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m /n/10 file.access[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 list.files[][][] []\T1/ptm/m/n/10 , and [230] Underfull \hbox (badness 4927) in paragraph at lines 14993--14995 []\T1/ptm/m/n/10 It can also be used for en-vi-ron-ment paths such as []\T1/zi4 /m/n/10 PATH []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 R_LIBS []\T1/ptm/m/n/10 with []\T1/zi4/m/n/10 fsep = [231] [232] Underfull \hbox (badness 1466) in paragraph at lines 15144--15147 []\T1/ptm/m/n/10 character vec-tors, con-tain-ing file names or paths. For []\T 1/zi4/m/n/10 file.copy []\T1/ptm/m/n/10 and [233] [234] Underfull \hbox (badness 10000) in paragraph at lines 15275--15279 [][][]\T1/zi4/m/n/10 file.info[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 fil e.access[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.path[][][][]\T1/ptm/ m/n/10 , [][][]\T1/zi4/m/n/10 file.show[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m /n/10 list.files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 unlink[][][][]\T1 /ptm/m/n/10 , [][][]\T1/zi4/m/n/10 basename[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 15286--15289 [][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Hard _ link$[][ ] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wik i / [235] [236] [237] [238] [239] Underfull \hbox (badness 3965) in paragraph at lines 15590--15594 []\T1/ptm/m/n/10 This is the same com-pu-ta-tion as for the em-pir-i-cal dis-tr i-bu-tion func-tion, and in-deed, [240] [241] [242] [243] [244] [245] [246] [247] Underfull \hbox (badness 5260) in paragraph at lines 16099--16099 []\T1/zi4/m/n/10 big.mark[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 big.interval[]\T1/ ptm/m/n/10 , []\T1/zi4/m/n/10 small.mark[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 sma ll.interval[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 decimal.mark[]\T1/ptm/m/n/10 , [248] [249] [250] [251] Underfull \hbox (badness 4429) in paragraph at lines 16389--16392 []\T1/ptm/m/n/10 an atomic nu-mer-i-cal or char-ac-ter ob-ject, pos-si-bly [][] []\T1/zi4/m/n/10 complex[][][] []\T1/ptm/m/n/10 only for [252] [253] Underfull \hbox (badness 10000) in paragraph at lines 16496--16498 []\T1/ptm/m/n/10 This works via []\T1/zi4/m/n/10 prettyNum()[]\T1/ptm/m/n/10 , which calls []\T1/zi4/m/n/10 .format.zeros(*, [254] Underfull \hbox (badness 2035) in paragraph at lines 16569--16573 []\T1/ptm/m/n/10 The de-fault for []\T1/zi4/m/n/10 decimal.mark []\T1/ptm/m/n/1 0 in []\T1/zi4/m/n/10 formatC() []\T1/ptm/m/n/10 was changed in \T1/phv/m/n/10 R \T1/ptm/m/n/10 3.2.0: for use within [255] Underfull \vbox (badness 10000) has occurred while \output is active [256] [257] [258] [259] [260] [261] [262] [263] [264] Underfull \hbox (badness 2452) in paragraph at lines 17192--17196 []\T1/zi4/m/n/10 gctorture2 []\T1/ptm/m/n/10 can also be in-voked via en-vi-ron -ment vari-ables at the start of the \T1/phv/m/n/10 R \T1/ptm/m/n/10 ses- Underfull \hbox (badness 1147) in paragraph at lines 17192--17196 \T1/ptm/m/n/10 sion. []\T1/zi4/m/n/10 R_GCTORTURE []\T1/ptm/m/n/10 cor-re-spond s to the []\T1/zi4/m/n/10 step []\T1/ptm/m/n/10 ar-gu-ment, []\T1/zi4/m/n/10 R_ GCTORTURE_WAIT []\T1/ptm/m/n/10 to []\T1/zi4/m/n/10 wait[]\T1/ptm/m/n/10 , and [265] [266] [267] Underfull \hbox (badness 1092) in paragraph at lines 17384--17389 [][][]\T1/zi4/m/n/10 library.dynam[][][][]\T1/ptm/m/n/10 , or can be found af-t er the DLL has been loaded us-ing [268] [269] [270] [271] Underfull \hbox (badness 6741) in paragraph at lines 17637--17641 \T1/ptm/m/n/10 Additionally, the list will have an ad-di-tional class, be-ing [ ]\T1/zi4/m/n/10 CRoutine[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 CallRoutine[]\T1/pt m/m/n/10 , [272] [273] [274] [275] [276] [277] [278] [279] [280] [281] [282] [283] Underfull \vbox (badness 10000) has occurred while \output is active [284] [285] [286] [287] [288] [289] [290] [291] [292] [293] Underfull \hbox (badness 1769) in paragraph at lines 19142--19145 []\T1/ptm/m/n/10 a char-ac-ter vec-tor, or an ob-ject to be con-verted to a cha r-ac-ter vec-tor [294] [295] [296] [297] [298] Underfull \hbox (badness 10000) in paragraph at lines 19451--19453 []\T1/ptm/m/n/10 the `root' col-la-tion: see [][]$\T1/zi4/m/n/10 https : / / ww w . unicode . org / reports / tr35 / Underfull \hbox (badness 2088) in paragraph at lines 19457--19466 []\T1/ptm/m/n/10 For the spec-i-fi-ca-tions of `real' ICU lo-cales, see [][]$\T 1/zi4/m/n/10 https : / / unicode-[]org . github . io / icu / [299] [300] [301] [302] [303] [304] [305] [306] [307] [308] Underfull \hbox (badness 1442) in paragraph at lines 20065--20067 []\T1/ptm/m/n/10 the choice of de-fault graph-ics de-vice launched when needed and by [][][]\T1/zi4/m/n/10 dev.new[][][][]\T1/ptm/m/n/10 : see [309] Underfull \hbox (badness 2452) in paragraph at lines 20161--20187 [][][]\T1/zi4/m/n/10 as.character[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.complex[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.double[][][][]\T1/pt m/m/n/10 , [][][]\T1/zi4/m/n/10 as.integer[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/n/10 as.logical[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.raw[][][][] \T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.vector[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 5726) in paragraph at lines 20161--20187 [][][]\T1/zi4/m/n/10 as.call[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.en vironment[][][] [][]is.array[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.ma trix[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.na[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 anyNA[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.nan [][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.finite[][][] [310] [311] [312] [313] [314] [315] Underfull \hbox (badness 1248) in paragraph at lines 20559--20562 []\T1/zi4/m/n/10 is.atomic []\T1/ptm/m/n/10 is true for the [][]atomic[][][] ty pes ([]\T1/zi4/m/n/10 "logical"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "integer"[]\ T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "numeric"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 " complex"[]\T1/ptm/m/n/10 , [316] [317] [318] [319] [320] Underfull \hbox (badness 4739) in paragraph at lines 20828--20830 []\T1/ptm/m/n/10 numeric scalar >= 0. Smaller dif-fer-ences are not con-sid-ere d, see [321] [322] [323] [324] [325] Underfull \vbox (badness 3803) has occurred while \output is active [326] [327] [328] [329] [330] [331] [332] [333] [334] [335] [336] [337] [338] [339] Underfull \hbox (badness 2469) in paragraph at lines 22003--22008 []\T1/ptm/m/n/10 In late 2017 a []\T1/zi4/m/n/10 libcurl []\T1/ptm/m/n/10 in-st al-la-tion was seen di-vided into two li-braries, []\T1/zi4/m/n/10 libcurl []\T 1/ptm/m/n/10 and [340] [341] Underfull \hbox (badness 1675) in paragraph at lines 22090--22099 []\T1/ptm/m/n/10 At startup, the li-brary search path is ini-tial-ized from the en-vi-ron-ment vari-ables []\T1/zi4/m/n/10 R_LIBS[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3189) in paragraph at lines 22100--22113 []\T1/ptm/m/n/10 First, []\T1/zi4/m/n/10 .Library.site []\T1/ptm/m/n/10 is ini- tial-ized from []\T1/zi4/m/n/10 R_LIBS_SITE[]\T1/ptm/m/n/10 . If this is un-set or empty, the Underfull \hbox (badness 10000) in paragraph at lines 22148--22151 []\T1/zi4/m/n/10 LOCALAPPDATA []\T1/ptm/m/n/10 (usu-ally []\T1/zi4/m/n/10 C:\Us ers\username\AppData\Local[]\T1/ptm/m/n/10 ) on Win-dows is a hid- Underfull \hbox (badness 4752) in paragraph at lines 22148--22151 \T1/ptm/m/n/10 den di-rec-tory and may not be viewed by some soft-ware. It may be opened by [342] [343] Underfull \hbox (badness 1014) in paragraph at lines 22282--22287 []\T1/ptm/m/n/10 Normally []\T1/zi4/m/n/10 library []\T1/ptm/m/n/10 re-turns (i n-vis-i-bly) the list of at-tached pack-ages, but []\T1/zi4/m/n/10 TRUE []\T1/p tm/m/n/10 or []\T1/zi4/m/n/10 FALSE []\T1/ptm/m/n/10 if [344] [345] [346] [347] [348] [349] [350] [351] [352] [353] [354] [355] [356] Underfull \hbox (badness 1264) in paragraph at lines 23129--23137 []\T1/ptm/m/n/10 character string. The fol-low-ing cat-e-gories should al-ways be sup-ported: [357] Underfull \hbox (badness 4441) in paragraph at lines 23164--23167 []\T1/ptm/m/n/10 Note that set-ting cat-e-gory []\T1/zi4/m/n/10 "LC_ALL" []\T1/ ptm/m/n/10 sets only cat-e-gories []\T1/zi4/m/n/10 "LC_COLLATE"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "LC_CTYPE"[]\T1/ptm/m/n/10 , [358] [359] [360] [361] [362] [363] [364] [365] [366] [367] [368] [369] Underfull \hbox (badness 5231) in paragraph at lines 23984--23986 []\T1/ptm/m/n/10 The al-go-rithm used by []\T1/zi4/m/n/10 make.unique []\T1/ptm /m/n/10 has the prop-erty that []\T1/zi4/m/n/10 make.unique(c(A, B)) == [370] [371] [372] [373] [374] [375] [376] [377] [378] [379] [380] [381] [382] [383] [384] [385] [386] [387] Underfull \hbox (badness 6380) in paragraph at lines 25098--25104 [][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Data _ compress ion$[][] \T1/ptm/m/n/10 for back-ground on data com-pres- Underfull \hbox (badness 1472) in paragraph at lines 25098--25104 [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Bzip2$[][]\T1/ptm /m/n/10 , and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / XZ _ Utils$[][] [388] [389] [390] [391] [392] [393] [394] [395] Underfull \hbox (badness 2790) in paragraph at lines 25610--25613 []\T1/zi4/m/n/10 packageStartupMessage []\T1/ptm/m/n/10 is a vari-ant whose mes -sages can be sup-pressed sep-a-rately by Underfull \hbox (badness 1571) in paragraph at lines 25610--25613 []\T1/zi4/m/n/10 suppressPackageStartupMessages[]\T1/ptm/m/n/10 . (They are sti ll mes-sages, so can be sup-pressed by [396] [397] [398] [399] [400] Underfull \hbox (badness 1194) in paragraph at lines 25938--25941 []\T1/ptm/m/n/10 The de-fault method for []\T1/zi4/m/n/10 anyNA []\T1/ptm/m/n/1 0 han-dles atomic vec-tors with-out a class and []\T1/zi4/m/n/10 NULL[]\T1/ptm/ m/n/10 . It calls [401] [402] [403] Underfull \hbox (badness 2368) in paragraph at lines 26145--26151 []\T1/ptm/m/n/10 For an [][][]\T1/zi4/m/n/10 environment[][][] env[]\T1/ptm/m/n /10 , []\T1/zi4/m/n/10 names(env) []\T1/ptm/m/n/10 gives the names of the cor-r e-spond-ing list, i.e., [404] [405] [406] [407] [408] [409] Underfull \hbox (badness 10000) in paragraph at lines 26535--26538 []\T1/ptm/m/n/10 optional [][][]\T1/zi4/m/n/10 logical[][][] []\T1/ptm/m/n/10 e ven-tu-ally to be passed to []\T1/zi4/m/n/10 print()[]\T1/ptm/m/n/10 , used by [410] [411] [412] [413] [414] [415] [416] [417] [418] [419] Underfull \hbox (badness 10000) in paragraph at lines 27163--27165 []\T1/zi4/m/n/10 isNamespaceLoaded(pkg) []\T1/ptm/m/n/10 is equiv-a-lent to but more ef-fi-cient than []\T1/zi4/m/n/10 pkg %in% [420] [421] [422] [423] [424] [425] [426] Underfull \hbox (badness 2443) in paragraph at lines 27654--27662 \T1/ptm/m/n/10 suit-able char-ac-ter vec-tors as above, or nu-meric ver-sion ob -jects. For [427] [428] [429] [430] [431] [432] [433] Underfull \hbox (badness 1881) in paragraph at lines 28084--28087 []\T1/ptm/m/n/10 integer value con-trol-ling the print-ing of lan-guage con-str ucts which are Underfull \hbox (badness 6220) in paragraph at lines 28109--28111 []\T1/ptm/m/n/10 Extra command-line ar-gu-ment(s) for non-default meth-ods: see [434] [435] Underfull \hbox (badness 2142) in paragraph at lines 28250--28254 []\T1/ptm/m/n/10 the de-fault pa-per for-mat used by [][][]\T1/zi4/m/n/10 posts cript[][][][]\T1/ptm/m/n/10 ; set by en-vi-ron-ment vari-able Underfull \hbox (badness 1968) in paragraph at lines 28307--28312 []\T1/ptm/m/n/10 the com-mand used by [][][]\T1/zi4/m/n/10 postscript[][][] []\ T1/ptm/m/n/10 for print-ing; set by en-vi-ron-ment vari-able [436] [437] [438] [439] Underfull \hbox (badness 10000) in paragraph at lines 28606--28612 []\T1/ptm/m/n/10 The URL of a Bio-con-duc-tor mir-ror for use by [][][]\T1/zi4/ m/n/10 setRepositories[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 28606--28612 \T1/ptm/m/n/10 e.g. the de-fault `[]\T1/zi4/m/n/10 "https://bioconductor.org"[] \T1/ptm/m/n/10 ' or the Eu-ro-pean mir-ror Underfull \hbox (badness 10000) in paragraph at lines 28606--28612 \T1/ptm/m/n/10 `[]\T1/zi4/m/n/10 "https://bioconductor.statistik.tu-dortmund.de "[]\T1/ptm/m/n/10 '. Can be set by Underfull \hbox (badness 5878) in paragraph at lines 28619--28622 []\T1/ptm/m/n/10 default Cc: ad-dress used by [][][]\T1/zi4/m/n/10 create.post[ ][][] []\T1/ptm/m/n/10 (and hence [][][]\T1/zi4/m/n/10 bug.report[][][] []\T1/p tm/m/n/10 and Underfull \hbox (badness 2689) in paragraph at lines 28645--28647 []\T1/ptm/m/n/10 optional in-te-ger vec-tor for set-ting ports of the in-ter-na l HTTP server, see [440] Underfull \hbox (badness 10000) in paragraph at lines 28691--28696 []\T1/ptm/m/n/10 Used by [][][]\T1/zi4/m/n/10 install.packages[][][] []\T1/ptm/ m/n/10 (and in-di-rectly Underfull \hbox (badness 2529) in paragraph at lines 28697--28708 \T1/ptm/m/n/10 in-di-rectly [][][]\T1/zi4/m/n/10 update.packages[][][][]\T1/ptm /m/n/10 ) on plat-forms which sup-port bi-nary pack-ages. Pos-si- Underfull \hbox (badness 2512) in paragraph at lines 28697--28708 \T1/ptm/m/n/10 ble val-ues are []\T1/zi4/m/n/10 "never"[]\T1/ptm/m/n/10 , []\T1 /zi4/m/n/10 "interactive" []\T1/ptm/m/n/10 (which means ask in in-ter-ac-tive u se and Underfull \hbox (badness 7203) in paragraph at lines 28709--28712 []\T1/ptm/m/n/10 default email-ing method used by [][][]\T1/zi4/m/n/10 create.p ost[][][] []\T1/ptm/m/n/10 and hence [][][]\T1/zi4/m/n/10 bug.report[][][] []\T 1/ptm/m/n/10 and [441] [442] [443] [444] [445] Underfull \vbox (badness 3803) has occurred while \output is active [446] Underfull \hbox (badness 10000) in paragraph at lines 29124--29128 \T1/ptm/m/n/10 el-e-ment []\T1/zi4/m/n/10 A[c(arrayindex.x, arrayindex.y)] = FU N(X[arrayindex.x], Y[arrayindex.y], [447] [448] Underfull \hbox (badness 10000) in paragraph at lines 29271--29274 []\T1/zi4/m/n/10 str2expression(s) []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 str2la ng(s) []\T1/ptm/m/n/10 re-turn spe-cial ver-sions of []\T1/zi4/m/n/10 parse(tex t=s, [449] Underfull \hbox (badness 7925) in paragraph at lines 29352--29356 []\T1/ptm/m/n/10 for a [][][]\T1/zi4/m/n/10 character[][][] []\T1/ptm/m/n/10 ve c-tor []\T1/zi4/m/n/10 s[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 str2expression(s) [ ]\T1/ptm/m/n/10 cor-re-sponds to Underfull \hbox (badness 1253) in paragraph at lines 29352--29356 []\T1/zi4/m/n/10 parse(text = s, keep.source=FALSE)[]\T1/ptm/m/n/10 , which is al-ways of type ([][][]\T1/zi4/m/n/10 typeof[][][][]\T1/ptm/m/n/10 ) and [][][] \T1/zi4/m/n/10 class[][][] Underfull \hbox (badness 2521) in paragraph at lines 29357--29366 []\T1/ptm/m/n/10 for a [][][]\T1/zi4/m/n/10 character[][][] []\T1/ptm/m/n/10 st ring []\T1/zi4/m/n/10 s[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 str2lang(s) []\T1/pt m/m/n/10 cor-re-sponds to []\T1/zi4/m/n/10 parse(text = s, [450] [451] [452] [453] [454] [455] [456] [457] [458] [459] [460] [461] [462] [463] [464] [465] [466] Underfull \hbox (badness 2726) in paragraph at lines 30377--30380 []\T1/ptm/m/n/10 character string (or []\T1/zi4/m/n/10 NULL[]\T1/ptm/m/n/10 ) i n-di-cat-ing [][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 val-ues in printed out-put, see [467] [468] [469] [470] [471] [472] [473] [474] [475] [476] [477] [478] [479] [480] [481] [482] [483] [484] [485] Underfull \vbox (badness 3803) has occurred while \output is active [486] [487] [488] [489] [490] [491] [492] Underfull \hbox (badness 1248) in paragraph at lines 32070--32077 \T1/ptm/m/n/10 uni-form pseudo-random num-ber gen-er-a-tor, \T1/ptm/m/it/10 ACM Trans-ac-tions on Mod-el-ing and Com-puter Underfull \hbox (badness 10000) in paragraph at lines 32070--32077 \T1/ptm/m/n/10 Now see [][]$\T1/zi4/m/n/10 https : / / www . math . sci . hiros hima-[]u . ac . jp / ~m-[]mat / MT / VERSIONS / C-[]LANG / [493] [494] Underfull \hbox (badness 1533) in paragraph at lines 32188--32191 []\T1/ptm/m/n/10 As with all com-piled code, mis-specifying these func-tions ca n crash \T1/phv/m/n/10 R\T1/ptm/m/n/10 . Do in-clude the [495] [496] [497] Underfull \hbox (badness 1163) in paragraph at lines 32359--32370 []\T1/ptm/m/n/10 If all com-po-nents are dif-fer-ent (and no []\T1/zi4/m/n/10 N A[]\T1/ptm/m/n/10 s), the ranks are well de-fined, with val-ues in [498] [499] [500] [501] [502] [503] [504] [505] [506] Underfull \hbox (badness 6300) in paragraph at lines 32907--32909 []\T1/ptm/m/n/10 The sec-tion `Pro-cess-ing doc-u-men-ta-tion files' in the `Wr it-ing R Ex-ten-sions' man-ual: [507] [508] [509] [510] [511] [512] [513] [514] [515] [516] [517] [518] [519] [520] [521] [522] [523] Underfull \hbox (badness 10000) in paragraph at lines 34036--34040 []\T1/zi4/m/n/10 regexpr []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 gregexpr []\T1/p tm/m/n/10 sup-port `named cap-ture'. If groups are named, e.g., Underfull \hbox (badness 1221) in paragraph at lines 34036--34040 []\T1/zi4/m/n/10 "(?[A-Z][a-z]+)" []\T1/ptm/m/n/10 then the po-si-tions of the matches are also re-turned by name. Underfull \hbox (badness 3557) in paragraph at lines 34057--34059 []\T1/ptm/m/n/10 The POSIX 1003.2 stan-dard at [][]$\T1/zi4/m/n/10 https : / / pubs . opengroup . org / onlinepubs / 9699919799 / Underfull \hbox (badness 1122) in paragraph at lines 34060--34064 []\T1/ptm/m/n/10 The []\T1/zi4/m/n/10 pcre2pattern []\T1/ptm/m/n/10 or []\T1/zi 4/m/n/10 pcrepattern man []\T1/ptm/m/n/10 page (found as part of [][]$\T1/zi4/m /n/10 https : / / www . pcre . org / [524] [525] Underfull \vbox (badness 10000) has occurred while \output is active [526] [527] [528] [529] [530] [531] [532] [533] Underfull \hbox (badness 1655) in paragraph at lines 34662--34664 []\T1/ptm/m/n/10 a vec-tor (atomic, not a list) for []\T1/zi4/m/n/10 rle()[]\T1 /ptm/m/n/10 ; an ob-ject of class []\T1/zi4/m/n/10 "rle" []\T1/ptm/m/n/10 for [534] [535] [536] [537] [538] [539] [540] [541] [542] [543] [544] [545] [546] [547] [548] [549] [550] [551] [552] Underfull \hbox (badness 2261) in paragraph at lines 35869--35874 []\T1/ptm/m/n/10 If []\T1/zi4/m/n/10 strip.white []\T1/ptm/m/n/10 is of length 1, it ap-plies to all fields; oth-er-wise, if [553] [554] [555] [556] [557] [558] [559] [560] [561] [562] [563] [564] [565] [566] [567] [568] [569] Underfull \hbox (badness 3668) in paragraph at lines 36945--36949 []\T1/zi4/m/n/10 getAllConnections []\T1/ptm/m/n/10 re-turns a se-quence of in- te-ger con-nec-tion de-scrip-tors for use with [570] Underfull \hbox (badness 10000) in paragraph at lines 37036--37047 \T1/zi4/m/n/10 / / learn . microsoft . com / en-[]us / cpp / c-[]language / par sing-[]c-[]command-[]line-[]arguments ? [571] [572] [573] [574] [575] [576] [577] [578] [579] [580] [581] [582] [583] [584] [585] [586] [587] [588] [589] [590] Underfull \vbox (badness 3803) has occurred while \output is active [591] [592] [593] [594] [595] [596] Underfull \hbox (badness 10000) in paragraph at lines 38675--38677 [][][]$\T1/zi4/m/n/10 https : / / pubs . opengroup . org / onlinepubs / 9699919 799 / functions / snprintf . html$[][] \T1/ptm/m/n/10 for [597] [598] [599] [600] [601] [602] Underfull \hbox (badness 2913) in paragraph at lines 39093--39097 \T1/ptm/m/n/10 ber of nested \T1/phv/m/n/10 R \T1/ptm/m/n/10 ex-pres-sions cur- rently un-der eval-u-a-tion, ex-ceeds the limit set by [603] [604] [605] [606] Underfull \hbox (badness 1072) in paragraph at lines 39339--39343 []\T1/ptm/m/n/10 On front-ends which sup-port it, the com-mands his-tory is rea d from the file spec-i-fied by Underfull \hbox (badness 10000) in paragraph at lines 39344--39348 []\T1/ptm/m/n/10 The command-line op-tion `[]\T1/zi4/m/n/10 --vanilla[]\T1/ptm/ m/n/10 ' im-plies `[]\T1/zi4/m/n/10 --no-site-file[]\T1/ptm/m/n/10 ', `[]\T1/zi 4/m/n/10 --no-init-file[]\T1/ptm/m/n/10 ', Underfull \hbox (badness 10000) in paragraph at lines 39384--39390 []\T1/ptm/m/n/10 On sys-tems with sub-architectures (mainly Win-dows), the file s `\T1/zi4/m/n/10 Renviron.site\T1/ptm/m/n/10 ' Underfull \hbox (badness 10000) in paragraph at lines 39384--39390 \T1/ptm/m/n/10 and `\T1/zi4/m/n/10 Rprofile.site\T1/ptm/m/n/10 ' are looked for first in architecture-specific di-rec-to-ries, Underfull \hbox (badness 1320) in paragraph at lines 39384--39390 \T1/ptm/m/n/10 e.g. `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/i386/R environ.site\T1/ptm/m/n/10 '. And e.g. `\T1/zi4/m/n/10 .Renviron.i386\T1/ptm/m/ n/10 ' will be used in [607] Underfull \hbox (badness 3009) in paragraph at lines 39399--39406 []\T1/ptm/m/n/10 On Unix ver-sions of \T1/phv/m/n/10 R \T1/ptm/m/n/10 there is also a file `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/Renviron\T1/pt m/m/n/10 ' which is read Underfull \hbox (badness 1038) in paragraph at lines 39399--39406 \T1/ptm/m/n/10 very early in the start-up pro-cess-ing. It con-tains en-vi-ron- ment vari-ables set by \T1/phv/m/n/10 R \T1/ptm/m/n/10 in the Underfull \hbox (badness 2573) in paragraph at lines 39399--39406 \T1/ptm/m/n/10 con-fig-ure pro-cess. Val-ues in that file can be over-rid-den i n site or user en-vi-ron-ment Underfull \hbox (badness 1917) in paragraph at lines 39399--39406 \T1/ptm/m/n/10 files: do not change `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/ n/10 /etc/Renviron\T1/ptm/m/n/10 ' it-self. Note that this is dis-tinct from [608] [609] [610] Underfull \hbox (badness 2644) in paragraph at lines 39634--39638 []\T1/ptm/m/n/10 alternative to []\T1/zi4/m/n/10 exprs []\T1/ptm/m/n/10 or []\T 1/zi4/m/n/10 ...[]\T1/ptm/m/n/10 : an `expression-like' ob-ject, typ-i-cally an [611] [612] [613] [614] [615] [616] [617] [618] [619] Underfull \vbox (badness 10000) has occurred while \output is active [620] [621] [622] [623] [624] [625] [626] [627] [628] [629] [630] [631] [632] [633] [634] [635] Underfull \hbox (badness 4144) in paragraph at lines 41182--41190 []\T1/ptm/m/n/10 (for []\T1/zi4/m/n/10 summary.default[]\T1/ptm/m/n/10 ) or [][ ][]\T1/zi4/m/n/10 format[][][]() []\T1/ptm/m/n/10 (for []\T1/zi4/m/n/10 summary .data.frame[]\T1/ptm/m/n/10 ). In Underfull \hbox (badness 1158) in paragraph at lines 41192--41194 []\T1/ptm/m/n/10 integer code used in []\T1/zi4/m/n/10 quantile(*, type=quantil e.type) []\T1/ptm/m/n/10 for the de-fault [636] [637] [638] [639] [640] [641] [642] [643] [644] [645] Underfull \hbox (badness 1137) in paragraph at lines 41802--41808 []\T1/ptm/m/n/10 This ex-pands tilde (see [][]tilde ex-pan-sion[][][]) and wild -cards in file paths. For pre-cise de-tails Underfull \hbox (badness 4967) in paragraph at lines 41820--41825 []\T1/ptm/m/n/10 If a file-name starts with []\T1/zi4/m/n/10 . []\T1/ptm/m/n/10 this may need to be matched ex-plic-itly: for ex-am-ple [646] [647] Underfull \hbox (badness 1616) in paragraph at lines 41943--41948 []\T1/zi4/m/n/10 system("id") []\T1/ptm/m/n/10 is much more portable on Unix-al ikes, pro-vided only the POSIX op-tions [648] [649] [650] [651] Underfull \vbox (badness 3803) has occurred while \output is active [652] [653] [654] [655] [656] Underfull \hbox (badness 1472) in paragraph at lines 42490--42493 []\T1/ptm/m/n/10 logical. If []\T1/zi4/m/n/10 TRUE[]\T1/ptm/m/n/10 , func-tions keep their source in-clud-ing com-ments, see [657] [658] [659] LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/n' instead on input line 42702. [660] [661] [662] [663] [664] [665] [666] [667] [668] [669] [670] [671] Underfull \hbox (badness 10000) in paragraph at lines 43441--43445 []\T1/ptm/m/n/10 On 64-bit plat-forms []\T1/zi4/m/sl/10 bin []\T1/ptm/m/n/10 ca n have $\OT1/cmr/m/n/10 2[]$ \T1/ptm/m/n/10 or more el-e-ments (i.e., []\T1/zi4 /m/sl/10 length(bin) > [672] [673] [674] [675] [676] [677] [678] [679] [680] [681] [682] [683] [684] [685] [686] [687] [688] [689] Underfull \hbox (badness 10000) in paragraph at lines 44635--44638 [][][]$\T1/zi4/m/sl/10 https : / / en . wikipedia . org / wiki / Time _ zone$[] [] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/sl/10 https : / / data . iana . org / time -[]zones / [690] [691] [692] [693] [694] [695] Underfull \vbox (badness 10000) has occurred while \output is active [696] [697] [698] [699] [700] [701] [702] [703] Underfull \hbox (badness 1990) in paragraph at lines 45551--45559 []\T1/zi4/m/sl/10 try []\T1/ptm/m/n/10 eval-u-ates an ex-pres-sion and traps an y er-rors that oc-cur dur-ing the eval-u-a-tion. If Underfull \hbox (badness 4846) in paragraph at lines 45551--45559 \T1/ptm/m/n/10 an er-ror oc-curs then the er-ror mes-sage is printed to the [][ ][]\T1/zi4/m/sl/10 stderr[][][] []\T1/ptm/m/n/10 con-nec-tion un-less [704] [705] [706] [707] [708] [709] [710] [711] [712] [713] [714] [715] [716] [717] [718] [719] [720] [721] [722] [723] [724] [725] Underfull \hbox (badness 1014) in paragraph at lines 46992--46995 []\T1/ptm/m/n/10 logical, in-di-cat-ing if the warn-ing should be out-put im-me -di-ately, even if [726] [727] Underfull \hbox (badness 2401) in paragraph at lines 47125--47129 []\T1/ptm/m/n/10 See the de-scrip-tion of [][][]\T1/zi4/m/sl/10 options[][][](" warn") []\T1/ptm/m/n/10 for the cir-cum-stances un-der which there is a [728] [729] Underfull \hbox (badness 3492) in paragraph at lines 47251--47253 []\T1/zi4/m/sl/10 weekdays []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 months []\T1/ ptm/m/n/10 re-turn a char-ac-ter vec-tor of names in the lo-cale in use, i.e., [730] [731] Underfull \hbox (badness 2111) in paragraph at lines 47337--47342 \T1/ptm/m/n/10 If [][][]\T1/zi4/m/sl/10 names[][][](.dimnames) []\T1/ptm/m/n/10 is not empty, these are used as col-umn names. [732] [733] [734] Underfull \hbox (badness 4001) in paragraph at lines 47585--47587 []\T1/ptm/m/n/10 Thomas Lum-ley (2003) \T1/ptm/m/it/10 Stan-dard non-stan-dard eval-u-a-tion rules\T1/ptm/m/n/10 . [][]$\T1/zi4/m/sl/10 https : / / developer . [735] [736] [737] [738] [739] [740] [741] Underfull \hbox (badness 5417) in paragraph at lines 47987--47991 []\T1/zi4/m/sl/10 .packages() []\T1/ptm/m/n/10 re-turns the names of the cur-re ntly at-tached pack-ages \T1/ptm/m/it/10 in-vis-i-bly \T1/ptm/m/n/10 whereas [742] Underfull \hbox (badness 10000) in paragraph at lines 48048--48052 []\T1/zi4/m/sl/10 .standard_regexps []\T1/ptm/m/n/10 re-turns a list of `stan-d ard' reg-exps, in-clud-ing el-e-ments named [743]) (./compiler-pkg.tex [744] Chapter 2. [745] [746] [747] [748]) (./datasets-pkg.tex Chapter 3. [749] [750] [751] [752] [753] [754] [755] [756] [757] [758] [759] [760] [761] [762] [763] [764] [765] Underfull \hbox (badness 1097) in paragraph at lines 1034--1038 []\T1/ptm/m/n/10 MacDonell, W.R. (1902). On crim-i-nal an-thro-pom-e-try and th e iden-ti-fi-ca-tion of crim-i-nals. [766] [767] [768] [769] [770] [771] [772] [773] [774] [775] Overfull \hbox (5.23488pt too wide) in paragraph at lines 1643--1643 []\T1/zi4/m/n/9 matlines(gait[, -1, 1], gait[, -1, 2], type = "l", lty = 1, co l = adjustcolor("thistle", 1/3))[] [776] [777] [778] [779] [780] [781] [782] [783] [784] [785] [786] [787] [788] [789] [790] [791] [792] [793] [794] [795] [796] [797] [798] [799] [800] [801] [802] [803] [804] [805] [806] [807] [808] [809] [810] [811] Overfull \hbox (2.27475pt too wide) in paragraph at lines 3775--3775 []\T1/zi4/m/n/9 ## From https://pubs.usgs.gov/gip/Elevations-Distances/elvadis t.html#Geographic%20Centers[] [812] [813] [814] [815] [816] [817] [818] [819] [820] [821] [822] [823] [824] [825] [826] [827] [828] [829] [830] [831] [832] [833] [834] [835]) (./grDevices-pkg.tex [836] Chapter 4. [837] [838] [839] [840] [841] Underfull \hbox (badness 2221) in paragraph at lines 284--288 []\T1/ptm/m/n/10 numeric vec-tor of length 3, []\T1/zi4/m/sl/10 c(mi, ma, n.)[] \T1/ptm/m/n/10 , with iden-ti-cal mean-ing to Underfull \hbox (badness 10000) in paragraph at lines 299--304 []\T1/ptm/m/n/10 Apart from that, []\T1/zi4/m/sl/10 axisTicks() []\T1/ptm/m/n/1 0 just calls the C func-tion []\T1/zi4/m/sl/10 CreateAtVector() []\T1/ptm/m/n/1 0 in [842] [843] [844] [845] [846] [847] [848] [849] [850] [851] Underfull \hbox (badness 1424) in paragraph at lines 911--913 [][][]\T1/zi4/m/sl/10 NA[][][] []\T1/ptm/m/n/10 (as in-te-ger or char-ac-ter) a nd []\T1/zi4/m/sl/10 "NA" []\T1/ptm/m/n/10 mean trans-par-ent, which can also b e spec-i-fied as [852] Underfull \vbox (badness 10000) has occurred while \output is active [853] [854] [855] [856] Underfull \hbox (badness 5175) in paragraph at lines 1239--1241 []\T1/ptm/m/n/10 There is cur-rently no doc-u-men-ta-tion about the al-go-rithm . The source code is in [857] [858] Underfull \hbox (badness 2512) in paragraph at lines 1358--1360 []\T1/ptm/m/n/10 For the white points [][]$\T1/zi4/m/sl/10 https : / / web . ar chive . org / web / 20190613001950 / http : / / efg2 . com / [859] [860] [861] [862] [863] Underfull \hbox (badness 1490) in paragraph at lines 1658--1663 \T1/ptm/m/n/10 by [][][]\T1/zi4/m/sl/10 rasterImage[][][] []\T1/ptm/m/n/10 and [][][]\T1/zi4/m/sl/10 grid.raster[][][][]\T1/ptm/m/n/10 ? Pos-si-ble val-ues [] \T1/zi4/m/sl/10 "no"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "yes" []\T1/ptm/m/n/10 and Underfull \hbox (badness 3302) in paragraph at lines 1671--1675 []\T1/ptm/m/n/10 character: Does the de-vice sup-port pat-tern fills? One or mo re of [864] [865] [866] [867] [868] [869] Underfull \hbox (badness 1325) in paragraph at lines 2086--2096 []\T1/zi4/m/sl/10 "png48"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "pngmono"[]\T1/pt m/m/n/10 , []\T1/zi4/m/sl/10 "pnggray"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "png alpha"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "bmp16"[]\T1/ptm/m/n/10 , []\T1/zi4/ m/sl/10 "bmp16m" "bmp256"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "bmp32b"[]\T1/ptm /m/n/10 , [870] [871] Underfull \hbox (badness 10000) in paragraph at lines 2198--2200 []\T1/ptm/m/n/10 The de-fault value when a de-vice is opened is taken from the set-ting of [872] [873] [874] Underfull \hbox (badness 6758) in paragraph at lines 2386--2389 []\T1/ptm/m/n/10 Some other op-tions which can be use-ful (see your Ghostscript doc-u-men-ta-tion) are [875] [876] [877] [878] [879] [880] [881] [882] [883] [884] [885] [886] Underfull \hbox (badness 10000) in paragraph at lines 3143--3144 [887] [888] [889] [890] [891] [892] [893] [894] [895] [896] [897] [898] Underfull \vbox (badness 3803) has occurred while \output is active [899] [900] [901] [902] Underfull \vbox (badness 10000) has occurred while \output is active [903] [904] [905] [906] Underfull \hbox (badness 1418) in paragraph at lines 4429--4436 \T1/ptm/m/n/10 it is one of []\T1/zi4/m/sl/10 "AvantGarde"[]\T1/ptm/m/n/10 , [] \T1/zi4/m/sl/10 "Bookman"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Courier"[]\T1/pt m/m/n/10 , []\T1/zi4/m/sl/10 "Helvetica"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "H elvetica-Narrow"[]\T1/ptm/m/n/10 , [907] [908] [909] [910] Underfull \hbox (badness 1152) in paragraph at lines 4716--4723 []\T1/zi4/m/sl/10 encoding[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 bg[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/sl/10 fg[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 pointsize[]\T1/pt m/m/n/10 , []\T1/zi4/m/sl/10 pagecentre[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 col ormodel[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 useDingbats[]\T1/ptm/m/n/10 , [911] [912] [913] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.symbol}) has been already used, duplicate ignored \relax l.4896 \aliasA{symbol}{plotmath}{symbol} [914] [915] [916] [917] Underfull \vbox (badness 3803) has occurred while \output is active [918] [919] Underfull \hbox (badness 1584) in paragraph at lines 5289--5291 []\T1/ptm/m/n/10 For type []\T1/zi4/m/sl/10 "cairo"[]\T1/ptm/m/n/10 , the []\T1 /zi4/m/sl/10 symbolfamily []\T1/ptm/m/n/10 ar-gu-ment can be sup-plied. See Underfull \hbox (badness 1067) in paragraph at lines 5293--5300 \T1/ptm/m/n/10 The lat-ter will only be avail-able if the sys-tem was com-piled with sup- [920] [921] [922] [923] Underfull \hbox (badness 1377) in paragraph at lines 5595--5600 []\T1/ptm/m/n/10 a char-ac-ter string de-scrib-ing the color model: cur-rently al-lowed val-ues [924] [925] Underfull \hbox (badness 1377) in paragraph at lines 5699--5704 []\T1/ptm/m/n/10 Color mod-els pro-vided for back-wards com-pat-i-bil-ity are [ ]\T1/zi4/m/sl/10 "rgb" []\T1/ptm/m/n/10 (which is RGB+gray) and [926] Underfull \hbox (badness 7344) in paragraph at lines 5768--5770 []\T1/ptm/m/n/10 Support for Com-puter Mod-ern fonts is based on a con-tri-bu-t ion by Brian D'Urso [927] [928] Underfull \hbox (badness 2035) in paragraph at lines 5907--5916 []\T1/ptm/m/n/10 Mappings for a num-ber of stan-dard Adobe fonts (and URW equiv -a-lents) are also pro- Underfull \hbox (badness 10000) in paragraph at lines 5907--5916 \T1/ptm/m/n/10 vided: []\T1/zi4/m/sl/10 "AvantGarde"[]\T1/ptm/m/n/10 , []\T1/zi 4/m/sl/10 "Bookman"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Courier"[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/sl/10 "Helvetica"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Helveti ca-Narrow"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 5907--5916 []\T1/zi4/m/sl/10 "NewCenturySchoolbook"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "P alatino" []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 "Times"[]\T1/ptm/m/n/10 ; []\T1 /zi4/m/sl/10 "URWGothic"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "URWBookman"[]\T1/ ptm/m/n/10 , [929] Underfull \hbox (badness 10000) in paragraph at lines 5973--5978 []\T1/zi4/m/sl/10 BousungEG-Light-GB []\T1/ptm/m/n/10 can be found at [][]$\T1/ zi4/m/sl/10 https : / / ftp . gnu . org / pub / non-[]gnu / [930] [931] [932] Underfull \hbox (badness 1546) in paragraph at lines 6114--6122 []\T1/ptm/m/n/10 arguments []\T1/zi4/m/sl/10 onefile[]\T1/ptm/m/n/10 , []\T1/zi 4/m/sl/10 family[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 title[]\T1/ptm/m/n/10 , [] \T1/zi4/m/sl/10 fonts[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 encoding[]\T1/ptm/m/n /10 , []\T1/zi4/m/sl/10 bg[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 fg[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/sl/10 width[]\T1/ptm/m/n/10 , [933] [934] [935] [936] [937] [938] Underfull \hbox (badness 6625) in paragraph at lines 6558--6561 []\T1/ptm/m/n/10 Murrell, P., Ooms, J., Al-laire, J.J. (2015), "Record-ing and Re-play-ing the Graph- [939] [940] Underfull \hbox (badness 10000) in paragraph at lines 6662--6665 []\T1/zi4/m/sl/10 rgb2hsv []\T1/ptm/m/n/10 trans-forms col-ors from RGB space ( red/green/blue) into HSV space [941] [942] [943] [944] Overfull \hbox (9.73488pt too wide) in paragraph at lines 6899--6899 []\T1/zi4/m/n/9 ## but now, x in [-0.5, 20] -- "too far" ==> "wrap around" pro blem (without \TS1/zi4/m/n/9 '\T1/zi4/m/n/9 continuous=TRUE\TS1/zi4/m/n/9 '\T1/ zi4/m/n/9 ):[] [945] [946] [947] [948] [949] [950] [951] [952] [953] [954] Underfull \hbox (badness 1189) in paragraph at lines 7528--7530 []\T1/ptm/m/n/10 for cairo types, the type of anti-aliasing (if any) to be used . One of [955] Underfull \hbox (badness 10000) in paragraph at lines 7633--7635 []\T1/zi4/m/sl/10 "-*-mincho-%s-%s-*-*-%d-*-*-*-*-*-*-*" []\T1/ptm/m/n/10 for C JK lan-guages and [956] [957] [958] [959] [960] [961] [962] [963] [964]) (./graphics-pkg.tex Chapter 5. [965] [966] [967] [968] [969] [970] [971] [972] [973] [974] [975] Underfull \vbox (badness 3803) has occurred while \output is active [976] [977] [978] [979] [980] [981] Overfull \hbox (12.71341pt too wide) in paragraph at lines 1038--1038 [] \T1/zi4/m/n/9 main = "barplot(Freq ~ Class + Survived, *)", ylab = " # {passengers}", legend.text = TRUE)[] [982] [983] [984] [985] [986] [987] Underfull \hbox (badness 4634) in paragraph at lines 1411--1414 [][][]\T1/zi4/m/sl/10 boxplot.default[][][] []\T1/ptm/m/n/10 which al-ready wor ks nowa-days with data.frames; [][][]\T1/zi4/m/sl/10 boxplot.formula[][][][]\T1 /ptm/m/n/10 , [988] [989] [990] [991] [992] [993] [994] [995] [996] [997] [998] [999] [1000] [1001] [1002] [1003] [1004] Underfull \hbox (badness 1728) in paragraph at lines 2389--2391 []\T1/ptm/m/n/10 a string in-di-cat-ing the x-axis style; use []\T1/zi4/m/sl/10 "n" []\T1/ptm/m/n/10 to sup-press and see also [1005] Underfull \hbox (badness 1009) in paragraph at lines 2482--2489 \T1/ptm/m/n/10 be in as-cend-ing or-der. (The rest of this de-scrip-tion does n ot ap-ply to [1006] [1007] [1008] [1009] [1010] [1011] [1012] [1013] [1014] [1015] [1016] [1017] [1018] [1019] [1020] [1021] [1022] [1023] [1024] [1025] [1026] [1027] [1028] [1029] Underfull \vbox (badness 10000) has occurred while \output is active [1030] Underfull \vbox (badness 10000) has occurred while \output is active [1031] [1032] [1033] [1034] [1035] [1036] [1037] [1038] [1039] [1040] [1041] [1042] Underfull \hbox (badness 3229) in paragraph at lines 4756--4761 []\T1/ptm/m/n/10 a char-ac-ter string in-di-cat-ing if log-a-rith-mic axes are to be used, see [1043] [1044] [1045] [1046] [1047] Underfull \hbox (badness 1107) in paragraph at lines 5255--5261 []\T1/ptm/m/n/10 is []\T1/zi4/m/sl/10 par("cin")/par("pin") []\T1/ptm/m/n/10 sc aled to user co-or-di-nates. Note that []\T1/zi4/m/sl/10 c([][]strwidth[][][](c h), [1048] [1049] Underfull \hbox (badness 10000) in paragraph at lines 5384--5387 [1050 ] Underfull \hbox (badness 10000) in paragraph at lines 5445--5447 Underfull \vbox (badness 10000) has occurred while \output is active [1051] [1052 ] [1053] [1054] [1055] [1056] [1057] [1058] [1059] [1060] [1061] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.plot}) ha s been already used, duplicate ignored \relax l.6120 \aliasA{plot}{plot.default}{plot} [1062] [1063] [1064] [1065] [1066] [1067] [1068] [1069] [1070] [1071] [1072] [1073] [1074] [1075] Overfull \hbox (31.57222pt too wide) in paragraph at lines 7026--7027 [][] [1076] [1077 ] [1078] [1079] [1080] [1081] [1082] [1083] [1084] [1085] [1086] [1087] [1088] [1089] [1090] [1091] [1092] [1093] [1094] [1095] [1096] [1097] [1098] [1099] [1100] [1101] [1102] [1103] [1104] [1105] [1106] [1107] [1108] [1109] [1110] [1111] Underfull \hbox (badness 4954) in paragraph at lines 9140--9142 []\T1/ptm/m/n/10 Sub-title (at bot-tom) us-ing font, size and color []\T1/zi4/m /sl/10 par(c("font.sub", Underfull \hbox (badness 1019) in paragraph at lines 9142--9144 []\T1/ptm/m/n/10 X axis la-bel us-ing font, size and color []\T1/zi4/m/sl/10 pa r(c("font.lab", "cex.lab", [1112] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.units}) h as been already used, duplicate ignored \relax l.9222 \HeaderA{units}{Graphical Units}{units} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.units.1}) has been already used, duplicate ignored \relax l.9222 \HeaderA{units}{Graphical Units}{units} [1113] [1114] [1115] [1116]) (./grid-pkg.tex Chapter 6. [1117] [1118] [1119] [1120] [1121] [1122] [1123] [1124] [1125] Underfull \hbox (badness 2680) in paragraph at lines 551--554 []\T1/ptm/m/n/10 Note that []\T1/zi4/m/sl/10 preDrawDetails []\T1/ptm/m/n/10 an d []\T1/zi4/m/sl/10 postDrawDetails []\T1/ptm/m/n/10 are also called in the cal -cu-la-tion of [1126] [1127] [1128] [1129] [1130] [1131] [1132] [1133] [1134] [1135] [1136] Underfull \hbox (badness 4279) in paragraph at lines 1188--1197 [][][]\T1/ptm/m/n/10 Grid[][][], [][][]\T1/zi4/m/sl/10 pushViewport[][][][]\T1/ ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 popViewport[][][][]\T1/ptm/m/n/10 , [][][]\T 1/zi4/m/sl/10 downViewport[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 seekVi ewport[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 upViewport[][][][]\T1/ptm/ m/n/10 , [][][]\T1/zi4/m/sl/10 unit[][][][]\T1/ptm/m/n/10 , [1137] [1138] [1139] [1140] [1141] [1142] [1143] [1144] [1145] [1146] [1147] [1148] [1149] [1150] [1151] [1152] [1153] [1154] [1155] [1156] [1157] [1158] [1159] [1160] [1161] [1162] [1163] [1164] [1165] [1166] [1167] [1168] Underfull \hbox (badness 10000) in paragraph at lines 3103--3105 []\T1/ptm/m/n/10 A func-tion that re-turns an affine trans-for-ma-tion ma-trix; see [1169] [1170] [1171] [1172] [1173] [1174] [1175] [1176] [1177] [1178] [1179] [1180] [1181] [1182] [1183] [1184] Underfull \vbox (badness 10000) has occurred while \output is active [1185] [1186] [1187] [1188] [1189] [1190] [1191] [1192] [1193] [1194] [1195] [1196] [1197] [1198] Underfull \hbox (badness 1067) in paragraph at lines 4843--4846 []\T1/ptm/m/n/10 Both func-tions cre-ate a seg-ments grob (a graph-i-cal ob-jec t de-scrib-ing seg-ments), but only [1199] [1200] [1201] [1202] [1203] [1204] Underfull \hbox (badness 7256) in paragraph at lines 5194--5196 []\T1/ptm/m/n/10 A char-ac-ter or [][]ex-pres-sion[][][] vec-tor. Other ob-ject s are co-erced by [1205] [1206] [1207] [1208] [1209] [1210] [1211] Underfull \hbox (badness 2142) in paragraph at lines 5648--5652 []\T1/ptm/m/n/10 ob-jects. For []\T1/zi4/m/sl/10 gridGTreeCoords []\T1/ptm/m/n/ 10 a list of ei-ther []\T1/zi4/m/sl/10 "GridGrobCoords" []\T1/ptm/m/n/10 or [1212] [1213] Underfull \hbox (badness 4699) in paragraph at lines 5730--5735 []\T1/ptm/m/n/10 Either a []\T1/zi4/m/sl/10 "GridGrobCoords" []\T1/ptm/m/n/10 o b-ject (a list of lists with com-po-nents []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 y[]\T1/ptm/m/n/10 ) or a [1214] [1215] [1216] [1217] [1218] [1219] [1220] [1221] [1222] [1223] [1224] [1225] [1226] [1227] [1228] [1229] [1230] [1231] [1232] [1233] [1234] [1235] [1236] [1237] [1238] [1239] [1240] [1241] [1242] [1243] [1244] [1245]) (./methods-pkg.tex [1246] Chapter 7. [1247] [1248] [1249] [1250] [1251] [1252] [1253] [1254] Underfull \vbox (badness 10000) has occurred while \output is active [1255] Underfull \vbox (badness 10000) has occurred while \output is active [1256] [1257] [1258] [1259] [1260] [1261] [1262] [1263] [1264] [1265] Underfull \hbox (badness 2237) in paragraph at lines 1383--1385 []\T1/ptm/m/n/10 The class []\T1/zi4/m/sl/10 "className" []\T1/ptm/m/n/10 ex-te nds []\T1/zi4/m/sl/10 "character" []\T1/ptm/m/n/10 and has a slot []\T1/zi4/m/s l/10 "package"[]\T1/ptm/m/n/10 , also of class [1266] [1267] [1268] [1269] [1270] [1271] [1272] [1273] [1274] Underfull \hbox (badness 10000) in paragraph at lines 1979--1984 []\T1/ptm/m/n/10 The ar-gu-ment to []\T1/zi4/m/sl/10 insertSource []\T1/ptm/m/n /10 can be an ob-ject of class Underfull \hbox (badness 1038) in paragraph at lines 1979--1984 \T1/ptm/m/n/10 file name is passed to []\T1/zi4/m/sl/10 insertSource []\T1/ptm/ m/n/10 it calls []\T1/zi4/m/sl/10 evalSource []\T1/ptm/m/n/10 to ob-tain the [1275] [1276] [1277] Underfull \hbox (badness 2213) in paragraph at lines 2211--2216 []\T1/ptm/m/n/10 To re-strict the search to classes in a par-tic-u-lar pack-age , use []\T1/zi4/m/sl/10 where = [1278] [1279] [1280] [1281] [1282] Underfull \hbox (badness 10000) in paragraph at lines 2572--2575 []\T1/ptm/m/n/10 As you might ex-pect [][][]\T1/zi4/m/sl/10 setGeneric[][][] [] \T1/ptm/m/n/10 and [][][]\T1/zi4/m/sl/10 setGroupGeneric[][][] []\T1/ptm/m/n/10 cre-ate ob-jects of class [1283] [1284] Underfull \hbox (badness 1132) in paragraph at lines 2712--2716 []\T1/ptm/m/n/10 In []\T1/zi4/m/sl/10 getGenerics[]\T1/ptm/m/n/10 , if []\T1/zi 4/m/sl/10 TRUE[]\T1/ptm/m/n/10 , the []\T1/zi4/m/sl/10 package []\T1/ptm/m/n/10 slot of the re-turned re-sult is in [1285] Underfull \hbox (badness 1033) in paragraph at lines 2748--2753 \T1/ptm/m/n/10 In ad-di-tion, []\T1/zi4/m/sl/10 removeGeneric []\T1/ptm/m/n/10 re-moves the func-tion it-self; []\T1/zi4/m/sl/10 removeMethods []\T1/ptm/m/n/1 0 re-stores the [1286] [1287] [1288] [1289] [1290] [1291] [1292] Underfull \hbox (badness 1102) in paragraph at lines 3305--3307 []\T1/zi4/m/sl/10 getPackageName []\T1/ptm/m/n/10 re-turns the character-string name of the pack-age (with-out the ex-tra-ne-ous [1293] [1294] [1295] [1296] [1297] Underfull \hbox (badness 10000) in paragraph at lines 3642--3651 []\T1/ptm/m/n/10 The [1298] [1299] Underfull \hbox (badness 10000) in paragraph at lines 3762--3763 [] \T1/zi4/m/sl/10 Pos <- setClass("Pos", slots = c(latitude = "numeric", longi tude = "numeric", [1300] Underfull \hbox (badness 10000) in paragraph at lines 3846--3847 []\T1/zi4/m/sl/10 Currency <- setClass("Currency", slots = c(unit = "character" ), contains = [1301] [1302] [1303] [1304] [1305] [1306] [1307] [1308] [1309] [1310] Underfull \hbox (badness 1769) in paragraph at lines 4477--4483 []\T1/ptm/m/n/10 class [][][]\T1/zi4/m/sl/10 MethodsList[][][] []\T1/ptm/m/n/10 for the ob-jects defin-ing sets of meth-ods as-so-ci-ated with a par-tic-u-lar Underfull \hbox (badness 1939) in paragraph at lines 4477--4483 []\T1/zi4/m/sl/10 MethodDefinition[]\T1/ptm/m/n/10 , or an ex-ten-sion. Class [ ][][]\T1/zi4/m/sl/10 MethodWithNext[][][] []\T1/ptm/m/n/10 for an ex-ten-sion u sed by [1311] [1312] [1313] [1314] [1315] [1316] [1317] [1318] [1319] Underfull \vbox (badness 10000) has occurred while \output is active [1320] [1321] [1322] Underfull \hbox (badness 4036) in paragraph at lines 5379--5382 []\T1/ptm/m/n/10 Object of class []\T1/zi4/m/sl/10 "PossibleMethod" []\T1/ptm/m /n/10 the method to use in re-sponse to a [1323] [1324] Underfull \hbox (badness 3803) in paragraph at lines 5452--5454 []\T1/ptm/m/n/10 arguments to spec-ify prop-er-ties of the new ob-ject, to be p assed to [1325] [1326] [1327] Underfull \hbox (badness 1087) in paragraph at lines 5683--5688 []\T1/ptm/m/n/10 In ad-di-tion, the cur-rently avail-able gener-ics with meth-o ds for this class are found (us-ing [1328] [1329] [1330] [1331] [1332] [1333] [1334] [1335] [1336] Underfull \hbox (badness 1675) in paragraph at lines 6390--6396 []\T1/ptm/m/n/10 can be con-verted ex-plic-itly as []\T1/zi4/m/sl/10 externalRe fMethod(f)[]\T1/ptm/m/n/10 , which re-turns an ob-ject of class [1337] [1338] [1339] [1340] Underfull \vbox (badness 10000) has occurred while \output is active [1341] [1342] [1343] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.S4}) has been already used, duplicate ignored \relax l.6911 \aliasA{S4}{S3Part}{S4} [1344] [1345] [1346] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Complex}) has been already used, duplicate ignored \relax l.7167 \aliasA{Complex}{S4groupGeneric}{Complex} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Logic}) h as been already used, duplicate ignored \relax l.7169 \aliasA{Logic}{S4groupGeneric}{Logic} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Math}) ha s been already used, duplicate ignored \relax l.7170 \aliasA{Math}{S4groupGeneric}{Math} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.matrixOps }) has been already used, duplicate ignored \relax l.7172 ...sA{matrixOps}{S4groupGeneric}{matrixOps} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Ops}) has been already used, duplicate ignored \relax l.7173 \aliasA{Ops}{S4groupGeneric}{Ops} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Summary}) has been already used, duplicate ignored \relax l.7174 \aliasA{Summary}{S4groupGeneric}{Summary} [1347] Underfull \hbox (badness 2050) in paragraph at lines 7236--7240 []\T1/ptm/m/n/10 The mem-bers of the group de-fined by a par-tic-u-lar generic can be ob-tained by call-ing [1348] [1349] [1350] Underfull \hbox (badness 1286) in paragraph at lines 7424--7426 []\T1/ptm/m/n/10 for []\T1/zi4/m/sl/10 .selectSuperClasses() []\T1/ptm/m/n/10 o nly, a [][][]\T1/zi4/m/sl/10 list[][][] []\T1/ptm/m/n/10 of class ex-ten-sions, typ-i-cally [1351] [1352] [1353] [1354] [1355] [1356] [1357] [1358] [1359] [1360] [1361] [1362] [1363] [1364] [1365] [1366] [1367] [1368] [1369] [1370] [1371] [1372] [1373] [1374] [1375] [1376] [1377] [1378] Underfull \vbox (badness 10000) has occurred while \output is active [1379] [1380] [1381] [1382] [1383] [1384] [1385] [1386] [1387] [1388] [1389] [1390] [1391] [1392] Underfull \hbox (badness 1158) in paragraph at lines 10432--10435 []\T1/ptm/m/n/10 Chambers, John M. (2009) \T1/ptm/m/it/10 Class In-her-i-tance in R [][]$\T1/zi4/m/sl/10 https : / / johnmchambers . su . domains / [1393] Underfull \hbox (badness 1852) in paragraph at lines 10510--10514 []\T1/ptm/m/n/10 Each of the classes ex-tends the cor-re-spond-ing un-traced cl ass, from the data part; e.g., [1394] [1395] [1396] [1397]) (./parallel-pkg.tex [1398] Chapter 8. Underfull \hbox (badness 5490) in paragraph at lines 14--16 []\T1/ptm/m/n/10 There is sup-port for mul-ti-ple RNG streams with the `[]\T1/z i4/m/sl/10 "L\TS1/zi4/m/n/10 '\T1/zi4/m/sl/10 Ecuyer-CMRG"[]\T1/ptm/m/n/10 ' [] []RNG[][][]: see [1399] [1400] [1401] [1402] [1403] Underfull \hbox (badness 1320) in paragraph at lines 300--303 []\T1/ptm/m/n/10 It has meth-ods to do so for Linux, ma-cOS, FreeBSD, OpenBSD, So-laris and Win-dows. [1404] [1405] [1406] [1407] [1408] [1409] [1410] [1411] [1412] [1413] [1414] [1415] [1416] [1417] [1418] [1419] [1420] Underfull \hbox (badness 3386) in paragraph at lines 1416--1419 []\T1/ptm/m/n/10 An in-te-ger vec-tor of length 7 as given by []\T1/zi4/m/sl/10 .Random.seed []\T1/ptm/m/n/10 when the [1421] [1422] [1423]) (./splines-pkg.tex [1424] Chapter 9. Underfull \hbox (badness 10000) in paragraph at lines 22--24 []\T1/ptm/m/n/10 Douglas M. Bates \T1/zi4/m/sl/10 \T1/ptm /m/n/10 and William N. Ven-ables [1425] [1426] [1427] [1428] [1429] [1430] [1431] [1432] [1433] [1434] [1435] [1436] [1437] [1438] [1439] [1440]) (./stats-pkg.tex Chapter 10. [1441] [1442] [1443] [1444] [1445] [1446] [1447] [1448] [1449] [1450] [1451] [1452] [1453] [1454] Underfull \hbox (badness 1412) in paragraph at lines 901--903 []\T1/ptm/m/n/10 A fit-ted model ob-ject, for ex-am-ple from []\T1/zi4/m/sl/10 lm []\T1/ptm/m/n/10 or []\T1/zi4/m/sl/10 aov[]\T1/ptm/m/n/10 , or a for-mula fo r [1455] [1456] [1457] [1458] [1459] [1460] [1461] [1462] Underfull \hbox (badness 2503) in paragraph at lines 1389--1392 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1463] [1464] [1465] [1466] [1467] [1468] [1469] [1470] [1471] [1472] [1473] [1474] [1475] [1476] [1477] [1478] [1479] [1480] [1481] [1482] [1483] [1484] [1485] [1486] [1487] [1488] [1489] [1490] [1491] [1492] [1493] [1494] [1495] [1496] Underfull \hbox (badness 2503) in paragraph at lines 3571--3574 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1497] [1498] Package amsmath Warning: Foreign command \atopwithdelims; (amsmath) \frac or \genfrac should be used instead (amsmath) on input line 3684. [1499] [1500] [1501] [1502] [1503] [1504] [1505] [1506] [1507] [1508] [1509] [1510] [1511] [1512] [1513] [1514] [1515] [1516] Underfull \hbox (badness 3989) in paragraph at lines 4830--4837 []\T1/ptm/m/n/10 a nu-meric vec-tor of length 2, equal to say $\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 g[]; g[]\OT1/cmr/m/n/10 )$\T1/ptm/m/n/10 , where $\OML/cmm/m/ it/10 g[] \OT1/cmr/m/n/10 = [1517] [1518] [1519] [1520] [1521] [1522] [1523] [1524] [1525] [1526] Underfull \hbox (badness 2556) in paragraph at lines 5484--5487 []\T1/ptm/m/n/10 character; par-tially matched to []\T1/zi4/m/sl/10 "circular"[ ]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "open"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "filter"[]\T1/ptm/m/n/10 . For [1527] [1528] [1529] [1530] [1531] [1532] [1533] Underfull \hbox (badness 2503) in paragraph at lines 5896--5900 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1534] [1535] [1536] [1537] [1538] [1539] [1540] [1541] [1542] [1543] [1544] [1545] [1546] Underfull \hbox (badness 7081) in paragraph at lines 6695--6698 []\T1/ptm/m/n/10 Objects of class []\T1/zi4/m/sl/10 "hclust" []\T1/ptm/m/n/10 c an be con-verted to class []\T1/zi4/m/sl/10 "dendrogram" []\T1/ptm/m/n/10 us-in g method Underfull \hbox (badness 10000) in paragraph at lines 6699--6701 []\T1/zi4/m/sl/10 rev.dendrogram []\T1/ptm/m/n/10 sim-ply re-turns the den-dro- gram []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 with re-versed nodes, see also [1547] [1548] [1549] [1550] [1551] [1552] Underfull \vbox (badness 10000) has occurred while \output is active [1553] [1554] [1555] Underfull \vbox (badness 10000) has occurred while \output is active [1556] [1557] [1558] [1559] [1560] Underfull \hbox (badness 10000) in paragraph at lines 7595--7598 []\T1/ptm/m/n/10 optionally, the dis-tance method used; re-sult-ing from []\T1/ zi4/m/sl/10 dist()[]\T1/ptm/m/n/10 , the [1561] [1562] [1563] [1564] [1565] [1566] Underfull \vbox (badness 3803) has occurred while \output is active [1567] [1568] [1569] [1570] [1571] [1572] [1573] [1574] [1575] Underfull \hbox (badness 1960) in paragraph at lines 8472--8475 []\T1/ptm/m/n/10 the [][][]\T1/zi4/m/sl/10 na.action[][][] []\T1/ptm/m/n/10 to be used if []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 is used as a for-mula, in which case [1576] [1577] [1578] [1579] [1580] [1581] [1582] Underfull \vbox (badness 3803) has occurred while \output is active [1583] [1584] [1585] [1586] [1587] [1588] Underfull \hbox (badness 2626) in paragraph at lines 9295--9298 []\T1/ptm/m/n/10 Either []\T1/zi4/m/sl/10 "convolution" []\T1/ptm/m/n/10 or []\ T1/zi4/m/sl/10 "recursive" []\T1/ptm/m/n/10 (and can be ab-bre-vi-ated). If [1589] Underfull \hbox (badness 2503) in paragraph at lines 9402--9406 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1590] [1591] [1592] [1593] [1594] [1595] [1596] [1597] [1598] [1599] [1600] [1601] [1602] [1603] [1604] [1605] [1606] [1607] [1608] [1609] [1610] Underfull \hbox (badness 4518) in paragraph at lines 10750--10755 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1611] [1612] [1613] [1614] [1615] Underfull \hbox (badness 2142) in paragraph at lines 11112--11115 []\T1/ptm/m/n/10 positive con-ver-gence tol-er-ance $\OML/cmm/m/it/10 ^^O$\T1/p tm/m/n/10 ; the it-er-a-tions con-verge when $\OMS/cmsy/m/n/10 j\OML/cmm/m/it/1 0 dev \OMS/cmsy/m/n/10 ^^@ Underfull \hbox (badness 1253) in paragraph at lines 11131--11134 []\T1/ptm/m/n/10 When []\T1/zi4/m/sl/10 trace []\T1/ptm/m/n/10 is true, calls t o [][][]\T1/zi4/m/sl/10 cat[][][] []\T1/ptm/m/n/10 pro-duce the out-put for eac h IWLS it-er-a-tion. Hence, [1616] Underfull \hbox (badness 1708) in paragraph at lines 11193--11197 []\T1/ptm/m/n/10 the type of resid-u-als which should be re-turned. The al-ter- na-tives are: [1617] [1618] [1619] [1620] [1621] [1622] Underfull \hbox (badness 1694) in paragraph at lines 11591--11594 []\T1/ptm/m/n/10 character vec-tors with row and col-umn la-bels to use; these de-fault to [1623] [1624] [1625] [1626] [1627] [1628] [1629] [1630] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.hat}) has been already used, duplicate ignored \relax l.12089 \aliasA{hat}{influence.measures}{hat} [1631] [1632] Underfull \hbox (badness 1484) in paragraph at lines 12234--12236 []\T1/ptm/m/n/10 The func-tion []\T1/zi4/m/sl/10 hat() []\T1/ptm/m/n/10 ex-ists mainly for S (ver-sion 2) com-pat-i-bil-ity; we rec-om-mend us-ing [1633] [1634] [1635] [1636] [1637] [1638] [1639] [1640] [1641] [1642] Underfull \hbox (badness 10000) in paragraph at lines 12821--12823 []\T1/ptm/m/n/10 tolerance even-tu-ally passed to [][][]\T1/zi4/m/sl/10 solve.d efault[][][] []\T1/ptm/m/n/10 when []\T1/zi4/m/sl/10 SSinit = [1643] [1644] [1645] [1646] [1647] [1648] Underfull \hbox (badness 2894) in paragraph at lines 13163--13167 []\T1/ptm/m/n/10 logical or in-te-ger num-ber, cur-rently only used in the de-f ault method [1649] [1650] [1651] [1652] [1653] [1654] Underfull \hbox (badness 1496) in paragraph at lines 13591--13597 []\T1/ptm/m/n/10 Gunar Schr�er and Di-et-rich Tren-kler (1995). Ex-act and Ran- dom-iza-tion Dis-tri-bu-tions of [1655] [1656] [1657] [1658] [1659] [1660] [1661] Underfull \hbox (badness 4518) in paragraph at lines 13994--13999 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1662] [1663] [1664] [1665] [1666] [1667] [1668] [1669] [1670] Underfull \hbox (badness 1596) in paragraph at lines 14625--14628 \T1/ptm/m/n/10 to []\T1/zi4/m/sl/10 print(, ...)[]\T1/ptm/m/n/10 , he nce, e.g., []\T1/zi4/m/sl/10 cutoff = []\T1/ptm/m/n/10 ; ig-nored for [1671] Underfull \hbox (badness 4518) in paragraph at lines 14683--14688 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1672] [1673] [1674] Underfull \hbox (badness 6412) in paragraph at lines 14823--14827 []\T1/ptm/m/n/10 Only for the (de-fault) case []\T1/zi4/m/sl/10 (surface = "int erpolate", statistics = Underfull \hbox (badness 1199) in paragraph at lines 14830--14832 []\T1/ptm/m/n/10 the num-ber of it-er-a-tions used in ro-bust fit-ting, i.e. on ly if []\T1/zi4/m/sl/10 family []\T1/ptm/m/n/10 is [1675] [1676] [1677] [1678] [1679] [1680] [1681] [1682] [1683] [1684] [1685] [1686] [1687] [1688] [1689] [1690] [1691] [1692] Underfull \hbox (badness 2503) in paragraph at lines 15907--15911 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1693] [1694] [1695] [1696] [1697] [1698] [1699] [1700] Underfull \hbox (badness 10000) in paragraph at lines 16420--16426 []\T1/zi4/m/sl/10 model.extract(m, "offset") []\T1/ptm/m/n/10 and []\T1/zi4/m/s l/10 model.extract(m, "response") []\T1/ptm/m/n/10 are equiv-a-lent to Underfull \hbox (badness 1867) in paragraph at lines 16420--16426 []\T1/zi4/m/sl/10 model.offset(m) []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 model. response(m) []\T1/ptm/m/n/10 re-spec-tively. []\T1/zi4/m/sl/10 model.offset []\ T1/ptm/m/n/10 sums any terms [1701] [1702] [1703] [1704] [1705] [1706] [1707] [1708] [1709] [1710] [1711] [1712] [1713] [1714] [1715] [1716] [1717] [1718] [1719] [1720] [1721] [1722] [1723] [1724] [1725] [1726] [1727] Underfull \hbox (badness 1158) in paragraph at lines 18078--18081 []\T1/ptm/m/n/10 the ex-pres-sion that was passed to []\T1/zi4/m/sl/10 nls []\T 1/ptm/m/n/10 as the data ar-gu-ment. The ac- [1728] [1729] Underfull \vbox (badness 10000) has occurred while \output is active [1730] Underfull \vbox (badness 10000) has occurred while \output is active [1731] [1732] [1733] [1734] [1735] [1736] [1737] [1738] [1739] [1740] [1741] [1742] [1743] [1744] Underfull \hbox (badness 1377) in paragraph at lines 19123--19128 []\T1/ptm/m/n/10 A vec-tor of scal-ing val-ues for the pa-ram-e-ters. Op-ti-miz a-tion is per-formed on Underfull \hbox (badness 1735) in paragraph at lines 19128--19131 []\T1/ptm/m/n/10 A vec-tor of step sizes for the finite-difference ap-prox-i-ma -tion to the gra-di-ent, on Underfull \hbox (badness 2343) in paragraph at lines 19141--19145 []\T1/ptm/m/n/10 Relative con-ver-gence tol-er-ance. The al-go-rithm stops if i t is un-able to re-duce Underfull \hbox (badness 3471) in paragraph at lines 19141--19145 \T1/ptm/m/n/10 the value by a fac-tor of []\T1/zi4/m/sl/10 reltol * (abs(val) + reltol) []\T1/ptm/m/n/10 at a step. De-faults to Underfull \hbox (badness 2662) in paragraph at lines 19149--19153 []\T1/ptm/m/n/10 The fre-quency of re-ports for the []\T1/zi4/m/sl/10 "BFGS"[]\ T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "L-BFGS-B" []\T1/ptm/m/n/10 and []\T1/zi4/m/s l/10 "SANN" []\T1/ptm/m/n/10 meth-ods if [1745] [1746] [1747] Underfull \vbox (badness 10000) has occurred while \output is active [1748] Overfull \hbox (15.73795pt too wide) in paragraph at lines 19374--19374 []\T1/zi4/m/n/9 ## 1-D minimization: "Brent" or optimize() being preferred.. b ut NM may be ok and "unavoidable",[] Overfull \hbox (3.75941pt too wide) in paragraph at lines 19377--19377 []\T1/zi4/m/n/9 system.time(ro <- optim(1, function(x) (x-pi)^2, control=list( warn.1d.NelderMead = FALSE)))[] [1749] [1750] [1751] [1752] [1753] [1754] [1755] Underfull \hbox (badness 1337) in paragraph at lines 19839--19842 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1756] [1757] [1758] [1759] [1760] [1761] [1762] [1763] [1764] Underfull \hbox (badness 10000) in paragraph at lines 20308--20314 \T1/zi4/m/sl/10 legend = "Cook\TS1/zi4/m/n/10 '\T1/zi4/m/sl/10 s distance", lty = cook.lty, col = cook.col, text.col [1765] [1766] [1767] [1768] [1769] [1770] [1771] Underfull \hbox (badness 1194) in paragraph at lines 20735--20738 []\T1/ptm/m/n/10 coverage prob-a-bil-ity for con-fi-dence in-ter-val. Plot-ting of the con-fi-dence [1772] [1773] [1774] [1775] [1776] [1777] Underfull \hbox (badness 2503) in paragraph at lines 21113--21116 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3919) in paragraph at lines 21140--21142 []\T1/ptm/m/n/10 the char-ac-ter string []\T1/zi4/m/sl/10 "Exact Poisson test" []\T1/ptm/m/n/10 or []\T1/zi4/m/sl/10 "Comparison of Poisson [1778] [1779] [1780] [1781] [1782] [1783] [1784] [1785] [1786] [1787] [1788] [1789] [1790] [1791] [1792] [1793] [1794] [1795] Underfull \hbox (badness 10000) in paragraph at lines 22218--22224 []\T1/ptm/m/n/10 For time-series pre-dic-tion, [][][]\T1/zi4/m/sl/10 predict.ar [][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 predict.Arima[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/sl/10 predict.arima0[][][][]\T1/ptm/m/n/10 , [1796] [1797] [1798] [1799] [1800] [1801] [1802] [1803] [1804] [1805] [1806] [1807] [1808] [1809] [1810] [1811] [1812] [1813] [1814] [1815] [1816] [1817] [1818] [1819] [1820] Underfull \hbox (badness 1337) in paragraph at lines 23694--23700 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1821] [1822] [1823] [1824] [1825] [1826] [1827] [1828] Underfull \hbox (badness 1436) in paragraph at lines 24186--24189 \T1/ptm/m/n/10 per-cent-ages. In \T1/phv/m/n/10 R \T1/ptm/m/n/10 ver-sions up t o 4.0.x, this had been set to []\T1/zi4/m/sl/10 max(2, Underfull \hbox (badness 1009) in paragraph at lines 24189--24192 []\T1/ptm/m/n/10 small non-negative num-ber to pro-tect against round-ing er-ro rs when []\T1/zi4/m/sl/10 j <- [1829] [1830] Underfull \hbox (badness 10000) in paragraph at lines 24341--24342 []\T1/ptm/m/n/10 Wikipedia: [][]$\T1/zi4/m/sl/10 https : / / en . wikipedia . o rg / wiki / Quantile # Estimating _ quantiles _ from _ a _ [1831] [1832] [1833] [1834] [1835] [1836] [1837] [1838] [1839] [1840] [1841] [1842] [1843] [1844] [1845] [1846] Underfull \hbox (badness 1824) in paragraph at lines 25313--25319 []\T1/ptm/m/n/10 Here, all the NAs in []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 are first re-placed by al-ter- Underfull \hbox (badness 1033) in paragraph at lines 25313--25319 \T1/ptm/m/n/10 nat-ing $\OMS/cmsy/m/n/10 ^^F\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 where $\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 is a ``Big'' num-ber (with $\OT1/cmr/ m/n/10 2\OML/cmm/m/it/10 B < M\OMS/cmsy/m/n/10 ^^C$\T1/ptm/m/n/10 , where Underfull \hbox (badness 10000) in paragraph at lines 25334--25337 []\T1/ptm/m/n/10 Apart from the end val-ues, the re-sult []\T1/zi4/m/sl/10 y = runmed(x, k) []\T1/ptm/m/n/10 sim-ply has []\T1/zi4/m/sl/10 y[j] = [1847] [1848] [1849] [1850] [1851] [1852] [1853] [1854] Underfull \vbox (badness 10000) has occurred while \output is active [1855] [1856] Underfull \hbox (badness 2165) in paragraph at lines 25909--25914 []\T1/ptm/m/n/10 Each of the fol-low-ing are []\T1/zi4/m/sl/10 "selfStart" []\T 1/ptm/m/n/10 mod-els (with ex-am-ples) [][][]\T1/zi4/m/sl/10 SSasymp[][][][]\T1 /ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 SSasympOff[][][][]\T1/ptm/m/n/10 , [1857] [1858] [1859] Underfull \hbox (badness 1867) in paragraph at lines 26119--26121 []\T1/ptm/m/n/10 potentially fur-ther ar-gu-ments passed to and from meth-ods. Passed to Underfull \hbox (badness 10000) in paragraph at lines 26135--26139 []\T1/ptm/m/n/10 where []\T1/zi4/m/sl/10 NN <- [][]nobs[][][](object, use.fallb ack = use.fallback) []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 PP <- [1860] [1861] [1862] [1863] [1864] [1865] [1866] [1867] [1868] [1869] [1870] [1871] [1872] [1873] [1874] [1875] [1876] [1877] [1878] [1879] [1880] [1881] [1882] [1883] [1884] [1885] Underfull \vbox (badness 10000) has occurred while \output is active [1886] Underfull \hbox (badness 3514) in paragraph at lines 27787--27792 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1887] [1888] [1889] [1890] Overfull \hbox (2.23795pt too wide) in paragraph at lines 28021--28021 [] \T1/zi4/m/n/9 quote({f(t[0.5]) == frac(phi[1],2)}~{} %=>% {}~~{t[0.5] == frac(log(2), e^{phi[2]})}),[] [1891] Underfull \hbox (badness 3514) in paragraph at lines 28057--28063 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1892] Overfull \hbox (14.22568pt too wide) in paragraph at lines 28117--28117 [] \T1/zi4/m/n/9 control = list(scaleOffset=1, printEval=TRUE, tol= 1e-11, nDcentral=TRUE), trace=TRUE)[] [1893] [1894] [1895] Underfull \hbox (badness 3514) in paragraph at lines 28290--28295 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1896] [1897] Underfull \hbox (badness 3514) in paragraph at lines 28377--28382 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1898] Underfull \hbox (badness 3514) in paragraph at lines 28442--28447 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1899] [1900] Underfull \hbox (badness 3514) in paragraph at lines 28536--28541 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1901] Underfull \hbox (badness 6691) in paragraph at lines 28628--28633 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 x[] \T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1902] [1903] [1904] [1905] [1906] [1907] [1908] [1909] Underfull \hbox (badness 4024) in paragraph at lines 29115--29118 []\T1/ptm/m/n/10 the span (in lags) of the loess win-dow for trend ex-trac-tion , which [1910] [1911] [1912] [1913] [1914] [1915] [1916] [1917] [1918] [1919] Underfull \hbox (badness 5431) in paragraph at lines 29725--29727 []\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above []\T1 /zi4/m/sl/10 cov.unscaled[]\T1/ptm/m/n/10 , if [1920] [1921] [1922] [1923] Underfull \hbox (badness 5431) in paragraph at lines 29935--29938 []\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above []\T1 /zi4/m/sl/10 cov.unscaled[]\T1/ptm/m/n/10 , if [1924] [1925] [1926] [1927] [1928] Underfull \hbox (badness 1337) in paragraph at lines 30250--30254 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1929] [1930] [1931] Underfull \hbox (badness 1127) in paragraph at lines 30387--30390 []\T1/ptm/m/n/10 non-centrality pa-ram-e-ter $\OML/cmm/m/it/10 ^^N$\T1/ptm/m/n/ 10 ; cur-rently ex-cept for []\T1/zi4/m/sl/10 rt()[]\T1/ptm/m/n/10 , ac-cu-rate only for [1932] [1933] [1934] Underfull \hbox (badness 1616) in paragraph at lines 30593--30596 []\T1/ptm/m/n/10 color, plot-ting char-ac-ter ex-pan-sion and type for par-tial resid-u-als, when [1935] [1936] [1937] [1938] [1939] [1940] [1941] [1942] [1943] [1944] [1945] [1946] [1947] [1948] [1949] [1950] [1951] [1952] [1953] [1954] Underfull \hbox (badness 3557) in paragraph at lines 31823--31827 []\T1/ptm/m/n/10 Setting []\T1/zi4/m/sl/10 extendInt []\T1/ptm/m/n/10 to a non- []\T1/zi4/m/sl/10 "no" []\T1/ptm/m/n/10 string, means search-ing for the cor-re ct []\T1/zi4/m/sl/10 interval = [1955] [1956] [1957] Underfull \vbox (badness 10000) has occurred while \output is active [1958] [1959] [1960] Underfull \hbox (badness 1337) in paragraph at lines 32190--32194 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1961] [1962] [1963] [1964] [1965] [1966] [1967] [1968] [1969] Underfull \hbox (badness 1337) in paragraph at lines 32718--32722 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1970] [1971] [1972] Overfull \hbox (0.71648pt too wide) in paragraph at lines 32926--32926 []\T1/zi4/m/n/9 wilcox.test( 4:2, 3:1, paired=TRUE) # Warning: canno t compute exact p-value with ties[] [1973] [1974] [1975] Overfull \hbox (19.71954pt too wide) in paragraph at lines 33087--33087 [] \T1/zi4/m/sl/10 frequency = NULL, deltat = NULL, extend = FALSE, ts.ep s = getOption("ts.eps"), ...)[] [1976] [1977] [1978] [1979] [1980]) (./stats4-pkg.tex Chapter 11. [1981] [1982] [1983] Underfull \vbox (badness 10000) has occurred while \output is active [1984] Underfull \vbox (badness 10000) has occurred while \output is active [1985] [1986] [1987] [1988] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.show.Rdas h.methods}) has been already used, duplicate ignored \relax l.503 ...Package \pkg{stats4}}{show.Rdash.methods} [1989] [1990] [1991]) (./tcltk-pkg.tex [1992] Chapter 12. [1993] [1994] [1995] [1996] [1997] [1998] [1999] Underfull \vbox (badness 10000) has occurred while \output is active [2000] Underfull \vbox (badness 10000) has occurred while \output is active [2001] Underfull \hbox (badness 1546) in paragraph at lines 672--679 []\T1/zi4/m/sl/10 tcl []\T1/ptm/m/n/10 pro-vides a generic in-ter-face to call- ing any Tk or Tcl com-mand by sim-ply run-ning [2002] [2003] [2004] [2005] [2006] Underfull \vbox (badness 10000) has occurred while \output is active [2007] [2008] [2009] [2010] [2011] [2012] [2013] [2014]) (./tools-pkg.tex Chapter 13. [2015] LaTeX Font Warning: Font shape `T1/zi4/m/it' undefined (Font) using `T1/zi4/m/n' instead on input line 72. [2016] Underfull \hbox (badness 3039) in paragraph at lines 167--170 []\T1/zi4/m/sl/10 assertWarning() []\T1/ptm/m/n/10 as-serts that a warn-ing wil l be sig-nalled, but \T1/ptm/m/it/10 not \T1/ptm/m/n/10 an er-ror, whereas [2017] [2018] [2019] Underfull \hbox (badness 1308) in paragraph at lines 326--339 []\T1/ptm/m/n/10 At a min-i-mum, the en-vi-ron-ment should con-tain rou-tines t o ren-der each of the 12 types Underfull \hbox (badness 4967) in paragraph at lines 326--339 \T1/ptm/m/n/10 of bib-li-o-graphic en-try sup-ported by [][][]\T1/zi4/m/sl/10 b ibentry[][][] []\T1/ptm/m/n/10 as well as sev-eral other rou-tines de- Underfull \hbox (badness 10000) in paragraph at lines 326--339 []\T1/zi4/m/sl/10 formatIncollection[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 format InProceedings[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatManual[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatMastersthesis[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 326--339 []\T1/zi4/m/sl/10 formatMisc[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatPhdthesi s[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatProceedings[]\T1/ptm/m/n/10 , []\T1 /zi4/m/sl/10 formatTechreport []\T1/ptm/m/n/10 and [2020] [2021] Underfull \hbox (badness 3039) in paragraph at lines 430--432 []\T1/zi4/m/sl/10 NULL []\T1/ptm/m/n/10 or char-ac-ter; name of vi-gnette en-gi ne to use. Over-rides any [2022] Underfull \hbox (badness 1142) in paragraph at lines 502--506 \T1/ptm/m/n/10 If given, vi-gnette source files are by de-fault looked for in s ub-di-rec-tory [2023] [2024] [2025] [2026] [2027] [2028] [2029] [2030] [2031] [2032] [2033] [2034] [2035] Underfull \hbox (badness 1014) in paragraph at lines 1258--1260 []\T1/ptm/m/n/10 a log-i-cal in-di-cat-ing whether to also sum-ma-rize the re-v erse de-pen-den-cies Underfull \hbox (badness 7238) in paragraph at lines 1264--1266 []\T1/ptm/m/n/10 a char-ac-ter string giv-ing the path to the di-rec-tory of a pre-vi-ous [2036] Underfull \hbox (badness 10000) in paragraph at lines 1301--1304 []\T1/ptm/m/n/10 Results and tim-ings can con-ve-niently be sum-ma-rized us-ing Overfull \hbox (15.52087pt too wide) in paragraph at lines 1301--1304 []\T1/zi4/m/sl/10 summarize_check_packages_in_dir_results []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 summarize_check_packages_in_dir_timings[]\T1/ptm/m/n/10 , [2037] [2038] [2039] [2040] [2041] [2042] Underfull \hbox (badness 10000) in paragraph at lines 1696--1707 []\T1/ptm/m/n/10 Functions []\T1/zi4/m/sl/10 CRAN_package_db()[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 CRAN_check_results()[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 CR AN_check_details() []\T1/ptm/m/n/10 and [2043] [2044] Underfull \hbox (badness 4096) in paragraph at lines 1847--1855 \T1/zi4/m/sl/10 "Imports", "LinkingTo", "Suggests", "Enhances")[]\T1/ptm/m/n/10 . Char-ac-ter string [2045] Underfull \hbox (badness 1082) in paragraph at lines 1857--1859 []\T1/ptm/m/n/10 a char-ac-ter vec-tor of \T1/phv/m/n/10 R \T1/ptm/m/n/10 li-br ary trees, or []\T1/zi4/m/sl/10 NULL []\T1/ptm/m/n/10 for all known trees (see [2046] [2047] [2048] [2049] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.GSC}) has been already used, duplicate ignored \relax l.2102 \aliasA{GSC}{find\_gs\_cmd}{GSC} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.R.Rul.GSC MD}) has been already used, duplicate ignored \relax l.2103 ...sA{R\_GSCMD}{find\_gs\_cmd}{R.Rul.GSCMD} [2050] [2051] [2052] [2053] [2054] [2055] [2056] [2057] Underfull \hbox (badness 3386) in paragraph at lines 2644--2647 []\T1/ptm/m/n/10 The de-fault method of []\T1/zi4/m/sl/10 as.Rconcordance []\T1 /ptm/m/n/10 searches for strings match-ing the pat-tern of [2058] [2059] [2060] Underfull \hbox (badness 4096) in paragraph at lines 2791--2799 \T1/zi4/m/sl/10 "Imports", "LinkingTo", "Suggests", "Enhances")[]\T1/ptm/m/n/10 . Char-ac-ter string [2061] [2062] [2063] [2064] [2065] [2066] [2067] [2068] [2069] [2070] [2071] [2072] [2073] [2074] [2075] [2076] Underfull \hbox (badness 1424) in paragraph at lines 3815--3817 []\T1/zi4/m/sl/10 NULL []\T1/ptm/m/n/10 or a named (by top-ics) char-ac-ter vec -tor of links, as re-turned by [2077] [2078] [2079] [2080] [2081] [2082] [2083] [2084] [2085] [2086] [2087] [2088] Underfull \hbox (badness 10000) in paragraph at lines 4591--4593 []\T1/ptm/m/n/10 additional ar-gu-ments use when prepar-ing the files to be run , [2089] [2090] [2091] [2092] [2093] [2094] Overfull \hbox (6.71034pt too wide) in paragraph at lines 4913--4913 []\T1/zi4/m/n/9 toTitleCase("a small fox is jumping") # "a Small Fox is .." (the \TS1/zi4/m/n/9 '\T1/zi4/m/n/9 a\TS1/zi4/m/n/9 ' \T1/zi4/m/n/9 may cha nge)% i.e. BUG[] [2095] [2096] [2097] Underfull \hbox (badness 1796) in paragraph at lines 5122--5127 []\T1/ptm/m/n/10 Users should ex-pect sig-nif-i-cantly smaller speedups over [] \T1/zi4/m/sl/10 write_PACKAGES []\T1/ptm/m/n/10 in the []\T1/zi4/m/sl/10 type = = [2098] Underfull \hbox (badness 1838) in paragraph at lines 5208--5214 []\T1/ptm/m/n/10 The re-main-ing steps are done only if file `\T1/zi4/m/sl/10 p o/\T1/ptm/m/sl/10 pkgname\T1/zi4/m/sl/10 .pot\T1/ptm/m/n/10 ' al-ready ex-ists. The Underfull \hbox (badness 10000) in paragraph at lines 5208--5214 \T1/ptm/m/n/10 `\T1/zi4/m/sl/10 src/*.{c,cc,cpp,m,mm}\T1/ptm/m/n/10 ' files in the pack-age are ex-am-ined to cre-ate a file [2099] [2100] [2101] [2102] [2103] [2104] Underfull \hbox (badness 2197) in paragraph at lines 5560--5570 []\T1/ptm/m/n/10 The de-fault cor-re-sponds to the fields needed by [][][]\T1/z i4/m/sl/10 available.packages[][][][]\T1/ptm/m/n/10 : [2105] Underfull \hbox (badness 1571) in paragraph at lines 5626--5630 []\T1/ptm/m/n/10 For a re-mote repos-i-tory there is a trade-off be-tween down- load speed and time spent by [2106] [2107] [2108] [2109]) (./utils-pkg.tex [2110] Chapter 14. [2111] Underfull \hbox (badness 2556) in paragraph at lines 47--52 []\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `[] \T1/zi4/m/sl/10 insertions[]\T1/ptm/m/n/10 ', [2112] [2113] [2114] [2115] [2116] [2117] [2118] [2119] [2120] [2121] Underfull \hbox (badness 10000) in paragraph at lines 728--734 []\T1/ptm/m/n/10 Functions []\T1/zi4/m/sl/10 aspell_package_Rd_files[]\T1/ptm/m /n/10 , []\T1/zi4/m/sl/10 aspell_package_vignettes[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3343) in paragraph at lines 728--734 []\T1/zi4/m/sl/10 aspell_package_R_files []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 aspell_package_C_files []\T1/ptm/m/n/10 per-form spell check-ing on the [2122] [2123] [2124] Underfull \hbox (badness 3861) in paragraph at lines 943--948 []\T1/ptm/m/n/10 Where pro-vided by the repos-i-tory, fields []\T1/zi4/m/sl/10 "OS_type"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "License"[]\T1/ptm/m/n/10 , []\T1 /zi4/m/sl/10 "License_is_FOSS"[]\T1/ptm/m/n/10 , [2125] [2126] [2127] Underfull \hbox (badness 10000) in paragraph at lines 1148--1150 []\T1/ptm/m/n/10 logical in-di-cat-ing if biben-tries should be sorted, us-ing [2128] [2129] [2130] Underfull \vbox (badness 3803) has occurred while \output is active [2131] [2132] [2133] [2134] [2135] [2136] Underfull \hbox (badness 1371) in paragraph at lines 1675--1677 []\T1/ptm/m/n/10 additional named ar-gu-ments such as []\T1/zi4/m/sl/10 method []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 ccaddress []\T1/ptm/m/n/10 to pass to [2137] [2138] [2139] [2140] [2141] [2142] [2143] [2144] [2145] [2146] [2147] Underfull \hbox (badness 2057) in paragraph at lines 2395--2397 []\T1/ptm/m/n/10 None for []\T1/zi4/m/sl/10 chooseCRANmirror()[]\T1/ptm/m/n/10 , this func-tion is in-voked for its side ef-fect of up-dat-ing [2148] [2149] Underfull \hbox (badness 2150) in paragraph at lines 2481--2488 []\T1/ptm/m/n/10 If the ob-ject re-turned by []\T1/zi4/m/sl/10 citation() []\T1 /ptm/m/n/10 con-tains only one ref-er-ence, the as-so-ci-ated print Underfull \hbox (badness 1400) in paragraph at lines 2481--2488 \T1/ptm/m/n/10 method shows both a text ver-sion and a Bib-TeX en-try for it. I f a pack-age has more [2150] [2151] [2152] [2153] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.clipboard }) has been already used, duplicate ignored \relax l.2758 ... the Clipboard in MS Windows}{clipboard} [2154] [2155] [2156] [2157] [2158] [2159] [2160] [2161] [2162] [2163] [2164] [2165] [2166] [2167] [2168] [2169] [2170] [2171] [2172] [2173] [2174] Underfull \hbox (badness 6842) in paragraph at lines 4068--4073 []\T1/ptm/m/n/10 Support for method []\T1/zi4/m/sl/10 "libcurl" []\T1/ptm/m/n/1 0 was op-tional on Win-dows prior to \T1/phv/m/n/10 R \T1/ptm/m/n/10 4.2.0: use [2175] Underfull \hbox (badness 1430) in paragraph at lines 4131--4135 []\T1/ptm/m/n/10 The level of de-tail pro-vided dur-ing trans-fer can be set by the []\T1/zi4/m/sl/10 quiet []\T1/ptm/m/n/10 ar-gu-ment and the [2176] Underfull \hbox (badness 1184) in paragraph at lines 4207--4223 []\T1/ptm/m/n/10 On Win-dows with []\T1/zi4/m/sl/10 method = "libcurl"[]\T1/ptm /m/n/10 , the CA root cer-tifi-cates are pro-vided by the OS Underfull \hbox (badness 1019) in paragraph at lines 4207--4223 \T1/ptm/m/n/10 con-tain-ing `[]\T1/zi4/m/sl/10 "Schannel"[]\T1/ptm/m/n/10 '. If it does not, for ver-i-fi-ca-tion to be on the en-vi-ron-ment vari- Underfull \hbox (badness 1668) in paragraph at lines 4207--4223 \T1/ptm/m/n/10 able []\T1/zi4/m/sl/10 CURL_CA_BUNDLE []\T1/ptm/m/n/10 must be s et to a path to a cer-tifi-cate bun-dle file, usu-ally named [2177] [2178] Underfull \hbox (badness 10000) in paragraph at lines 4357--4359 []\T1/ptm/m/n/10 additional ar-gu-ments to be passed to [][][]\T1/zi4/m/sl/10 d ownload.file[][][] []\T1/ptm/m/n/10 and [2179] [2180] [2181] [2182] [2183] [2184] [2185] [2186] [2187] [2188] [2189] [2190] [2191] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.format}) has been already used, duplicate ignored \relax l.5136 ...mat Unordered and Ordered Lists}{format} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.format.1} ) has been already used, duplicate ignored \relax l.5136 ...mat Unordered and Ordered Lists}{format} [2192] [2193] [2194] [2195] [2196] [2197] [2198] [2199] Underfull \hbox (badness 1622) in paragraph at lines 5659--5663 []\T1/ptm/m/n/10 This func-tion will search for Win-dows han-dles, for pass-ing to ex-ter-nal GUIs or to the [2200] [2201] [2202] [2203] [2204] [2205] Underfull \hbox (badness 1448) in paragraph at lines 6044--6049 []\T1/ptm/m/n/10 External pointer ob-jects are com-pared as ref-er-ence ob-ject s, cor-re-spond-ing to call-ing [2206] [2207] [2208] [2209] [2210] [2211] [2212] [2213] Underfull \hbox (badness 1371) in paragraph at lines 6602--6604 []\T1/ptm/m/n/10 additional named ar-gu-ments such as []\T1/zi4/m/sl/10 method []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 ccaddress []\T1/ptm/m/n/10 to pass to [2214] [2215] Underfull \hbox (badness 1502) in paragraph at lines 6691--6697 []\T1/ptm/m/n/10 a char-ac-ter string to be matched in the help page `key-words '. `Key- Underfull \hbox (badness 2103) in paragraph at lines 6691--6697 \T1/ptm/m/n/10 words' are re-ally cat-e-gories: the stan-dard cat-e-gories are listed in file [2216] [2217] [2218] Underfull \hbox (badness 10000) in paragraph at lines 6871--6880 []\T1/ptm/m/n/10 One of the links on the in-dex page is the HTML pack-age in-de x, Underfull \hbox (badness 3354) in paragraph at lines 6871--6880 \T1/ptm/m/n/10 `\T1/ptm/m/sl/10 R_DOC_DIR\T1/zi4/m/sl/10 /html/packages.html\T1 /ptm/m/n/10 ', which can be re-made by [][][]\T1/zi4/m/sl/10 make.packages.html [][][]()[]\T1/ptm/m/n/10 . [2219] Underfull \hbox (badness 2150) in paragraph at lines 6933--6936 []\T1/ptm/m/n/10 a char-ac-ter vec-tor list-ing the types of doc-u-men-ta-tion to search. See [2220] [2221] Underfull \hbox (badness 3118) in paragraph at lines 7072--7074 []\T1/ptm/m/n/10 For de-tails of the lock-ing which is done, see the sec-tion ` Lock-ing' in the help for [2222] [2223] Underfull \hbox (badness 1325) in paragraph at lines 7250--7254 []\T1/ptm/m/n/10 a ma-trix as re-turned by [][][]\T1/zi4/m/sl/10 available.pack ages[][][] []\T1/ptm/m/n/10 list-ing pack-ages avail-able [2224] Underfull \hbox (badness 1424) in paragraph at lines 7343--7346 []\T1/ptm/m/n/10 logical: if true, re-duce the amount of out-put. This is \T1/p tm/m/it/10 not \T1/ptm/m/n/10 passed to [2225] Underfull \hbox (badness 3219) in paragraph at lines 7424--7431 []\T1/ptm/m/n/10 An al-ter-na-tive (and the cur-rent de-fault) is []\T1/zi4/m/s l/10 "both" []\T1/ptm/m/n/10 which means `use bi-nary if avail- Underfull \hbox (badness 5175) in paragraph at lines 7424--7431 \T1/ptm/m/n/10 able and cur-rent, oth-er-wise try source'. The ac-tion if there are source pack-ages Underfull \hbox (badness 1342) in paragraph at lines 7424--7431 \T1/ptm/m/n/10 which are pre-ferred but may con-tain code which needs to be com -piled is con-trolled by Underfull \hbox (badness 1596) in paragraph at lines 7424--7431 [][][]\T1/zi4/m/sl/10 getOption[][][]("install.packages.compile.from.source")[] \T1/ptm/m/n/10 . []\T1/zi4/m/sl/10 type = "both" []\T1/ptm/m/n/10 will be silen tly [2226] Underfull \hbox (badness 2932) in paragraph at lines 7432--7435 []\T1/ptm/m/n/10 Using pack-ages with []\T1/zi4/m/sl/10 type = "source" []\T1/p tm/m/n/10 al-ways works pro-vided the pack-age con-tains no [2227] Underfull \hbox (badness 1024) in paragraph at lines 7561--7564 []\T1/ptm/m/n/10 For other repos-i-to-ries, us-ing []\T1/zi4/m/sl/10 available. packages(filters = "OS_type")[\T1/ptm/m/sl/10 pkgname\T1/zi4/m/sl/10 , ] []\T1/ ptm/m/n/10 will [2228] Underfull \hbox (badness 10000) in paragraph at lines 7594--7599 [][][]\T1/zi4/m/sl/10 update.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/s l/10 available.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 download. packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 installed.packages[][][] []\T1/ptm/m/n/10 , Underfull \hbox (badness 5133) in paragraph at lines 7660--7664 []\T1/ptm/m/n/10 a char-ac-ter vec-tor giv-ing the fields to ex-tract from each pack-age's [2229] [2230] [2231] [2232] [2233] [2234] [2235] [2236] [2237] [2238] [2239] [2240] Underfull \hbox (badness 10000) in paragraph at lines 8327--8329 []\T1/ptm/m/n/10 typically the re-sult of []\T1/zi4/m/sl/10 methods(..)[]\T1/pt m/m/n/10 , an \T1/phv/m/n/10 R \T1/ptm/m/n/10 ob-ject of S3 class [2241] [2242] [2243] [2244] [2245] [2246] [2247] [2248] [2249] [2250] [2251] [2252] Underfull \hbox (badness 2310) in paragraph at lines 9114--9119 []\T1/ptm/m/n/10 If a `\T1/zi4/m/sl/10 DESCRIPTION\T1/ptm/m/n/10 ' file for the given pack-age is found and can suc-cess-fully be read, [2253] [2254] [2255] [2256] [2257] [2258] [2259] [2260] [2261] Underfull \hbox (badness 1248) in paragraph at lines 9691--9695 []\T1/zi4/m/sl/10 R CMD build []\T1/ptm/m/n/10 builds \T1/phv/m/n/10 R \T1/ptm/ m/n/10 source tar-balls. The name(s) of the pack-ages are taken from the [2262] [2263] Underfull \hbox (badness 1789) in paragraph at lines 9769--9771 []\T1/ptm/m/n/10 See `Writ-ing R Ex-ten-sions' and the `R for Win-dows FAQ' for more dis-cus-sion of the [2264] [2265] [2266] [2267] Underfull \hbox (badness 2600) in paragraph at lines 9993--9996 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the name of the help topic; de-faults to [2268] [2269] [2270] [2271] [2272] [2273] [2274] [2275] [2276] Underfull \hbox (badness 1097) in paragraph at lines 10630--10633 []\T1/ptm/m/n/10 The name []\T1/zi4/m/sl/10 "clipboard" []\T1/ptm/m/n/10 may al so be used on Win-dows, in which case [2277] [2278] Underfull \hbox (badness 3000) in paragraph at lines 10766--10771 [][][]\T1/zi4/m/sl/10 scan[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 type.c onvert[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 read.fwf[][][] []\T1/ptm/m /n/10 for read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/pt m/m/n/10 idth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][][]\T1/zi4/m/ sl/10 read.table[][][][]\T1/ptm/m/n/10 ; [2279] [2280] [2281] [2282] [2283] [2284] [2285] [2286] [2287] Underfull \hbox (badness 2134) in paragraph at lines 11361--11366 [][][]\T1/zi4/m/sl/10 scan[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 type.c onvert[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 read.fwf[][][] []\T1/ptm/m /n/10 for read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/pt m/m/n/10 idth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][][]\T1/zi4/m/ sl/10 write.table[][][][]\T1/ptm/m/n/10 ; [2288] Underfull \hbox (badness 10000) in paragraph at lines 11417--11422 []\T1/ptm/m/n/10 The `hive' con-tain-ing the key. The ab-bre-vi-a-tions are for Underfull \hbox (badness 10000) in paragraph at lines 11417--11422 []\T1/zi4/m/sl/10 HKEY_LOCAL_MACHINE[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 HKEY_C LASSES_ROOT[]\T1/ptm/m/n/10 . []\T1/zi4/m/sl/10 HKEY_CURRENT_USER[]\T1/ptm/m/n/ 10 , [2289] [2290] [2291] [2292] [2293] [2294] [2295] [2296] Underfull \hbox (badness 1824) in paragraph at lines 11915--11919 \T1/zi4/m/sl/10 / / en . wikipedia . org / w / index . php ? title = Roman _ nu merals & oldid = 1188781837$[][]\T1/ptm/m/n/10 . Ac-cessed [2297] [2298] [2299] [2300] [2301] [2302] [2303] Underfull \hbox (badness 4060) in paragraph at lines 12361--12364 []\T1/ptm/m/n/10 If `[]\T1/zi4/m/sl/10 --default-packages[]\T1/ptm/m/n/10 ' is not used, then []\T1/zi4/m/sl/10 Rscript []\T1/ptm/m/n/10 checks the en-vi-ron- ment vari-able Overfull \hbox (18.77168pt too wide) in paragraph at lines 12384--12384 []\T1/zi4/m/n/9 Rscript --default-packages=methods,datasets,utils,grDevices,gr aphics,stats -e \TS1/zi4/m/n/9 '\T1/zi4/m/n/9 sessionInfo()\TS1/zi4/m/n/9 '[] [2304] [2305] [2306] [2307] Underfull \hbox (badness 2150) in paragraph at lines 12639--12641 [][][]$\T1/zi4/m/sl/10 https : / / en . wikipedia . org / wiki / Ctags$[][]\T1/ ptm/m/n/10 , [][]$\T1/zi4/m/sl/10 https : / / www . gnu . org / software / emac s / manual / [2308] [2309] [2310] [2311] Underfull \hbox (badness 10000) in paragraph at lines 12859--12863 []\T1/ptm/m/n/10 The de-fault for []\T1/zi4/m/sl/10 stylepath []\T1/ptm/m/n/10 is now taken from the en-vi-ron-ment vari-able Underfull \hbox (badness 10000) in paragraph at lines 12892--12898 []\T1/ptm/m/n/10 If you wish to over-ride this de-fault be-hav-ior en-tirely, y ou can add a [2312] Underfull \hbox (badness 2762) in paragraph at lines 12907--12913 \T1/ptm/m/n/10 UTF-8 lo-cales (note that pdf-TeX as-sumes UTF-8 by de-fault sin ce 2018). Ei-ther set [2313] [2314] Underfull \hbox (badness 1009) in paragraph at lines 13082--13094 []\T1/ptm/m/n/10 Before each code chunk is eval-u-ated, zero or more hook func- tions can be ex-e-cuted. If Underfull \hbox (badness 4779) in paragraph at lines 13122--13124 []\T1/ptm/m/n/10 The file `\T1/zi4/m/sl/10 Rconsole\T1/ptm/m/n/10 ' con-fig-ure s the R GUI ([]\T1/zi4/m/sl/10 Rgui[]\T1/ptm/m/n/10 ) con-sole un-der MS Win-do ws and [2315] Underfull \hbox (badness 1077) in paragraph at lines 13152--13159 \T1/ptm/m/n/10 (strip-ping any trail-ing slash), oth-er-wise to the Win-dows `p er-sonal' di-rec-tory, oth-er-wise to [2316] [2317] [2318] [2319] [2320] [2321] Underfull \hbox (badness 3780) in paragraph at lines 13577--13583 []\T1/ptm/m/n/10 A Bio-con-duc-tor mir-ror can be se-lected by set-ting [][][]\ T1/zi4/m/sl/10 options[][][]("BioC_mirror")[]\T1/ptm/m/n/10 , e.g. via [2322] Underfull \hbox (badness 2635) in paragraph at lines 13595--13598 []\T1/ptm/m/n/10 Repository `[]\T1/zi4/m/sl/10 CRAN[]\T1/ptm/m/n/10 ' is treate d spe-cially: the value is taken from the cur-rent set-ting of [2323] [2324] [2325] Underfull \hbox (badness 2302) in paragraph at lines 13805--13807 []\T1/ptm/m/n/10 Convert file paths to the short form. This is an in-ter-face t o the Win-dows API call [2326] [2327] [2328] [2329] [2330] Underfull \hbox (badness 4441) in paragraph at lines 14104--14109 []\T1/ptm/m/n/10 logical; if []\T1/zi4/m/sl/10 TRUE []\T1/ptm/m/n/10 (de-fault) , [][][]\T1/zi4/m/sl/10 deparse[][][](control = \T1/ptm/m/sl/10 control\T1/zi4/ m/sl/10 ) []\T1/ptm/m/n/10 will not have Underfull \hbox (badness 5970) in paragraph at lines 14113--14116 []\T1/ptm/m/n/10 the page width to be used. The de-fault is the cur-rently ac-t ive [2331] [2332] [2333] [2334] [2335] [2336] [2337] Underfull \hbox (badness 2932) in paragraph at lines 14544--14551 []\T1/ptm/m/n/10 If []\T1/zi4/m/sl/10 syntax = NULL []\T1/ptm/m/n/10 (the de-fa ult) then the avail-able syn-tax ob-jects are con-sulted in turn, Underfull \hbox (badness 1688) in paragraph at lines 14544--14551 \T1/ptm/m/n/10 and se-lected if their []\T1/zi4/m/sl/10 extension []\T1/ptm/m/n /10 com-po-nent matches (as a reg-exp) the file name. 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[1] [2] Underfull \hbox (badness 6252) in paragraph at lines 149--157 []\T1/ptm/m/n/10 a small pos-i-tive floating-point num-ber []\T1/zi4/m/n/10 x [ ]\T1/ptm/m/n/10 such that []\T1/zi4/m/n/10 1 - x != 1[]\T1/ptm/m/n/10 . It Underfull \hbox (badness 10000) in paragraph at lines 149--157 \T1/ptm/m/n/10 equals []\T1/zi4/m/n/10 double.base ^ double.neg.ulp.digits []\T 1/ptm/m/n/10 if []\T1/zi4/m/n/10 double.base Underfull \hbox (badness 10000) in paragraph at lines 149--157 []\T1/ptm/m/n/10 is 2 or []\T1/zi4/m/n/10 double.rounding []\T1/ptm/m/n/10 is 0 ; oth-er-wise, it is []\T1/zi4/m/n/10 (double.base Underfull \hbox (badness 10000) in paragraph at lines 149--157 \T1/zi4/m/n/10 ^ double.neg.ulp.digits) / 2[]\T1/ptm/m/n/10 . Nor-mally []\T1/z i4/m/n/10 1.110223e-16[]\T1/ptm/m/n/10 . As Underfull \hbox (badness 4995) in paragraph at lines 149--157 []\T1/zi4/m/n/10 double.neg.ulp.digits []\T1/ptm/m/n/10 is bounded be-low by [] \T1/zi4/m/n/10 -(double.digits + 3)[]\T1/ptm/m/n/10 , [3] [4] [5] Underfull \hbox (badness 1178) in paragraph at lines 337--340 []\T1/ptm/m/n/10 character string, the pre-ferred set-ting for [][][]\T1/zi4/m/ n/10 options[][][]("pkgType")[]\T1/ptm/m/n/10 . Val-ues [6] [7] [8] [9] Underfull \hbox (badness 2556) in paragraph at lines 572--578 []\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `[] \T1/zi4/m/n/10 insertions[]\T1/ptm/m/n/10 ', [10] [11] [12] (/usr/share/texlive/texmf-dist/tex/latex/inconsolata/ts1zi4.fd) [13{/usr/share/texlive/texmf-dist/fonts/enc/dvips/inconsolata/i4-ts1.enc}] [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] [24] [25] [26] [27] [28] [29] [30] Underfull \vbox (badness 3803) has occurred while \output is active [31] [32] [33] [34] [35] [36] Overfull \hbox (26.27782pt too wide) in paragraph at lines 2285--2285 []\T1/zi4/m/n/9 ## http://www.mathworks.de/de/help/matlab/matlab_prog/represen t-date-and-times-in-MATLAB.html)[] [37] [38] [39] [40] [41] [42] Overfull \hbox (20.69484pt too wide) in paragraph at lines 2639--2639 []\T1/zi4/m/n/9 if(file.exists(tab)) { # typically on Windows; on Linux when \TS1/cmtt/m/n/9 `\T1/zi4/m/n/9 configure --with-internal-tzcode\TS1/cmtt/m/n/9 `[] [43] [44] [45] [46] [47] Underfull \hbox (badness 1721) in paragraph at lines 2957--2961 [][][]\T1/zi4/m/n/10 assign[][][] []\T1/ptm/m/n/10 (and its in-verse [][][]\T1/ zi4/m/n/10 get[][][][]\T1/ptm/m/n/10 ), for ``sub-assign-ment'' such as []\T1/z i4/m/n/10 x[i] <- v[]\T1/ptm/m/n/10 , see [][][]\T1/zi4/m/n/10 [<-[][][][]\T1/p tm/m/n/10 ; fur-ther, [48] [49] [50] [51] [52] [53] [54] Underfull \hbox (badness 2538) in paragraph at lines 3443--3446 []\T1/zi4/m/n/10 unCfillPOSIXlt(x) []\T1/ptm/m/n/10 is a fast [][]prim-i-tive[] [][] ver-sion of []\T1/zi4/m/n/10 balancePOSIXlt(x, fill.only=TRUE, [55] [56] [57] [58] [59] Underfull \vbox (badness 3803) has occurred while \output is active [60] [61] [62] [63] [64] [65] [66] [67] Underfull \hbox (badness 10000) in paragraph at lines 4239--4241 []\T1/ptm/m/n/10 The num-ber of lines printed for the de-parsed call can be lim -ited by set-ting [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] Underfull \hbox (badness 2521) in paragraph at lines 5588--5590 []\T1/ptm/m/n/10 a char-ac-ter vec-tor, or an ob-ject that can be co-erced to c har-ac-ter by [89] [90] [91] [92] [93] [94] [95] [96] [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] [108] Overfull \hbox (5.27168pt too wide) in paragraph at lines 6871--6871 []\T1/zi4/m/n/9 stopifnot(is.na(NpNA), is.na(NA_complex_), is.na(Re(NA_complex _)), is.na(Im(NA_complex_)))[] [109] [110] [111] [112] [113] [114] [115] [116] Underfull \hbox (badness 2253) in paragraph at lines 7482--7487 []\T1/zi4/m/n/10 file[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 pipe[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 fifo[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 url[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 gzfile[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 bzfile[]\T1/ptm/m/n /10 , []\T1/zi4/m/n/10 xzfile[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 zstdfile[]\T1/ ptm/m/n/10 , []\T1/zi4/m/n/10 unz[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 socketConn ection[]\T1/ptm/m/n/10 , Underfull \hbox (badness 2846) in paragraph at lines 7482--7487 []\T1/zi4/m/n/10 socketAccept []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 serverSocke t []\T1/ptm/m/n/10 re-turn a con-nec-tion ob-ject which in-her-its from class [117] [118] [119] [120] [121] Underfull \hbox (badness 2261) in paragraph at lines 7798--7803 \T1/zi4/m/n/10 / / github . com / astrand / xclip$[][]\T1/ptm/m/n/10 ) or []\T1 /zi4/m/n/10 xsel []\T1/ptm/m/n/10 ([][]$\T1/zi4/m/n/10 https : / / www . vergen et . net / ~conrad / software / [122] [123] Underfull \vbox (badness 10000) has occurred while \output is active [124] [125] [126] [127] [128] [129] [130] [131] [132] Underfull \hbox (badness 2096) in paragraph at lines 8531--8535 \T1/zi4/m/n/10 status _ codes$[][] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / List _ of _ FTP _ server _ return _ codes$ [][]\T1/ptm/m/n/10 . [133] [134] Underfull \hbox (badness 2351) in paragraph at lines 8646--8649 [][][]\T1/zi4/m/n/10 split[][][] []\T1/ptm/m/n/10 for split-ting a vari-able ac -cord-ing to a group fac-tor; [][][]\T1/zi4/m/n/10 factor[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 tabulate[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 t able[][][][]\T1/ptm/m/n/10 , [135] [136] [137] [138] [139] Underfull \hbox (badness 4479) in paragraph at lines 8963--8974 [][][]\T1/zi4/m/n/10 I[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 plot.data.f rame[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 print.data.frame[][][][]\T1/p tm/m/n/10 , [][][]\T1/zi4/m/n/10 row.names[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/n/10 names[][][] []\T1/ptm/m/n/10 (for the col-umn names), [140] [141] [142] [143] [144] [145] Underfull \hbox (badness 1629) in paragraph at lines 9394--9406 []\T1/ptm/m/n/10 A few times have spe-cific is-sues. First, the leap sec-onds a re ig-nored, and real times Underfull \hbox (badness 2875) in paragraph at lines 9394--9406 []\T1/zi4/m/n/10 NA[]\T1/ptm/m/n/10 , and hence []\T1/zi4/m/n/10 as.POSIXct("19 69-12-31 23:59:59", tz = "UTC") []\T1/ptm/m/n/10 will give []\T1/zi4/m/n/10 "19 69-12-31 [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157] [158] Underfull \hbox (badness 1178) in paragraph at lines 10265--10269 []\T1/ptm/m/n/10 If true, [][][]\T1/zi4/m/n/10 list[][][][]\T1/ptm/m/n/10 s and atomic vec-tors with non-[][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 names (see [][][]\T1/zi4/m/n/10 names[][][][]\T1/ptm/m/n/10 ) are de- [159] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188] [189] [190] [191] [192] [193] [194] [195] Underfull \hbox (badness 2744) in paragraph at lines 12613--12615 []\T1/ptm/m/n/10 Changing the cur-rent en-cod-ing from a run-ning R ses-sion ma y lead to con-fu-sion (see [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] [223] [224] [225] [226] [227] Underfull \hbox (badness 2253) in paragraph at lines 14821--14823 []\T1/ptm/m/n/10 character vec-tors con-tain-ing file paths. Tilde-expansion is done: see [228] Underfull \hbox (badness 1490) in paragraph at lines 14856--14859 []\T1/ptm/m/n/10 Junction points and sym-bolic links are fol-lowed, so in-for-m a-tion is given about the [229] Underfull \hbox (badness 1565) in paragraph at lines 14942--14946 [][][]\T1/zi4/m/n/10 Sys.readlink[][][] []\T1/ptm/m/n/10 to find out about sym- bolic links, [][][]\T1/zi4/m/n/10 files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m /n/10 file.access[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 list.files[][][] []\T1/ptm/m/n/10 , and [230] Underfull \hbox (badness 4927) in paragraph at lines 14993--14995 []\T1/ptm/m/n/10 It can also be used for en-vi-ron-ment paths such as []\T1/zi4 /m/n/10 PATH []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 R_LIBS []\T1/ptm/m/n/10 with []\T1/zi4/m/n/10 fsep = [231] [232] Underfull \hbox (badness 1466) in paragraph at lines 15144--15147 []\T1/ptm/m/n/10 character vec-tors, con-tain-ing file names or paths. For []\T 1/zi4/m/n/10 file.copy []\T1/ptm/m/n/10 and [233] [234] Underfull \hbox (badness 10000) in paragraph at lines 15275--15279 [][][]\T1/zi4/m/n/10 file.info[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 fil e.access[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.path[][][][]\T1/ptm/ m/n/10 , [][][]\T1/zi4/m/n/10 file.show[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m /n/10 list.files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 unlink[][][][]\T1 /ptm/m/n/10 , [][][]\T1/zi4/m/n/10 basename[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 15286--15289 [][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Hard _ link$[][ ] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wik i / [235] [236] [237] [238] [239] Underfull \hbox (badness 3965) in paragraph at lines 15590--15594 []\T1/ptm/m/n/10 This is the same com-pu-ta-tion as for the em-pir-i-cal dis-tr i-bu-tion func-tion, and in-deed, [240] [241] [242] [243] [244] [245] [246] [247] Underfull \hbox (badness 5260) in paragraph at lines 16099--16099 []\T1/zi4/m/n/10 big.mark[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 big.interval[]\T1/ ptm/m/n/10 , []\T1/zi4/m/n/10 small.mark[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 sma ll.interval[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 decimal.mark[]\T1/ptm/m/n/10 , [248] [249] [250] [251] Underfull \hbox (badness 4429) in paragraph at lines 16389--16392 []\T1/ptm/m/n/10 an atomic nu-mer-i-cal or char-ac-ter ob-ject, pos-si-bly [][] []\T1/zi4/m/n/10 complex[][][] []\T1/ptm/m/n/10 only for [252] [253] Underfull \hbox (badness 10000) in paragraph at lines 16496--16498 []\T1/ptm/m/n/10 This works via []\T1/zi4/m/n/10 prettyNum()[]\T1/ptm/m/n/10 , which calls []\T1/zi4/m/n/10 .format.zeros(*, [254] Underfull \hbox (badness 2035) in paragraph at lines 16569--16573 []\T1/ptm/m/n/10 The de-fault for []\T1/zi4/m/n/10 decimal.mark []\T1/ptm/m/n/1 0 in []\T1/zi4/m/n/10 formatC() []\T1/ptm/m/n/10 was changed in \T1/phv/m/n/10 R \T1/ptm/m/n/10 3.2.0: for use within [255] Underfull \vbox (badness 10000) has occurred while \output is active [256] [257] [258] [259] [260] [261] [262] [263] [264] Underfull \hbox (badness 2452) in paragraph at lines 17192--17196 []\T1/zi4/m/n/10 gctorture2 []\T1/ptm/m/n/10 can also be in-voked via en-vi-ron -ment vari-ables at the start of the \T1/phv/m/n/10 R \T1/ptm/m/n/10 ses- Underfull \hbox (badness 1147) in paragraph at lines 17192--17196 \T1/ptm/m/n/10 sion. []\T1/zi4/m/n/10 R_GCTORTURE []\T1/ptm/m/n/10 cor-re-spond s to the []\T1/zi4/m/n/10 step []\T1/ptm/m/n/10 ar-gu-ment, []\T1/zi4/m/n/10 R_ GCTORTURE_WAIT []\T1/ptm/m/n/10 to []\T1/zi4/m/n/10 wait[]\T1/ptm/m/n/10 , and [265] [266] [267] Underfull \hbox (badness 1092) in paragraph at lines 17384--17389 [][][]\T1/zi4/m/n/10 library.dynam[][][][]\T1/ptm/m/n/10 , or can be found af-t er the DLL has been loaded us-ing [268] [269] [270] [271] Underfull \hbox (badness 6741) in paragraph at lines 17637--17641 \T1/ptm/m/n/10 Additionally, the list will have an ad-di-tional class, be-ing [ ]\T1/zi4/m/n/10 CRoutine[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 CallRoutine[]\T1/pt m/m/n/10 , [272] [273] [274] [275] [276] [277] [278] [279] [280] [281] [282] [283] Underfull \vbox (badness 10000) has occurred while \output is active [284] [285] [286] [287] [288] [289] [290] [291] [292] [293] Underfull \hbox (badness 1769) in paragraph at lines 19142--19145 []\T1/ptm/m/n/10 a char-ac-ter vec-tor, or an ob-ject to be con-verted to a cha r-ac-ter vec-tor [294] [295] [296] [297] [298] Underfull \hbox (badness 10000) in paragraph at lines 19451--19453 []\T1/ptm/m/n/10 the `root' col-la-tion: see [][]$\T1/zi4/m/n/10 https : / / ww w . unicode . org / reports / tr35 / Underfull \hbox (badness 2088) in paragraph at lines 19457--19466 []\T1/ptm/m/n/10 For the spec-i-fi-ca-tions of `real' ICU lo-cales, see [][]$\T 1/zi4/m/n/10 https : / / unicode-[]org . github . io / icu / [299] [300] [301] [302] [303] [304] [305] [306] [307] [308] Underfull \hbox (badness 1442) in paragraph at lines 20065--20067 []\T1/ptm/m/n/10 the choice of de-fault graph-ics de-vice launched when needed and by [][][]\T1/zi4/m/n/10 dev.new[][][][]\T1/ptm/m/n/10 : see [309] Underfull \hbox (badness 2452) in paragraph at lines 20161--20187 [][][]\T1/zi4/m/n/10 as.character[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.complex[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.double[][][][]\T1/pt m/m/n/10 , [][][]\T1/zi4/m/n/10 as.integer[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/n/10 as.logical[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.raw[][][][] \T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.vector[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 5726) in paragraph at lines 20161--20187 [][][]\T1/zi4/m/n/10 as.call[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.en vironment[][][] [][]is.array[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.ma trix[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.na[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 anyNA[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.nan [][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.finite[][][] [310] [311] [312] [313] [314] [315] Underfull \hbox (badness 1248) in paragraph at lines 20559--20562 []\T1/zi4/m/n/10 is.atomic []\T1/ptm/m/n/10 is true for the [][]atomic[][][] ty pes ([]\T1/zi4/m/n/10 "logical"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "integer"[]\ T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "numeric"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 " complex"[]\T1/ptm/m/n/10 , [316] [317] [318] [319] [320] Underfull \hbox (badness 4739) in paragraph at lines 20828--20830 []\T1/ptm/m/n/10 numeric scalar >= 0. Smaller dif-fer-ences are not con-sid-ere d, see [321] [322] [323] [324] [325] Underfull \vbox (badness 3803) has occurred while \output is active [326] [327] [328] [329] [330] [331] [332] [333] [334] [335] [336] [337] [338] [339] Underfull \hbox (badness 2469) in paragraph at lines 22003--22008 []\T1/ptm/m/n/10 In late 2017 a []\T1/zi4/m/n/10 libcurl []\T1/ptm/m/n/10 in-st al-la-tion was seen di-vided into two li-braries, []\T1/zi4/m/n/10 libcurl []\T 1/ptm/m/n/10 and [340] [341] Underfull \hbox (badness 1675) in paragraph at lines 22090--22099 []\T1/ptm/m/n/10 At startup, the li-brary search path is ini-tial-ized from the en-vi-ron-ment vari-ables []\T1/zi4/m/n/10 R_LIBS[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3189) in paragraph at lines 22100--22113 []\T1/ptm/m/n/10 First, []\T1/zi4/m/n/10 .Library.site []\T1/ptm/m/n/10 is ini- tial-ized from []\T1/zi4/m/n/10 R_LIBS_SITE[]\T1/ptm/m/n/10 . If this is un-set or empty, the Underfull \hbox (badness 10000) in paragraph at lines 22148--22151 []\T1/zi4/m/n/10 LOCALAPPDATA []\T1/ptm/m/n/10 (usu-ally []\T1/zi4/m/n/10 C:\Us ers\username\AppData\Local[]\T1/ptm/m/n/10 ) on Win-dows is a hid- Underfull \hbox (badness 4752) in paragraph at lines 22148--22151 \T1/ptm/m/n/10 den di-rec-tory and may not be viewed by some soft-ware. It may be opened by [342] [343] Underfull \hbox (badness 1014) in paragraph at lines 22282--22287 []\T1/ptm/m/n/10 Normally []\T1/zi4/m/n/10 library []\T1/ptm/m/n/10 re-turns (i n-vis-i-bly) the list of at-tached pack-ages, but []\T1/zi4/m/n/10 TRUE []\T1/p tm/m/n/10 or []\T1/zi4/m/n/10 FALSE []\T1/ptm/m/n/10 if [344] [345] [346] [347] [348] [349] [350] [351] [352] [353] [354] [355] [356] Underfull \hbox (badness 1264) in paragraph at lines 23129--23137 []\T1/ptm/m/n/10 character string. The fol-low-ing cat-e-gories should al-ways be sup-ported: [357] Underfull \hbox (badness 4441) in paragraph at lines 23164--23167 []\T1/ptm/m/n/10 Note that set-ting cat-e-gory []\T1/zi4/m/n/10 "LC_ALL" []\T1/ ptm/m/n/10 sets only cat-e-gories []\T1/zi4/m/n/10 "LC_COLLATE"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "LC_CTYPE"[]\T1/ptm/m/n/10 , [358] [359] [360] [361] [362] [363] [364] [365] [366] [367] [368] [369] Underfull \hbox (badness 5231) in paragraph at lines 23984--23986 []\T1/ptm/m/n/10 The al-go-rithm used by []\T1/zi4/m/n/10 make.unique []\T1/ptm /m/n/10 has the prop-erty that []\T1/zi4/m/n/10 make.unique(c(A, B)) == [370] [371] [372] [373] [374] [375] [376] [377] [378] [379] [380] [381] [382] [383] [384] [385] [386] [387] Underfull \hbox (badness 6380) in paragraph at lines 25098--25104 [][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Data _ compress ion$[][] \T1/ptm/m/n/10 for back-ground on data com-pres- Underfull \hbox (badness 1472) in paragraph at lines 25098--25104 [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Bzip2$[][]\T1/ptm /m/n/10 , and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / XZ _ Utils$[][] [388] [389] [390] [391] [392] [393] [394] [395] Underfull \hbox (badness 2790) in paragraph at lines 25610--25613 []\T1/zi4/m/n/10 packageStartupMessage []\T1/ptm/m/n/10 is a vari-ant whose mes -sages can be sup-pressed sep-a-rately by Underfull \hbox (badness 1571) in paragraph at lines 25610--25613 []\T1/zi4/m/n/10 suppressPackageStartupMessages[]\T1/ptm/m/n/10 . (They are sti ll mes-sages, so can be sup-pressed by [396] [397] [398] [399] [400] Underfull \hbox (badness 1194) in paragraph at lines 25938--25941 []\T1/ptm/m/n/10 The de-fault method for []\T1/zi4/m/n/10 anyNA []\T1/ptm/m/n/1 0 han-dles atomic vec-tors with-out a class and []\T1/zi4/m/n/10 NULL[]\T1/ptm/ m/n/10 . It calls [401] [402] [403] Underfull \hbox (badness 2368) in paragraph at lines 26145--26151 []\T1/ptm/m/n/10 For an [][][]\T1/zi4/m/n/10 environment[][][] env[]\T1/ptm/m/n /10 , []\T1/zi4/m/n/10 names(env) []\T1/ptm/m/n/10 gives the names of the cor-r e-spond-ing list, i.e., [404] [405] [406] [407] [408] [409] Underfull \hbox (badness 10000) in paragraph at lines 26535--26538 []\T1/ptm/m/n/10 optional [][][]\T1/zi4/m/n/10 logical[][][] []\T1/ptm/m/n/10 e ven-tu-ally to be passed to []\T1/zi4/m/n/10 print()[]\T1/ptm/m/n/10 , used by [410] [411] [412] [413] [414] [415] [416] [417] [418] [419] Underfull \hbox (badness 10000) in paragraph at lines 27163--27165 []\T1/zi4/m/n/10 isNamespaceLoaded(pkg) []\T1/ptm/m/n/10 is equiv-a-lent to but more ef-fi-cient than []\T1/zi4/m/n/10 pkg %in% [420] [421] [422] [423] [424] [425] [426] Underfull \hbox (badness 2443) in paragraph at lines 27654--27662 \T1/ptm/m/n/10 suit-able char-ac-ter vec-tors as above, or nu-meric ver-sion ob -jects. For [427] [428] [429] [430] [431] [432] [433] Underfull \hbox (badness 1881) in paragraph at lines 28084--28087 []\T1/ptm/m/n/10 integer value con-trol-ling the print-ing of lan-guage con-str ucts which are Underfull \hbox (badness 6220) in paragraph at lines 28109--28111 []\T1/ptm/m/n/10 Extra command-line ar-gu-ment(s) for non-default meth-ods: see [434] [435] Underfull \hbox (badness 2142) in paragraph at lines 28250--28254 []\T1/ptm/m/n/10 the de-fault pa-per for-mat used by [][][]\T1/zi4/m/n/10 posts cript[][][][]\T1/ptm/m/n/10 ; set by en-vi-ron-ment vari-able Underfull \hbox (badness 1968) in paragraph at lines 28307--28312 []\T1/ptm/m/n/10 the com-mand used by [][][]\T1/zi4/m/n/10 postscript[][][] []\ T1/ptm/m/n/10 for print-ing; set by en-vi-ron-ment vari-able [436] [437] [438] [439] Underfull \hbox (badness 10000) in paragraph at lines 28606--28612 []\T1/ptm/m/n/10 The URL of a Bio-con-duc-tor mir-ror for use by [][][]\T1/zi4/ m/n/10 setRepositories[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 28606--28612 \T1/ptm/m/n/10 e.g. the de-fault `[]\T1/zi4/m/n/10 "https://bioconductor.org"[] \T1/ptm/m/n/10 ' or the Eu-ro-pean mir-ror Underfull \hbox (badness 10000) in paragraph at lines 28606--28612 \T1/ptm/m/n/10 `[]\T1/zi4/m/n/10 "https://bioconductor.statistik.tu-dortmund.de "[]\T1/ptm/m/n/10 '. Can be set by Underfull \hbox (badness 5878) in paragraph at lines 28619--28622 []\T1/ptm/m/n/10 default Cc: ad-dress used by [][][]\T1/zi4/m/n/10 create.post[ ][][] []\T1/ptm/m/n/10 (and hence [][][]\T1/zi4/m/n/10 bug.report[][][] []\T1/p tm/m/n/10 and Underfull \hbox (badness 2689) in paragraph at lines 28645--28647 []\T1/ptm/m/n/10 optional in-te-ger vec-tor for set-ting ports of the in-ter-na l HTTP server, see [440] Underfull \hbox (badness 10000) in paragraph at lines 28691--28696 []\T1/ptm/m/n/10 Used by [][][]\T1/zi4/m/n/10 install.packages[][][] []\T1/ptm/ m/n/10 (and in-di-rectly Underfull \hbox (badness 2529) in paragraph at lines 28697--28708 \T1/ptm/m/n/10 in-di-rectly [][][]\T1/zi4/m/n/10 update.packages[][][][]\T1/ptm /m/n/10 ) on plat-forms which sup-port bi-nary pack-ages. Pos-si- Underfull \hbox (badness 2512) in paragraph at lines 28697--28708 \T1/ptm/m/n/10 ble val-ues are []\T1/zi4/m/n/10 "never"[]\T1/ptm/m/n/10 , []\T1 /zi4/m/n/10 "interactive" []\T1/ptm/m/n/10 (which means ask in in-ter-ac-tive u se and Underfull \hbox (badness 7203) in paragraph at lines 28709--28712 []\T1/ptm/m/n/10 default email-ing method used by [][][]\T1/zi4/m/n/10 create.p ost[][][] []\T1/ptm/m/n/10 and hence [][][]\T1/zi4/m/n/10 bug.report[][][] []\T 1/ptm/m/n/10 and [441] [442] [443] [444] [445] Underfull \vbox (badness 3803) has occurred while \output is active [446] Underfull \hbox (badness 10000) in paragraph at lines 29124--29128 \T1/ptm/m/n/10 el-e-ment []\T1/zi4/m/n/10 A[c(arrayindex.x, arrayindex.y)] = FU N(X[arrayindex.x], Y[arrayindex.y], [447] [448] Underfull \hbox (badness 10000) in paragraph at lines 29271--29274 []\T1/zi4/m/n/10 str2expression(s) []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 str2la ng(s) []\T1/ptm/m/n/10 re-turn spe-cial ver-sions of []\T1/zi4/m/n/10 parse(tex t=s, [449] Underfull \hbox (badness 7925) in paragraph at lines 29352--29356 []\T1/ptm/m/n/10 for a [][][]\T1/zi4/m/n/10 character[][][] []\T1/ptm/m/n/10 ve c-tor []\T1/zi4/m/n/10 s[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 str2expression(s) [ ]\T1/ptm/m/n/10 cor-re-sponds to Underfull \hbox (badness 1253) in paragraph at lines 29352--29356 []\T1/zi4/m/n/10 parse(text = s, keep.source=FALSE)[]\T1/ptm/m/n/10 , which is al-ways of type ([][][]\T1/zi4/m/n/10 typeof[][][][]\T1/ptm/m/n/10 ) and [][][] \T1/zi4/m/n/10 class[][][] Underfull \hbox (badness 2521) in paragraph at lines 29357--29366 []\T1/ptm/m/n/10 for a [][][]\T1/zi4/m/n/10 character[][][] []\T1/ptm/m/n/10 st ring []\T1/zi4/m/n/10 s[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 str2lang(s) []\T1/pt m/m/n/10 cor-re-sponds to []\T1/zi4/m/n/10 parse(text = s, [450] [451] [452] [453] [454] [455] [456] [457] [458] [459] [460] [461] [462] [463] [464] [465] [466] Underfull \hbox (badness 2726) in paragraph at lines 30377--30380 []\T1/ptm/m/n/10 character string (or []\T1/zi4/m/n/10 NULL[]\T1/ptm/m/n/10 ) i n-di-cat-ing [][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 val-ues in printed out-put, see [467] [468] [469] [470] [471] [472] [473] [474] [475] [476] [477] [478] [479] [480] [481] [482] [483] [484] [485] Underfull \vbox (badness 3803) has occurred while \output is active [486] [487] [488] [489] [490] [491] [492] Underfull \hbox (badness 1248) in paragraph at lines 32070--32077 \T1/ptm/m/n/10 uni-form pseudo-random num-ber gen-er-a-tor, \T1/ptm/m/it/10 ACM Trans-ac-tions on Mod-el-ing and Com-puter Underfull \hbox (badness 10000) in paragraph at lines 32070--32077 \T1/ptm/m/n/10 Now see [][]$\T1/zi4/m/n/10 https : / / www . math . sci . hiros hima-[]u . ac . jp / ~m-[]mat / MT / VERSIONS / C-[]LANG / [493] [494] Underfull \hbox (badness 1533) in paragraph at lines 32188--32191 []\T1/ptm/m/n/10 As with all com-piled code, mis-specifying these func-tions ca n crash \T1/phv/m/n/10 R\T1/ptm/m/n/10 . Do in-clude the [495] [496] [497] Underfull \hbox (badness 1163) in paragraph at lines 32359--32370 []\T1/ptm/m/n/10 If all com-po-nents are dif-fer-ent (and no []\T1/zi4/m/n/10 N A[]\T1/ptm/m/n/10 s), the ranks are well de-fined, with val-ues in [498] [499] [500] [501] [502] [503] [504] [505] [506] Underfull \hbox (badness 6300) in paragraph at lines 32907--32909 []\T1/ptm/m/n/10 The sec-tion `Pro-cess-ing doc-u-men-ta-tion files' in the `Wr it-ing R Ex-ten-sions' man-ual: [507] [508] [509] [510] [511] [512] [513] [514] [515] [516] [517] [518] [519] [520] [521] [522] [523] Underfull \hbox (badness 10000) in paragraph at lines 34036--34040 []\T1/zi4/m/n/10 regexpr []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 gregexpr []\T1/p tm/m/n/10 sup-port `named cap-ture'. If groups are named, e.g., Underfull \hbox (badness 1221) in paragraph at lines 34036--34040 []\T1/zi4/m/n/10 "(?[A-Z][a-z]+)" []\T1/ptm/m/n/10 then the po-si-tions of the matches are also re-turned by name. Underfull \hbox (badness 3557) in paragraph at lines 34057--34059 []\T1/ptm/m/n/10 The POSIX 1003.2 stan-dard at [][]$\T1/zi4/m/n/10 https : / / pubs . opengroup . org / onlinepubs / 9699919799 / Underfull \hbox (badness 1122) in paragraph at lines 34060--34064 []\T1/ptm/m/n/10 The []\T1/zi4/m/n/10 pcre2pattern []\T1/ptm/m/n/10 or []\T1/zi 4/m/n/10 pcrepattern man []\T1/ptm/m/n/10 page (found as part of [][]$\T1/zi4/m /n/10 https : / / www . pcre . org / [524] [525] Underfull \vbox (badness 10000) has occurred while \output is active [526] [527] [528] [529] [530] [531] [532] [533] Underfull \hbox (badness 1655) in paragraph at lines 34662--34664 []\T1/ptm/m/n/10 a vec-tor (atomic, not a list) for []\T1/zi4/m/n/10 rle()[]\T1 /ptm/m/n/10 ; an ob-ject of class []\T1/zi4/m/n/10 "rle" []\T1/ptm/m/n/10 for [534] [535] [536] [537] [538] [539] [540] [541] [542] [543] [544] [545] [546] [547] [548] [549] [550] [551] [552] Underfull \hbox (badness 2261) in paragraph at lines 35869--35874 []\T1/ptm/m/n/10 If []\T1/zi4/m/n/10 strip.white []\T1/ptm/m/n/10 is of length 1, it ap-plies to all fields; oth-er-wise, if [553] [554] [555] [556] [557] [558] [559] [560] [561] [562] [563] [564] [565] [566] [567] [568] [569] Underfull \hbox (badness 3668) in paragraph at lines 36945--36949 []\T1/zi4/m/n/10 getAllConnections []\T1/ptm/m/n/10 re-turns a se-quence of in- te-ger con-nec-tion de-scrip-tors for use with [570] Underfull \hbox (badness 10000) in paragraph at lines 37036--37047 \T1/zi4/m/n/10 / / learn . microsoft . com / en-[]us / cpp / c-[]language / par sing-[]c-[]command-[]line-[]arguments ? [571] [572] [573] [574] [575] [576] [577] [578] [579] [580] [581] [582] [583] [584] [585] [586] [587] [588] [589] [590] Underfull \vbox (badness 3803) has occurred while \output is active [591] [592] [593] [594] [595] [596] Underfull \hbox (badness 10000) in paragraph at lines 38675--38677 [][][]$\T1/zi4/m/n/10 https : / / pubs . opengroup . org / onlinepubs / 9699919 799 / functions / snprintf . html$[][] \T1/ptm/m/n/10 for [597] [598] [599] [600] [601] [602] Underfull \hbox (badness 2913) in paragraph at lines 39093--39097 \T1/ptm/m/n/10 ber of nested \T1/phv/m/n/10 R \T1/ptm/m/n/10 ex-pres-sions cur- rently un-der eval-u-a-tion, ex-ceeds the limit set by [603] [604] [605] [606] Underfull \hbox (badness 1072) in paragraph at lines 39339--39343 []\T1/ptm/m/n/10 On front-ends which sup-port it, the com-mands his-tory is rea d from the file spec-i-fied by Underfull \hbox (badness 10000) in paragraph at lines 39344--39348 []\T1/ptm/m/n/10 The command-line op-tion `[]\T1/zi4/m/n/10 --vanilla[]\T1/ptm/ m/n/10 ' im-plies `[]\T1/zi4/m/n/10 --no-site-file[]\T1/ptm/m/n/10 ', `[]\T1/zi 4/m/n/10 --no-init-file[]\T1/ptm/m/n/10 ', Underfull \hbox (badness 10000) in paragraph at lines 39384--39390 []\T1/ptm/m/n/10 On sys-tems with sub-architectures (mainly Win-dows), the file s `\T1/zi4/m/n/10 Renviron.site\T1/ptm/m/n/10 ' Underfull \hbox (badness 10000) in paragraph at lines 39384--39390 \T1/ptm/m/n/10 and `\T1/zi4/m/n/10 Rprofile.site\T1/ptm/m/n/10 ' are looked for first in architecture-specific di-rec-to-ries, Underfull \hbox (badness 1320) in paragraph at lines 39384--39390 \T1/ptm/m/n/10 e.g. `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/i386/R environ.site\T1/ptm/m/n/10 '. And e.g. `\T1/zi4/m/n/10 .Renviron.i386\T1/ptm/m/ n/10 ' will be used in [607] Underfull \hbox (badness 3009) in paragraph at lines 39399--39406 []\T1/ptm/m/n/10 On Unix ver-sions of \T1/phv/m/n/10 R \T1/ptm/m/n/10 there is also a file `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/Renviron\T1/pt m/m/n/10 ' which is read Underfull \hbox (badness 1038) in paragraph at lines 39399--39406 \T1/ptm/m/n/10 very early in the start-up pro-cess-ing. It con-tains en-vi-ron- ment vari-ables set by \T1/phv/m/n/10 R \T1/ptm/m/n/10 in the Underfull \hbox (badness 2573) in paragraph at lines 39399--39406 \T1/ptm/m/n/10 con-fig-ure pro-cess. Val-ues in that file can be over-rid-den i n site or user en-vi-ron-ment Underfull \hbox (badness 1917) in paragraph at lines 39399--39406 \T1/ptm/m/n/10 files: do not change `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/ n/10 /etc/Renviron\T1/ptm/m/n/10 ' it-self. Note that this is dis-tinct from [608] [609] [610] Underfull \hbox (badness 2644) in paragraph at lines 39634--39638 []\T1/ptm/m/n/10 alternative to []\T1/zi4/m/n/10 exprs []\T1/ptm/m/n/10 or []\T 1/zi4/m/n/10 ...[]\T1/ptm/m/n/10 : an `expression-like' ob-ject, typ-i-cally an [611] [612] [613] [614] [615] [616] [617] [618] [619] Underfull \vbox (badness 10000) has occurred while \output is active [620] [621] [622] [623] [624] [625] [626] [627] [628] [629] [630] [631] [632] [633] [634] [635] Underfull \hbox (badness 4144) in paragraph at lines 41182--41190 []\T1/ptm/m/n/10 (for []\T1/zi4/m/n/10 summary.default[]\T1/ptm/m/n/10 ) or [][ ][]\T1/zi4/m/n/10 format[][][]() []\T1/ptm/m/n/10 (for []\T1/zi4/m/n/10 summary .data.frame[]\T1/ptm/m/n/10 ). In Underfull \hbox (badness 1158) in paragraph at lines 41192--41194 []\T1/ptm/m/n/10 integer code used in []\T1/zi4/m/n/10 quantile(*, type=quantil e.type) []\T1/ptm/m/n/10 for the de-fault [636] [637] [638] [639] [640] [641] [642] [643] [644] [645] Underfull \hbox (badness 1137) in paragraph at lines 41802--41808 []\T1/ptm/m/n/10 This ex-pands tilde (see [][]tilde ex-pan-sion[][][]) and wild -cards in file paths. For pre-cise de-tails Underfull \hbox (badness 4967) in paragraph at lines 41820--41825 []\T1/ptm/m/n/10 If a file-name starts with []\T1/zi4/m/n/10 . []\T1/ptm/m/n/10 this may need to be matched ex-plic-itly: for ex-am-ple [646] [647] Underfull \hbox (badness 1616) in paragraph at lines 41943--41948 []\T1/zi4/m/n/10 system("id") []\T1/ptm/m/n/10 is much more portable on Unix-al ikes, pro-vided only the POSIX op-tions [648] [649] [650] [651] Underfull \vbox (badness 3803) has occurred while \output is active [652] [653] [654] [655] [656] Underfull \hbox (badness 1472) in paragraph at lines 42490--42493 []\T1/ptm/m/n/10 logical. If []\T1/zi4/m/n/10 TRUE[]\T1/ptm/m/n/10 , func-tions keep their source in-clud-ing com-ments, see [657] [658] [659] LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/n' instead on input line 42702. [660] [661] [662] [663] [664] [665] [666] [667] [668] [669] [670] [671] Underfull \hbox (badness 10000) in paragraph at lines 43441--43445 []\T1/ptm/m/n/10 On 64-bit plat-forms []\T1/zi4/m/sl/10 bin []\T1/ptm/m/n/10 ca n have $\OT1/cmr/m/n/10 2[]$ \T1/ptm/m/n/10 or more el-e-ments (i.e., []\T1/zi4 /m/sl/10 length(bin) > [672] [673] [674] [675] [676] [677] [678] [679] [680] [681] [682] [683] [684] [685] [686] [687] [688] [689] Underfull \hbox (badness 10000) in paragraph at lines 44635--44638 [][][]$\T1/zi4/m/sl/10 https : / / en . wikipedia . org / wiki / Time _ zone$[] [] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/sl/10 https : / / data . iana . org / time -[]zones / [690] [691] [692] [693] [694] [695] Underfull \vbox (badness 10000) has occurred while \output is active [696] [697] [698] [699] [700] [701] [702] [703] Underfull \hbox (badness 1990) in paragraph at lines 45551--45559 []\T1/zi4/m/sl/10 try []\T1/ptm/m/n/10 eval-u-ates an ex-pres-sion and traps an y er-rors that oc-cur dur-ing the eval-u-a-tion. If Underfull \hbox (badness 4846) in paragraph at lines 45551--45559 \T1/ptm/m/n/10 an er-ror oc-curs then the er-ror mes-sage is printed to the [][ ][]\T1/zi4/m/sl/10 stderr[][][] []\T1/ptm/m/n/10 con-nec-tion un-less [704] [705] [706] [707] [708] [709] [710] [711] [712] [713] [714] [715] [716] [717] [718] [719] [720] [721] [722] [723] [724] [725] Underfull \hbox (badness 1014) in paragraph at lines 46992--46995 []\T1/ptm/m/n/10 logical, in-di-cat-ing if the warn-ing should be out-put im-me -di-ately, even if [726] [727] Underfull \hbox (badness 2401) in paragraph at lines 47125--47129 []\T1/ptm/m/n/10 See the de-scrip-tion of [][][]\T1/zi4/m/sl/10 options[][][](" warn") []\T1/ptm/m/n/10 for the cir-cum-stances un-der which there is a [728] [729] Underfull \hbox (badness 3492) in paragraph at lines 47251--47253 []\T1/zi4/m/sl/10 weekdays []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 months []\T1/ ptm/m/n/10 re-turn a char-ac-ter vec-tor of names in the lo-cale in use, i.e., [730] [731] Underfull \hbox (badness 2111) in paragraph at lines 47337--47342 \T1/ptm/m/n/10 If [][][]\T1/zi4/m/sl/10 names[][][](.dimnames) []\T1/ptm/m/n/10 is not empty, these are used as col-umn names. [732] [733] [734] Underfull \hbox (badness 4001) in paragraph at lines 47585--47587 []\T1/ptm/m/n/10 Thomas Lum-ley (2003) \T1/ptm/m/it/10 Stan-dard non-stan-dard eval-u-a-tion rules\T1/ptm/m/n/10 . [][]$\T1/zi4/m/sl/10 https : / / developer . [735] [736] [737] [738] [739] [740] [741] Underfull \hbox (badness 5417) in paragraph at lines 47987--47991 []\T1/zi4/m/sl/10 .packages() []\T1/ptm/m/n/10 re-turns the names of the cur-re ntly at-tached pack-ages \T1/ptm/m/it/10 in-vis-i-bly \T1/ptm/m/n/10 whereas [742] Underfull \hbox (badness 10000) in paragraph at lines 48048--48052 []\T1/zi4/m/sl/10 .standard_regexps []\T1/ptm/m/n/10 re-turns a list of `stan-d ard' reg-exps, in-clud-ing el-e-ments named [743]) (./compiler-pkg.tex [744] Chapter 2. [745] [746] [747] [748]) (./datasets-pkg.tex Chapter 3. [749] [750] [751] [752] [753] [754] [755] [756] [757] [758] [759] [760] [761] [762] [763] [764] [765] Underfull \hbox (badness 1097) in paragraph at lines 1034--1038 []\T1/ptm/m/n/10 MacDonell, W.R. (1902). On crim-i-nal an-thro-pom-e-try and th e iden-ti-fi-ca-tion of crim-i-nals. [766] [767] [768] [769] [770] [771] [772] [773] [774] [775] Overfull \hbox (5.23488pt too wide) in paragraph at lines 1643--1643 []\T1/zi4/m/n/9 matlines(gait[, -1, 1], gait[, -1, 2], type = "l", lty = 1, co l = adjustcolor("thistle", 1/3))[] [776] [777] [778] [779] [780] [781] [782] [783] [784] [785] [786] [787] [788] [789] [790] [791] [792] [793] [794] [795] [796] [797] [798] [799] [800] [801] [802] [803] [804] [805] [806] [807] [808] [809] [810] [811] Overfull \hbox (2.27475pt too wide) in paragraph at lines 3775--3775 []\T1/zi4/m/n/9 ## From https://pubs.usgs.gov/gip/Elevations-Distances/elvadis t.html#Geographic%20Centers[] [812] [813] [814] [815] [816] [817] [818] [819] [820] [821] [822] [823] [824] [825] [826] [827] [828] [829] [830] [831] [832] [833] [834] [835]) (./grDevices-pkg.tex [836] Chapter 4. [837] [838] [839] [840] [841] Underfull \hbox (badness 2221) in paragraph at lines 284--288 []\T1/ptm/m/n/10 numeric vec-tor of length 3, []\T1/zi4/m/sl/10 c(mi, ma, n.)[] \T1/ptm/m/n/10 , with iden-ti-cal mean-ing to Underfull \hbox (badness 10000) in paragraph at lines 299--304 []\T1/ptm/m/n/10 Apart from that, []\T1/zi4/m/sl/10 axisTicks() []\T1/ptm/m/n/1 0 just calls the C func-tion []\T1/zi4/m/sl/10 CreateAtVector() []\T1/ptm/m/n/1 0 in [842] [843] [844] [845] [846] [847] [848] [849] [850] [851] Underfull \hbox (badness 1424) in paragraph at lines 911--913 [][][]\T1/zi4/m/sl/10 NA[][][] []\T1/ptm/m/n/10 (as in-te-ger or char-ac-ter) a nd []\T1/zi4/m/sl/10 "NA" []\T1/ptm/m/n/10 mean trans-par-ent, which can also b e spec-i-fied as [852] Underfull \vbox (badness 10000) has occurred while \output is active [853] [854] [855] [856] Underfull \hbox (badness 5175) in paragraph at lines 1239--1241 []\T1/ptm/m/n/10 There is cur-rently no doc-u-men-ta-tion about the al-go-rithm . The source code is in [857] [858] Underfull \hbox (badness 2512) in paragraph at lines 1358--1360 []\T1/ptm/m/n/10 For the white points [][]$\T1/zi4/m/sl/10 https : / / web . ar chive . org / web / 20190613001950 / http : / / efg2 . com / [859] [860] [861] [862] [863] Underfull \hbox (badness 1490) in paragraph at lines 1658--1663 \T1/ptm/m/n/10 by [][][]\T1/zi4/m/sl/10 rasterImage[][][] []\T1/ptm/m/n/10 and [][][]\T1/zi4/m/sl/10 grid.raster[][][][]\T1/ptm/m/n/10 ? Pos-si-ble val-ues [] \T1/zi4/m/sl/10 "no"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "yes" []\T1/ptm/m/n/10 and Underfull \hbox (badness 3302) in paragraph at lines 1671--1675 []\T1/ptm/m/n/10 character: Does the de-vice sup-port pat-tern fills? One or mo re of [864] [865] [866] [867] [868] [869] Underfull \hbox (badness 1325) in paragraph at lines 2086--2096 []\T1/zi4/m/sl/10 "png48"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "pngmono"[]\T1/pt m/m/n/10 , []\T1/zi4/m/sl/10 "pnggray"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "png alpha"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "bmp16"[]\T1/ptm/m/n/10 , []\T1/zi4/ m/sl/10 "bmp16m" "bmp256"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "bmp32b"[]\T1/ptm /m/n/10 , [870] [871] Underfull \hbox (badness 10000) in paragraph at lines 2198--2200 []\T1/ptm/m/n/10 The de-fault value when a de-vice is opened is taken from the set-ting of [872] [873] [874] Underfull \hbox (badness 6758) in paragraph at lines 2386--2389 []\T1/ptm/m/n/10 Some other op-tions which can be use-ful (see your Ghostscript doc-u-men-ta-tion) are [875] [876] [877] [878] [879] [880] [881] [882] [883] [884] [885] [886] Underfull \hbox (badness 10000) in paragraph at lines 3143--3144 [887] [888] [889] [890] [891] [892] [893] [894] [895] [896] [897] [898] Underfull \vbox (badness 3803) has occurred while \output is active [899] [900] [901] [902] Underfull \vbox (badness 10000) has occurred while \output is active [903] [904] [905] [906] Underfull \hbox (badness 1418) in paragraph at lines 4429--4436 \T1/ptm/m/n/10 it is one of []\T1/zi4/m/sl/10 "AvantGarde"[]\T1/ptm/m/n/10 , [] \T1/zi4/m/sl/10 "Bookman"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Courier"[]\T1/pt m/m/n/10 , []\T1/zi4/m/sl/10 "Helvetica"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "H elvetica-Narrow"[]\T1/ptm/m/n/10 , [907] [908] [909] [910] Underfull \hbox (badness 1152) in paragraph at lines 4716--4723 []\T1/zi4/m/sl/10 encoding[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 bg[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/sl/10 fg[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 pointsize[]\T1/pt m/m/n/10 , []\T1/zi4/m/sl/10 pagecentre[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 col ormodel[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 useDingbats[]\T1/ptm/m/n/10 , [911] [912] [913] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.symbol}) has been already used, duplicate ignored \relax l.4896 \aliasA{symbol}{plotmath}{symbol} [914] [915] [916] [917] Underfull \vbox (badness 3803) has occurred while \output is active [918] [919] Underfull \hbox (badness 1584) in paragraph at lines 5289--5291 []\T1/ptm/m/n/10 For type []\T1/zi4/m/sl/10 "cairo"[]\T1/ptm/m/n/10 , the []\T1 /zi4/m/sl/10 symbolfamily []\T1/ptm/m/n/10 ar-gu-ment can be sup-plied. See Underfull \hbox (badness 1067) in paragraph at lines 5293--5300 \T1/ptm/m/n/10 The lat-ter will only be avail-able if the sys-tem was com-piled with sup- [920] [921] [922] [923] Underfull \hbox (badness 1377) in paragraph at lines 5595--5600 []\T1/ptm/m/n/10 a char-ac-ter string de-scrib-ing the color model: cur-rently al-lowed val-ues [924] [925] Underfull \hbox (badness 1377) in paragraph at lines 5699--5704 []\T1/ptm/m/n/10 Color mod-els pro-vided for back-wards com-pat-i-bil-ity are [ ]\T1/zi4/m/sl/10 "rgb" []\T1/ptm/m/n/10 (which is RGB+gray) and [926] Underfull \hbox (badness 7344) in paragraph at lines 5768--5770 []\T1/ptm/m/n/10 Support for Com-puter Mod-ern fonts is based on a con-tri-bu-t ion by Brian D'Urso [927] [928] Underfull \hbox (badness 2035) in paragraph at lines 5907--5916 []\T1/ptm/m/n/10 Mappings for a num-ber of stan-dard Adobe fonts (and URW equiv -a-lents) are also pro- Underfull \hbox (badness 10000) in paragraph at lines 5907--5916 \T1/ptm/m/n/10 vided: []\T1/zi4/m/sl/10 "AvantGarde"[]\T1/ptm/m/n/10 , []\T1/zi 4/m/sl/10 "Bookman"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Courier"[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/sl/10 "Helvetica"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Helveti ca-Narrow"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 5907--5916 []\T1/zi4/m/sl/10 "NewCenturySchoolbook"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "P alatino" []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 "Times"[]\T1/ptm/m/n/10 ; []\T1 /zi4/m/sl/10 "URWGothic"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "URWBookman"[]\T1/ ptm/m/n/10 , [929] Underfull \hbox (badness 10000) in paragraph at lines 5973--5978 []\T1/zi4/m/sl/10 BousungEG-Light-GB []\T1/ptm/m/n/10 can be found at [][]$\T1/ zi4/m/sl/10 https : / / ftp . gnu . org / pub / non-[]gnu / [930] [931] [932] Underfull \hbox (badness 1546) in paragraph at lines 6114--6122 []\T1/ptm/m/n/10 arguments []\T1/zi4/m/sl/10 onefile[]\T1/ptm/m/n/10 , []\T1/zi 4/m/sl/10 family[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 title[]\T1/ptm/m/n/10 , [] \T1/zi4/m/sl/10 fonts[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 encoding[]\T1/ptm/m/n /10 , []\T1/zi4/m/sl/10 bg[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 fg[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/sl/10 width[]\T1/ptm/m/n/10 , [933] [934] [935] [936] [937] [938] Underfull \hbox (badness 6625) in paragraph at lines 6558--6561 []\T1/ptm/m/n/10 Murrell, P., Ooms, J., Al-laire, J.J. (2015), "Record-ing and Re-play-ing the Graph- [939] [940] Underfull \hbox (badness 10000) in paragraph at lines 6662--6665 []\T1/zi4/m/sl/10 rgb2hsv []\T1/ptm/m/n/10 trans-forms col-ors from RGB space ( red/green/blue) into HSV space [941] [942] [943] [944] Overfull \hbox (9.73488pt too wide) in paragraph at lines 6899--6899 []\T1/zi4/m/n/9 ## but now, x in [-0.5, 20] -- "too far" ==> "wrap around" pro blem (without \TS1/zi4/m/n/9 '\T1/zi4/m/n/9 continuous=TRUE\TS1/zi4/m/n/9 '\T1/ zi4/m/n/9 ):[] [945] [946] [947] [948] [949] [950] [951] [952] [953] [954] Underfull \hbox (badness 1189) in paragraph at lines 7528--7530 []\T1/ptm/m/n/10 for cairo types, the type of anti-aliasing (if any) to be used . One of [955] Underfull \hbox (badness 10000) in paragraph at lines 7633--7635 []\T1/zi4/m/sl/10 "-*-mincho-%s-%s-*-*-%d-*-*-*-*-*-*-*" []\T1/ptm/m/n/10 for C JK lan-guages and [956] [957] [958] [959] [960] [961] [962] [963] [964]) (./graphics-pkg.tex Chapter 5. [965] [966] [967] [968] [969] [970] [971] [972] [973] [974] [975] Underfull \vbox (badness 3803) has occurred while \output is active [976] [977] [978] [979] [980] [981] Overfull \hbox (12.71341pt too wide) in paragraph at lines 1038--1038 [] \T1/zi4/m/n/9 main = "barplot(Freq ~ Class + Survived, *)", ylab = " # {passengers}", legend.text = TRUE)[] [982] [983] [984] [985] [986] [987] Underfull \hbox (badness 4634) in paragraph at lines 1411--1414 [][][]\T1/zi4/m/sl/10 boxplot.default[][][] []\T1/ptm/m/n/10 which al-ready wor ks nowa-days with data.frames; [][][]\T1/zi4/m/sl/10 boxplot.formula[][][][]\T1 /ptm/m/n/10 , [988] [989] [990] [991] [992] [993] [994] [995] [996] [997] [998] [999] [1000] [1001] [1002] [1003] [1004] Underfull \hbox (badness 1728) in paragraph at lines 2389--2391 []\T1/ptm/m/n/10 a string in-di-cat-ing the x-axis style; use []\T1/zi4/m/sl/10 "n" []\T1/ptm/m/n/10 to sup-press and see also [1005] Underfull \hbox (badness 1009) in paragraph at lines 2482--2489 \T1/ptm/m/n/10 be in as-cend-ing or-der. (The rest of this de-scrip-tion does n ot ap-ply to [1006] [1007] [1008] [1009] [1010] [1011] [1012] [1013] [1014] [1015] [1016] [1017] [1018] [1019] [1020] [1021] [1022] [1023] [1024] [1025] [1026] [1027] [1028] [1029] Underfull \vbox (badness 10000) has occurred while \output is active [1030] Underfull \vbox (badness 10000) has occurred while \output is active [1031] [1032] [1033] [1034] [1035] [1036] [1037] [1038] [1039] [1040] [1041] [1042] Underfull \hbox (badness 3229) in paragraph at lines 4756--4761 []\T1/ptm/m/n/10 a char-ac-ter string in-di-cat-ing if log-a-rith-mic axes are to be used, see [1043] [1044] [1045] [1046] [1047] Underfull \hbox (badness 1107) in paragraph at lines 5255--5261 []\T1/ptm/m/n/10 is []\T1/zi4/m/sl/10 par("cin")/par("pin") []\T1/ptm/m/n/10 sc aled to user co-or-di-nates. Note that []\T1/zi4/m/sl/10 c([][]strwidth[][][](c h), [1048] [1049] Underfull \hbox (badness 10000) in paragraph at lines 5384--5387 [1050 ] Underfull \hbox (badness 10000) in paragraph at lines 5445--5447 Underfull \vbox (badness 10000) has occurred while \output is active [1051] [1052 ] [1053] [1054] [1055] [1056] [1057] [1058] [1059] [1060] [1061] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.plot}) ha s been already used, duplicate ignored \relax l.6120 \aliasA{plot}{plot.default}{plot} [1062] [1063] [1064] [1065] [1066] [1067] [1068] [1069] [1070] [1071] [1072] [1073] [1074] [1075] Overfull \hbox (31.57222pt too wide) in paragraph at lines 7026--7027 [][] [1076] [1077 ] [1078] [1079] [1080] [1081] [1082] [1083] [1084] [1085] [1086] [1087] [1088] [1089] [1090] [1091] [1092] [1093] [1094] [1095] [1096] [1097] [1098] [1099] [1100] [1101] [1102] [1103] [1104] [1105] [1106] [1107] [1108] [1109] [1110] [1111] Underfull \hbox (badness 4954) in paragraph at lines 9140--9142 []\T1/ptm/m/n/10 Sub-title (at bot-tom) us-ing font, size and color []\T1/zi4/m /sl/10 par(c("font.sub", Underfull \hbox (badness 1019) in paragraph at lines 9142--9144 []\T1/ptm/m/n/10 X axis la-bel us-ing font, size and color []\T1/zi4/m/sl/10 pa r(c("font.lab", "cex.lab", [1112] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.units}) h as been already used, duplicate ignored \relax l.9222 \HeaderA{units}{Graphical Units}{units} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.units.1}) has been already used, duplicate ignored \relax l.9222 \HeaderA{units}{Graphical Units}{units} [1113] [1114] [1115] [1116]) (./grid-pkg.tex Chapter 6. [1117] [1118] [1119] [1120] [1121] [1122] [1123] [1124] [1125] Underfull \hbox (badness 2680) in paragraph at lines 551--554 []\T1/ptm/m/n/10 Note that []\T1/zi4/m/sl/10 preDrawDetails []\T1/ptm/m/n/10 an d []\T1/zi4/m/sl/10 postDrawDetails []\T1/ptm/m/n/10 are also called in the cal -cu-la-tion of [1126] [1127] [1128] [1129] [1130] [1131] [1132] [1133] [1134] [1135] [1136] Underfull \hbox (badness 4279) in paragraph at lines 1188--1197 [][][]\T1/ptm/m/n/10 Grid[][][], [][][]\T1/zi4/m/sl/10 pushViewport[][][][]\T1/ ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 popViewport[][][][]\T1/ptm/m/n/10 , [][][]\T 1/zi4/m/sl/10 downViewport[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 seekVi ewport[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 upViewport[][][][]\T1/ptm/ m/n/10 , [][][]\T1/zi4/m/sl/10 unit[][][][]\T1/ptm/m/n/10 , [1137] [1138] [1139] [1140] [1141] [1142] [1143] [1144] [1145] [1146] [1147] [1148] [1149] [1150] [1151] [1152] [1153] [1154] [1155] [1156] [1157] [1158] [1159] [1160] [1161] [1162] [1163] [1164] [1165] [1166] [1167] [1168] Underfull \hbox (badness 10000) in paragraph at lines 3103--3105 []\T1/ptm/m/n/10 A func-tion that re-turns an affine trans-for-ma-tion ma-trix; see [1169] [1170] [1171] [1172] [1173] [1174] [1175] [1176] [1177] [1178] [1179] [1180] [1181] [1182] [1183] [1184] Underfull \vbox (badness 10000) has occurred while \output is active [1185] [1186] [1187] [1188] [1189] [1190] [1191] [1192] [1193] [1194] [1195] [1196] [1197] [1198] Underfull \hbox (badness 1067) in paragraph at lines 4843--4846 []\T1/ptm/m/n/10 Both func-tions cre-ate a seg-ments grob (a graph-i-cal ob-jec t de-scrib-ing seg-ments), but only [1199] [1200] [1201] [1202] [1203] [1204] Underfull \hbox (badness 7256) in paragraph at lines 5194--5196 []\T1/ptm/m/n/10 A char-ac-ter or [][]ex-pres-sion[][][] vec-tor. Other ob-ject s are co-erced by [1205] [1206] [1207] [1208] [1209] [1210] [1211] Underfull \hbox (badness 2142) in paragraph at lines 5648--5652 []\T1/ptm/m/n/10 ob-jects. For []\T1/zi4/m/sl/10 gridGTreeCoords []\T1/ptm/m/n/ 10 a list of ei-ther []\T1/zi4/m/sl/10 "GridGrobCoords" []\T1/ptm/m/n/10 or [1212] [1213] Underfull \hbox (badness 4699) in paragraph at lines 5730--5735 []\T1/ptm/m/n/10 Either a []\T1/zi4/m/sl/10 "GridGrobCoords" []\T1/ptm/m/n/10 o b-ject (a list of lists with com-po-nents []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 y[]\T1/ptm/m/n/10 ) or a [1214] [1215] [1216] [1217] [1218] [1219] [1220] [1221] [1222] [1223] [1224] [1225] [1226] [1227] [1228] [1229] [1230] [1231] [1232] [1233] [1234] [1235] [1236] [1237] [1238] [1239] [1240] [1241] [1242] [1243] [1244] [1245]) (./methods-pkg.tex [1246] Chapter 7. [1247] [1248] [1249] [1250] [1251] [1252] [1253] [1254] Underfull \vbox (badness 10000) has occurred while \output is active [1255] Underfull \vbox (badness 10000) has occurred while \output is active [1256] [1257] [1258] [1259] [1260] [1261] [1262] [1263] [1264] [1265] Underfull \hbox (badness 2237) in paragraph at lines 1383--1385 []\T1/ptm/m/n/10 The class []\T1/zi4/m/sl/10 "className" []\T1/ptm/m/n/10 ex-te nds []\T1/zi4/m/sl/10 "character" []\T1/ptm/m/n/10 and has a slot []\T1/zi4/m/s l/10 "package"[]\T1/ptm/m/n/10 , also of class [1266] [1267] [1268] [1269] [1270] [1271] [1272] [1273] [1274] Underfull \hbox (badness 10000) in paragraph at lines 1979--1984 []\T1/ptm/m/n/10 The ar-gu-ment to []\T1/zi4/m/sl/10 insertSource []\T1/ptm/m/n /10 can be an ob-ject of class Underfull \hbox (badness 1038) in paragraph at lines 1979--1984 \T1/ptm/m/n/10 file name is passed to []\T1/zi4/m/sl/10 insertSource []\T1/ptm/ m/n/10 it calls []\T1/zi4/m/sl/10 evalSource []\T1/ptm/m/n/10 to ob-tain the [1275] [1276] [1277] Underfull \hbox (badness 2213) in paragraph at lines 2211--2216 []\T1/ptm/m/n/10 To re-strict the search to classes in a par-tic-u-lar pack-age , use []\T1/zi4/m/sl/10 where = [1278] [1279] [1280] [1281] [1282] Underfull \hbox (badness 10000) in paragraph at lines 2572--2575 []\T1/ptm/m/n/10 As you might ex-pect [][][]\T1/zi4/m/sl/10 setGeneric[][][] [] \T1/ptm/m/n/10 and [][][]\T1/zi4/m/sl/10 setGroupGeneric[][][] []\T1/ptm/m/n/10 cre-ate ob-jects of class [1283] [1284] Underfull \hbox (badness 1132) in paragraph at lines 2712--2716 []\T1/ptm/m/n/10 In []\T1/zi4/m/sl/10 getGenerics[]\T1/ptm/m/n/10 , if []\T1/zi 4/m/sl/10 TRUE[]\T1/ptm/m/n/10 , the []\T1/zi4/m/sl/10 package []\T1/ptm/m/n/10 slot of the re-turned re-sult is in [1285] Underfull \hbox (badness 1033) in paragraph at lines 2748--2753 \T1/ptm/m/n/10 In ad-di-tion, []\T1/zi4/m/sl/10 removeGeneric []\T1/ptm/m/n/10 re-moves the func-tion it-self; []\T1/zi4/m/sl/10 removeMethods []\T1/ptm/m/n/1 0 re-stores the [1286] [1287] [1288] [1289] [1290] [1291] [1292] Underfull \hbox (badness 1102) in paragraph at lines 3305--3307 []\T1/zi4/m/sl/10 getPackageName []\T1/ptm/m/n/10 re-turns the character-string name of the pack-age (with-out the ex-tra-ne-ous [1293] [1294] [1295] [1296] [1297] Underfull \hbox (badness 10000) in paragraph at lines 3642--3651 []\T1/ptm/m/n/10 The [1298] [1299] Underfull \hbox (badness 10000) in paragraph at lines 3762--3763 [] \T1/zi4/m/sl/10 Pos <- setClass("Pos", slots = c(latitude = "numeric", longi tude = "numeric", [1300] Underfull \hbox (badness 10000) in paragraph at lines 3846--3847 []\T1/zi4/m/sl/10 Currency <- setClass("Currency", slots = c(unit = "character" ), contains = [1301] [1302] [1303] [1304] [1305] [1306] [1307] [1308] [1309] [1310] Underfull \hbox (badness 1769) in paragraph at lines 4477--4483 []\T1/ptm/m/n/10 class [][][]\T1/zi4/m/sl/10 MethodsList[][][] []\T1/ptm/m/n/10 for the ob-jects defin-ing sets of meth-ods as-so-ci-ated with a par-tic-u-lar Underfull \hbox (badness 1939) in paragraph at lines 4477--4483 []\T1/zi4/m/sl/10 MethodDefinition[]\T1/ptm/m/n/10 , or an ex-ten-sion. Class [ ][][]\T1/zi4/m/sl/10 MethodWithNext[][][] []\T1/ptm/m/n/10 for an ex-ten-sion u sed by [1311] [1312] [1313] [1314] [1315] [1316] [1317] [1318] [1319] Underfull \vbox (badness 10000) has occurred while \output is active [1320] [1321] [1322] Underfull \hbox (badness 4036) in paragraph at lines 5379--5382 []\T1/ptm/m/n/10 Object of class []\T1/zi4/m/sl/10 "PossibleMethod" []\T1/ptm/m /n/10 the method to use in re-sponse to a [1323] [1324] Underfull \hbox (badness 3803) in paragraph at lines 5452--5454 []\T1/ptm/m/n/10 arguments to spec-ify prop-er-ties of the new ob-ject, to be p assed to [1325] [1326] [1327] Underfull \hbox (badness 1087) in paragraph at lines 5683--5688 []\T1/ptm/m/n/10 In ad-di-tion, the cur-rently avail-able gener-ics with meth-o ds for this class are found (us-ing [1328] [1329] [1330] [1331] [1332] [1333] [1334] [1335] [1336] Underfull \hbox (badness 1675) in paragraph at lines 6390--6396 []\T1/ptm/m/n/10 can be con-verted ex-plic-itly as []\T1/zi4/m/sl/10 externalRe fMethod(f)[]\T1/ptm/m/n/10 , which re-turns an ob-ject of class [1337] [1338] [1339] [1340] Underfull \vbox (badness 10000) has occurred while \output is active [1341] [1342] [1343] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.S4}) has been already used, duplicate ignored \relax l.6911 \aliasA{S4}{S3Part}{S4} [1344] [1345] [1346] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Complex}) has been already used, duplicate ignored \relax l.7167 \aliasA{Complex}{S4groupGeneric}{Complex} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Logic}) h as been already used, duplicate ignored \relax l.7169 \aliasA{Logic}{S4groupGeneric}{Logic} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Math}) ha s been already used, duplicate ignored \relax l.7170 \aliasA{Math}{S4groupGeneric}{Math} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.matrixOps }) has been already used, duplicate ignored \relax l.7172 ...sA{matrixOps}{S4groupGeneric}{matrixOps} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Ops}) has been already used, duplicate ignored \relax l.7173 \aliasA{Ops}{S4groupGeneric}{Ops} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Summary}) has been already used, duplicate ignored \relax l.7174 \aliasA{Summary}{S4groupGeneric}{Summary} [1347] Underfull \hbox (badness 2050) in paragraph at lines 7236--7240 []\T1/ptm/m/n/10 The mem-bers of the group de-fined by a par-tic-u-lar generic can be ob-tained by call-ing [1348] [1349] [1350] Underfull \hbox (badness 1286) in paragraph at lines 7424--7426 []\T1/ptm/m/n/10 for []\T1/zi4/m/sl/10 .selectSuperClasses() []\T1/ptm/m/n/10 o nly, a [][][]\T1/zi4/m/sl/10 list[][][] []\T1/ptm/m/n/10 of class ex-ten-sions, typ-i-cally [1351] [1352] [1353] [1354] [1355] [1356] [1357] [1358] [1359] [1360] [1361] [1362] [1363] [1364] [1365] [1366] [1367] [1368] [1369] [1370] [1371] [1372] [1373] [1374] [1375] [1376] [1377] [1378] Underfull \vbox (badness 10000) has occurred while \output is active [1379] [1380] [1381] [1382] [1383] [1384] [1385] [1386] [1387] [1388] [1389] [1390] [1391] [1392] Underfull \hbox (badness 1158) in paragraph at lines 10432--10435 []\T1/ptm/m/n/10 Chambers, John M. (2009) \T1/ptm/m/it/10 Class In-her-i-tance in R [][]$\T1/zi4/m/sl/10 https : / / johnmchambers . su . domains / [1393] Underfull \hbox (badness 1852) in paragraph at lines 10510--10514 []\T1/ptm/m/n/10 Each of the classes ex-tends the cor-re-spond-ing un-traced cl ass, from the data part; e.g., [1394] [1395] [1396] [1397]) (./parallel-pkg.tex [1398] Chapter 8. Underfull \hbox (badness 5490) in paragraph at lines 14--16 []\T1/ptm/m/n/10 There is sup-port for mul-ti-ple RNG streams with the `[]\T1/z i4/m/sl/10 "L\TS1/zi4/m/n/10 '\T1/zi4/m/sl/10 Ecuyer-CMRG"[]\T1/ptm/m/n/10 ' [] []RNG[][][]: see [1399] [1400] [1401] [1402] [1403] Underfull \hbox (badness 1320) in paragraph at lines 300--303 []\T1/ptm/m/n/10 It has meth-ods to do so for Linux, ma-cOS, FreeBSD, OpenBSD, So-laris and Win-dows. [1404] [1405] [1406] [1407] [1408] [1409] [1410] [1411] [1412] [1413] [1414] [1415] [1416] [1417] [1418] [1419] [1420] Underfull \hbox (badness 3386) in paragraph at lines 1416--1419 []\T1/ptm/m/n/10 An in-te-ger vec-tor of length 7 as given by []\T1/zi4/m/sl/10 .Random.seed []\T1/ptm/m/n/10 when the [1421] [1422] [1423]) (./splines-pkg.tex [1424] Chapter 9. Underfull \hbox (badness 10000) in paragraph at lines 22--24 []\T1/ptm/m/n/10 Douglas M. Bates \T1/zi4/m/sl/10 \T1/ptm /m/n/10 and William N. Ven-ables [1425] [1426] [1427] [1428] [1429] [1430] [1431] [1432] [1433] [1434] [1435] [1436] [1437] [1438] [1439] [1440]) (./stats-pkg.tex Chapter 10. [1441] [1442] [1443] [1444] [1445] [1446] [1447] [1448] [1449] [1450] [1451] [1452] [1453] [1454] Underfull \hbox (badness 1412) in paragraph at lines 901--903 []\T1/ptm/m/n/10 A fit-ted model ob-ject, for ex-am-ple from []\T1/zi4/m/sl/10 lm []\T1/ptm/m/n/10 or []\T1/zi4/m/sl/10 aov[]\T1/ptm/m/n/10 , or a for-mula fo r [1455] [1456] [1457] [1458] [1459] [1460] [1461] [1462] Underfull \hbox (badness 2503) in paragraph at lines 1389--1392 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1463] [1464] [1465] [1466] [1467] [1468] [1469] [1470] [1471] [1472] [1473] [1474] [1475] [1476] [1477] [1478] [1479] [1480] [1481] [1482] [1483] [1484] [1485] [1486] [1487] [1488] [1489] [1490] [1491] [1492] [1493] [1494] [1495] [1496] Underfull \hbox (badness 2503) in paragraph at lines 3571--3574 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1497] [1498] Package amsmath Warning: Foreign command \atopwithdelims; (amsmath) \frac or \genfrac should be used instead (amsmath) on input line 3684. [1499] [1500] [1501] [1502] [1503] [1504] [1505] [1506] [1507] [1508] [1509] [1510] [1511] [1512] [1513] [1514] [1515] [1516] Underfull \hbox (badness 3989) in paragraph at lines 4830--4837 []\T1/ptm/m/n/10 a nu-meric vec-tor of length 2, equal to say $\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 g[]; g[]\OT1/cmr/m/n/10 )$\T1/ptm/m/n/10 , where $\OML/cmm/m/ it/10 g[] \OT1/cmr/m/n/10 = [1517] [1518] [1519] [1520] [1521] [1522] [1523] [1524] [1525] [1526] Underfull \hbox (badness 2556) in paragraph at lines 5484--5487 []\T1/ptm/m/n/10 character; par-tially matched to []\T1/zi4/m/sl/10 "circular"[ ]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "open"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "filter"[]\T1/ptm/m/n/10 . For [1527] [1528] [1529] [1530] [1531] [1532] [1533] Underfull \hbox (badness 2503) in paragraph at lines 5896--5900 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1534] [1535] [1536] [1537] [1538] [1539] [1540] [1541] [1542] [1543] [1544] [1545] [1546] Underfull \hbox (badness 7081) in paragraph at lines 6695--6698 []\T1/ptm/m/n/10 Objects of class []\T1/zi4/m/sl/10 "hclust" []\T1/ptm/m/n/10 c an be con-verted to class []\T1/zi4/m/sl/10 "dendrogram" []\T1/ptm/m/n/10 us-in g method Underfull \hbox (badness 10000) in paragraph at lines 6699--6701 []\T1/zi4/m/sl/10 rev.dendrogram []\T1/ptm/m/n/10 sim-ply re-turns the den-dro- gram []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 with re-versed nodes, see also [1547] [1548] [1549] [1550] [1551] [1552] Underfull \vbox (badness 10000) has occurred while \output is active [1553] [1554] [1555] Underfull \vbox (badness 10000) has occurred while \output is active [1556] [1557] [1558] [1559] [1560] Underfull \hbox (badness 10000) in paragraph at lines 7595--7598 []\T1/ptm/m/n/10 optionally, the dis-tance method used; re-sult-ing from []\T1/ zi4/m/sl/10 dist()[]\T1/ptm/m/n/10 , the [1561] [1562] [1563] [1564] [1565] [1566] Underfull \vbox (badness 3803) has occurred while \output is active [1567] [1568] [1569] [1570] [1571] [1572] [1573] [1574] [1575] Underfull \hbox (badness 1960) in paragraph at lines 8472--8475 []\T1/ptm/m/n/10 the [][][]\T1/zi4/m/sl/10 na.action[][][] []\T1/ptm/m/n/10 to be used if []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 is used as a for-mula, in which case [1576] [1577] [1578] [1579] [1580] [1581] [1582] Underfull \vbox (badness 3803) has occurred while \output is active [1583] [1584] [1585] [1586] [1587] [1588] Underfull \hbox (badness 2626) in paragraph at lines 9295--9298 []\T1/ptm/m/n/10 Either []\T1/zi4/m/sl/10 "convolution" []\T1/ptm/m/n/10 or []\ T1/zi4/m/sl/10 "recursive" []\T1/ptm/m/n/10 (and can be ab-bre-vi-ated). If [1589] Underfull \hbox (badness 2503) in paragraph at lines 9402--9406 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1590] [1591] [1592] [1593] [1594] [1595] [1596] [1597] [1598] [1599] [1600] [1601] [1602] [1603] [1604] [1605] [1606] [1607] [1608] [1609] [1610] Underfull \hbox (badness 4518) in paragraph at lines 10750--10755 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1611] [1612] [1613] [1614] [1615] Underfull \hbox (badness 2142) in paragraph at lines 11112--11115 []\T1/ptm/m/n/10 positive con-ver-gence tol-er-ance $\OML/cmm/m/it/10 ^^O$\T1/p tm/m/n/10 ; the it-er-a-tions con-verge when $\OMS/cmsy/m/n/10 j\OML/cmm/m/it/1 0 dev \OMS/cmsy/m/n/10 ^^@ Underfull \hbox (badness 1253) in paragraph at lines 11131--11134 []\T1/ptm/m/n/10 When []\T1/zi4/m/sl/10 trace []\T1/ptm/m/n/10 is true, calls t o [][][]\T1/zi4/m/sl/10 cat[][][] []\T1/ptm/m/n/10 pro-duce the out-put for eac h IWLS it-er-a-tion. Hence, [1616] Underfull \hbox (badness 1708) in paragraph at lines 11193--11197 []\T1/ptm/m/n/10 the type of resid-u-als which should be re-turned. The al-ter- na-tives are: [1617] [1618] [1619] [1620] [1621] [1622] Underfull \hbox (badness 1694) in paragraph at lines 11591--11594 []\T1/ptm/m/n/10 character vec-tors with row and col-umn la-bels to use; these de-fault to [1623] [1624] [1625] [1626] [1627] [1628] [1629] [1630] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.hat}) has been already used, duplicate ignored \relax l.12089 \aliasA{hat}{influence.measures}{hat} [1631] [1632] Underfull \hbox (badness 1484) in paragraph at lines 12234--12236 []\T1/ptm/m/n/10 The func-tion []\T1/zi4/m/sl/10 hat() []\T1/ptm/m/n/10 ex-ists mainly for S (ver-sion 2) com-pat-i-bil-ity; we rec-om-mend us-ing [1633] [1634] [1635] [1636] [1637] [1638] [1639] [1640] [1641] [1642] Underfull \hbox (badness 10000) in paragraph at lines 12821--12823 []\T1/ptm/m/n/10 tolerance even-tu-ally passed to [][][]\T1/zi4/m/sl/10 solve.d efault[][][] []\T1/ptm/m/n/10 when []\T1/zi4/m/sl/10 SSinit = [1643] [1644] [1645] [1646] [1647] [1648] Underfull \hbox (badness 2894) in paragraph at lines 13163--13167 []\T1/ptm/m/n/10 logical or in-te-ger num-ber, cur-rently only used in the de-f ault method [1649] [1650] [1651] [1652] [1653] [1654] Underfull \hbox (badness 1496) in paragraph at lines 13591--13597 []\T1/ptm/m/n/10 Gunar Schr�er and Di-et-rich Tren-kler (1995). Ex-act and Ran- dom-iza-tion Dis-tri-bu-tions of [1655] [1656] [1657] [1658] [1659] [1660] [1661] Underfull \hbox (badness 4518) in paragraph at lines 13994--13999 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1662] [1663] [1664] [1665] [1666] [1667] [1668] [1669] [1670] Underfull \hbox (badness 1596) in paragraph at lines 14625--14628 \T1/ptm/m/n/10 to []\T1/zi4/m/sl/10 print(, ...)[]\T1/ptm/m/n/10 , he nce, e.g., []\T1/zi4/m/sl/10 cutoff = []\T1/ptm/m/n/10 ; ig-nored for [1671] Underfull \hbox (badness 4518) in paragraph at lines 14683--14688 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1672] [1673] [1674] Underfull \hbox (badness 6412) in paragraph at lines 14823--14827 []\T1/ptm/m/n/10 Only for the (de-fault) case []\T1/zi4/m/sl/10 (surface = "int erpolate", statistics = Underfull \hbox (badness 1199) in paragraph at lines 14830--14832 []\T1/ptm/m/n/10 the num-ber of it-er-a-tions used in ro-bust fit-ting, i.e. on ly if []\T1/zi4/m/sl/10 family []\T1/ptm/m/n/10 is [1675] [1676] [1677] [1678] [1679] [1680] [1681] [1682] [1683] [1684] [1685] [1686] [1687] [1688] [1689] [1690] [1691] [1692] Underfull \hbox (badness 2503) in paragraph at lines 15907--15911 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1693] [1694] [1695] [1696] [1697] [1698] [1699] [1700] Underfull \hbox (badness 10000) in paragraph at lines 16420--16426 []\T1/zi4/m/sl/10 model.extract(m, "offset") []\T1/ptm/m/n/10 and []\T1/zi4/m/s l/10 model.extract(m, "response") []\T1/ptm/m/n/10 are equiv-a-lent to Underfull \hbox (badness 1867) in paragraph at lines 16420--16426 []\T1/zi4/m/sl/10 model.offset(m) []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 model. response(m) []\T1/ptm/m/n/10 re-spec-tively. []\T1/zi4/m/sl/10 model.offset []\ T1/ptm/m/n/10 sums any terms [1701] [1702] [1703] [1704] [1705] [1706] [1707] [1708] [1709] [1710] [1711] [1712] [1713] [1714] [1715] [1716] [1717] [1718] [1719] [1720] [1721] [1722] [1723] [1724] [1725] [1726] [1727] Underfull \hbox (badness 1158) in paragraph at lines 18078--18081 []\T1/ptm/m/n/10 the ex-pres-sion that was passed to []\T1/zi4/m/sl/10 nls []\T 1/ptm/m/n/10 as the data ar-gu-ment. The ac- [1728] [1729] Underfull \vbox (badness 10000) has occurred while \output is active [1730] Underfull \vbox (badness 10000) has occurred while \output is active [1731] [1732] [1733] [1734] [1735] [1736] [1737] [1738] [1739] [1740] [1741] [1742] [1743] [1744] Underfull \hbox (badness 1377) in paragraph at lines 19123--19128 []\T1/ptm/m/n/10 A vec-tor of scal-ing val-ues for the pa-ram-e-ters. Op-ti-miz a-tion is per-formed on Underfull \hbox (badness 1735) in paragraph at lines 19128--19131 []\T1/ptm/m/n/10 A vec-tor of step sizes for the finite-difference ap-prox-i-ma -tion to the gra-di-ent, on Underfull \hbox (badness 2343) in paragraph at lines 19141--19145 []\T1/ptm/m/n/10 Relative con-ver-gence tol-er-ance. The al-go-rithm stops if i t is un-able to re-duce Underfull \hbox (badness 3471) in paragraph at lines 19141--19145 \T1/ptm/m/n/10 the value by a fac-tor of []\T1/zi4/m/sl/10 reltol * (abs(val) + reltol) []\T1/ptm/m/n/10 at a step. De-faults to Underfull \hbox (badness 2662) in paragraph at lines 19149--19153 []\T1/ptm/m/n/10 The fre-quency of re-ports for the []\T1/zi4/m/sl/10 "BFGS"[]\ T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "L-BFGS-B" []\T1/ptm/m/n/10 and []\T1/zi4/m/s l/10 "SANN" []\T1/ptm/m/n/10 meth-ods if [1745] [1746] [1747] Underfull \vbox (badness 10000) has occurred while \output is active [1748] Overfull \hbox (15.73795pt too wide) in paragraph at lines 19374--19374 []\T1/zi4/m/n/9 ## 1-D minimization: "Brent" or optimize() being preferred.. b ut NM may be ok and "unavoidable",[] Overfull \hbox (3.75941pt too wide) in paragraph at lines 19377--19377 []\T1/zi4/m/n/9 system.time(ro <- optim(1, function(x) (x-pi)^2, control=list( warn.1d.NelderMead = FALSE)))[] [1749] [1750] [1751] [1752] [1753] [1754] [1755] Underfull \hbox (badness 1337) in paragraph at lines 19839--19842 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1756] [1757] [1758] [1759] [1760] [1761] [1762] [1763] [1764] Underfull \hbox (badness 10000) in paragraph at lines 20308--20314 \T1/zi4/m/sl/10 legend = "Cook\TS1/zi4/m/n/10 '\T1/zi4/m/sl/10 s distance", lty = cook.lty, col = cook.col, text.col [1765] [1766] [1767] [1768] [1769] [1770] [1771] Underfull \hbox (badness 1194) in paragraph at lines 20735--20738 []\T1/ptm/m/n/10 coverage prob-a-bil-ity for con-fi-dence in-ter-val. Plot-ting of the con-fi-dence [1772] [1773] [1774] [1775] [1776] [1777] Underfull \hbox (badness 2503) in paragraph at lines 21113--21116 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3919) in paragraph at lines 21140--21142 []\T1/ptm/m/n/10 the char-ac-ter string []\T1/zi4/m/sl/10 "Exact Poisson test" []\T1/ptm/m/n/10 or []\T1/zi4/m/sl/10 "Comparison of Poisson [1778] [1779] [1780] [1781] [1782] [1783] [1784] [1785] [1786] [1787] [1788] [1789] [1790] [1791] [1792] [1793] [1794] [1795] Underfull \hbox (badness 10000) in paragraph at lines 22218--22224 []\T1/ptm/m/n/10 For time-series pre-dic-tion, [][][]\T1/zi4/m/sl/10 predict.ar [][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 predict.Arima[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/sl/10 predict.arima0[][][][]\T1/ptm/m/n/10 , [1796] [1797] [1798] [1799] [1800] [1801] [1802] [1803] [1804] [1805] [1806] [1807] [1808] [1809] [1810] [1811] [1812] [1813] [1814] [1815] [1816] [1817] [1818] [1819] [1820] Underfull \hbox (badness 1337) in paragraph at lines 23694--23700 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1821] [1822] [1823] [1824] [1825] [1826] [1827] [1828] Underfull \hbox (badness 1436) in paragraph at lines 24186--24189 \T1/ptm/m/n/10 per-cent-ages. In \T1/phv/m/n/10 R \T1/ptm/m/n/10 ver-sions up t o 4.0.x, this had been set to []\T1/zi4/m/sl/10 max(2, Underfull \hbox (badness 1009) in paragraph at lines 24189--24192 []\T1/ptm/m/n/10 small non-negative num-ber to pro-tect against round-ing er-ro rs when []\T1/zi4/m/sl/10 j <- [1829] [1830] Underfull \hbox (badness 10000) in paragraph at lines 24341--24342 []\T1/ptm/m/n/10 Wikipedia: [][]$\T1/zi4/m/sl/10 https : / / en . wikipedia . o rg / wiki / Quantile # Estimating _ quantiles _ from _ a _ [1831] [1832] [1833] [1834] [1835] [1836] [1837] [1838] [1839] [1840] [1841] [1842] [1843] [1844] [1845] [1846] Underfull \hbox (badness 1824) in paragraph at lines 25313--25319 []\T1/ptm/m/n/10 Here, all the NAs in []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 are first re-placed by al-ter- Underfull \hbox (badness 1033) in paragraph at lines 25313--25319 \T1/ptm/m/n/10 nat-ing $\OMS/cmsy/m/n/10 ^^F\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 where $\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 is a ``Big'' num-ber (with $\OT1/cmr/ m/n/10 2\OML/cmm/m/it/10 B < M\OMS/cmsy/m/n/10 ^^C$\T1/ptm/m/n/10 , where Underfull \hbox (badness 10000) in paragraph at lines 25334--25337 []\T1/ptm/m/n/10 Apart from the end val-ues, the re-sult []\T1/zi4/m/sl/10 y = runmed(x, k) []\T1/ptm/m/n/10 sim-ply has []\T1/zi4/m/sl/10 y[j] = [1847] [1848] [1849] [1850] [1851] [1852] [1853] [1854] Underfull \vbox (badness 10000) has occurred while \output is active [1855] [1856] Underfull \hbox (badness 2165) in paragraph at lines 25909--25914 []\T1/ptm/m/n/10 Each of the fol-low-ing are []\T1/zi4/m/sl/10 "selfStart" []\T 1/ptm/m/n/10 mod-els (with ex-am-ples) [][][]\T1/zi4/m/sl/10 SSasymp[][][][]\T1 /ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 SSasympOff[][][][]\T1/ptm/m/n/10 , [1857] [1858] [1859] Underfull \hbox (badness 1867) in paragraph at lines 26119--26121 []\T1/ptm/m/n/10 potentially fur-ther ar-gu-ments passed to and from meth-ods. Passed to Underfull \hbox (badness 10000) in paragraph at lines 26135--26139 []\T1/ptm/m/n/10 where []\T1/zi4/m/sl/10 NN <- [][]nobs[][][](object, use.fallb ack = use.fallback) []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 PP <- [1860] [1861] [1862] [1863] [1864] [1865] [1866] [1867] [1868] [1869] [1870] [1871] [1872] [1873] [1874] [1875] [1876] [1877] [1878] [1879] [1880] [1881] [1882] [1883] [1884] [1885] Underfull \vbox (badness 10000) has occurred while \output is active [1886] Underfull \hbox (badness 3514) in paragraph at lines 27787--27792 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1887] [1888] [1889] [1890] Overfull \hbox (2.23795pt too wide) in paragraph at lines 28021--28021 [] \T1/zi4/m/n/9 quote({f(t[0.5]) == frac(phi[1],2)}~{} %=>% {}~~{t[0.5] == frac(log(2), e^{phi[2]})}),[] [1891] Underfull \hbox (badness 3514) in paragraph at lines 28057--28063 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1892] Overfull \hbox (14.22568pt too wide) in paragraph at lines 28117--28117 [] \T1/zi4/m/n/9 control = list(scaleOffset=1, printEval=TRUE, tol= 1e-11, nDcentral=TRUE), trace=TRUE)[] [1893] [1894] [1895] Underfull \hbox (badness 3514) in paragraph at lines 28290--28295 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1896] [1897] Underfull \hbox (badness 3514) in paragraph at lines 28377--28382 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1898] Underfull \hbox (badness 3514) in paragraph at lines 28442--28447 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1899] [1900] Underfull \hbox (badness 3514) in paragraph at lines 28536--28541 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1901] Underfull \hbox (badness 6691) in paragraph at lines 28628--28633 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 x[] \T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1902] [1903] [1904] [1905] [1906] [1907] [1908] [1909] Underfull \hbox (badness 4024) in paragraph at lines 29115--29118 []\T1/ptm/m/n/10 the span (in lags) of the loess win-dow for trend ex-trac-tion , which [1910] [1911] [1912] [1913] [1914] [1915] [1916] [1917] [1918] [1919] Underfull \hbox (badness 5431) in paragraph at lines 29725--29727 []\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above []\T1 /zi4/m/sl/10 cov.unscaled[]\T1/ptm/m/n/10 , if [1920] [1921] [1922] [1923] Underfull \hbox (badness 5431) in paragraph at lines 29935--29938 []\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above []\T1 /zi4/m/sl/10 cov.unscaled[]\T1/ptm/m/n/10 , if [1924] [1925] [1926] [1927] [1928] Underfull \hbox (badness 1337) in paragraph at lines 30250--30254 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1929] [1930] [1931] Underfull \hbox (badness 1127) in paragraph at lines 30387--30390 []\T1/ptm/m/n/10 non-centrality pa-ram-e-ter $\OML/cmm/m/it/10 ^^N$\T1/ptm/m/n/ 10 ; cur-rently ex-cept for []\T1/zi4/m/sl/10 rt()[]\T1/ptm/m/n/10 , ac-cu-rate only for [1932] [1933] [1934] Underfull \hbox (badness 1616) in paragraph at lines 30593--30596 []\T1/ptm/m/n/10 color, plot-ting char-ac-ter ex-pan-sion and type for par-tial resid-u-als, when [1935] [1936] [1937] [1938] [1939] [1940] [1941] [1942] [1943] [1944] [1945] [1946] [1947] [1948] [1949] [1950] [1951] [1952] [1953] [1954] Underfull \hbox (badness 3557) in paragraph at lines 31823--31827 []\T1/ptm/m/n/10 Setting []\T1/zi4/m/sl/10 extendInt []\T1/ptm/m/n/10 to a non- []\T1/zi4/m/sl/10 "no" []\T1/ptm/m/n/10 string, means search-ing for the cor-re ct []\T1/zi4/m/sl/10 interval = [1955] [1956] [1957] Underfull \vbox (badness 10000) has occurred while \output is active [1958] [1959] [1960] Underfull \hbox (badness 1337) in paragraph at lines 32190--32194 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1961] [1962] [1963] [1964] [1965] [1966] [1967] [1968] [1969] Underfull \hbox (badness 1337) in paragraph at lines 32718--32722 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1970] [1971] [1972] Overfull \hbox (0.71648pt too wide) in paragraph at lines 32926--32926 []\T1/zi4/m/n/9 wilcox.test( 4:2, 3:1, paired=TRUE) # Warning: canno t compute exact p-value with ties[] [1973] [1974] [1975] Overfull \hbox (19.71954pt too wide) in paragraph at lines 33087--33087 [] \T1/zi4/m/sl/10 frequency = NULL, deltat = NULL, extend = FALSE, ts.ep s = getOption("ts.eps"), ...)[] [1976] [1977] [1978] [1979] [1980]) (./stats4-pkg.tex Chapter 11. [1981] [1982] [1983] Underfull \vbox (badness 10000) has occurred while \output is active [1984] Underfull \vbox (badness 10000) has occurred while \output is active [1985] [1986] [1987] [1988] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.show.Rdas h.methods}) has been already used, duplicate ignored \relax l.503 ...Package \pkg{stats4}}{show.Rdash.methods} [1989] [1990] [1991]) (./tcltk-pkg.tex [1992] Chapter 12. [1993] [1994] [1995] [1996] [1997] [1998] [1999] Underfull \vbox (badness 10000) has occurred while \output is active [2000] Underfull \vbox (badness 10000) has occurred while \output is active [2001] Underfull \hbox (badness 1546) in paragraph at lines 672--679 []\T1/zi4/m/sl/10 tcl []\T1/ptm/m/n/10 pro-vides a generic in-ter-face to call- ing any Tk or Tcl com-mand by sim-ply run-ning [2002] [2003] [2004] [2005] [2006] Underfull \vbox (badness 10000) has occurred while \output is active [2007] [2008] [2009] [2010] [2011] [2012] [2013] [2014]) (./tools-pkg.tex Chapter 13. [2015] LaTeX Font Warning: Font shape `T1/zi4/m/it' undefined (Font) using `T1/zi4/m/n' instead on input line 72. [2016] Underfull \hbox (badness 3039) in paragraph at lines 167--170 []\T1/zi4/m/sl/10 assertWarning() []\T1/ptm/m/n/10 as-serts that a warn-ing wil l be sig-nalled, but \T1/ptm/m/it/10 not \T1/ptm/m/n/10 an er-ror, whereas [2017] [2018] [2019] Underfull \hbox (badness 1308) in paragraph at lines 326--339 []\T1/ptm/m/n/10 At a min-i-mum, the en-vi-ron-ment should con-tain rou-tines t o ren-der each of the 12 types Underfull \hbox (badness 4967) in paragraph at lines 326--339 \T1/ptm/m/n/10 of bib-li-o-graphic en-try sup-ported by [][][]\T1/zi4/m/sl/10 b ibentry[][][] []\T1/ptm/m/n/10 as well as sev-eral other rou-tines de- Underfull \hbox (badness 10000) in paragraph at lines 326--339 []\T1/zi4/m/sl/10 formatIncollection[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 format InProceedings[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatManual[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatMastersthesis[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 326--339 []\T1/zi4/m/sl/10 formatMisc[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatPhdthesi s[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatProceedings[]\T1/ptm/m/n/10 , []\T1 /zi4/m/sl/10 formatTechreport []\T1/ptm/m/n/10 and [2020] [2021] Underfull \hbox (badness 3039) in paragraph at lines 430--432 []\T1/zi4/m/sl/10 NULL []\T1/ptm/m/n/10 or char-ac-ter; name of vi-gnette en-gi ne to use. Over-rides any [2022] Underfull \hbox (badness 1142) in paragraph at lines 502--506 \T1/ptm/m/n/10 If given, vi-gnette source files are by de-fault looked for in s ub-di-rec-tory [2023] [2024] [2025] [2026] [2027] [2028] [2029] [2030] [2031] [2032] [2033] [2034] [2035] Underfull \hbox (badness 1014) in paragraph at lines 1258--1260 []\T1/ptm/m/n/10 a log-i-cal in-di-cat-ing whether to also sum-ma-rize the re-v erse de-pen-den-cies Underfull \hbox (badness 7238) in paragraph at lines 1264--1266 []\T1/ptm/m/n/10 a char-ac-ter string giv-ing the path to the di-rec-tory of a pre-vi-ous [2036] Underfull \hbox (badness 10000) in paragraph at lines 1301--1304 []\T1/ptm/m/n/10 Results and tim-ings can con-ve-niently be sum-ma-rized us-ing Overfull \hbox (15.52087pt too wide) in paragraph at lines 1301--1304 []\T1/zi4/m/sl/10 summarize_check_packages_in_dir_results []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 summarize_check_packages_in_dir_timings[]\T1/ptm/m/n/10 , [2037] [2038] [2039] [2040] [2041] [2042] Underfull \hbox (badness 10000) in paragraph at lines 1696--1707 []\T1/ptm/m/n/10 Functions []\T1/zi4/m/sl/10 CRAN_package_db()[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 CRAN_check_results()[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 CR AN_check_details() []\T1/ptm/m/n/10 and [2043] [2044] Underfull \hbox (badness 4096) in paragraph at lines 1847--1855 \T1/zi4/m/sl/10 "Imports", "LinkingTo", "Suggests", "Enhances")[]\T1/ptm/m/n/10 . Char-ac-ter string [2045] Underfull \hbox (badness 1082) in paragraph at lines 1857--1859 []\T1/ptm/m/n/10 a char-ac-ter vec-tor of \T1/phv/m/n/10 R \T1/ptm/m/n/10 li-br ary trees, or []\T1/zi4/m/sl/10 NULL []\T1/ptm/m/n/10 for all known trees (see [2046] [2047] [2048] [2049] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.GSC}) has been already used, duplicate ignored \relax l.2102 \aliasA{GSC}{find\_gs\_cmd}{GSC} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.R.Rul.GSC MD}) has been already used, duplicate ignored \relax l.2103 ...sA{R\_GSCMD}{find\_gs\_cmd}{R.Rul.GSCMD} [2050] [2051] [2052] [2053] [2054] [2055] [2056] [2057] Underfull \hbox (badness 3386) in paragraph at lines 2644--2647 []\T1/ptm/m/n/10 The de-fault method of []\T1/zi4/m/sl/10 as.Rconcordance []\T1 /ptm/m/n/10 searches for strings match-ing the pat-tern of [2058] [2059] [2060] Underfull \hbox (badness 4096) in paragraph at lines 2791--2799 \T1/zi4/m/sl/10 "Imports", "LinkingTo", "Suggests", "Enhances")[]\T1/ptm/m/n/10 . Char-ac-ter string [2061] [2062] [2063] [2064] [2065] [2066] [2067] [2068] [2069] [2070] [2071] [2072] [2073] [2074] [2075] [2076] Underfull \hbox (badness 1424) in paragraph at lines 3815--3817 []\T1/zi4/m/sl/10 NULL []\T1/ptm/m/n/10 or a named (by top-ics) char-ac-ter vec -tor of links, as re-turned by [2077] [2078] [2079] [2080] [2081] [2082] [2083] [2084] [2085] [2086] [2087] [2088] Underfull \hbox (badness 10000) in paragraph at lines 4591--4593 []\T1/ptm/m/n/10 additional ar-gu-ments use when prepar-ing the files to be run , [2089] [2090] [2091] [2092] [2093] [2094] Overfull \hbox (6.71034pt too wide) in paragraph at lines 4913--4913 []\T1/zi4/m/n/9 toTitleCase("a small fox is jumping") # "a Small Fox is .." (the \TS1/zi4/m/n/9 '\T1/zi4/m/n/9 a\TS1/zi4/m/n/9 ' \T1/zi4/m/n/9 may cha nge)% i.e. BUG[] [2095] [2096] [2097] Underfull \hbox (badness 1796) in paragraph at lines 5122--5127 []\T1/ptm/m/n/10 Users should ex-pect sig-nif-i-cantly smaller speedups over [] \T1/zi4/m/sl/10 write_PACKAGES []\T1/ptm/m/n/10 in the []\T1/zi4/m/sl/10 type = = [2098] Underfull \hbox (badness 1838) in paragraph at lines 5208--5214 []\T1/ptm/m/n/10 The re-main-ing steps are done only if file `\T1/zi4/m/sl/10 p o/\T1/ptm/m/sl/10 pkgname\T1/zi4/m/sl/10 .pot\T1/ptm/m/n/10 ' al-ready ex-ists. The Underfull \hbox (badness 10000) in paragraph at lines 5208--5214 \T1/ptm/m/n/10 `\T1/zi4/m/sl/10 src/*.{c,cc,cpp,m,mm}\T1/ptm/m/n/10 ' files in the pack-age are ex-am-ined to cre-ate a file [2099] [2100] [2101] [2102] [2103] [2104] Underfull \hbox (badness 2197) in paragraph at lines 5560--5570 []\T1/ptm/m/n/10 The de-fault cor-re-sponds to the fields needed by [][][]\T1/z i4/m/sl/10 available.packages[][][][]\T1/ptm/m/n/10 : [2105] Underfull \hbox (badness 1571) in paragraph at lines 5626--5630 []\T1/ptm/m/n/10 For a re-mote repos-i-tory there is a trade-off be-tween down- load speed and time spent by [2106] [2107] [2108] [2109]) (./utils-pkg.tex [2110] Chapter 14. [2111] Underfull \hbox (badness 2556) in paragraph at lines 47--52 []\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `[] \T1/zi4/m/sl/10 insertions[]\T1/ptm/m/n/10 ', [2112] [2113] [2114] [2115] [2116] [2117] [2118] [2119] [2120] [2121] Underfull \hbox (badness 10000) in paragraph at lines 728--734 []\T1/ptm/m/n/10 Functions []\T1/zi4/m/sl/10 aspell_package_Rd_files[]\T1/ptm/m /n/10 , []\T1/zi4/m/sl/10 aspell_package_vignettes[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3343) in paragraph at lines 728--734 []\T1/zi4/m/sl/10 aspell_package_R_files []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 aspell_package_C_files []\T1/ptm/m/n/10 per-form spell check-ing on the [2122] [2123] [2124] Underfull \hbox (badness 3861) in paragraph at lines 943--948 []\T1/ptm/m/n/10 Where pro-vided by the repos-i-tory, fields []\T1/zi4/m/sl/10 "OS_type"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "License"[]\T1/ptm/m/n/10 , []\T1 /zi4/m/sl/10 "License_is_FOSS"[]\T1/ptm/m/n/10 , [2125] [2126] [2127] Underfull \hbox (badness 10000) in paragraph at lines 1148--1150 []\T1/ptm/m/n/10 logical in-di-cat-ing if biben-tries should be sorted, us-ing [2128] [2129] [2130] Underfull \vbox (badness 3803) has occurred while \output is active [2131] [2132] [2133] [2134] [2135] [2136] Underfull \hbox (badness 1371) in paragraph at lines 1675--1677 []\T1/ptm/m/n/10 additional named ar-gu-ments such as []\T1/zi4/m/sl/10 method []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 ccaddress []\T1/ptm/m/n/10 to pass to [2137] [2138] [2139] [2140] [2141] [2142] [2143] [2144] [2145] [2146] [2147] Underfull \hbox (badness 2057) in paragraph at lines 2395--2397 []\T1/ptm/m/n/10 None for []\T1/zi4/m/sl/10 chooseCRANmirror()[]\T1/ptm/m/n/10 , this func-tion is in-voked for its side ef-fect of up-dat-ing [2148] [2149] Underfull \hbox (badness 2150) in paragraph at lines 2481--2488 []\T1/ptm/m/n/10 If the ob-ject re-turned by []\T1/zi4/m/sl/10 citation() []\T1 /ptm/m/n/10 con-tains only one ref-er-ence, the as-so-ci-ated print Underfull \hbox (badness 1400) in paragraph at lines 2481--2488 \T1/ptm/m/n/10 method shows both a text ver-sion and a Bib-TeX en-try for it. I f a pack-age has more [2150] [2151] [2152] [2153] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.clipboard }) has been already used, duplicate ignored \relax l.2758 ... the Clipboard in MS Windows}{clipboard} [2154] [2155] [2156] [2157] [2158] [2159] [2160] [2161] [2162] [2163] [2164] [2165] [2166] [2167] [2168] [2169] [2170] [2171] [2172] [2173] [2174] Underfull \hbox (badness 6842) in paragraph at lines 4068--4073 []\T1/ptm/m/n/10 Support for method []\T1/zi4/m/sl/10 "libcurl" []\T1/ptm/m/n/1 0 was op-tional on Win-dows prior to \T1/phv/m/n/10 R \T1/ptm/m/n/10 4.2.0: use [2175] Underfull \hbox (badness 1430) in paragraph at lines 4131--4135 []\T1/ptm/m/n/10 The level of de-tail pro-vided dur-ing trans-fer can be set by the []\T1/zi4/m/sl/10 quiet []\T1/ptm/m/n/10 ar-gu-ment and the [2176] Underfull \hbox (badness 1184) in paragraph at lines 4207--4223 []\T1/ptm/m/n/10 On Win-dows with []\T1/zi4/m/sl/10 method = "libcurl"[]\T1/ptm /m/n/10 , the CA root cer-tifi-cates are pro-vided by the OS Underfull \hbox (badness 1019) in paragraph at lines 4207--4223 \T1/ptm/m/n/10 con-tain-ing `[]\T1/zi4/m/sl/10 "Schannel"[]\T1/ptm/m/n/10 '. If it does not, for ver-i-fi-ca-tion to be on the en-vi-ron-ment vari- Underfull \hbox (badness 1668) in paragraph at lines 4207--4223 \T1/ptm/m/n/10 able []\T1/zi4/m/sl/10 CURL_CA_BUNDLE []\T1/ptm/m/n/10 must be s et to a path to a cer-tifi-cate bun-dle file, usu-ally named [2177] [2178] Underfull \hbox (badness 10000) in paragraph at lines 4357--4359 []\T1/ptm/m/n/10 additional ar-gu-ments to be passed to [][][]\T1/zi4/m/sl/10 d ownload.file[][][] []\T1/ptm/m/n/10 and [2179] [2180] [2181] [2182] [2183] [2184] [2185] [2186] [2187] [2188] [2189] [2190] [2191] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.format}) has been already used, duplicate ignored \relax l.5136 ...mat Unordered and Ordered Lists}{format} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.format.1} ) has been already used, duplicate ignored \relax l.5136 ...mat Unordered and Ordered Lists}{format} [2192] [2193] [2194] [2195] [2196] [2197] [2198] [2199] Underfull \hbox (badness 1622) in paragraph at lines 5659--5663 []\T1/ptm/m/n/10 This func-tion will search for Win-dows han-dles, for pass-ing to ex-ter-nal GUIs or to the [2200] [2201] [2202] [2203] [2204] [2205] Underfull \hbox (badness 1448) in paragraph at lines 6044--6049 []\T1/ptm/m/n/10 External pointer ob-jects are com-pared as ref-er-ence ob-ject s, cor-re-spond-ing to call-ing [2206] [2207] [2208] [2209] [2210] [2211] [2212] [2213] Underfull \hbox (badness 1371) in paragraph at lines 6602--6604 []\T1/ptm/m/n/10 additional named ar-gu-ments such as []\T1/zi4/m/sl/10 method []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 ccaddress []\T1/ptm/m/n/10 to pass to [2214] [2215] Underfull \hbox (badness 1502) in paragraph at lines 6691--6697 []\T1/ptm/m/n/10 a char-ac-ter string to be matched in the help page `key-words '. `Key- Underfull \hbox (badness 2103) in paragraph at lines 6691--6697 \T1/ptm/m/n/10 words' are re-ally cat-e-gories: the stan-dard cat-e-gories are listed in file [2216] [2217] [2218] Underfull \hbox (badness 10000) in paragraph at lines 6871--6880 []\T1/ptm/m/n/10 One of the links on the in-dex page is the HTML pack-age in-de x, Underfull \hbox (badness 3354) in paragraph at lines 6871--6880 \T1/ptm/m/n/10 `\T1/ptm/m/sl/10 R_DOC_DIR\T1/zi4/m/sl/10 /html/packages.html\T1 /ptm/m/n/10 ', which can be re-made by [][][]\T1/zi4/m/sl/10 make.packages.html [][][]()[]\T1/ptm/m/n/10 . [2219] Underfull \hbox (badness 2150) in paragraph at lines 6933--6936 []\T1/ptm/m/n/10 a char-ac-ter vec-tor list-ing the types of doc-u-men-ta-tion to search. See [2220] [2221] Underfull \hbox (badness 3118) in paragraph at lines 7072--7074 []\T1/ptm/m/n/10 For de-tails of the lock-ing which is done, see the sec-tion ` Lock-ing' in the help for [2222] [2223] Underfull \hbox (badness 1325) in paragraph at lines 7250--7254 []\T1/ptm/m/n/10 a ma-trix as re-turned by [][][]\T1/zi4/m/sl/10 available.pack ages[][][] []\T1/ptm/m/n/10 list-ing pack-ages avail-able [2224] Underfull \hbox (badness 1424) in paragraph at lines 7343--7346 []\T1/ptm/m/n/10 logical: if true, re-duce the amount of out-put. This is \T1/p tm/m/it/10 not \T1/ptm/m/n/10 passed to [2225] Underfull \hbox (badness 3219) in paragraph at lines 7424--7431 []\T1/ptm/m/n/10 An al-ter-na-tive (and the cur-rent de-fault) is []\T1/zi4/m/s l/10 "both" []\T1/ptm/m/n/10 which means `use bi-nary if avail- Underfull \hbox (badness 5175) in paragraph at lines 7424--7431 \T1/ptm/m/n/10 able and cur-rent, oth-er-wise try source'. The ac-tion if there are source pack-ages Underfull \hbox (badness 1342) in paragraph at lines 7424--7431 \T1/ptm/m/n/10 which are pre-ferred but may con-tain code which needs to be com -piled is con-trolled by Underfull \hbox (badness 1596) in paragraph at lines 7424--7431 [][][]\T1/zi4/m/sl/10 getOption[][][]("install.packages.compile.from.source")[] \T1/ptm/m/n/10 . []\T1/zi4/m/sl/10 type = "both" []\T1/ptm/m/n/10 will be silen tly [2226] Underfull \hbox (badness 2932) in paragraph at lines 7432--7435 []\T1/ptm/m/n/10 Using pack-ages with []\T1/zi4/m/sl/10 type = "source" []\T1/p tm/m/n/10 al-ways works pro-vided the pack-age con-tains no [2227] Underfull \hbox (badness 1024) in paragraph at lines 7561--7564 []\T1/ptm/m/n/10 For other repos-i-to-ries, us-ing []\T1/zi4/m/sl/10 available. packages(filters = "OS_type")[\T1/ptm/m/sl/10 pkgname\T1/zi4/m/sl/10 , ] []\T1/ ptm/m/n/10 will [2228] Underfull \hbox (badness 10000) in paragraph at lines 7594--7599 [][][]\T1/zi4/m/sl/10 update.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/s l/10 available.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 download. packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 installed.packages[][][] []\T1/ptm/m/n/10 , Underfull \hbox (badness 5133) in paragraph at lines 7660--7664 []\T1/ptm/m/n/10 a char-ac-ter vec-tor giv-ing the fields to ex-tract from each pack-age's [2229] [2230] [2231] [2232] [2233] [2234] [2235] [2236] [2237] [2238] [2239] [2240] Underfull \hbox (badness 10000) in paragraph at lines 8327--8329 []\T1/ptm/m/n/10 typically the re-sult of []\T1/zi4/m/sl/10 methods(..)[]\T1/pt m/m/n/10 , an \T1/phv/m/n/10 R \T1/ptm/m/n/10 ob-ject of S3 class [2241] [2242] [2243] [2244] [2245] [2246] [2247] [2248] [2249] [2250] [2251] [2252] Underfull \hbox (badness 2310) in paragraph at lines 9114--9119 []\T1/ptm/m/n/10 If a `\T1/zi4/m/sl/10 DESCRIPTION\T1/ptm/m/n/10 ' file for the given pack-age is found and can suc-cess-fully be read, [2253] [2254] [2255] [2256] [2257] [2258] [2259] [2260] [2261] Underfull \hbox (badness 1248) in paragraph at lines 9691--9695 []\T1/zi4/m/sl/10 R CMD build []\T1/ptm/m/n/10 builds \T1/phv/m/n/10 R \T1/ptm/ m/n/10 source tar-balls. The name(s) of the pack-ages are taken from the [2262] [2263] Underfull \hbox (badness 1789) in paragraph at lines 9769--9771 []\T1/ptm/m/n/10 See `Writ-ing R Ex-ten-sions' and the `R for Win-dows FAQ' for more dis-cus-sion of the [2264] [2265] [2266] [2267] Underfull \hbox (badness 2600) in paragraph at lines 9993--9996 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the name of the help topic; de-faults to [2268] [2269] [2270] [2271] [2272] [2273] [2274] [2275] [2276] Underfull \hbox (badness 1097) in paragraph at lines 10630--10633 []\T1/ptm/m/n/10 The name []\T1/zi4/m/sl/10 "clipboard" []\T1/ptm/m/n/10 may al so be used on Win-dows, in which case [2277] [2278] Underfull \hbox (badness 3000) in paragraph at lines 10766--10771 [][][]\T1/zi4/m/sl/10 scan[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 type.c onvert[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 read.fwf[][][] []\T1/ptm/m /n/10 for read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/pt m/m/n/10 idth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][][]\T1/zi4/m/ sl/10 read.table[][][][]\T1/ptm/m/n/10 ; [2279] [2280] [2281] [2282] [2283] [2284] [2285] [2286] [2287] Underfull \hbox (badness 2134) in paragraph at lines 11361--11366 [][][]\T1/zi4/m/sl/10 scan[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 type.c onvert[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 read.fwf[][][] []\T1/ptm/m /n/10 for read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/pt m/m/n/10 idth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][][]\T1/zi4/m/ sl/10 write.table[][][][]\T1/ptm/m/n/10 ; [2288] Underfull \hbox (badness 10000) in paragraph at lines 11417--11422 []\T1/ptm/m/n/10 The `hive' con-tain-ing the key. The ab-bre-vi-a-tions are for Underfull \hbox (badness 10000) in paragraph at lines 11417--11422 []\T1/zi4/m/sl/10 HKEY_LOCAL_MACHINE[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 HKEY_C LASSES_ROOT[]\T1/ptm/m/n/10 . []\T1/zi4/m/sl/10 HKEY_CURRENT_USER[]\T1/ptm/m/n/ 10 , [2289] [2290] [2291] [2292] [2293] [2294] [2295] [2296] Underfull \hbox (badness 1824) in paragraph at lines 11915--11919 \T1/zi4/m/sl/10 / / en . wikipedia . org / w / index . php ? title = Roman _ nu merals & oldid = 1188781837$[][]\T1/ptm/m/n/10 . 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(rerunfilecheck) Rerun to get outlines right (rerunfilecheck) or use package `bookmark'. ) (see the transcript file for additional information) pdfTeX warning (dest): name{Rfn.write.matrix} has been referenced but does not exist, replaced by a fixed one pdfTeX warning (dest): name{Rfn.lmList} has been referenced but does not exist, replaced by a fixed one pdfTeX warning (dest): name{Rfn.knitr} has been referenced but does not exist, replaced by a fixed one pdfTeX warning (dest): name{Rfn.de.restore} has been referenced but does not ex ist, replaced by a fixed one pdfTeX warning (dest): name{Rfn.de.setup} has been referenced but does not exis t, replaced by a fixed one pdfTeX warning (dest): name{Rfn.de.ncols} has been referenced but does not exis t, replaced by a fixed one pdfTeX warning (dest): name{Rfn.mathjaxr} has been referenced but does not exis t, replaced by a fixed one pdfTeX warning (dest): name{Rfn.dgTMatrix} has been referenced but does not exi st, replaced by a fixed one 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[1] [2] Underfull \hbox (badness 6252) in paragraph at lines 149--157 []\T1/ptm/m/n/10 a small pos-i-tive floating-point num-ber []\T1/zi4/m/n/10 x [ ]\T1/ptm/m/n/10 such that []\T1/zi4/m/n/10 1 - x != 1[]\T1/ptm/m/n/10 . It Underfull \hbox (badness 10000) in paragraph at lines 149--157 \T1/ptm/m/n/10 equals []\T1/zi4/m/n/10 double.base ^ double.neg.ulp.digits []\T 1/ptm/m/n/10 if []\T1/zi4/m/n/10 double.base Underfull \hbox (badness 10000) in paragraph at lines 149--157 []\T1/ptm/m/n/10 is 2 or []\T1/zi4/m/n/10 double.rounding []\T1/ptm/m/n/10 is 0 ; oth-er-wise, it is []\T1/zi4/m/n/10 (double.base Underfull \hbox (badness 10000) in paragraph at lines 149--157 \T1/zi4/m/n/10 ^ double.neg.ulp.digits) / 2[]\T1/ptm/m/n/10 . Nor-mally []\T1/z i4/m/n/10 1.110223e-16[]\T1/ptm/m/n/10 . As Underfull \hbox (badness 4995) in paragraph at lines 149--157 []\T1/zi4/m/n/10 double.neg.ulp.digits []\T1/ptm/m/n/10 is bounded be-low by [] \T1/zi4/m/n/10 -(double.digits + 3)[]\T1/ptm/m/n/10 , [3] [4] [5] Underfull \hbox (badness 1178) in paragraph at lines 337--340 []\T1/ptm/m/n/10 character string, the pre-ferred set-ting for [][][]\T1/zi4/m/ n/10 options[][][]("pkgType")[]\T1/ptm/m/n/10 . Val-ues [6] [7] [8] [9] Underfull \hbox (badness 2556) in paragraph at lines 572--578 []\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `[] \T1/zi4/m/n/10 insertions[]\T1/ptm/m/n/10 ', [10] [11] [12] (/usr/share/texlive/texmf-dist/tex/latex/inconsolata/ts1zi4.fd) [13{/usr/share/texlive/texmf-dist/fonts/enc/dvips/inconsolata/i4-ts1.enc}] [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] [24] [25] [26] [27] [28] [29] [30] Underfull \vbox (badness 3803) has occurred while \output is active [31] [32] [33] [34] [35] [36] Overfull \hbox (26.27782pt too wide) in paragraph at lines 2285--2285 []\T1/zi4/m/n/9 ## http://www.mathworks.de/de/help/matlab/matlab_prog/represen t-date-and-times-in-MATLAB.html)[] [37] [38] [39] [40] [41] [42] Overfull \hbox (20.69484pt too wide) in paragraph at lines 2639--2639 []\T1/zi4/m/n/9 if(file.exists(tab)) { # typically on Windows; on Linux when \TS1/cmtt/m/n/9 `\T1/zi4/m/n/9 configure --with-internal-tzcode\TS1/cmtt/m/n/9 `[] [43] [44] [45] [46] [47] Underfull \hbox (badness 1721) in paragraph at lines 2957--2961 [][][]\T1/zi4/m/n/10 assign[][][] []\T1/ptm/m/n/10 (and its in-verse [][][]\T1/ zi4/m/n/10 get[][][][]\T1/ptm/m/n/10 ), for ``sub-assign-ment'' such as []\T1/z i4/m/n/10 x[i] <- v[]\T1/ptm/m/n/10 , see [][][]\T1/zi4/m/n/10 [<-[][][][]\T1/p tm/m/n/10 ; fur-ther, [48] [49] [50] [51] [52] [53] [54] Underfull \hbox (badness 2538) in paragraph at lines 3443--3446 []\T1/zi4/m/n/10 unCfillPOSIXlt(x) []\T1/ptm/m/n/10 is a fast [][]prim-i-tive[] [][] ver-sion of []\T1/zi4/m/n/10 balancePOSIXlt(x, fill.only=TRUE, [55] [56] [57] [58] [59] Underfull \vbox (badness 3803) has occurred while \output is active [60] [61] [62] [63] [64] [65] [66] [67] Underfull \hbox (badness 10000) in paragraph at lines 4239--4241 []\T1/ptm/m/n/10 The num-ber of lines printed for the de-parsed call can be lim -ited by set-ting [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] Underfull \hbox (badness 2521) in paragraph at lines 5588--5590 []\T1/ptm/m/n/10 a char-ac-ter vec-tor, or an ob-ject that can be co-erced to c har-ac-ter by [89] [90] [91] [92] [93] [94] [95] [96] [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] [108] Overfull \hbox (5.27168pt too wide) in paragraph at lines 6871--6871 []\T1/zi4/m/n/9 stopifnot(is.na(NpNA), is.na(NA_complex_), is.na(Re(NA_complex _)), is.na(Im(NA_complex_)))[] [109] [110] [111] [112] [113] [114] [115] [116] Underfull \hbox (badness 2253) in paragraph at lines 7482--7487 []\T1/zi4/m/n/10 file[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 pipe[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 fifo[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 url[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 gzfile[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 bzfile[]\T1/ptm/m/n /10 , []\T1/zi4/m/n/10 xzfile[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 zstdfile[]\T1/ ptm/m/n/10 , []\T1/zi4/m/n/10 unz[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 socketConn ection[]\T1/ptm/m/n/10 , Underfull \hbox (badness 2846) in paragraph at lines 7482--7487 []\T1/zi4/m/n/10 socketAccept []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 serverSocke t []\T1/ptm/m/n/10 re-turn a con-nec-tion ob-ject which in-her-its from class [117] [118] [119] [120] [121] Underfull \hbox (badness 2261) in paragraph at lines 7798--7803 \T1/zi4/m/n/10 / / github . com / astrand / xclip$[][]\T1/ptm/m/n/10 ) or []\T1 /zi4/m/n/10 xsel []\T1/ptm/m/n/10 ([][]$\T1/zi4/m/n/10 https : / / www . vergen et . net / ~conrad / software / [122] [123] Underfull \vbox (badness 10000) has occurred while \output is active [124] [125] [126] [127] [128] [129] [130] [131] [132] Underfull \hbox (badness 2096) in paragraph at lines 8531--8535 \T1/zi4/m/n/10 status _ codes$[][] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / List _ of _ FTP _ server _ return _ codes$ [][]\T1/ptm/m/n/10 . [133] [134] Underfull \hbox (badness 2351) in paragraph at lines 8646--8649 [][][]\T1/zi4/m/n/10 split[][][] []\T1/ptm/m/n/10 for split-ting a vari-able ac -cord-ing to a group fac-tor; [][][]\T1/zi4/m/n/10 factor[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 tabulate[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 t able[][][][]\T1/ptm/m/n/10 , [135] [136] [137] [138] [139] Underfull \hbox (badness 4479) in paragraph at lines 8963--8974 [][][]\T1/zi4/m/n/10 I[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 plot.data.f rame[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 print.data.frame[][][][]\T1/p tm/m/n/10 , [][][]\T1/zi4/m/n/10 row.names[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/n/10 names[][][] []\T1/ptm/m/n/10 (for the col-umn names), [140] [141] [142] [143] [144] [145] Underfull \hbox (badness 1629) in paragraph at lines 9394--9406 []\T1/ptm/m/n/10 A few times have spe-cific is-sues. First, the leap sec-onds a re ig-nored, and real times Underfull \hbox (badness 2875) in paragraph at lines 9394--9406 []\T1/zi4/m/n/10 NA[]\T1/ptm/m/n/10 , and hence []\T1/zi4/m/n/10 as.POSIXct("19 69-12-31 23:59:59", tz = "UTC") []\T1/ptm/m/n/10 will give []\T1/zi4/m/n/10 "19 69-12-31 [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157] [158] Underfull \hbox (badness 1178) in paragraph at lines 10265--10269 []\T1/ptm/m/n/10 If true, [][][]\T1/zi4/m/n/10 list[][][][]\T1/ptm/m/n/10 s and atomic vec-tors with non-[][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 names (see [][][]\T1/zi4/m/n/10 names[][][][]\T1/ptm/m/n/10 ) are de- [159] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188] [189] [190] [191] [192] [193] [194] [195] Underfull \hbox (badness 2744) in paragraph at lines 12613--12615 []\T1/ptm/m/n/10 Changing the cur-rent en-cod-ing from a run-ning R ses-sion ma y lead to con-fu-sion (see [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] [223] [224] [225] [226] [227] Underfull \hbox (badness 2253) in paragraph at lines 14821--14823 []\T1/ptm/m/n/10 character vec-tors con-tain-ing file paths. Tilde-expansion is done: see [228] Underfull \hbox (badness 1490) in paragraph at lines 14856--14859 []\T1/ptm/m/n/10 Junction points and sym-bolic links are fol-lowed, so in-for-m a-tion is given about the [229] Underfull \hbox (badness 1565) in paragraph at lines 14942--14946 [][][]\T1/zi4/m/n/10 Sys.readlink[][][] []\T1/ptm/m/n/10 to find out about sym- bolic links, [][][]\T1/zi4/m/n/10 files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m /n/10 file.access[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 list.files[][][] []\T1/ptm/m/n/10 , and [230] Underfull \hbox (badness 4927) in paragraph at lines 14993--14995 []\T1/ptm/m/n/10 It can also be used for en-vi-ron-ment paths such as []\T1/zi4 /m/n/10 PATH []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 R_LIBS []\T1/ptm/m/n/10 with []\T1/zi4/m/n/10 fsep = [231] [232] Underfull \hbox (badness 1466) in paragraph at lines 15144--15147 []\T1/ptm/m/n/10 character vec-tors, con-tain-ing file names or paths. For []\T 1/zi4/m/n/10 file.copy []\T1/ptm/m/n/10 and [233] [234] Underfull \hbox (badness 10000) in paragraph at lines 15275--15279 [][][]\T1/zi4/m/n/10 file.info[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 fil e.access[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.path[][][][]\T1/ptm/ m/n/10 , [][][]\T1/zi4/m/n/10 file.show[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m /n/10 list.files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 unlink[][][][]\T1 /ptm/m/n/10 , [][][]\T1/zi4/m/n/10 basename[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 15286--15289 [][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Hard _ link$[][ ] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wik i / [235] [236] [237] [238] [239] Underfull \hbox (badness 3965) in paragraph at lines 15590--15594 []\T1/ptm/m/n/10 This is the same com-pu-ta-tion as for the em-pir-i-cal dis-tr i-bu-tion func-tion, and in-deed, [240] [241] [242] [243] [244] [245] [246] [247] Underfull \hbox (badness 5260) in paragraph at lines 16099--16099 []\T1/zi4/m/n/10 big.mark[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 big.interval[]\T1/ ptm/m/n/10 , []\T1/zi4/m/n/10 small.mark[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 sma ll.interval[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 decimal.mark[]\T1/ptm/m/n/10 , [248] [249] [250] [251] Underfull \hbox (badness 4429) in paragraph at lines 16389--16392 []\T1/ptm/m/n/10 an atomic nu-mer-i-cal or char-ac-ter ob-ject, pos-si-bly [][] []\T1/zi4/m/n/10 complex[][][] []\T1/ptm/m/n/10 only for [252] [253] Underfull \hbox (badness 10000) in paragraph at lines 16496--16498 []\T1/ptm/m/n/10 This works via []\T1/zi4/m/n/10 prettyNum()[]\T1/ptm/m/n/10 , which calls []\T1/zi4/m/n/10 .format.zeros(*, [254] Underfull \hbox (badness 2035) in paragraph at lines 16569--16573 []\T1/ptm/m/n/10 The de-fault for []\T1/zi4/m/n/10 decimal.mark []\T1/ptm/m/n/1 0 in []\T1/zi4/m/n/10 formatC() []\T1/ptm/m/n/10 was changed in \T1/phv/m/n/10 R \T1/ptm/m/n/10 3.2.0: for use within [255] Underfull \vbox (badness 10000) has occurred while \output is active [256] [257] [258] [259] [260] [261] [262] [263] [264] Underfull \hbox (badness 2452) in paragraph at lines 17192--17196 []\T1/zi4/m/n/10 gctorture2 []\T1/ptm/m/n/10 can also be in-voked via en-vi-ron -ment vari-ables at the start of the \T1/phv/m/n/10 R \T1/ptm/m/n/10 ses- Underfull \hbox (badness 1147) in paragraph at lines 17192--17196 \T1/ptm/m/n/10 sion. []\T1/zi4/m/n/10 R_GCTORTURE []\T1/ptm/m/n/10 cor-re-spond s to the []\T1/zi4/m/n/10 step []\T1/ptm/m/n/10 ar-gu-ment, []\T1/zi4/m/n/10 R_ GCTORTURE_WAIT []\T1/ptm/m/n/10 to []\T1/zi4/m/n/10 wait[]\T1/ptm/m/n/10 , and [265] [266] [267] Underfull \hbox (badness 1092) in paragraph at lines 17384--17389 [][][]\T1/zi4/m/n/10 library.dynam[][][][]\T1/ptm/m/n/10 , or can be found af-t er the DLL has been loaded us-ing [268] [269] [270] [271] Underfull \hbox (badness 6741) in paragraph at lines 17637--17641 \T1/ptm/m/n/10 Additionally, the list will have an ad-di-tional class, be-ing [ ]\T1/zi4/m/n/10 CRoutine[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 CallRoutine[]\T1/pt m/m/n/10 , [272] [273] [274] [275] [276] [277] [278] [279] [280] [281] [282] [283] Underfull \vbox (badness 10000) has occurred while \output is active [284] [285] [286] [287] [288] [289] [290] [291] [292] [293] Underfull \hbox (badness 1769) in paragraph at lines 19142--19145 []\T1/ptm/m/n/10 a char-ac-ter vec-tor, or an ob-ject to be con-verted to a cha r-ac-ter vec-tor [294] [295] [296] [297] [298] Underfull \hbox (badness 10000) in paragraph at lines 19451--19453 []\T1/ptm/m/n/10 the `root' col-la-tion: see [][]$\T1/zi4/m/n/10 https : / / ww w . unicode . org / reports / tr35 / Underfull \hbox (badness 2088) in paragraph at lines 19457--19466 []\T1/ptm/m/n/10 For the spec-i-fi-ca-tions of `real' ICU lo-cales, see [][]$\T 1/zi4/m/n/10 https : / / unicode-[]org . github . io / icu / [299] [300] [301] [302] [303] [304] [305] [306] [307] [308] Underfull \hbox (badness 1442) in paragraph at lines 20065--20067 []\T1/ptm/m/n/10 the choice of de-fault graph-ics de-vice launched when needed and by [][][]\T1/zi4/m/n/10 dev.new[][][][]\T1/ptm/m/n/10 : see [309] Underfull \hbox (badness 2452) in paragraph at lines 20161--20187 [][][]\T1/zi4/m/n/10 as.character[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.complex[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.double[][][][]\T1/pt m/m/n/10 , [][][]\T1/zi4/m/n/10 as.integer[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/n/10 as.logical[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.raw[][][][] \T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.vector[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 5726) in paragraph at lines 20161--20187 [][][]\T1/zi4/m/n/10 as.call[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.en vironment[][][] [][]is.array[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.ma trix[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.na[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 anyNA[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.nan [][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.finite[][][] [310] [311] [312] [313] [314] [315] Underfull \hbox (badness 1248) in paragraph at lines 20559--20562 []\T1/zi4/m/n/10 is.atomic []\T1/ptm/m/n/10 is true for the [][]atomic[][][] ty pes ([]\T1/zi4/m/n/10 "logical"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "integer"[]\ T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "numeric"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 " complex"[]\T1/ptm/m/n/10 , [316] [317] [318] [319] [320] Underfull \hbox (badness 4739) in paragraph at lines 20828--20830 []\T1/ptm/m/n/10 numeric scalar >= 0. Smaller dif-fer-ences are not con-sid-ere d, see [321] [322] [323] [324] [325] Underfull \vbox (badness 3803) has occurred while \output is active [326] [327] [328] [329] [330] [331] [332] [333] [334] [335] [336] [337] [338] [339] Underfull \hbox (badness 2469) in paragraph at lines 22003--22008 []\T1/ptm/m/n/10 In late 2017 a []\T1/zi4/m/n/10 libcurl []\T1/ptm/m/n/10 in-st al-la-tion was seen di-vided into two li-braries, []\T1/zi4/m/n/10 libcurl []\T 1/ptm/m/n/10 and [340] [341] Underfull \hbox (badness 1675) in paragraph at lines 22090--22099 []\T1/ptm/m/n/10 At startup, the li-brary search path is ini-tial-ized from the en-vi-ron-ment vari-ables []\T1/zi4/m/n/10 R_LIBS[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3189) in paragraph at lines 22100--22113 []\T1/ptm/m/n/10 First, []\T1/zi4/m/n/10 .Library.site []\T1/ptm/m/n/10 is ini- tial-ized from []\T1/zi4/m/n/10 R_LIBS_SITE[]\T1/ptm/m/n/10 . If this is un-set or empty, the Underfull \hbox (badness 10000) in paragraph at lines 22148--22151 []\T1/zi4/m/n/10 LOCALAPPDATA []\T1/ptm/m/n/10 (usu-ally []\T1/zi4/m/n/10 C:\Us ers\username\AppData\Local[]\T1/ptm/m/n/10 ) on Win-dows is a hid- Underfull \hbox (badness 4752) in paragraph at lines 22148--22151 \T1/ptm/m/n/10 den di-rec-tory and may not be viewed by some soft-ware. It may be opened by [342] [343] Underfull \hbox (badness 1014) in paragraph at lines 22282--22287 []\T1/ptm/m/n/10 Normally []\T1/zi4/m/n/10 library []\T1/ptm/m/n/10 re-turns (i n-vis-i-bly) the list of at-tached pack-ages, but []\T1/zi4/m/n/10 TRUE []\T1/p tm/m/n/10 or []\T1/zi4/m/n/10 FALSE []\T1/ptm/m/n/10 if [344] [345] [346] [347] [348] [349] [350] [351] [352] [353] [354] [355] [356] Underfull \hbox (badness 1264) in paragraph at lines 23129--23137 []\T1/ptm/m/n/10 character string. The fol-low-ing cat-e-gories should al-ways be sup-ported: [357] Underfull \hbox (badness 4441) in paragraph at lines 23164--23167 []\T1/ptm/m/n/10 Note that set-ting cat-e-gory []\T1/zi4/m/n/10 "LC_ALL" []\T1/ ptm/m/n/10 sets only cat-e-gories []\T1/zi4/m/n/10 "LC_COLLATE"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "LC_CTYPE"[]\T1/ptm/m/n/10 , [358] [359] [360] [361] [362] [363] [364] [365] [366] [367] [368] [369] Underfull \hbox (badness 5231) in paragraph at lines 23984--23986 []\T1/ptm/m/n/10 The al-go-rithm used by []\T1/zi4/m/n/10 make.unique []\T1/ptm /m/n/10 has the prop-erty that []\T1/zi4/m/n/10 make.unique(c(A, B)) == [370] [371] [372] [373] [374] [375] [376] [377] [378] [379] [380] [381] [382] [383] [384] [385] [386] [387] Underfull \hbox (badness 6380) in paragraph at lines 25098--25104 [][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Data _ compress ion$[][] \T1/ptm/m/n/10 for back-ground on data com-pres- Underfull \hbox (badness 1472) in paragraph at lines 25098--25104 [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Bzip2$[][]\T1/ptm /m/n/10 , and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / XZ _ Utils$[][] [388] [389] [390] [391] [392] [393] [394] [395] Underfull \hbox (badness 2790) in paragraph at lines 25610--25613 []\T1/zi4/m/n/10 packageStartupMessage []\T1/ptm/m/n/10 is a vari-ant whose mes -sages can be sup-pressed sep-a-rately by Underfull \hbox (badness 1571) in paragraph at lines 25610--25613 []\T1/zi4/m/n/10 suppressPackageStartupMessages[]\T1/ptm/m/n/10 . (They are sti ll mes-sages, so can be sup-pressed by [396] [397] [398] [399] [400] Underfull \hbox (badness 1194) in paragraph at lines 25938--25941 []\T1/ptm/m/n/10 The de-fault method for []\T1/zi4/m/n/10 anyNA []\T1/ptm/m/n/1 0 han-dles atomic vec-tors with-out a class and []\T1/zi4/m/n/10 NULL[]\T1/ptm/ m/n/10 . It calls [401] [402] [403] Underfull \hbox (badness 2368) in paragraph at lines 26145--26151 []\T1/ptm/m/n/10 For an [][][]\T1/zi4/m/n/10 environment[][][] env[]\T1/ptm/m/n /10 , []\T1/zi4/m/n/10 names(env) []\T1/ptm/m/n/10 gives the names of the cor-r e-spond-ing list, i.e., [404] [405] [406] [407] [408] [409] Underfull \hbox (badness 10000) in paragraph at lines 26535--26538 []\T1/ptm/m/n/10 optional [][][]\T1/zi4/m/n/10 logical[][][] []\T1/ptm/m/n/10 e ven-tu-ally to be passed to []\T1/zi4/m/n/10 print()[]\T1/ptm/m/n/10 , used by [410] [411] [412] [413] [414] [415] [416] [417] [418] [419] Underfull \hbox (badness 10000) in paragraph at lines 27163--27165 []\T1/zi4/m/n/10 isNamespaceLoaded(pkg) []\T1/ptm/m/n/10 is equiv-a-lent to but more ef-fi-cient than []\T1/zi4/m/n/10 pkg %in% [420] [421] [422] [423] [424] [425] [426] Underfull \hbox (badness 2443) in paragraph at lines 27654--27662 \T1/ptm/m/n/10 suit-able char-ac-ter vec-tors as above, or nu-meric ver-sion ob -jects. For [427] [428] [429] [430] [431] [432] [433] Underfull \hbox (badness 1881) in paragraph at lines 28084--28087 []\T1/ptm/m/n/10 integer value con-trol-ling the print-ing of lan-guage con-str ucts which are Underfull \hbox (badness 6220) in paragraph at lines 28109--28111 []\T1/ptm/m/n/10 Extra command-line ar-gu-ment(s) for non-default meth-ods: see [434] [435] Underfull \hbox (badness 2142) in paragraph at lines 28250--28254 []\T1/ptm/m/n/10 the de-fault pa-per for-mat used by [][][]\T1/zi4/m/n/10 posts cript[][][][]\T1/ptm/m/n/10 ; set by en-vi-ron-ment vari-able Underfull \hbox (badness 1968) in paragraph at lines 28307--28312 []\T1/ptm/m/n/10 the com-mand used by [][][]\T1/zi4/m/n/10 postscript[][][] []\ T1/ptm/m/n/10 for print-ing; set by en-vi-ron-ment vari-able [436] [437] [438] [439] Underfull \hbox (badness 10000) in paragraph at lines 28606--28612 []\T1/ptm/m/n/10 The URL of a Bio-con-duc-tor mir-ror for use by [][][]\T1/zi4/ m/n/10 setRepositories[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 28606--28612 \T1/ptm/m/n/10 e.g. the de-fault `[]\T1/zi4/m/n/10 "https://bioconductor.org"[] \T1/ptm/m/n/10 ' or the Eu-ro-pean mir-ror Underfull \hbox (badness 10000) in paragraph at lines 28606--28612 \T1/ptm/m/n/10 `[]\T1/zi4/m/n/10 "https://bioconductor.statistik.tu-dortmund.de "[]\T1/ptm/m/n/10 '. Can be set by Underfull \hbox (badness 5878) in paragraph at lines 28619--28622 []\T1/ptm/m/n/10 default Cc: ad-dress used by [][][]\T1/zi4/m/n/10 create.post[ ][][] []\T1/ptm/m/n/10 (and hence [][][]\T1/zi4/m/n/10 bug.report[][][] []\T1/p tm/m/n/10 and Underfull \hbox (badness 2689) in paragraph at lines 28645--28647 []\T1/ptm/m/n/10 optional in-te-ger vec-tor for set-ting ports of the in-ter-na l HTTP server, see [440] Underfull \hbox (badness 10000) in paragraph at lines 28691--28696 []\T1/ptm/m/n/10 Used by [][][]\T1/zi4/m/n/10 install.packages[][][] []\T1/ptm/ m/n/10 (and in-di-rectly Underfull \hbox (badness 2529) in paragraph at lines 28697--28708 \T1/ptm/m/n/10 in-di-rectly [][][]\T1/zi4/m/n/10 update.packages[][][][]\T1/ptm /m/n/10 ) on plat-forms which sup-port bi-nary pack-ages. Pos-si- Underfull \hbox (badness 2512) in paragraph at lines 28697--28708 \T1/ptm/m/n/10 ble val-ues are []\T1/zi4/m/n/10 "never"[]\T1/ptm/m/n/10 , []\T1 /zi4/m/n/10 "interactive" []\T1/ptm/m/n/10 (which means ask in in-ter-ac-tive u se and Underfull \hbox (badness 7203) in paragraph at lines 28709--28712 []\T1/ptm/m/n/10 default email-ing method used by [][][]\T1/zi4/m/n/10 create.p ost[][][] []\T1/ptm/m/n/10 and hence [][][]\T1/zi4/m/n/10 bug.report[][][] []\T 1/ptm/m/n/10 and [441] [442] [443] [444] [445] Underfull \vbox (badness 3803) has occurred while \output is active [446] Underfull \hbox (badness 10000) in paragraph at lines 29124--29128 \T1/ptm/m/n/10 el-e-ment []\T1/zi4/m/n/10 A[c(arrayindex.x, arrayindex.y)] = FU N(X[arrayindex.x], Y[arrayindex.y], [447] [448] Underfull \hbox (badness 10000) in paragraph at lines 29271--29274 []\T1/zi4/m/n/10 str2expression(s) []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 str2la ng(s) []\T1/ptm/m/n/10 re-turn spe-cial ver-sions of []\T1/zi4/m/n/10 parse(tex t=s, [449] Underfull \hbox (badness 7925) in paragraph at lines 29352--29356 []\T1/ptm/m/n/10 for a [][][]\T1/zi4/m/n/10 character[][][] []\T1/ptm/m/n/10 ve c-tor []\T1/zi4/m/n/10 s[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 str2expression(s) [ ]\T1/ptm/m/n/10 cor-re-sponds to Underfull \hbox (badness 1253) in paragraph at lines 29352--29356 []\T1/zi4/m/n/10 parse(text = s, keep.source=FALSE)[]\T1/ptm/m/n/10 , which is al-ways of type ([][][]\T1/zi4/m/n/10 typeof[][][][]\T1/ptm/m/n/10 ) and [][][] \T1/zi4/m/n/10 class[][][] Underfull \hbox (badness 2521) in paragraph at lines 29357--29366 []\T1/ptm/m/n/10 for a [][][]\T1/zi4/m/n/10 character[][][] []\T1/ptm/m/n/10 st ring []\T1/zi4/m/n/10 s[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 str2lang(s) []\T1/pt m/m/n/10 cor-re-sponds to []\T1/zi4/m/n/10 parse(text = s, [450] [451] [452] [453] [454] [455] [456] [457] [458] [459] [460] [461] [462] [463] [464] [465] [466] Underfull \hbox (badness 2726) in paragraph at lines 30377--30380 []\T1/ptm/m/n/10 character string (or []\T1/zi4/m/n/10 NULL[]\T1/ptm/m/n/10 ) i n-di-cat-ing [][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 val-ues in printed out-put, see [467] [468] [469] [470] [471] [472] [473] [474] [475] [476] [477] [478] [479] [480] [481] [482] [483] [484] [485] Underfull \vbox (badness 3803) has occurred while \output is active [486] [487] [488] [489] [490] [491] [492] Underfull \hbox (badness 1248) in paragraph at lines 32070--32077 \T1/ptm/m/n/10 uni-form pseudo-random num-ber gen-er-a-tor, \T1/ptm/m/it/10 ACM Trans-ac-tions on Mod-el-ing and Com-puter Underfull \hbox (badness 10000) in paragraph at lines 32070--32077 \T1/ptm/m/n/10 Now see [][]$\T1/zi4/m/n/10 https : / / www . math . sci . hiros hima-[]u . ac . jp / ~m-[]mat / MT / VERSIONS / C-[]LANG / [493] [494] Underfull \hbox (badness 1533) in paragraph at lines 32188--32191 []\T1/ptm/m/n/10 As with all com-piled code, mis-specifying these func-tions ca n crash \T1/phv/m/n/10 R\T1/ptm/m/n/10 . Do in-clude the [495] [496] [497] Underfull \hbox (badness 1163) in paragraph at lines 32359--32370 []\T1/ptm/m/n/10 If all com-po-nents are dif-fer-ent (and no []\T1/zi4/m/n/10 N A[]\T1/ptm/m/n/10 s), the ranks are well de-fined, with val-ues in [498] [499] [500] [501] [502] [503] [504] [505] [506] Underfull \hbox (badness 6300) in paragraph at lines 32907--32909 []\T1/ptm/m/n/10 The sec-tion `Pro-cess-ing doc-u-men-ta-tion files' in the `Wr it-ing R Ex-ten-sions' man-ual: [507] [508] [509] [510] [511] [512] [513] [514] [515] [516] [517] [518] [519] [520] [521] [522] [523] Underfull \hbox (badness 10000) in paragraph at lines 34036--34040 []\T1/zi4/m/n/10 regexpr []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 gregexpr []\T1/p tm/m/n/10 sup-port `named cap-ture'. If groups are named, e.g., Underfull \hbox (badness 1221) in paragraph at lines 34036--34040 []\T1/zi4/m/n/10 "(?[A-Z][a-z]+)" []\T1/ptm/m/n/10 then the po-si-tions of the matches are also re-turned by name. Underfull \hbox (badness 3557) in paragraph at lines 34057--34059 []\T1/ptm/m/n/10 The POSIX 1003.2 stan-dard at [][]$\T1/zi4/m/n/10 https : / / pubs . opengroup . org / onlinepubs / 9699919799 / Underfull \hbox (badness 1122) in paragraph at lines 34060--34064 []\T1/ptm/m/n/10 The []\T1/zi4/m/n/10 pcre2pattern []\T1/ptm/m/n/10 or []\T1/zi 4/m/n/10 pcrepattern man []\T1/ptm/m/n/10 page (found as part of [][]$\T1/zi4/m /n/10 https : / / www . pcre . org / [524] [525] Underfull \vbox (badness 10000) has occurred while \output is active [526] [527] [528] [529] [530] [531] [532] [533] Underfull \hbox (badness 1655) in paragraph at lines 34662--34664 []\T1/ptm/m/n/10 a vec-tor (atomic, not a list) for []\T1/zi4/m/n/10 rle()[]\T1 /ptm/m/n/10 ; an ob-ject of class []\T1/zi4/m/n/10 "rle" []\T1/ptm/m/n/10 for [534] [535] [536] [537] [538] [539] [540] [541] [542] [543] [544] [545] [546] [547] [548] [549] [550] [551] [552] Underfull \hbox (badness 2261) in paragraph at lines 35869--35874 []\T1/ptm/m/n/10 If []\T1/zi4/m/n/10 strip.white []\T1/ptm/m/n/10 is of length 1, it ap-plies to all fields; oth-er-wise, if [553] [554] [555] [556] [557] [558] [559] [560] [561] [562] [563] [564] [565] [566] [567] [568] [569] Underfull \hbox (badness 3668) in paragraph at lines 36945--36949 []\T1/zi4/m/n/10 getAllConnections []\T1/ptm/m/n/10 re-turns a se-quence of in- te-ger con-nec-tion de-scrip-tors for use with [570] Underfull \hbox (badness 10000) in paragraph at lines 37036--37047 \T1/zi4/m/n/10 / / learn . microsoft . com / en-[]us / cpp / c-[]language / par sing-[]c-[]command-[]line-[]arguments ? [571] [572] [573] [574] [575] [576] [577] [578] [579] [580] [581] [582] [583] [584] [585] [586] [587] [588] [589] [590] Underfull \vbox (badness 3803) has occurred while \output is active [591] [592] [593] [594] [595] [596] Underfull \hbox (badness 10000) in paragraph at lines 38675--38677 [][][]$\T1/zi4/m/n/10 https : / / pubs . opengroup . org / onlinepubs / 9699919 799 / functions / snprintf . html$[][] \T1/ptm/m/n/10 for [597] [598] [599] [600] [601] [602] Underfull \hbox (badness 2913) in paragraph at lines 39093--39097 \T1/ptm/m/n/10 ber of nested \T1/phv/m/n/10 R \T1/ptm/m/n/10 ex-pres-sions cur- rently un-der eval-u-a-tion, ex-ceeds the limit set by [603] [604] [605] [606] Underfull \hbox (badness 1072) in paragraph at lines 39339--39343 []\T1/ptm/m/n/10 On front-ends which sup-port it, the com-mands his-tory is rea d from the file spec-i-fied by Underfull \hbox (badness 10000) in paragraph at lines 39344--39348 []\T1/ptm/m/n/10 The command-line op-tion `[]\T1/zi4/m/n/10 --vanilla[]\T1/ptm/ m/n/10 ' im-plies `[]\T1/zi4/m/n/10 --no-site-file[]\T1/ptm/m/n/10 ', `[]\T1/zi 4/m/n/10 --no-init-file[]\T1/ptm/m/n/10 ', Underfull \hbox (badness 10000) in paragraph at lines 39384--39390 []\T1/ptm/m/n/10 On sys-tems with sub-architectures (mainly Win-dows), the file s `\T1/zi4/m/n/10 Renviron.site\T1/ptm/m/n/10 ' Underfull \hbox (badness 10000) in paragraph at lines 39384--39390 \T1/ptm/m/n/10 and `\T1/zi4/m/n/10 Rprofile.site\T1/ptm/m/n/10 ' are looked for first in architecture-specific di-rec-to-ries, Underfull \hbox (badness 1320) in paragraph at lines 39384--39390 \T1/ptm/m/n/10 e.g. `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/i386/R environ.site\T1/ptm/m/n/10 '. And e.g. `\T1/zi4/m/n/10 .Renviron.i386\T1/ptm/m/ n/10 ' will be used in [607] Underfull \hbox (badness 3009) in paragraph at lines 39399--39406 []\T1/ptm/m/n/10 On Unix ver-sions of \T1/phv/m/n/10 R \T1/ptm/m/n/10 there is also a file `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/Renviron\T1/pt m/m/n/10 ' which is read Underfull \hbox (badness 1038) in paragraph at lines 39399--39406 \T1/ptm/m/n/10 very early in the start-up pro-cess-ing. It con-tains en-vi-ron- ment vari-ables set by \T1/phv/m/n/10 R \T1/ptm/m/n/10 in the Underfull \hbox (badness 2573) in paragraph at lines 39399--39406 \T1/ptm/m/n/10 con-fig-ure pro-cess. Val-ues in that file can be over-rid-den i n site or user en-vi-ron-ment Underfull \hbox (badness 1917) in paragraph at lines 39399--39406 \T1/ptm/m/n/10 files: do not change `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/ n/10 /etc/Renviron\T1/ptm/m/n/10 ' it-self. Note that this is dis-tinct from [608] [609] [610] Underfull \hbox (badness 2644) in paragraph at lines 39634--39638 []\T1/ptm/m/n/10 alternative to []\T1/zi4/m/n/10 exprs []\T1/ptm/m/n/10 or []\T 1/zi4/m/n/10 ...[]\T1/ptm/m/n/10 : an `expression-like' ob-ject, typ-i-cally an [611] [612] [613] [614] [615] [616] [617] [618] [619] Underfull \vbox (badness 10000) has occurred while \output is active [620] [621] [622] [623] [624] [625] [626] [627] [628] [629] [630] [631] [632] [633] [634] [635] Underfull \hbox (badness 4144) in paragraph at lines 41182--41190 []\T1/ptm/m/n/10 (for []\T1/zi4/m/n/10 summary.default[]\T1/ptm/m/n/10 ) or [][ ][]\T1/zi4/m/n/10 format[][][]() []\T1/ptm/m/n/10 (for []\T1/zi4/m/n/10 summary .data.frame[]\T1/ptm/m/n/10 ). In Underfull \hbox (badness 1158) in paragraph at lines 41192--41194 []\T1/ptm/m/n/10 integer code used in []\T1/zi4/m/n/10 quantile(*, type=quantil e.type) []\T1/ptm/m/n/10 for the de-fault [636] [637] [638] [639] [640] [641] [642] [643] [644] [645] Underfull \hbox (badness 1137) in paragraph at lines 41802--41808 []\T1/ptm/m/n/10 This ex-pands tilde (see [][]tilde ex-pan-sion[][][]) and wild -cards in file paths. For pre-cise de-tails Underfull \hbox (badness 4967) in paragraph at lines 41820--41825 []\T1/ptm/m/n/10 If a file-name starts with []\T1/zi4/m/n/10 . []\T1/ptm/m/n/10 this may need to be matched ex-plic-itly: for ex-am-ple [646] [647] Underfull \hbox (badness 1616) in paragraph at lines 41943--41948 []\T1/zi4/m/n/10 system("id") []\T1/ptm/m/n/10 is much more portable on Unix-al ikes, pro-vided only the POSIX op-tions [648] [649] [650] [651] Underfull \vbox (badness 3803) has occurred while \output is active [652] [653] [654] [655] [656] Underfull \hbox (badness 1472) in paragraph at lines 42490--42493 []\T1/ptm/m/n/10 logical. If []\T1/zi4/m/n/10 TRUE[]\T1/ptm/m/n/10 , func-tions keep their source in-clud-ing com-ments, see [657] [658] [659] LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/n' instead on input line 42702. [660] [661] [662] [663] [664] [665] [666] [667] [668] [669] [670] [671] Underfull \hbox (badness 10000) in paragraph at lines 43441--43445 []\T1/ptm/m/n/10 On 64-bit plat-forms []\T1/zi4/m/sl/10 bin []\T1/ptm/m/n/10 ca n have $\OT1/cmr/m/n/10 2[]$ \T1/ptm/m/n/10 or more el-e-ments (i.e., []\T1/zi4 /m/sl/10 length(bin) > [672] [673] [674] [675] [676] [677] [678] [679] [680] [681] [682] [683] [684] [685] [686] [687] [688] [689] Underfull \hbox (badness 10000) in paragraph at lines 44635--44638 [][][]$\T1/zi4/m/sl/10 https : / / en . wikipedia . org / wiki / Time _ zone$[] [] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/sl/10 https : / / data . iana . org / time -[]zones / [690] [691] [692] [693] [694] [695] Underfull \vbox (badness 10000) has occurred while \output is active [696] [697] [698] [699] [700] [701] [702] [703] Underfull \hbox (badness 1990) in paragraph at lines 45551--45559 []\T1/zi4/m/sl/10 try []\T1/ptm/m/n/10 eval-u-ates an ex-pres-sion and traps an y er-rors that oc-cur dur-ing the eval-u-a-tion. If Underfull \hbox (badness 4846) in paragraph at lines 45551--45559 \T1/ptm/m/n/10 an er-ror oc-curs then the er-ror mes-sage is printed to the [][ ][]\T1/zi4/m/sl/10 stderr[][][] []\T1/ptm/m/n/10 con-nec-tion un-less [704] [705] [706] [707] [708] [709] [710] [711] [712] [713] [714] [715] [716] [717] [718] [719] [720] [721] [722] [723] [724] [725] Underfull \hbox (badness 1014) in paragraph at lines 46992--46995 []\T1/ptm/m/n/10 logical, in-di-cat-ing if the warn-ing should be out-put im-me -di-ately, even if [726] [727] Underfull \hbox (badness 2401) in paragraph at lines 47125--47129 []\T1/ptm/m/n/10 See the de-scrip-tion of [][][]\T1/zi4/m/sl/10 options[][][](" warn") []\T1/ptm/m/n/10 for the cir-cum-stances un-der which there is a [728] [729] Underfull \hbox (badness 3492) in paragraph at lines 47251--47253 []\T1/zi4/m/sl/10 weekdays []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 months []\T1/ ptm/m/n/10 re-turn a char-ac-ter vec-tor of names in the lo-cale in use, i.e., [730] [731] Underfull \hbox (badness 2111) in paragraph at lines 47337--47342 \T1/ptm/m/n/10 If [][][]\T1/zi4/m/sl/10 names[][][](.dimnames) []\T1/ptm/m/n/10 is not empty, these are used as col-umn names. [732] [733] [734] Underfull \hbox (badness 4001) in paragraph at lines 47585--47587 []\T1/ptm/m/n/10 Thomas Lum-ley (2003) \T1/ptm/m/it/10 Stan-dard non-stan-dard eval-u-a-tion rules\T1/ptm/m/n/10 . [][]$\T1/zi4/m/sl/10 https : / / developer . [735] [736] [737] [738] [739] [740] [741] Underfull \hbox (badness 5417) in paragraph at lines 47987--47991 []\T1/zi4/m/sl/10 .packages() []\T1/ptm/m/n/10 re-turns the names of the cur-re ntly at-tached pack-ages \T1/ptm/m/it/10 in-vis-i-bly \T1/ptm/m/n/10 whereas [742] Underfull \hbox (badness 10000) in paragraph at lines 48048--48052 []\T1/zi4/m/sl/10 .standard_regexps []\T1/ptm/m/n/10 re-turns a list of `stan-d ard' reg-exps, in-clud-ing el-e-ments named [743]) (./compiler-pkg.tex [744] Chapter 2. [745] [746] [747] [748]) (./datasets-pkg.tex Chapter 3. [749] [750] [751] [752] [753] [754] [755] [756] [757] [758] [759] [760] [761] [762] [763] [764] [765] Underfull \hbox (badness 1097) in paragraph at lines 1034--1038 []\T1/ptm/m/n/10 MacDonell, W.R. (1902). On crim-i-nal an-thro-pom-e-try and th e iden-ti-fi-ca-tion of crim-i-nals. [766] [767] [768] [769] [770] [771] [772] [773] [774] [775] Overfull \hbox (5.23488pt too wide) in paragraph at lines 1643--1643 []\T1/zi4/m/n/9 matlines(gait[, -1, 1], gait[, -1, 2], type = "l", lty = 1, co l = adjustcolor("thistle", 1/3))[] [776] [777] [778] [779] [780] [781] [782] [783] [784] [785] [786] [787] [788] [789] [790] [791] [792] [793] [794] [795] [796] [797] [798] [799] [800] [801] [802] [803] [804] [805] [806] [807] [808] [809] [810] [811] Overfull \hbox (2.27475pt too wide) in paragraph at lines 3775--3775 []\T1/zi4/m/n/9 ## From https://pubs.usgs.gov/gip/Elevations-Distances/elvadis t.html#Geographic%20Centers[] [812] [813] [814] [815] [816] [817] [818] [819] [820] [821] [822] [823] [824] [825] [826] [827] [828] [829] [830] [831] [832] [833] [834] [835]) (./grDevices-pkg.tex [836] Chapter 4. [837] [838] [839] [840] [841] Underfull \hbox (badness 2221) in paragraph at lines 284--288 []\T1/ptm/m/n/10 numeric vec-tor of length 3, []\T1/zi4/m/sl/10 c(mi, ma, n.)[] \T1/ptm/m/n/10 , with iden-ti-cal mean-ing to Underfull \hbox (badness 10000) in paragraph at lines 299--304 []\T1/ptm/m/n/10 Apart from that, []\T1/zi4/m/sl/10 axisTicks() []\T1/ptm/m/n/1 0 just calls the C func-tion []\T1/zi4/m/sl/10 CreateAtVector() []\T1/ptm/m/n/1 0 in [842] [843] [844] [845] [846] [847] [848] [849] [850] [851] Underfull \hbox (badness 1424) in paragraph at lines 911--913 [][][]\T1/zi4/m/sl/10 NA[][][] []\T1/ptm/m/n/10 (as in-te-ger or char-ac-ter) a nd []\T1/zi4/m/sl/10 "NA" []\T1/ptm/m/n/10 mean trans-par-ent, which can also b e spec-i-fied as [852] Underfull \vbox (badness 10000) has occurred while \output is active [853] [854] [855] [856] Underfull \hbox (badness 5175) in paragraph at lines 1239--1241 []\T1/ptm/m/n/10 There is cur-rently no doc-u-men-ta-tion about the al-go-rithm . The source code is in [857] [858] Underfull \hbox (badness 2512) in paragraph at lines 1358--1360 []\T1/ptm/m/n/10 For the white points [][]$\T1/zi4/m/sl/10 https : / / web . ar chive . org / web / 20190613001950 / http : / / efg2 . com / [859] [860] [861] [862] [863] Underfull \hbox (badness 1490) in paragraph at lines 1658--1663 \T1/ptm/m/n/10 by [][][]\T1/zi4/m/sl/10 rasterImage[][][] []\T1/ptm/m/n/10 and [][][]\T1/zi4/m/sl/10 grid.raster[][][][]\T1/ptm/m/n/10 ? Pos-si-ble val-ues [] \T1/zi4/m/sl/10 "no"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "yes" []\T1/ptm/m/n/10 and Underfull \hbox (badness 3302) in paragraph at lines 1671--1675 []\T1/ptm/m/n/10 character: Does the de-vice sup-port pat-tern fills? One or mo re of [864] [865] [866] [867] [868] [869] Underfull \hbox (badness 1325) in paragraph at lines 2086--2096 []\T1/zi4/m/sl/10 "png48"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "pngmono"[]\T1/pt m/m/n/10 , []\T1/zi4/m/sl/10 "pnggray"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "png alpha"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "bmp16"[]\T1/ptm/m/n/10 , []\T1/zi4/ m/sl/10 "bmp16m" "bmp256"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "bmp32b"[]\T1/ptm /m/n/10 , [870] [871] Underfull \hbox (badness 10000) in paragraph at lines 2198--2200 []\T1/ptm/m/n/10 The de-fault value when a de-vice is opened is taken from the set-ting of [872] [873] [874] Underfull \hbox (badness 6758) in paragraph at lines 2386--2389 []\T1/ptm/m/n/10 Some other op-tions which can be use-ful (see your Ghostscript doc-u-men-ta-tion) are [875] [876] [877] [878] [879] [880] [881] [882] [883] [884] [885] [886] Underfull \hbox (badness 10000) in paragraph at lines 3143--3144 [887] [888] [889] [890] [891] [892] [893] [894] [895] [896] [897] [898] Underfull \vbox (badness 3803) has occurred while \output is active [899] [900] [901] [902] Underfull \vbox (badness 10000) has occurred while \output is active [903] [904] [905] [906] Underfull \hbox (badness 1418) in paragraph at lines 4429--4436 \T1/ptm/m/n/10 it is one of []\T1/zi4/m/sl/10 "AvantGarde"[]\T1/ptm/m/n/10 , [] \T1/zi4/m/sl/10 "Bookman"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Courier"[]\T1/pt m/m/n/10 , []\T1/zi4/m/sl/10 "Helvetica"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "H elvetica-Narrow"[]\T1/ptm/m/n/10 , [907] [908] [909] [910] Underfull \hbox (badness 1152) in paragraph at lines 4716--4723 []\T1/zi4/m/sl/10 encoding[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 bg[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/sl/10 fg[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 pointsize[]\T1/pt m/m/n/10 , []\T1/zi4/m/sl/10 pagecentre[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 col ormodel[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 useDingbats[]\T1/ptm/m/n/10 , [911] [912] [913] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.symbol}) has been already used, duplicate ignored \relax l.4896 \aliasA{symbol}{plotmath}{symbol} [914] [915] [916] [917] Underfull \vbox (badness 3803) has occurred while \output is active [918] [919] Underfull \hbox (badness 1584) in paragraph at lines 5289--5291 []\T1/ptm/m/n/10 For type []\T1/zi4/m/sl/10 "cairo"[]\T1/ptm/m/n/10 , the []\T1 /zi4/m/sl/10 symbolfamily []\T1/ptm/m/n/10 ar-gu-ment can be sup-plied. See Underfull \hbox (badness 1067) in paragraph at lines 5293--5300 \T1/ptm/m/n/10 The lat-ter will only be avail-able if the sys-tem was com-piled with sup- [920] [921] [922] [923] Underfull \hbox (badness 1377) in paragraph at lines 5595--5600 []\T1/ptm/m/n/10 a char-ac-ter string de-scrib-ing the color model: cur-rently al-lowed val-ues [924] [925] Underfull \hbox (badness 1377) in paragraph at lines 5699--5704 []\T1/ptm/m/n/10 Color mod-els pro-vided for back-wards com-pat-i-bil-ity are [ ]\T1/zi4/m/sl/10 "rgb" []\T1/ptm/m/n/10 (which is RGB+gray) and [926] Underfull \hbox (badness 7344) in paragraph at lines 5768--5770 []\T1/ptm/m/n/10 Support for Com-puter Mod-ern fonts is based on a con-tri-bu-t ion by Brian D'Urso [927] [928] Underfull \hbox (badness 2035) in paragraph at lines 5907--5916 []\T1/ptm/m/n/10 Mappings for a num-ber of stan-dard Adobe fonts (and URW equiv -a-lents) are also pro- Underfull \hbox (badness 10000) in paragraph at lines 5907--5916 \T1/ptm/m/n/10 vided: []\T1/zi4/m/sl/10 "AvantGarde"[]\T1/ptm/m/n/10 , []\T1/zi 4/m/sl/10 "Bookman"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Courier"[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/sl/10 "Helvetica"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Helveti ca-Narrow"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 5907--5916 []\T1/zi4/m/sl/10 "NewCenturySchoolbook"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "P alatino" []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 "Times"[]\T1/ptm/m/n/10 ; []\T1 /zi4/m/sl/10 "URWGothic"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "URWBookman"[]\T1/ ptm/m/n/10 , [929] Underfull \hbox (badness 10000) in paragraph at lines 5973--5978 []\T1/zi4/m/sl/10 BousungEG-Light-GB []\T1/ptm/m/n/10 can be found at [][]$\T1/ zi4/m/sl/10 https : / / ftp . gnu . org / pub / non-[]gnu / [930] [931] [932] Underfull \hbox (badness 1546) in paragraph at lines 6114--6122 []\T1/ptm/m/n/10 arguments []\T1/zi4/m/sl/10 onefile[]\T1/ptm/m/n/10 , []\T1/zi 4/m/sl/10 family[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 title[]\T1/ptm/m/n/10 , [] \T1/zi4/m/sl/10 fonts[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 encoding[]\T1/ptm/m/n /10 , []\T1/zi4/m/sl/10 bg[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 fg[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/sl/10 width[]\T1/ptm/m/n/10 , [933] [934] [935] [936] [937] [938] Underfull \hbox (badness 6625) in paragraph at lines 6558--6561 []\T1/ptm/m/n/10 Murrell, P., Ooms, J., Al-laire, J.J. (2015), "Record-ing and Re-play-ing the Graph- [939] [940] Underfull \hbox (badness 10000) in paragraph at lines 6662--6665 []\T1/zi4/m/sl/10 rgb2hsv []\T1/ptm/m/n/10 trans-forms col-ors from RGB space ( red/green/blue) into HSV space [941] [942] [943] [944] Overfull \hbox (9.73488pt too wide) in paragraph at lines 6899--6899 []\T1/zi4/m/n/9 ## but now, x in [-0.5, 20] -- "too far" ==> "wrap around" pro blem (without \TS1/zi4/m/n/9 '\T1/zi4/m/n/9 continuous=TRUE\TS1/zi4/m/n/9 '\T1/ zi4/m/n/9 ):[] [945] [946] [947] [948] [949] [950] [951] [952] [953] [954] Underfull \hbox (badness 1189) in paragraph at lines 7528--7530 []\T1/ptm/m/n/10 for cairo types, the type of anti-aliasing (if any) to be used . One of [955] Underfull \hbox (badness 10000) in paragraph at lines 7633--7635 []\T1/zi4/m/sl/10 "-*-mincho-%s-%s-*-*-%d-*-*-*-*-*-*-*" []\T1/ptm/m/n/10 for C JK lan-guages and [956] [957] [958] [959] [960] [961] [962] [963] [964]) (./graphics-pkg.tex Chapter 5. [965] [966] [967] [968] [969] [970] [971] [972] [973] [974] [975] Underfull \vbox (badness 3803) has occurred while \output is active [976] [977] [978] [979] [980] [981] Overfull \hbox (12.71341pt too wide) in paragraph at lines 1038--1038 [] \T1/zi4/m/n/9 main = "barplot(Freq ~ Class + Survived, *)", ylab = " # {passengers}", legend.text = TRUE)[] [982] [983] [984] [985] [986] [987] Underfull \hbox (badness 4634) in paragraph at lines 1411--1414 [][][]\T1/zi4/m/sl/10 boxplot.default[][][] []\T1/ptm/m/n/10 which al-ready wor ks nowa-days with data.frames; [][][]\T1/zi4/m/sl/10 boxplot.formula[][][][]\T1 /ptm/m/n/10 , [988] [989] [990] [991] [992] [993] [994] [995] [996] [997] [998] [999] [1000] [1001] [1002] [1003] [1004] Underfull \hbox (badness 1728) in paragraph at lines 2389--2391 []\T1/ptm/m/n/10 a string in-di-cat-ing the x-axis style; use []\T1/zi4/m/sl/10 "n" []\T1/ptm/m/n/10 to sup-press and see also [1005] Underfull \hbox (badness 1009) in paragraph at lines 2482--2489 \T1/ptm/m/n/10 be in as-cend-ing or-der. (The rest of this de-scrip-tion does n ot ap-ply to [1006] [1007] [1008] [1009] [1010] [1011] [1012] [1013] [1014] [1015] [1016] [1017] [1018] [1019] [1020] [1021] [1022] [1023] [1024] [1025] [1026] [1027] [1028] [1029] Underfull \vbox (badness 10000) has occurred while \output is active [1030] Underfull \vbox (badness 10000) has occurred while \output is active [1031] [1032] [1033] [1034] [1035] [1036] [1037] [1038] [1039] [1040] [1041] [1042] Underfull \hbox (badness 3229) in paragraph at lines 4756--4761 []\T1/ptm/m/n/10 a char-ac-ter string in-di-cat-ing if log-a-rith-mic axes are to be used, see [1043] [1044] [1045] [1046] [1047] Underfull \hbox (badness 1107) in paragraph at lines 5255--5261 []\T1/ptm/m/n/10 is []\T1/zi4/m/sl/10 par("cin")/par("pin") []\T1/ptm/m/n/10 sc aled to user co-or-di-nates. Note that []\T1/zi4/m/sl/10 c([][]strwidth[][][](c h), [1048] [1049] Underfull \hbox (badness 10000) in paragraph at lines 5384--5387 [1050 ] Underfull \hbox (badness 10000) in paragraph at lines 5445--5447 Underfull \vbox (badness 10000) has occurred while \output is active [1051] [1052 ] [1053] [1054] [1055] [1056] [1057] [1058] [1059] [1060] [1061] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.plot}) ha s been already used, duplicate ignored \relax l.6120 \aliasA{plot}{plot.default}{plot} [1062] [1063] [1064] [1065] [1066] [1067] [1068] [1069] [1070] [1071] [1072] [1073] [1074] [1075] Overfull \hbox (31.57222pt too wide) in paragraph at lines 7026--7027 [][] [1076] [1077 ] [1078] [1079] [1080] [1081] [1082] [1083] [1084] [1085] [1086] [1087] [1088] [1089] [1090] [1091] [1092] [1093] [1094] [1095] [1096] [1097] [1098] [1099] [1100] [1101] [1102] [1103] [1104] [1105] [1106] [1107] [1108] [1109] [1110] [1111] Underfull \hbox (badness 4954) in paragraph at lines 9140--9142 []\T1/ptm/m/n/10 Sub-title (at bot-tom) us-ing font, size and color []\T1/zi4/m /sl/10 par(c("font.sub", Underfull \hbox (badness 1019) in paragraph at lines 9142--9144 []\T1/ptm/m/n/10 X axis la-bel us-ing font, size and color []\T1/zi4/m/sl/10 pa r(c("font.lab", "cex.lab", [1112] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.units}) h as been already used, duplicate ignored \relax l.9222 \HeaderA{units}{Graphical Units}{units} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.units.1}) has been already used, duplicate ignored \relax l.9222 \HeaderA{units}{Graphical Units}{units} [1113] [1114] [1115] [1116]) (./grid-pkg.tex Chapter 6. [1117] [1118] [1119] [1120] [1121] [1122] [1123] [1124] [1125] Underfull \hbox (badness 2680) in paragraph at lines 551--554 []\T1/ptm/m/n/10 Note that []\T1/zi4/m/sl/10 preDrawDetails []\T1/ptm/m/n/10 an d []\T1/zi4/m/sl/10 postDrawDetails []\T1/ptm/m/n/10 are also called in the cal -cu-la-tion of [1126] [1127] [1128] [1129] [1130] [1131] [1132] [1133] [1134] [1135] [1136] Underfull \hbox (badness 4279) in paragraph at lines 1188--1197 [][][]\T1/ptm/m/n/10 Grid[][][], [][][]\T1/zi4/m/sl/10 pushViewport[][][][]\T1/ ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 popViewport[][][][]\T1/ptm/m/n/10 , [][][]\T 1/zi4/m/sl/10 downViewport[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 seekVi ewport[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 upViewport[][][][]\T1/ptm/ m/n/10 , [][][]\T1/zi4/m/sl/10 unit[][][][]\T1/ptm/m/n/10 , [1137] [1138] [1139] [1140] [1141] [1142] [1143] [1144] [1145] [1146] [1147] [1148] [1149] [1150] [1151] [1152] [1153] [1154] [1155] [1156] [1157] [1158] [1159] [1160] [1161] [1162] [1163] [1164] [1165] [1166] [1167] [1168] Underfull \hbox (badness 10000) in paragraph at lines 3103--3105 []\T1/ptm/m/n/10 A func-tion that re-turns an affine trans-for-ma-tion ma-trix; see [1169] [1170] [1171] [1172] [1173] [1174] [1175] [1176] [1177] [1178] [1179] [1180] [1181] [1182] [1183] [1184] Underfull \vbox (badness 10000) has occurred while \output is active [1185] [1186] [1187] [1188] [1189] [1190] [1191] [1192] [1193] [1194] [1195] [1196] [1197] [1198] Underfull \hbox (badness 1067) in paragraph at lines 4843--4846 []\T1/ptm/m/n/10 Both func-tions cre-ate a seg-ments grob (a graph-i-cal ob-jec t de-scrib-ing seg-ments), but only [1199] [1200] [1201] [1202] [1203] [1204] Underfull \hbox (badness 7256) in paragraph at lines 5194--5196 []\T1/ptm/m/n/10 A char-ac-ter or [][]ex-pres-sion[][][] vec-tor. Other ob-ject s are co-erced by [1205] [1206] [1207] [1208] [1209] [1210] [1211] Underfull \hbox (badness 2142) in paragraph at lines 5648--5652 []\T1/ptm/m/n/10 ob-jects. For []\T1/zi4/m/sl/10 gridGTreeCoords []\T1/ptm/m/n/ 10 a list of ei-ther []\T1/zi4/m/sl/10 "GridGrobCoords" []\T1/ptm/m/n/10 or [1212] [1213] Underfull \hbox (badness 4699) in paragraph at lines 5730--5735 []\T1/ptm/m/n/10 Either a []\T1/zi4/m/sl/10 "GridGrobCoords" []\T1/ptm/m/n/10 o b-ject (a list of lists with com-po-nents []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 y[]\T1/ptm/m/n/10 ) or a [1214] [1215] [1216] [1217] [1218] [1219] [1220] [1221] [1222] [1223] [1224] [1225] [1226] [1227] [1228] [1229] [1230] [1231] [1232] [1233] [1234] [1235] [1236] [1237] [1238] [1239] [1240] [1241] [1242] [1243] [1244] [1245]) (./methods-pkg.tex [1246] Chapter 7. [1247] [1248] [1249] [1250] [1251] [1252] [1253] [1254] Underfull \vbox (badness 10000) has occurred while \output is active [1255] Underfull \vbox (badness 10000) has occurred while \output is active [1256] [1257] [1258] [1259] [1260] [1261] [1262] [1263] [1264] [1265] Underfull \hbox (badness 2237) in paragraph at lines 1383--1385 []\T1/ptm/m/n/10 The class []\T1/zi4/m/sl/10 "className" []\T1/ptm/m/n/10 ex-te nds []\T1/zi4/m/sl/10 "character" []\T1/ptm/m/n/10 and has a slot []\T1/zi4/m/s l/10 "package"[]\T1/ptm/m/n/10 , also of class [1266] [1267] [1268] [1269] [1270] [1271] [1272] [1273] [1274] Underfull \hbox (badness 10000) in paragraph at lines 1979--1984 []\T1/ptm/m/n/10 The ar-gu-ment to []\T1/zi4/m/sl/10 insertSource []\T1/ptm/m/n /10 can be an ob-ject of class Underfull \hbox (badness 1038) in paragraph at lines 1979--1984 \T1/ptm/m/n/10 file name is passed to []\T1/zi4/m/sl/10 insertSource []\T1/ptm/ m/n/10 it calls []\T1/zi4/m/sl/10 evalSource []\T1/ptm/m/n/10 to ob-tain the [1275] [1276] [1277] Underfull \hbox (badness 2213) in paragraph at lines 2211--2216 []\T1/ptm/m/n/10 To re-strict the search to classes in a par-tic-u-lar pack-age , use []\T1/zi4/m/sl/10 where = [1278] [1279] [1280] [1281] [1282] Underfull \hbox (badness 10000) in paragraph at lines 2572--2575 []\T1/ptm/m/n/10 As you might ex-pect [][][]\T1/zi4/m/sl/10 setGeneric[][][] [] \T1/ptm/m/n/10 and [][][]\T1/zi4/m/sl/10 setGroupGeneric[][][] []\T1/ptm/m/n/10 cre-ate ob-jects of class [1283] [1284] Underfull \hbox (badness 1132) in paragraph at lines 2712--2716 []\T1/ptm/m/n/10 In []\T1/zi4/m/sl/10 getGenerics[]\T1/ptm/m/n/10 , if []\T1/zi 4/m/sl/10 TRUE[]\T1/ptm/m/n/10 , the []\T1/zi4/m/sl/10 package []\T1/ptm/m/n/10 slot of the re-turned re-sult is in [1285] Underfull \hbox (badness 1033) in paragraph at lines 2748--2753 \T1/ptm/m/n/10 In ad-di-tion, []\T1/zi4/m/sl/10 removeGeneric []\T1/ptm/m/n/10 re-moves the func-tion it-self; []\T1/zi4/m/sl/10 removeMethods []\T1/ptm/m/n/1 0 re-stores the [1286] [1287] [1288] [1289] [1290] [1291] [1292] Underfull \hbox (badness 1102) in paragraph at lines 3305--3307 []\T1/zi4/m/sl/10 getPackageName []\T1/ptm/m/n/10 re-turns the character-string name of the pack-age (with-out the ex-tra-ne-ous [1293] [1294] [1295] [1296] [1297] Underfull \hbox (badness 10000) in paragraph at lines 3642--3651 []\T1/ptm/m/n/10 The [1298] [1299] Underfull \hbox (badness 10000) in paragraph at lines 3762--3763 [] \T1/zi4/m/sl/10 Pos <- setClass("Pos", slots = c(latitude = "numeric", longi tude = "numeric", [1300] Underfull \hbox (badness 10000) in paragraph at lines 3846--3847 []\T1/zi4/m/sl/10 Currency <- setClass("Currency", slots = c(unit = "character" ), contains = [1301] [1302] [1303] [1304] [1305] [1306] [1307] [1308] [1309] [1310] Underfull \hbox (badness 1769) in paragraph at lines 4477--4483 []\T1/ptm/m/n/10 class [][][]\T1/zi4/m/sl/10 MethodsList[][][] []\T1/ptm/m/n/10 for the ob-jects defin-ing sets of meth-ods as-so-ci-ated with a par-tic-u-lar Underfull \hbox (badness 1939) in paragraph at lines 4477--4483 []\T1/zi4/m/sl/10 MethodDefinition[]\T1/ptm/m/n/10 , or an ex-ten-sion. Class [ ][][]\T1/zi4/m/sl/10 MethodWithNext[][][] []\T1/ptm/m/n/10 for an ex-ten-sion u sed by [1311] [1312] [1313] [1314] [1315] [1316] [1317] [1318] [1319] Underfull \vbox (badness 10000) has occurred while \output is active [1320] [1321] [1322] Underfull \hbox (badness 4036) in paragraph at lines 5379--5382 []\T1/ptm/m/n/10 Object of class []\T1/zi4/m/sl/10 "PossibleMethod" []\T1/ptm/m /n/10 the method to use in re-sponse to a [1323] [1324] Underfull \hbox (badness 3803) in paragraph at lines 5452--5454 []\T1/ptm/m/n/10 arguments to spec-ify prop-er-ties of the new ob-ject, to be p assed to [1325] [1326] [1327] Underfull \hbox (badness 1087) in paragraph at lines 5683--5688 []\T1/ptm/m/n/10 In ad-di-tion, the cur-rently avail-able gener-ics with meth-o ds for this class are found (us-ing [1328] [1329] [1330] [1331] [1332] [1333] [1334] [1335] [1336] Underfull \hbox (badness 1675) in paragraph at lines 6390--6396 []\T1/ptm/m/n/10 can be con-verted ex-plic-itly as []\T1/zi4/m/sl/10 externalRe fMethod(f)[]\T1/ptm/m/n/10 , which re-turns an ob-ject of class [1337] [1338] [1339] [1340] Underfull \vbox (badness 10000) has occurred while \output is active [1341] [1342] [1343] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.S4}) has been already used, duplicate ignored \relax l.6911 \aliasA{S4}{S3Part}{S4} [1344] [1345] [1346] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Complex}) has been already used, duplicate ignored \relax l.7167 \aliasA{Complex}{S4groupGeneric}{Complex} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Logic}) h as been already used, duplicate ignored \relax l.7169 \aliasA{Logic}{S4groupGeneric}{Logic} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Math}) ha s been already used, duplicate ignored \relax l.7170 \aliasA{Math}{S4groupGeneric}{Math} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.matrixOps }) has been already used, duplicate ignored \relax l.7172 ...sA{matrixOps}{S4groupGeneric}{matrixOps} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Ops}) has been already used, duplicate ignored \relax l.7173 \aliasA{Ops}{S4groupGeneric}{Ops} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Summary}) has been already used, duplicate ignored \relax l.7174 \aliasA{Summary}{S4groupGeneric}{Summary} [1347] Underfull \hbox (badness 2050) in paragraph at lines 7236--7240 []\T1/ptm/m/n/10 The mem-bers of the group de-fined by a par-tic-u-lar generic can be ob-tained by call-ing [1348] [1349] [1350] Underfull \hbox (badness 1286) in paragraph at lines 7424--7426 []\T1/ptm/m/n/10 for []\T1/zi4/m/sl/10 .selectSuperClasses() []\T1/ptm/m/n/10 o nly, a [][][]\T1/zi4/m/sl/10 list[][][] []\T1/ptm/m/n/10 of class ex-ten-sions, typ-i-cally [1351] [1352] [1353] [1354] [1355] [1356] [1357] [1358] [1359] [1360] [1361] [1362] [1363] [1364] [1365] [1366] [1367] [1368] [1369] [1370] [1371] [1372] [1373] [1374] [1375] [1376] [1377] [1378] Underfull \vbox (badness 10000) has occurred while \output is active [1379] [1380] [1381] [1382] [1383] [1384] [1385] [1386] [1387] [1388] [1389] [1390] [1391] [1392] Underfull \hbox (badness 1158) in paragraph at lines 10432--10435 []\T1/ptm/m/n/10 Chambers, John M. (2009) \T1/ptm/m/it/10 Class In-her-i-tance in R [][]$\T1/zi4/m/sl/10 https : / / johnmchambers . su . domains / [1393] Underfull \hbox (badness 1852) in paragraph at lines 10510--10514 []\T1/ptm/m/n/10 Each of the classes ex-tends the cor-re-spond-ing un-traced cl ass, from the data part; e.g., [1394] [1395] [1396] [1397]) (./parallel-pkg.tex [1398] Chapter 8. Underfull \hbox (badness 5490) in paragraph at lines 14--16 []\T1/ptm/m/n/10 There is sup-port for mul-ti-ple RNG streams with the `[]\T1/z i4/m/sl/10 "L\TS1/zi4/m/n/10 '\T1/zi4/m/sl/10 Ecuyer-CMRG"[]\T1/ptm/m/n/10 ' [] []RNG[][][]: see [1399] [1400] [1401] [1402] [1403] Underfull \hbox (badness 1320) in paragraph at lines 300--303 []\T1/ptm/m/n/10 It has meth-ods to do so for Linux, ma-cOS, FreeBSD, OpenBSD, So-laris and Win-dows. [1404] [1405] [1406] [1407] [1408] [1409] [1410] [1411] [1412] [1413] [1414] [1415] [1416] [1417] [1418] [1419] [1420] Underfull \hbox (badness 3386) in paragraph at lines 1416--1419 []\T1/ptm/m/n/10 An in-te-ger vec-tor of length 7 as given by []\T1/zi4/m/sl/10 .Random.seed []\T1/ptm/m/n/10 when the [1421] [1422] [1423]) (./splines-pkg.tex [1424] Chapter 9. Underfull \hbox (badness 10000) in paragraph at lines 22--24 []\T1/ptm/m/n/10 Douglas M. Bates \T1/zi4/m/sl/10 \T1/ptm /m/n/10 and William N. Ven-ables [1425] [1426] [1427] [1428] [1429] [1430] [1431] [1432] [1433] [1434] [1435] [1436] [1437] [1438] [1439] [1440]) (./stats-pkg.tex Chapter 10. [1441] [1442] [1443] [1444] [1445] [1446] [1447] [1448] [1449] [1450] [1451] [1452] [1453] [1454] Underfull \hbox (badness 1412) in paragraph at lines 901--903 []\T1/ptm/m/n/10 A fit-ted model ob-ject, for ex-am-ple from []\T1/zi4/m/sl/10 lm []\T1/ptm/m/n/10 or []\T1/zi4/m/sl/10 aov[]\T1/ptm/m/n/10 , or a for-mula fo r [1455] [1456] [1457] [1458] [1459] [1460] [1461] [1462] Underfull \hbox (badness 2503) in paragraph at lines 1389--1392 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1463] [1464] [1465] [1466] [1467] [1468] [1469] [1470] [1471] [1472] [1473] [1474] [1475] [1476] [1477] [1478] [1479] [1480] [1481] [1482] [1483] [1484] [1485] [1486] [1487] [1488] [1489] [1490] [1491] [1492] [1493] [1494] [1495] [1496] Underfull \hbox (badness 2503) in paragraph at lines 3571--3574 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1497] [1498] Package amsmath Warning: Foreign command \atopwithdelims; (amsmath) \frac or \genfrac should be used instead (amsmath) on input line 3684. [1499] [1500] [1501] [1502] [1503] [1504] [1505] [1506] [1507] [1508] [1509] [1510] [1511] [1512] [1513] [1514] [1515] [1516] Underfull \hbox (badness 3989) in paragraph at lines 4830--4837 []\T1/ptm/m/n/10 a nu-meric vec-tor of length 2, equal to say $\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 g[]; g[]\OT1/cmr/m/n/10 )$\T1/ptm/m/n/10 , where $\OML/cmm/m/ it/10 g[] \OT1/cmr/m/n/10 = [1517] [1518] [1519] [1520] [1521] [1522] [1523] [1524] [1525] [1526] Underfull \hbox (badness 2556) in paragraph at lines 5484--5487 []\T1/ptm/m/n/10 character; par-tially matched to []\T1/zi4/m/sl/10 "circular"[ ]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "open"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "filter"[]\T1/ptm/m/n/10 . For [1527] [1528] [1529] [1530] [1531] [1532] [1533] Underfull \hbox (badness 2503) in paragraph at lines 5896--5900 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1534] [1535] [1536] [1537] [1538] [1539] [1540] [1541] [1542] [1543] [1544] [1545] [1546] Underfull \hbox (badness 7081) in paragraph at lines 6695--6698 []\T1/ptm/m/n/10 Objects of class []\T1/zi4/m/sl/10 "hclust" []\T1/ptm/m/n/10 c an be con-verted to class []\T1/zi4/m/sl/10 "dendrogram" []\T1/ptm/m/n/10 us-in g method Underfull \hbox (badness 10000) in paragraph at lines 6699--6701 []\T1/zi4/m/sl/10 rev.dendrogram []\T1/ptm/m/n/10 sim-ply re-turns the den-dro- gram []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 with re-versed nodes, see also [1547] [1548] [1549] [1550] [1551] [1552] Underfull \vbox (badness 10000) has occurred while \output is active [1553] [1554] [1555] Underfull \vbox (badness 10000) has occurred while \output is active [1556] [1557] [1558] [1559] [1560] Underfull \hbox (badness 10000) in paragraph at lines 7595--7598 []\T1/ptm/m/n/10 optionally, the dis-tance method used; re-sult-ing from []\T1/ zi4/m/sl/10 dist()[]\T1/ptm/m/n/10 , the [1561] [1562] [1563] [1564] [1565] [1566] Underfull \vbox (badness 3803) has occurred while \output is active [1567] [1568] [1569] [1570] [1571] [1572] [1573] [1574] [1575] Underfull \hbox (badness 1960) in paragraph at lines 8472--8475 []\T1/ptm/m/n/10 the [][][]\T1/zi4/m/sl/10 na.action[][][] []\T1/ptm/m/n/10 to be used if []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 is used as a for-mula, in which case [1576] [1577] [1578] [1579] [1580] [1581] [1582] Underfull \vbox (badness 3803) has occurred while \output is active [1583] [1584] [1585] [1586] [1587] [1588] Underfull \hbox (badness 2626) in paragraph at lines 9295--9298 []\T1/ptm/m/n/10 Either []\T1/zi4/m/sl/10 "convolution" []\T1/ptm/m/n/10 or []\ T1/zi4/m/sl/10 "recursive" []\T1/ptm/m/n/10 (and can be ab-bre-vi-ated). If [1589] Underfull \hbox (badness 2503) in paragraph at lines 9402--9406 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1590] [1591] [1592] [1593] [1594] [1595] [1596] [1597] [1598] [1599] [1600] [1601] [1602] [1603] [1604] [1605] [1606] [1607] [1608] [1609] [1610] Underfull \hbox (badness 4518) in paragraph at lines 10750--10755 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1611] [1612] [1613] [1614] [1615] Underfull \hbox (badness 2142) in paragraph at lines 11112--11115 []\T1/ptm/m/n/10 positive con-ver-gence tol-er-ance $\OML/cmm/m/it/10 ^^O$\T1/p tm/m/n/10 ; the it-er-a-tions con-verge when $\OMS/cmsy/m/n/10 j\OML/cmm/m/it/1 0 dev \OMS/cmsy/m/n/10 ^^@ Underfull \hbox (badness 1253) in paragraph at lines 11131--11134 []\T1/ptm/m/n/10 When []\T1/zi4/m/sl/10 trace []\T1/ptm/m/n/10 is true, calls t o [][][]\T1/zi4/m/sl/10 cat[][][] []\T1/ptm/m/n/10 pro-duce the out-put for eac h IWLS it-er-a-tion. Hence, [1616] Underfull \hbox (badness 1708) in paragraph at lines 11193--11197 []\T1/ptm/m/n/10 the type of resid-u-als which should be re-turned. The al-ter- na-tives are: [1617] [1618] [1619] [1620] [1621] [1622] Underfull \hbox (badness 1694) in paragraph at lines 11591--11594 []\T1/ptm/m/n/10 character vec-tors with row and col-umn la-bels to use; these de-fault to [1623] [1624] [1625] [1626] [1627] [1628] [1629] [1630] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.hat}) has been already used, duplicate ignored \relax l.12089 \aliasA{hat}{influence.measures}{hat} [1631] [1632] Underfull \hbox (badness 1484) in paragraph at lines 12234--12236 []\T1/ptm/m/n/10 The func-tion []\T1/zi4/m/sl/10 hat() []\T1/ptm/m/n/10 ex-ists mainly for S (ver-sion 2) com-pat-i-bil-ity; we rec-om-mend us-ing [1633] [1634] [1635] [1636] [1637] [1638] [1639] [1640] [1641] [1642] Underfull \hbox (badness 10000) in paragraph at lines 12821--12823 []\T1/ptm/m/n/10 tolerance even-tu-ally passed to [][][]\T1/zi4/m/sl/10 solve.d efault[][][] []\T1/ptm/m/n/10 when []\T1/zi4/m/sl/10 SSinit = [1643] [1644] [1645] [1646] [1647] [1648] Underfull \hbox (badness 2894) in paragraph at lines 13163--13167 []\T1/ptm/m/n/10 logical or in-te-ger num-ber, cur-rently only used in the de-f ault method [1649] [1650] [1651] [1652] [1653] [1654] Underfull \hbox (badness 1496) in paragraph at lines 13591--13597 []\T1/ptm/m/n/10 Gunar Schr�er and Di-et-rich Tren-kler (1995). Ex-act and Ran- dom-iza-tion Dis-tri-bu-tions of [1655] [1656] [1657] [1658] [1659] [1660] [1661] Underfull \hbox (badness 4518) in paragraph at lines 13994--13999 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1662] [1663] [1664] [1665] [1666] [1667] [1668] [1669] [1670] Underfull \hbox (badness 1596) in paragraph at lines 14625--14628 \T1/ptm/m/n/10 to []\T1/zi4/m/sl/10 print(, ...)[]\T1/ptm/m/n/10 , he nce, e.g., []\T1/zi4/m/sl/10 cutoff = []\T1/ptm/m/n/10 ; ig-nored for [1671] Underfull \hbox (badness 4518) in paragraph at lines 14683--14688 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1672] [1673] [1674] Underfull \hbox (badness 6412) in paragraph at lines 14823--14827 []\T1/ptm/m/n/10 Only for the (de-fault) case []\T1/zi4/m/sl/10 (surface = "int erpolate", statistics = Underfull \hbox (badness 1199) in paragraph at lines 14830--14832 []\T1/ptm/m/n/10 the num-ber of it-er-a-tions used in ro-bust fit-ting, i.e. on ly if []\T1/zi4/m/sl/10 family []\T1/ptm/m/n/10 is [1675] [1676] [1677] [1678] [1679] [1680] [1681] [1682] [1683] [1684] [1685] [1686] [1687] [1688] [1689] [1690] [1691] [1692] Underfull \hbox (badness 2503) in paragraph at lines 15907--15911 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1693] [1694] [1695] [1696] [1697] [1698] [1699] [1700] Underfull \hbox (badness 10000) in paragraph at lines 16420--16426 []\T1/zi4/m/sl/10 model.extract(m, "offset") []\T1/ptm/m/n/10 and []\T1/zi4/m/s l/10 model.extract(m, "response") []\T1/ptm/m/n/10 are equiv-a-lent to Underfull \hbox (badness 1867) in paragraph at lines 16420--16426 []\T1/zi4/m/sl/10 model.offset(m) []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 model. response(m) []\T1/ptm/m/n/10 re-spec-tively. []\T1/zi4/m/sl/10 model.offset []\ T1/ptm/m/n/10 sums any terms [1701] [1702] [1703] [1704] [1705] [1706] [1707] [1708] [1709] [1710] [1711] [1712] [1713] [1714] [1715] [1716] [1717] [1718] [1719] [1720] [1721] [1722] [1723] [1724] [1725] [1726] [1727] Underfull \hbox (badness 1158) in paragraph at lines 18078--18081 []\T1/ptm/m/n/10 the ex-pres-sion that was passed to []\T1/zi4/m/sl/10 nls []\T 1/ptm/m/n/10 as the data ar-gu-ment. The ac- [1728] [1729] Underfull \vbox (badness 10000) has occurred while \output is active [1730] Underfull \vbox (badness 10000) has occurred while \output is active [1731] [1732] [1733] [1734] [1735] [1736] [1737] [1738] [1739] [1740] [1741] [1742] [1743] [1744] Underfull \hbox (badness 1377) in paragraph at lines 19123--19128 []\T1/ptm/m/n/10 A vec-tor of scal-ing val-ues for the pa-ram-e-ters. Op-ti-miz a-tion is per-formed on Underfull \hbox (badness 1735) in paragraph at lines 19128--19131 []\T1/ptm/m/n/10 A vec-tor of step sizes for the finite-difference ap-prox-i-ma -tion to the gra-di-ent, on Underfull \hbox (badness 2343) in paragraph at lines 19141--19145 []\T1/ptm/m/n/10 Relative con-ver-gence tol-er-ance. The al-go-rithm stops if i t is un-able to re-duce Underfull \hbox (badness 3471) in paragraph at lines 19141--19145 \T1/ptm/m/n/10 the value by a fac-tor of []\T1/zi4/m/sl/10 reltol * (abs(val) + reltol) []\T1/ptm/m/n/10 at a step. De-faults to Underfull \hbox (badness 2662) in paragraph at lines 19149--19153 []\T1/ptm/m/n/10 The fre-quency of re-ports for the []\T1/zi4/m/sl/10 "BFGS"[]\ T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "L-BFGS-B" []\T1/ptm/m/n/10 and []\T1/zi4/m/s l/10 "SANN" []\T1/ptm/m/n/10 meth-ods if [1745] [1746] [1747] Underfull \vbox (badness 10000) has occurred while \output is active [1748] Overfull \hbox (15.73795pt too wide) in paragraph at lines 19374--19374 []\T1/zi4/m/n/9 ## 1-D minimization: "Brent" or optimize() being preferred.. b ut NM may be ok and "unavoidable",[] Overfull \hbox (3.75941pt too wide) in paragraph at lines 19377--19377 []\T1/zi4/m/n/9 system.time(ro <- optim(1, function(x) (x-pi)^2, control=list( warn.1d.NelderMead = FALSE)))[] [1749] [1750] [1751] [1752] [1753] [1754] [1755] Underfull \hbox (badness 1337) in paragraph at lines 19839--19842 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1756] [1757] [1758] [1759] [1760] [1761] [1762] [1763] [1764] Underfull \hbox (badness 10000) in paragraph at lines 20308--20314 \T1/zi4/m/sl/10 legend = "Cook\TS1/zi4/m/n/10 '\T1/zi4/m/sl/10 s distance", lty = cook.lty, col = cook.col, text.col [1765] [1766] [1767] [1768] [1769] [1770] [1771] Underfull \hbox (badness 1194) in paragraph at lines 20735--20738 []\T1/ptm/m/n/10 coverage prob-a-bil-ity for con-fi-dence in-ter-val. Plot-ting of the con-fi-dence [1772] [1773] [1774] [1775] [1776] [1777] Underfull \hbox (badness 2503) in paragraph at lines 21113--21116 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3919) in paragraph at lines 21140--21142 []\T1/ptm/m/n/10 the char-ac-ter string []\T1/zi4/m/sl/10 "Exact Poisson test" []\T1/ptm/m/n/10 or []\T1/zi4/m/sl/10 "Comparison of Poisson [1778] [1779] [1780] [1781] [1782] [1783] [1784] [1785] [1786] [1787] [1788] [1789] [1790] [1791] [1792] [1793] [1794] [1795] Underfull \hbox (badness 10000) in paragraph at lines 22218--22224 []\T1/ptm/m/n/10 For time-series pre-dic-tion, [][][]\T1/zi4/m/sl/10 predict.ar [][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 predict.Arima[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/sl/10 predict.arima0[][][][]\T1/ptm/m/n/10 , [1796] [1797] [1798] [1799] [1800] [1801] [1802] [1803] [1804] [1805] [1806] [1807] [1808] [1809] [1810] [1811] [1812] [1813] [1814] [1815] [1816] [1817] [1818] [1819] [1820] Underfull \hbox (badness 1337) in paragraph at lines 23694--23700 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1821] [1822] [1823] [1824] [1825] [1826] [1827] [1828] Underfull \hbox (badness 1436) in paragraph at lines 24186--24189 \T1/ptm/m/n/10 per-cent-ages. In \T1/phv/m/n/10 R \T1/ptm/m/n/10 ver-sions up t o 4.0.x, this had been set to []\T1/zi4/m/sl/10 max(2, Underfull \hbox (badness 1009) in paragraph at lines 24189--24192 []\T1/ptm/m/n/10 small non-negative num-ber to pro-tect against round-ing er-ro rs when []\T1/zi4/m/sl/10 j <- [1829] [1830] Underfull \hbox (badness 10000) in paragraph at lines 24341--24342 []\T1/ptm/m/n/10 Wikipedia: [][]$\T1/zi4/m/sl/10 https : / / en . wikipedia . o rg / wiki / Quantile # Estimating _ quantiles _ from _ a _ [1831] [1832] [1833] [1834] [1835] [1836] [1837] [1838] [1839] [1840] [1841] [1842] [1843] [1844] [1845] [1846] Underfull \hbox (badness 1824) in paragraph at lines 25313--25319 []\T1/ptm/m/n/10 Here, all the NAs in []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 are first re-placed by al-ter- Underfull \hbox (badness 1033) in paragraph at lines 25313--25319 \T1/ptm/m/n/10 nat-ing $\OMS/cmsy/m/n/10 ^^F\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 where $\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 is a ``Big'' num-ber (with $\OT1/cmr/ m/n/10 2\OML/cmm/m/it/10 B < M\OMS/cmsy/m/n/10 ^^C$\T1/ptm/m/n/10 , where Underfull \hbox (badness 10000) in paragraph at lines 25334--25337 []\T1/ptm/m/n/10 Apart from the end val-ues, the re-sult []\T1/zi4/m/sl/10 y = runmed(x, k) []\T1/ptm/m/n/10 sim-ply has []\T1/zi4/m/sl/10 y[j] = [1847] [1848] [1849] [1850] [1851] [1852] [1853] [1854] Underfull \vbox (badness 10000) has occurred while \output is active [1855] [1856] Underfull \hbox (badness 2165) in paragraph at lines 25909--25914 []\T1/ptm/m/n/10 Each of the fol-low-ing are []\T1/zi4/m/sl/10 "selfStart" []\T 1/ptm/m/n/10 mod-els (with ex-am-ples) [][][]\T1/zi4/m/sl/10 SSasymp[][][][]\T1 /ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 SSasympOff[][][][]\T1/ptm/m/n/10 , [1857] [1858] [1859] Underfull \hbox (badness 1867) in paragraph at lines 26119--26121 []\T1/ptm/m/n/10 potentially fur-ther ar-gu-ments passed to and from meth-ods. Passed to Underfull \hbox (badness 10000) in paragraph at lines 26135--26139 []\T1/ptm/m/n/10 where []\T1/zi4/m/sl/10 NN <- [][]nobs[][][](object, use.fallb ack = use.fallback) []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 PP <- [1860] [1861] [1862] [1863] [1864] [1865] [1866] [1867] [1868] [1869] [1870] [1871] [1872] [1873] [1874] [1875] [1876] [1877] [1878] [1879] [1880] [1881] [1882] [1883] [1884] [1885] Underfull \vbox (badness 10000) has occurred while \output is active [1886] Underfull \hbox (badness 3514) in paragraph at lines 27787--27792 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1887] [1888] [1889] [1890] Overfull \hbox (2.23795pt too wide) in paragraph at lines 28021--28021 [] \T1/zi4/m/n/9 quote({f(t[0.5]) == frac(phi[1],2)}~{} %=>% {}~~{t[0.5] == frac(log(2), e^{phi[2]})}),[] [1891] Underfull \hbox (badness 3514) in paragraph at lines 28057--28063 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1892] Overfull \hbox (14.22568pt too wide) in paragraph at lines 28117--28117 [] \T1/zi4/m/n/9 control = list(scaleOffset=1, printEval=TRUE, tol= 1e-11, nDcentral=TRUE), trace=TRUE)[] [1893] [1894] [1895] Underfull \hbox (badness 3514) in paragraph at lines 28290--28295 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1896] [1897] Underfull \hbox (badness 3514) in paragraph at lines 28377--28382 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1898] Underfull \hbox (badness 3514) in paragraph at lines 28442--28447 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1899] [1900] Underfull \hbox (badness 3514) in paragraph at lines 28536--28541 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1901] Underfull \hbox (badness 6691) in paragraph at lines 28628--28633 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 x[] \T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1902] [1903] [1904] [1905] [1906] [1907] [1908] [1909] Underfull \hbox (badness 4024) in paragraph at lines 29115--29118 []\T1/ptm/m/n/10 the span (in lags) of the loess win-dow for trend ex-trac-tion , which [1910] [1911] [1912] [1913] [1914] [1915] [1916] [1917] [1918] [1919] Underfull \hbox (badness 5431) in paragraph at lines 29725--29727 []\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above []\T1 /zi4/m/sl/10 cov.unscaled[]\T1/ptm/m/n/10 , if [1920] [1921] [1922] [1923] Underfull \hbox (badness 5431) in paragraph at lines 29935--29938 []\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above []\T1 /zi4/m/sl/10 cov.unscaled[]\T1/ptm/m/n/10 , if [1924] [1925] [1926] [1927] [1928] Underfull \hbox (badness 1337) in paragraph at lines 30250--30254 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1929] [1930] [1931] Underfull \hbox (badness 1127) in paragraph at lines 30387--30390 []\T1/ptm/m/n/10 non-centrality pa-ram-e-ter $\OML/cmm/m/it/10 ^^N$\T1/ptm/m/n/ 10 ; cur-rently ex-cept for []\T1/zi4/m/sl/10 rt()[]\T1/ptm/m/n/10 , ac-cu-rate only for [1932] [1933] [1934] Underfull \hbox (badness 1616) in paragraph at lines 30593--30596 []\T1/ptm/m/n/10 color, plot-ting char-ac-ter ex-pan-sion and type for par-tial resid-u-als, when [1935] [1936] [1937] [1938] [1939] [1940] [1941] [1942] [1943] [1944] [1945] [1946] [1947] [1948] [1949] [1950] [1951] [1952] [1953] [1954] Underfull \hbox (badness 3557) in paragraph at lines 31823--31827 []\T1/ptm/m/n/10 Setting []\T1/zi4/m/sl/10 extendInt []\T1/ptm/m/n/10 to a non- []\T1/zi4/m/sl/10 "no" []\T1/ptm/m/n/10 string, means search-ing for the cor-re ct []\T1/zi4/m/sl/10 interval = [1955] [1956] [1957] Underfull \vbox (badness 10000) has occurred while \output is active [1958] [1959] [1960] Underfull \hbox (badness 1337) in paragraph at lines 32190--32194 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1961] [1962] [1963] [1964] [1965] [1966] [1967] [1968] [1969] Underfull \hbox (badness 1337) in paragraph at lines 32718--32722 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1970] [1971] [1972] Overfull \hbox (0.71648pt too wide) in paragraph at lines 32926--32926 []\T1/zi4/m/n/9 wilcox.test( 4:2, 3:1, paired=TRUE) # Warning: canno t compute exact p-value with ties[] [1973] [1974] [1975] Overfull \hbox (19.71954pt too wide) in paragraph at lines 33087--33087 [] \T1/zi4/m/sl/10 frequency = NULL, deltat = NULL, extend = FALSE, ts.ep s = getOption("ts.eps"), ...)[] [1976] [1977] [1978] [1979] [1980]) (./stats4-pkg.tex Chapter 11. [1981] [1982] [1983] Underfull \vbox (badness 10000) has occurred while \output is active [1984] Underfull \vbox (badness 10000) has occurred while \output is active [1985] [1986] [1987] [1988] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.show.Rdas h.methods}) has been already used, duplicate ignored \relax l.503 ...Package \pkg{stats4}}{show.Rdash.methods} [1989] [1990] [1991]) (./tcltk-pkg.tex [1992] Chapter 12. [1993] [1994] [1995] [1996] [1997] [1998] [1999] Underfull \vbox (badness 10000) has occurred while \output is active [2000] Underfull \vbox (badness 10000) has occurred while \output is active [2001] Underfull \hbox (badness 1546) in paragraph at lines 672--679 []\T1/zi4/m/sl/10 tcl []\T1/ptm/m/n/10 pro-vides a generic in-ter-face to call- ing any Tk or Tcl com-mand by sim-ply run-ning [2002] [2003] [2004] [2005] [2006] Underfull \vbox (badness 10000) has occurred while \output is active [2007] [2008] [2009] [2010] [2011] [2012] [2013] [2014]) (./tools-pkg.tex Chapter 13. [2015] LaTeX Font Warning: Font shape `T1/zi4/m/it' undefined (Font) using `T1/zi4/m/n' instead on input line 72. [2016] Underfull \hbox (badness 3039) in paragraph at lines 167--170 []\T1/zi4/m/sl/10 assertWarning() []\T1/ptm/m/n/10 as-serts that a warn-ing wil l be sig-nalled, but \T1/ptm/m/it/10 not \T1/ptm/m/n/10 an er-ror, whereas [2017] [2018] [2019] Underfull \hbox (badness 1308) in paragraph at lines 326--339 []\T1/ptm/m/n/10 At a min-i-mum, the en-vi-ron-ment should con-tain rou-tines t o ren-der each of the 12 types Underfull \hbox (badness 4967) in paragraph at lines 326--339 \T1/ptm/m/n/10 of bib-li-o-graphic en-try sup-ported by [][][]\T1/zi4/m/sl/10 b ibentry[][][] []\T1/ptm/m/n/10 as well as sev-eral other rou-tines de- Underfull \hbox (badness 10000) in paragraph at lines 326--339 []\T1/zi4/m/sl/10 formatIncollection[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 format InProceedings[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatManual[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatMastersthesis[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 326--339 []\T1/zi4/m/sl/10 formatMisc[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatPhdthesi s[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatProceedings[]\T1/ptm/m/n/10 , []\T1 /zi4/m/sl/10 formatTechreport []\T1/ptm/m/n/10 and [2020] [2021] Underfull \hbox (badness 3039) in paragraph at lines 430--432 []\T1/zi4/m/sl/10 NULL []\T1/ptm/m/n/10 or char-ac-ter; name of vi-gnette en-gi ne to use. Over-rides any [2022] Underfull \hbox (badness 1142) in paragraph at lines 502--506 \T1/ptm/m/n/10 If given, vi-gnette source files are by de-fault looked for in s ub-di-rec-tory [2023] [2024] [2025] [2026] [2027] [2028] [2029] [2030] [2031] [2032] [2033] [2034] [2035] Underfull \hbox (badness 1014) in paragraph at lines 1258--1260 []\T1/ptm/m/n/10 a log-i-cal in-di-cat-ing whether to also sum-ma-rize the re-v erse de-pen-den-cies Underfull \hbox (badness 7238) in paragraph at lines 1264--1266 []\T1/ptm/m/n/10 a char-ac-ter string giv-ing the path to the di-rec-tory of a pre-vi-ous [2036] Underfull \hbox (badness 10000) in paragraph at lines 1301--1304 []\T1/ptm/m/n/10 Results and tim-ings can con-ve-niently be sum-ma-rized us-ing Overfull \hbox (15.52087pt too wide) in paragraph at lines 1301--1304 []\T1/zi4/m/sl/10 summarize_check_packages_in_dir_results []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 summarize_check_packages_in_dir_timings[]\T1/ptm/m/n/10 , [2037] [2038] [2039] [2040] [2041] [2042] Underfull \hbox (badness 10000) in paragraph at lines 1696--1707 []\T1/ptm/m/n/10 Functions []\T1/zi4/m/sl/10 CRAN_package_db()[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 CRAN_check_results()[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 CR AN_check_details() []\T1/ptm/m/n/10 and [2043] [2044] Underfull \hbox (badness 4096) in paragraph at lines 1847--1855 \T1/zi4/m/sl/10 "Imports", "LinkingTo", "Suggests", "Enhances")[]\T1/ptm/m/n/10 . Char-ac-ter string [2045] Underfull \hbox (badness 1082) in paragraph at lines 1857--1859 []\T1/ptm/m/n/10 a char-ac-ter vec-tor of \T1/phv/m/n/10 R \T1/ptm/m/n/10 li-br ary trees, or []\T1/zi4/m/sl/10 NULL []\T1/ptm/m/n/10 for all known trees (see [2046] [2047] [2048] [2049] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.GSC}) has been already used, duplicate ignored \relax l.2102 \aliasA{GSC}{find\_gs\_cmd}{GSC} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.R.Rul.GSC MD}) has been already used, duplicate ignored \relax l.2103 ...sA{R\_GSCMD}{find\_gs\_cmd}{R.Rul.GSCMD} [2050] [2051] [2052] [2053] [2054] [2055] [2056] [2057] Underfull \hbox (badness 3386) in paragraph at lines 2644--2647 []\T1/ptm/m/n/10 The de-fault method of []\T1/zi4/m/sl/10 as.Rconcordance []\T1 /ptm/m/n/10 searches for strings match-ing the pat-tern of [2058] [2059] [2060] Underfull \hbox (badness 4096) in paragraph at lines 2791--2799 \T1/zi4/m/sl/10 "Imports", "LinkingTo", "Suggests", "Enhances")[]\T1/ptm/m/n/10 . Char-ac-ter string [2061] [2062] [2063] [2064] [2065] [2066] [2067] [2068] [2069] [2070] [2071] [2072] [2073] [2074] [2075] [2076] Underfull \hbox (badness 1424) in paragraph at lines 3815--3817 []\T1/zi4/m/sl/10 NULL []\T1/ptm/m/n/10 or a named (by top-ics) char-ac-ter vec -tor of links, as re-turned by [2077] [2078] [2079] [2080] [2081] [2082] [2083] [2084] [2085] [2086] [2087] [2088] Underfull \hbox (badness 10000) in paragraph at lines 4591--4593 []\T1/ptm/m/n/10 additional ar-gu-ments use when prepar-ing the files to be run , [2089] [2090] [2091] [2092] [2093] [2094] Overfull \hbox (6.71034pt too wide) in paragraph at lines 4913--4913 []\T1/zi4/m/n/9 toTitleCase("a small fox is jumping") # "a Small Fox is .." (the \TS1/zi4/m/n/9 '\T1/zi4/m/n/9 a\TS1/zi4/m/n/9 ' \T1/zi4/m/n/9 may cha nge)% i.e. BUG[] [2095] [2096] [2097] Underfull \hbox (badness 1796) in paragraph at lines 5122--5127 []\T1/ptm/m/n/10 Users should ex-pect sig-nif-i-cantly smaller speedups over [] \T1/zi4/m/sl/10 write_PACKAGES []\T1/ptm/m/n/10 in the []\T1/zi4/m/sl/10 type = = [2098] Underfull \hbox (badness 1838) in paragraph at lines 5208--5214 []\T1/ptm/m/n/10 The re-main-ing steps are done only if file `\T1/zi4/m/sl/10 p o/\T1/ptm/m/sl/10 pkgname\T1/zi4/m/sl/10 .pot\T1/ptm/m/n/10 ' al-ready ex-ists. The Underfull \hbox (badness 10000) in paragraph at lines 5208--5214 \T1/ptm/m/n/10 `\T1/zi4/m/sl/10 src/*.{c,cc,cpp,m,mm}\T1/ptm/m/n/10 ' files in the pack-age are ex-am-ined to cre-ate a file [2099] [2100] [2101] [2102] [2103] [2104] Underfull \hbox (badness 2197) in paragraph at lines 5560--5570 []\T1/ptm/m/n/10 The de-fault cor-re-sponds to the fields needed by [][][]\T1/z i4/m/sl/10 available.packages[][][][]\T1/ptm/m/n/10 : [2105] Underfull \hbox (badness 1571) in paragraph at lines 5626--5630 []\T1/ptm/m/n/10 For a re-mote repos-i-tory there is a trade-off be-tween down- load speed and time spent by [2106] [2107] [2108] [2109]) (./utils-pkg.tex [2110] Chapter 14. [2111] Underfull \hbox (badness 2556) in paragraph at lines 47--52 []\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `[] \T1/zi4/m/sl/10 insertions[]\T1/ptm/m/n/10 ', [2112] [2113] [2114] [2115] [2116] [2117] [2118] [2119] [2120] [2121] Underfull \hbox (badness 10000) in paragraph at lines 728--734 []\T1/ptm/m/n/10 Functions []\T1/zi4/m/sl/10 aspell_package_Rd_files[]\T1/ptm/m /n/10 , []\T1/zi4/m/sl/10 aspell_package_vignettes[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3343) in paragraph at lines 728--734 []\T1/zi4/m/sl/10 aspell_package_R_files []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 aspell_package_C_files []\T1/ptm/m/n/10 per-form spell check-ing on the [2122] [2123] [2124] Underfull \hbox (badness 3861) in paragraph at lines 943--948 []\T1/ptm/m/n/10 Where pro-vided by the repos-i-tory, fields []\T1/zi4/m/sl/10 "OS_type"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "License"[]\T1/ptm/m/n/10 , []\T1 /zi4/m/sl/10 "License_is_FOSS"[]\T1/ptm/m/n/10 , [2125] [2126] [2127] Underfull \hbox (badness 10000) in paragraph at lines 1148--1150 []\T1/ptm/m/n/10 logical in-di-cat-ing if biben-tries should be sorted, us-ing [2128] [2129] [2130] Underfull \vbox (badness 3803) has occurred while \output is active [2131] [2132] [2133] [2134] [2135] [2136] Underfull \hbox (badness 1371) in paragraph at lines 1675--1677 []\T1/ptm/m/n/10 additional named ar-gu-ments such as []\T1/zi4/m/sl/10 method []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 ccaddress []\T1/ptm/m/n/10 to pass to [2137] [2138] [2139] [2140] [2141] [2142] [2143] [2144] [2145] [2146] [2147] Underfull \hbox (badness 2057) in paragraph at lines 2395--2397 []\T1/ptm/m/n/10 None for []\T1/zi4/m/sl/10 chooseCRANmirror()[]\T1/ptm/m/n/10 , this func-tion is in-voked for its side ef-fect of up-dat-ing [2148] [2149] Underfull \hbox (badness 2150) in paragraph at lines 2481--2488 []\T1/ptm/m/n/10 If the ob-ject re-turned by []\T1/zi4/m/sl/10 citation() []\T1 /ptm/m/n/10 con-tains only one ref-er-ence, the as-so-ci-ated print Underfull \hbox (badness 1400) in paragraph at lines 2481--2488 \T1/ptm/m/n/10 method shows both a text ver-sion and a Bib-TeX en-try for it. I f a pack-age has more [2150] [2151] [2152] [2153] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.clipboard }) has been already used, duplicate ignored \relax l.2758 ... the Clipboard in MS Windows}{clipboard} [2154] [2155] [2156] [2157] [2158] [2159] [2160] [2161] [2162] [2163] [2164] [2165] [2166] [2167] [2168] [2169] [2170] [2171] [2172] [2173] [2174] Underfull \hbox (badness 6842) in paragraph at lines 4068--4073 []\T1/ptm/m/n/10 Support for method []\T1/zi4/m/sl/10 "libcurl" []\T1/ptm/m/n/1 0 was op-tional on Win-dows prior to \T1/phv/m/n/10 R \T1/ptm/m/n/10 4.2.0: use [2175] Underfull \hbox (badness 1430) in paragraph at lines 4131--4135 []\T1/ptm/m/n/10 The level of de-tail pro-vided dur-ing trans-fer can be set by the []\T1/zi4/m/sl/10 quiet []\T1/ptm/m/n/10 ar-gu-ment and the [2176] Underfull \hbox (badness 1184) in paragraph at lines 4207--4223 []\T1/ptm/m/n/10 On Win-dows with []\T1/zi4/m/sl/10 method = "libcurl"[]\T1/ptm /m/n/10 , the CA root cer-tifi-cates are pro-vided by the OS Underfull \hbox (badness 1019) in paragraph at lines 4207--4223 \T1/ptm/m/n/10 con-tain-ing `[]\T1/zi4/m/sl/10 "Schannel"[]\T1/ptm/m/n/10 '. If it does not, for ver-i-fi-ca-tion to be on the en-vi-ron-ment vari- Underfull \hbox (badness 1668) in paragraph at lines 4207--4223 \T1/ptm/m/n/10 able []\T1/zi4/m/sl/10 CURL_CA_BUNDLE []\T1/ptm/m/n/10 must be s et to a path to a cer-tifi-cate bun-dle file, usu-ally named [2177] [2178] Underfull \hbox (badness 10000) in paragraph at lines 4357--4359 []\T1/ptm/m/n/10 additional ar-gu-ments to be passed to [][][]\T1/zi4/m/sl/10 d ownload.file[][][] []\T1/ptm/m/n/10 and [2179] [2180] [2181] [2182] [2183] [2184] [2185] [2186] [2187] [2188] [2189] [2190] [2191] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.format}) has been already used, duplicate ignored \relax l.5136 ...mat Unordered and Ordered Lists}{format} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.format.1} ) has been already used, duplicate ignored \relax l.5136 ...mat Unordered and Ordered Lists}{format} [2192] [2193] [2194] [2195] [2196] [2197] [2198] [2199] Underfull \hbox (badness 1622) in paragraph at lines 5659--5663 []\T1/ptm/m/n/10 This func-tion will search for Win-dows han-dles, for pass-ing to ex-ter-nal GUIs or to the [2200] [2201] [2202] [2203] [2204] [2205] Underfull \hbox (badness 1448) in paragraph at lines 6044--6049 []\T1/ptm/m/n/10 External pointer ob-jects are com-pared as ref-er-ence ob-ject s, cor-re-spond-ing to call-ing [2206] [2207] [2208] [2209] [2210] [2211] [2212] [2213] Underfull \hbox (badness 1371) in paragraph at lines 6602--6604 []\T1/ptm/m/n/10 additional named ar-gu-ments such as []\T1/zi4/m/sl/10 method []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 ccaddress []\T1/ptm/m/n/10 to pass to [2214] [2215] Underfull \hbox (badness 1502) in paragraph at lines 6691--6697 []\T1/ptm/m/n/10 a char-ac-ter string to be matched in the help page `key-words '. `Key- Underfull \hbox (badness 2103) in paragraph at lines 6691--6697 \T1/ptm/m/n/10 words' are re-ally cat-e-gories: the stan-dard cat-e-gories are listed in file [2216] [2217] [2218] Underfull \hbox (badness 10000) in paragraph at lines 6871--6880 []\T1/ptm/m/n/10 One of the links on the in-dex page is the HTML pack-age in-de x, Underfull \hbox (badness 3354) in paragraph at lines 6871--6880 \T1/ptm/m/n/10 `\T1/ptm/m/sl/10 R_DOC_DIR\T1/zi4/m/sl/10 /html/packages.html\T1 /ptm/m/n/10 ', which can be re-made by [][][]\T1/zi4/m/sl/10 make.packages.html [][][]()[]\T1/ptm/m/n/10 . [2219] Underfull \hbox (badness 2150) in paragraph at lines 6933--6936 []\T1/ptm/m/n/10 a char-ac-ter vec-tor list-ing the types of doc-u-men-ta-tion to search. See [2220] [2221] Underfull \hbox (badness 3118) in paragraph at lines 7072--7074 []\T1/ptm/m/n/10 For de-tails of the lock-ing which is done, see the sec-tion ` Lock-ing' in the help for [2222] [2223] Underfull \hbox (badness 1325) in paragraph at lines 7250--7254 []\T1/ptm/m/n/10 a ma-trix as re-turned by [][][]\T1/zi4/m/sl/10 available.pack ages[][][] []\T1/ptm/m/n/10 list-ing pack-ages avail-able [2224] Underfull \hbox (badness 1424) in paragraph at lines 7343--7346 []\T1/ptm/m/n/10 logical: if true, re-duce the amount of out-put. This is \T1/p tm/m/it/10 not \T1/ptm/m/n/10 passed to [2225] Underfull \hbox (badness 3219) in paragraph at lines 7424--7431 []\T1/ptm/m/n/10 An al-ter-na-tive (and the cur-rent de-fault) is []\T1/zi4/m/s l/10 "both" []\T1/ptm/m/n/10 which means `use bi-nary if avail- Underfull \hbox (badness 5175) in paragraph at lines 7424--7431 \T1/ptm/m/n/10 able and cur-rent, oth-er-wise try source'. The ac-tion if there are source pack-ages Underfull \hbox (badness 1342) in paragraph at lines 7424--7431 \T1/ptm/m/n/10 which are pre-ferred but may con-tain code which needs to be com -piled is con-trolled by Underfull \hbox (badness 1596) in paragraph at lines 7424--7431 [][][]\T1/zi4/m/sl/10 getOption[][][]("install.packages.compile.from.source")[] \T1/ptm/m/n/10 . []\T1/zi4/m/sl/10 type = "both" []\T1/ptm/m/n/10 will be silen tly [2226] Underfull \hbox (badness 2932) in paragraph at lines 7432--7435 []\T1/ptm/m/n/10 Using pack-ages with []\T1/zi4/m/sl/10 type = "source" []\T1/p tm/m/n/10 al-ways works pro-vided the pack-age con-tains no [2227] Underfull \hbox (badness 1024) in paragraph at lines 7561--7564 []\T1/ptm/m/n/10 For other repos-i-to-ries, us-ing []\T1/zi4/m/sl/10 available. packages(filters = "OS_type")[\T1/ptm/m/sl/10 pkgname\T1/zi4/m/sl/10 , ] []\T1/ ptm/m/n/10 will [2228] Underfull \hbox (badness 10000) in paragraph at lines 7594--7599 [][][]\T1/zi4/m/sl/10 update.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/s l/10 available.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 download. packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 installed.packages[][][] []\T1/ptm/m/n/10 , Underfull \hbox (badness 5133) in paragraph at lines 7660--7664 []\T1/ptm/m/n/10 a char-ac-ter vec-tor giv-ing the fields to ex-tract from each pack-age's [2229] [2230] [2231] [2232] [2233] [2234] [2235] [2236] [2237] [2238] [2239] [2240] Underfull \hbox (badness 10000) in paragraph at lines 8327--8329 []\T1/ptm/m/n/10 typically the re-sult of []\T1/zi4/m/sl/10 methods(..)[]\T1/pt m/m/n/10 , an \T1/phv/m/n/10 R \T1/ptm/m/n/10 ob-ject of S3 class [2241] [2242] [2243] [2244] [2245] [2246] [2247] [2248] [2249] [2250] [2251] [2252] Underfull \hbox (badness 2310) in paragraph at lines 9114--9119 []\T1/ptm/m/n/10 If a `\T1/zi4/m/sl/10 DESCRIPTION\T1/ptm/m/n/10 ' file for the given pack-age is found and can suc-cess-fully be read, [2253] [2254] [2255] [2256] [2257] [2258] [2259] [2260] [2261] Underfull \hbox (badness 1248) in paragraph at lines 9691--9695 []\T1/zi4/m/sl/10 R CMD build []\T1/ptm/m/n/10 builds \T1/phv/m/n/10 R \T1/ptm/ m/n/10 source tar-balls. The name(s) of the pack-ages are taken from the [2262] [2263] Underfull \hbox (badness 1789) in paragraph at lines 9769--9771 []\T1/ptm/m/n/10 See `Writ-ing R Ex-ten-sions' and the `R for Win-dows FAQ' for more dis-cus-sion of the [2264] [2265] [2266] [2267] Underfull \hbox (badness 2600) in paragraph at lines 9993--9996 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the name of the help topic; de-faults to [2268] [2269] [2270] [2271] [2272] [2273] [2274] [2275] [2276] Underfull \hbox (badness 1097) in paragraph at lines 10630--10633 []\T1/ptm/m/n/10 The name []\T1/zi4/m/sl/10 "clipboard" []\T1/ptm/m/n/10 may al so be used on Win-dows, in which case [2277] [2278] Underfull \hbox (badness 3000) in paragraph at lines 10766--10771 [][][]\T1/zi4/m/sl/10 scan[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 type.c onvert[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 read.fwf[][][] []\T1/ptm/m /n/10 for read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/pt m/m/n/10 idth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][][]\T1/zi4/m/ sl/10 read.table[][][][]\T1/ptm/m/n/10 ; [2279] [2280] [2281] [2282] [2283] [2284] [2285] [2286] [2287] Underfull \hbox (badness 2134) in paragraph at lines 11361--11366 [][][]\T1/zi4/m/sl/10 scan[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 type.c onvert[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 read.fwf[][][] []\T1/ptm/m /n/10 for read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/pt m/m/n/10 idth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][][]\T1/zi4/m/ sl/10 write.table[][][][]\T1/ptm/m/n/10 ; [2288] Underfull \hbox (badness 10000) in paragraph at lines 11417--11422 []\T1/ptm/m/n/10 The `hive' con-tain-ing the key. The ab-bre-vi-a-tions are for Underfull \hbox (badness 10000) in paragraph at lines 11417--11422 []\T1/zi4/m/sl/10 HKEY_LOCAL_MACHINE[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 HKEY_C LASSES_ROOT[]\T1/ptm/m/n/10 . []\T1/zi4/m/sl/10 HKEY_CURRENT_USER[]\T1/ptm/m/n/ 10 , [2289] [2290] [2291] [2292] [2293] [2294] [2295] [2296] Underfull \hbox (badness 1824) in paragraph at lines 11915--11919 \T1/zi4/m/sl/10 / / en . wikipedia . org / w / index . php ? title = Roman _ nu merals & oldid = 1188781837$[][]\T1/ptm/m/n/10 . Ac-cessed [2297] [2298] [2299] [2300] [2301] [2302] [2303] Underfull \hbox (badness 4060) in paragraph at lines 12361--12364 []\T1/ptm/m/n/10 If `[]\T1/zi4/m/sl/10 --default-packages[]\T1/ptm/m/n/10 ' is not used, then []\T1/zi4/m/sl/10 Rscript []\T1/ptm/m/n/10 checks the en-vi-ron- ment vari-able Overfull \hbox (18.77168pt too wide) in paragraph at lines 12384--12384 []\T1/zi4/m/n/9 Rscript --default-packages=methods,datasets,utils,grDevices,gr aphics,stats -e \TS1/zi4/m/n/9 '\T1/zi4/m/n/9 sessionInfo()\TS1/zi4/m/n/9 '[] [2304] [2305] [2306] [2307] Underfull \hbox (badness 2150) in paragraph at lines 12639--12641 [][][]$\T1/zi4/m/sl/10 https : / / en . wikipedia . org / wiki / Ctags$[][]\T1/ ptm/m/n/10 , [][]$\T1/zi4/m/sl/10 https : / / www . gnu . org / software / emac s / manual / [2308] [2309] [2310] [2311] Underfull \hbox (badness 10000) in paragraph at lines 12859--12863 []\T1/ptm/m/n/10 The de-fault for []\T1/zi4/m/sl/10 stylepath []\T1/ptm/m/n/10 is now taken from the en-vi-ron-ment vari-able Underfull \hbox (badness 10000) in paragraph at lines 12892--12898 []\T1/ptm/m/n/10 If you wish to over-ride this de-fault be-hav-ior en-tirely, y ou can add a [2312] Underfull \hbox (badness 2762) in paragraph at lines 12907--12913 \T1/ptm/m/n/10 UTF-8 lo-cales (note that pdf-TeX as-sumes UTF-8 by de-fault sin ce 2018). Ei-ther set [2313] [2314] Underfull \hbox (badness 1009) in paragraph at lines 13082--13094 []\T1/ptm/m/n/10 Before each code chunk is eval-u-ated, zero or more hook func- tions can be ex-e-cuted. If Underfull \hbox (badness 4779) in paragraph at lines 13122--13124 []\T1/ptm/m/n/10 The file `\T1/zi4/m/sl/10 Rconsole\T1/ptm/m/n/10 ' con-fig-ure s the R GUI ([]\T1/zi4/m/sl/10 Rgui[]\T1/ptm/m/n/10 ) con-sole un-der MS Win-do ws and [2315] Underfull \hbox (badness 1077) in paragraph at lines 13152--13159 \T1/ptm/m/n/10 (strip-ping any trail-ing slash), oth-er-wise to the Win-dows `p er-sonal' di-rec-tory, oth-er-wise to [2316] [2317] [2318] [2319] [2320] [2321] Underfull \hbox (badness 3780) in paragraph at lines 13577--13583 []\T1/ptm/m/n/10 A Bio-con-duc-tor mir-ror can be se-lected by set-ting [][][]\ T1/zi4/m/sl/10 options[][][]("BioC_mirror")[]\T1/ptm/m/n/10 , e.g. via [2322] Underfull \hbox (badness 2635) in paragraph at lines 13595--13598 []\T1/ptm/m/n/10 Repository `[]\T1/zi4/m/sl/10 CRAN[]\T1/ptm/m/n/10 ' is treate d spe-cially: the value is taken from the cur-rent set-ting of [2323] [2324] [2325] Underfull \hbox (badness 2302) in paragraph at lines 13805--13807 []\T1/ptm/m/n/10 Convert file paths to the short form. 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one Output written on fullrefman.pdf (2486 pages, 6747710 bytes). Transcript written on fullrefman.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --pdf R-FAQ.texi This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-FAQ.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) [1{/var/lib/texmf/fonts/map/pdftex/u pdmap/pdftex.map}] [-1] Chapter 1 Chapter 2 [1] Cross reference values unknown; you must run TeX again. [2] Underfull \hbox (badness 10000) in paragraph at lines 255--284 @textrm and sparc @reducedrm CPU[]@textrm s (e.g., [][]@texttt https:// buildd . debian. org/ build. php? & pkg=r-base[][]@textrm ), [3] [4] [5] [6] Underfull \hbox (badness 10000) in paragraph at lines 612--617 @textrm (doi: [][]10.1080/10618600.1996.10474713 (@texttt https:// doi. org/ 10. 1080/ 10618600. 1996. [7] [8] [9] Chapter 3 [10] [11] [12] [13] [14] [15] [16] [17] Chapter 4 [18] Chapter 5 [19] [20] [21] Overfull \hbox (14.27353pt too wide) in paragraph at lines 1751--1751 []@smalltt KernSmooth Functions for Kernel Smoothing Supporting Wand & Jone s (1995)[] Overfull \hbox (14.27353pt too wide) in paragraph at lines 1752--1752 []@smalltt MASS Support Functions and Datasets for Venables and Riple y s MASS[] [22] [23] Chapter 6 [24] [25] Chapter 7 [26] [27] [28] [29] [30] [31] [32] [33] [34] [35] [36] [37] Writing index file R-FAQ.fn [38] Underfull \hbox (badness 10000) in paragraph at lines 3034--3048 @textrm and @texttt error.bars.by()[] @textrm func-tions in the [][]@textbf psy ch @textrm (@texttt https:// CRAN. R-project. org/ [39] [40] [41] Chapter 8 [42] Chapter 9 [43] [44] [45] (Acknowledgments) [46] [47] ) (see the transcript file for additional information) Output written on R-FAQ.pdf (49 pages, 351611 bytes). Transcript written on R-FAQ.log. This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-FAQ.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) [1{/var/lib/texmf/fonts/map/pdftex/u pdmap/pdftex.map}] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-FAQ.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-FAQ.toc [-1] [-2]) [-3] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-FAQ.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-FAQ.toc) Chapter 1 (/build/reproducible-path/r-base-4.5.0/doc/manual/R-FAQ.aux) Chapter 2 [1] [2] Underfull \hbox (badness 10000) in paragraph at lines 255--284 @textrm and sparc @reducedrm CPU[]@textrm s (e.g., [][]@texttt https:// buildd . debian. org/ build. php? & pkg=r-base[][]@textrm ), [3] [4] [5] [6] Underfull \hbox (badness 10000) in paragraph at lines 612--617 @textrm (doi: [][]10.1080/10618600.1996.10474713 (@texttt https:// doi. org/ 10. 1080/ 10618600. 1996. [7] [8] [9] Chapter 3 [10] [11] [12] [13] [14] [15] [16] [17] Chapter 4 [18] Chapter 5 [19] [20] [21] Overfull \hbox (14.27353pt too wide) in paragraph at lines 1751--1751 []@smalltt KernSmooth Functions for Kernel Smoothing Supporting Wand & Jone s (1995)[] Overfull \hbox (14.27353pt too wide) in paragraph at lines 1752--1752 []@smalltt MASS Support Functions and Datasets for Venables and Riple y s MASS[] [22] [23] Chapter 6 [24] [25] Chapter 7 [26] [27] [28] [29] [30] [31] [32] [33] [34] [35] [36] [37] Writing index file R-FAQ.fn [38] Underfull \hbox (badness 10000) in paragraph at lines 3034--3048 @textrm and @texttt error.bars.by()[] @textrm func-tions in the [][]@textbf psy ch @textrm (@texttt https:// CRAN. R-project. org/ [39] [40] [41] Chapter 8 [42] Chapter 9 [43] [44] [45] (Acknowledgments) [46] [47] ) (see the transcript file for additional information) Output written on R-FAQ.pdf (51 pages, 368707 bytes). Transcript written on R-FAQ.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --pdf R-admin.texi This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-admin.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-admin.vr (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (/build/reproducible-path/r-base-4.5.0/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] Chapter 1 Writing index file R-admin.cp Writing index file R-admin.en [1] Chapter 2 [2] Cross reference values unknown; you must run TeX again. [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] Chapter 3 [17] [18] [19] Chapter 4 [20] [21] [22] Chapter 5 [23] Chapter 6 [24] Overfull \hbox (14.94176pt too wide) in paragraph at lines 1880--1880 []@texttt [1] "datasets" "utils" "grDevices" "graphics" "stats" "met hods"[] [25] [26] Underfull \hbox (badness 6842) in paragraph at lines 2104--2112 []@texttt R CMD INSTALL[] @textrm works in Win-dows to in-stall source pack-age s. No ad-di- [27] Overfull \hbox (37.93651pt too wide) in paragraph at lines 2177--2177 []@texttt FLIBS = -L/Library/Frameworks/R.framework/Resources/lib -lgfortran - lquadmath[] [28] [29] [30] [31] [32] [33] Overfull \hbox (20.69044pt too wide) in paragraph at lines 2629--2629 []@texttt R --arch @textttsl arch @texttt CMD check -l @textttsl libdir @textt t --extra-arch --install=check:@textttsl pkg@texttt .log @textttsl pkg[] Chapter 7 [34] [35] [36] Chapter 8 [37] Chapter 9 [38] [39] [40] Appendix A [41] [42] Overfull \hbox (49.43388pt too wide) in paragraph at lines 3200--3200 []@texttt ./configure --enable-utf --enable-unicode-properties --enable-jit -- disable-cpp[] [43] [44] [45] Underfull \hbox (badness 10000) in paragraph at lines 3423--3425 []@textrm Library @texttt libdeflate[] @textrm ([][]@texttt https:// github. com/ ebiggers/ libdeflate[][]@textrm ) is used by [46] Overfull \hbox (14.94176pt too wide) in paragraph at lines 3519--3519 []@texttt JAVA_HOME=/usr/lib/jvm/java-1.8.0-openjdk-1.8.0.322.b06-6.fc34.x86_6 4/jre[] [47] [48] [49] [50] [51] [52] [53] [54] Underfull \hbox (badness 10000) in paragraph at lines 4160--4163 []@textrm There is also `Re-cur-sive-LA-PACK' ([][]@texttt https:// github. c om/ HPAC/ ReLAPACK? [55] Appendix B [56] [57] [58] [59] [60] [61] Appendix C [62] [63] [64] [65] Overfull \hbox (14.94176pt too wide) in paragraph at lines 4889--4889 []@texttt -Werror=format-security -Wp,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSER TIONS[] [66] [67] Overfull \hbox (26.43913pt too wide) in paragraph at lines 5083--5083 []@texttt !DEC$ ATTRIBUTES DLLEXPORT,C,REFERENCE,ALIAS: kdenestmlcvb :: kdenestmlcvb[] [68] Overfull \hbox (122.85329pt too wide) in paragraph at lines 5172--5172 []@texttt curl -OL https://mac.r-project.org/bin/darwin20/arm64/pcre2-10.44-da rwin.20-arm64.tar.xz[] Overfull \hbox (105.60722pt too wide) in paragraph at lines 5174--5174 []@texttt curl -OL https://mac.r-project.org/bin/darwin20/arm64/xz-5.6.3-darwi n.20-arm64.tar.xz[] [69] Overfull \hbox (60.93126pt too wide) in paragraph at lines 5302--5302 []@texttt curl -OL https://mac.r-project.org/tools/subversion-1.14.3-darwin.20 -arm64.tar.gz[] [70] Overfull \hbox (32.18782pt too wide) in paragraph at lines 5309--5309 []@texttt curl -OL https://mac.r-project.org/tools/subversion-1.14.3-darwin15. 6.tar.gz[] Overfull \hbox (170.15633pt too wide) in paragraph at lines 5339--5339 [] @texttt could not create compact unwind for _arcoef_: registers 23 and 24 not saved contiguously in frame[] Overfull \hbox (38.79282pt too wide) in paragraph at lines 5348--5349 [][][]@smallrm See [][]@smalltt https:// developer. apple. com/ documentati on/ xcode/ notarizing_macos_software_before_distribution[][]@smallrm .| [71] [72] [73] Overfull \hbox (72.77429pt too wide) in paragraph at lines 5613--5613 [][][][][]@smalltt https:// cran. r-project. org/ bin/ macosx/ RMacOSX-FA Q. html# Which-BLAS-is-used-and-how-can-it-be-changed_003f[][]| [74] Overfull \hbox (9.18199pt too wide) in paragraph at lines 1--5650 @texttt OpenMathLib/ OpenBLAS/ releases[][]@textrm ) by sym-link-ing @texttt /opt/OpenBLAS/lib/libopenblas.dylib[] [75] Underfull \hbox (badness 10000) in paragraph at lines 5726--5737 @texttt zulu-community/ ? os=macos& architecture=arm-64-bit& package=jdk[][ ] @textrm and from [76] [77] Overfull \hbox (48.12035pt too wide) in paragraph at lines 5886--5886 []@texttt /opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/14.2.0/libgfortran.5. dylib \[] Overfull \hbox (48.12035pt too wide) in paragraph at lines 5891--5891 []@texttt /opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/14.2.0/libquadmath.0. dylib \[] Overfull \hbox (25.1256pt too wide) in paragraph at lines 5909--5909 []@texttt PKG_LIBS = /usr/local/llvm/lib/libc++.a /usr/local/llvm/lib/libc++ab i.a[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 5932--5932 []@texttt FC="/opt//gfortran/bin/gfortran -arch x86_64 -mtune=native -mmacosx- version-min=11"[] [78] [79] (Function and variable index) [80] No file R-admin.vrs. (Environment variable index) [81] No file R-admin.ens. (Concept index) [82] No file R-admin.cps. [83] ) (see the transcript file for additional information) pdfTeX warning (dest): name{\040Tcl/Tk\040headers\040and\040libraries} has been referenced but does not exist, replaced by a fixed one Output written on R-admin.pdf (86 pages, 477370 bytes). Transcript written on R-admin.log. This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-admin.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-admin.vr (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (/build/reproducible-path/r-base-4.5.0/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-admin.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-admin.toc [-1] [-2]) [-3] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-admin.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-admin.toc) Chapter 1 (/build/reproducible-path/r-base-4.5.0/doc/manual/R-admin.aux) Writing index file R-admin.cp Writing index file R-admin.en [1] Chapter 2 [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] Chapter 3 [17] [18] [19] Chapter 4 [20] [21] [22] Chapter 5 [23] Chapter 6 [24] Overfull \hbox (14.94176pt too wide) in paragraph at lines 1880--1880 []@texttt [1] "datasets" "utils" "grDevices" "graphics" "stats" "met hods"[] [25] [26] Underfull \hbox (badness 6842) in paragraph at lines 2104--2112 []@texttt R CMD INSTALL[] @textrm works in Win-dows to in-stall source pack-age s. No ad-di- [27] Overfull \hbox (37.93651pt too wide) in paragraph at lines 2177--2177 []@texttt FLIBS = -L/Library/Frameworks/R.framework/Resources/lib -lgfortran - lquadmath[] [28] [29] [30] [31] [32] [33] Overfull \hbox (20.69044pt too wide) in paragraph at lines 2629--2629 []@texttt R --arch @textttsl arch @texttt CMD check -l @textttsl libdir @textt t --extra-arch --install=check:@textttsl pkg@texttt .log @textttsl pkg[] Chapter 7 [34] [35] [36] Chapter 8 [37] Chapter 9 [38] [39] [40] Appendix A [41] [42] Overfull \hbox (49.43388pt too wide) in paragraph at lines 3200--3200 []@texttt ./configure --enable-utf --enable-unicode-properties --enable-jit -- disable-cpp[] [43] [44] [45] Underfull \hbox (badness 10000) in paragraph at lines 3423--3425 []@textrm Library @texttt libdeflate[] @textrm ([][]@texttt https:// github. com/ ebiggers/ libdeflate[][]@textrm ) is used by [46] Overfull \hbox (14.94176pt too wide) in paragraph at lines 3519--3519 []@texttt JAVA_HOME=/usr/lib/jvm/java-1.8.0-openjdk-1.8.0.322.b06-6.fc34.x86_6 4/jre[] [47] [48] [49] [50] [51] [52] [53] [54] Underfull \hbox (badness 10000) in paragraph at lines 4160--4163 []@textrm There is also `Re-cur-sive-LA-PACK' ([][]@texttt https:// github. c om/ HPAC/ ReLAPACK? [55] Appendix B [56] [57] [58] [59] [60] [61] Appendix C [62] [63] [64] [65] Overfull \hbox (14.94176pt too wide) in paragraph at lines 4889--4889 []@texttt -Werror=format-security -Wp,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSER TIONS[] [66] [67] Overfull \hbox (26.43913pt too wide) in paragraph at lines 5083--5083 []@texttt !DEC$ ATTRIBUTES DLLEXPORT,C,REFERENCE,ALIAS: kdenestmlcvb :: kdenestmlcvb[] [68] Overfull \hbox (122.85329pt too wide) in paragraph at lines 5172--5172 []@texttt curl -OL https://mac.r-project.org/bin/darwin20/arm64/pcre2-10.44-da rwin.20-arm64.tar.xz[] Overfull \hbox (105.60722pt too wide) in paragraph at lines 5174--5174 []@texttt curl -OL https://mac.r-project.org/bin/darwin20/arm64/xz-5.6.3-darwi n.20-arm64.tar.xz[] l.5228: Undefined cross reference ` Tcl/Tk headers and libraries-snt'. l.5228: Undefined cross reference ` Tcl/Tk headers and libraries-snt'. l.5228: Undefined cross reference ` Tcl/Tk headers and libraries-pg'. [69] Overfull \hbox (60.93126pt too wide) in paragraph at lines 5302--5302 []@texttt curl -OL https://mac.r-project.org/tools/subversion-1.14.3-darwin.20 -arm64.tar.gz[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 5309--5309 []@texttt curl -OL https://mac.r-project.org/tools/subversion-1.14.3-darwin15. 6.tar.gz[] [70] Overfull \hbox (170.15633pt too wide) in paragraph at lines 5339--5339 [] @texttt could not create compact unwind for _arcoef_: registers 23 and 24 not saved contiguously in frame[] Overfull \hbox (38.79282pt too wide) in paragraph at lines 5348--5349 [][][]@smallrm See [][]@smalltt https:// developer. apple. com/ documentati on/ xcode/ notarizing_macos_software_before_distribution[][]@smallrm .| [71] [72] [73] Overfull \hbox (72.77429pt too wide) in paragraph at lines 5613--5613 [][][][][]@smalltt https:// cran. r-project. org/ bin/ macosx/ RMacOSX-FA Q. html# Which-BLAS-is-used-and-how-can-it-be-changed_003f[][]| [74] Overfull \hbox (9.18199pt too wide) in paragraph at lines 1--5650 @texttt OpenMathLib/ OpenBLAS/ releases[][]@textrm ) by sym-link-ing @texttt /opt/OpenBLAS/lib/libopenblas.dylib[] [75] Underfull \hbox (badness 10000) in paragraph at lines 5726--5737 @texttt zulu-community/ ? os=macos& architecture=arm-64-bit& package=jdk[][ ] @textrm and from [76] [77] Overfull \hbox (48.12035pt too wide) in paragraph at lines 5886--5886 []@texttt /opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/14.2.0/libgfortran.5. dylib \[] Overfull \hbox (48.12035pt too wide) in paragraph at lines 5891--5891 []@texttt /opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/14.2.0/libquadmath.0. dylib \[] Overfull \hbox (25.1256pt too wide) in paragraph at lines 5909--5909 []@texttt PKG_LIBS = /usr/local/llvm/lib/libc++.a /usr/local/llvm/lib/libc++ab i.a[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 5932--5932 []@texttt FC="/opt//gfortran/bin/gfortran -arch x86_64 -mtune=native -mmacosx- version-min=11"[] [78] [79] (Function and variable index) [80] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-admin.vrs) (Environment variable index) [81] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-admin.ens) (Concept index) [82] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-admin.cps) [83] ) (see the transcript file for additional information) pdfTeX warning (dest): name{\040Tcl/Tk\040headers\040and\040libraries} has been referenced but does not exist, replaced by a fixed one Output written on R-admin.pdf (88 pages, 520179 bytes). Transcript written on R-admin.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --pdf R-data.texi This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-data.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-data.vr (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (/build/reproducible-path/r-base-4.5.0/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] (Acknowledgements) [1] Chapter 1 [2] Writing index file R-data.cp Cross reference values unknown; you must run TeX again. [3] [4] [5] Underfull \hbox (badness 10000) in paragraph at lines 425--428 []@textrm Function @texttt write.matrix[] @textrm in pack-age [][]@textbf MASS @textrm (@texttt https:// CRAN. R-project. org/ Underfull \hbox (badness 10000) in paragraph at lines 436--440 []@textrm Function @texttt write.foreign[] @textrm in pack-age [][]@textbf fore ign @textrm (@texttt https:// CRAN. R-project. org/ [6] Chapter 2 [7] [8] [9] [10] [11] [12] [13] Chapter 3 [14] [15] Chapter 4 [16] Underfull \hbox (badness 10000) in paragraph at lines 1203--1215 @textrm (@texttt https:// www. ibm. com/ products/ informix[]@textrm )[]; [][]Oracle (@texttt https:// www. oracle. com[]@textrm )[]; [17] [18] [19] [20] [21] [22] Chapter 5 [23] Underfull \hbox (badness 10000) in paragraph at lines 1761--1767 []@textrm Packages [][]@textbf h5 @textrm (@texttt https:// CRAN. R-project. org/ package=h5[]@textrm )[], Bio-con-duc-tor's @textbf rhdf5@textrm , Chapter 6 [24] Chapter 7 [25] [26] [27] [28] [29] Chapter 8 [30] Chapter 9 [31] (References) [32] (Function and variable index) [33] No file R-data.vrs. (Concept index) [34] No file R-data.cps. [35] ) (see the transcript file for additional information) Output written on R-data.pdf (38 pages, 266610 bytes). Transcript written on R-data.log. This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-data.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-data.vr (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (/build/reproducible-path/r-base-4.5.0/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-data.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-data.toc [-1]) [-2] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-data.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-data.toc) (Acknowledgements) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-data.aux ) [1] Chapter 1 [2] Writing index file R-data.cp [3] [4] [5] Underfull \hbox (badness 10000) in paragraph at lines 425--428 []@textrm Function @texttt write.matrix[] @textrm in pack-age [][]@textbf MASS @textrm (@texttt https:// CRAN. R-project. org/ Underfull \hbox (badness 10000) in paragraph at lines 436--440 []@textrm Function @texttt write.foreign[] @textrm in pack-age [][]@textbf fore ign @textrm (@texttt https:// CRAN. R-project. org/ [6] Chapter 2 [7] [8] [9] [10] [11] [12] [13] Chapter 3 [14] [15] Chapter 4 [16] Underfull \hbox (badness 10000) in paragraph at lines 1203--1215 @textrm (@texttt https:// www. ibm. com/ products/ informix[]@textrm )[]; [][]Oracle (@texttt https:// www. oracle. com[]@textrm )[]; [17] [18] [19] [20] [21] [22] Chapter 5 [23] Underfull \hbox (badness 10000) in paragraph at lines 1761--1767 []@textrm Packages [][]@textbf h5 @textrm (@texttt https:// CRAN. R-project. org/ package=h5[]@textrm )[], Bio-con-duc-tor's @textbf rhdf5@textrm , Chapter 6 [24] Chapter 7 [25] [26] [27] [28] [29] Chapter 8 [30] Chapter 9 [31] (References) [32] (Function and variable index) [33] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-data.vrs [34]) (Concept index) [35] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-data.cps) [36] [37] ) (see the transcript file for additional information) Output written on R-data.pdf (41 pages, 302828 bytes). Transcript written on R-data.log. This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-data.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-data.vr (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (/build/reproducible-path/r-base-4.5.0/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-data.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-data.toc [-1]) [-2] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-data.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-data.toc) (Acknowledgements) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-data.aux ) [1] Chapter 1 [2] Writing index file R-data.cp [3] [4] [5] Underfull \hbox (badness 10000) in paragraph at lines 425--428 []@textrm Function @texttt write.matrix[] @textrm in pack-age [][]@textbf MASS @textrm (@texttt https:// CRAN. R-project. org/ Underfull \hbox (badness 10000) in paragraph at lines 436--440 []@textrm Function @texttt write.foreign[] @textrm in pack-age [][]@textbf fore ign @textrm (@texttt https:// CRAN. R-project. org/ [6] Chapter 2 [7] [8] [9] [10] [11] [12] [13] Chapter 3 [14] [15] Chapter 4 [16] Underfull \hbox (badness 10000) in paragraph at lines 1203--1215 @textrm (@texttt https:// www. ibm. com/ products/ informix[]@textrm )[]; [][]Oracle (@texttt https:// www. oracle. com[]@textrm )[]; [17] [18] [19] [20] [21] [22] Chapter 5 [23] Underfull \hbox (badness 10000) in paragraph at lines 1761--1767 []@textrm Packages [][]@textbf h5 @textrm (@texttt https:// CRAN. R-project. org/ package=h5[]@textrm )[], Bio-con-duc-tor's @textbf rhdf5@textrm , Chapter 6 [24] Chapter 7 [25] [26] [27] [28] [29] Chapter 8 [30] Chapter 9 [31] (References) [32] (Function and variable index) [33] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-data.vrs [34]) (Concept index) [35] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-data.cps) [36] [37] ) (see the transcript file for additional information) Output written on R-data.pdf (41 pages, 302838 bytes). Transcript written on R-data.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --pdf R-exts.texi This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-exts.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-exts.vr (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (/build/reproducible-path/r-base-4.5.0/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] (Acknowledgements) Chapter 1 [1] Writing index file R-exts.cp Cross reference values unknown; you must run TeX again. [2] [3] [4] [5] [6] Underfull \hbox (badness 10000) in paragraph at lines 513--516 []@textrm The `@texttt Depends[]@textrm '[], `@texttt Imports[]@textrm '[], `@t exttt Suggests[]@textrm '[], `@texttt Enhances[]@textrm '[], `@texttt LinkingTo []@textrm '[] and [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] Underfull \hbox (badness 10000) in paragraph at lines 1324--1325 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1325--1326 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1328--1330 @texttt R_MAKEVARS_USER[]@textrm , @texttt ~/.R/Makevars- Underfull \hbox (badness 10000) in paragraph at lines 1330--1332 @texttt ~/.R/Makevars.win64[]@textrm , Underfull \hbox (badness 10000) in paragraph at lines 1338--1339 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1339--1340 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1342--1344 @texttt R_MAKEVARS_USER[]@textrm , @texttt ~/.R/Makevars- Underfull \hbox (badness 10000) in paragraph at lines 1344--1346 @texttt ~/.R/Makevars.win64[]@textrm , [17] [18] [19] [20] Overfull \hbox (95.42339pt too wide) in paragraph at lines 1611--1611 [] @texttt "--no-libs", "--no-help", "--no-demo", "--no-exec" , "--no-test-load")[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 1612--1612 [] @texttt install.packages(pkg, lib, INSTALL_opts = opts, repos = NULL , quiet = TRUE)[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 1613--1613 [] @texttt res[z] <- file.size(file.path(lib, pkg_name, "data", "Rdata. rdb"))[] [21] Underfull \hbox (badness 10000) in paragraph at lines 1644--1651 @texttt org/ package=amap[]@textrm )[]), Python or Tcl ([][]@textbf Simile @te xtrm (@texttt https:// CRAN. R-project. org/ [22] [23] [24] [25] [26] Overfull \hbox (32.18782pt too wide) in paragraph at lines 2051--2051 []@texttt $ pkg-config --exists libtiff-4 >= 4.1.0 --print-errors # check the status[] [27] [28] [29] Overfull \hbox (14.94176pt too wide) in paragraph at lines 2276--2276 []@texttt SLAMC_FFLAGS=$(R_XTRA_FFLAGS) $(FPICFLAGS) $(SHLIB_FFLAGS) $(SAFE_FF LAGS)[] [30] [31] [32] [33] [34] Overfull \hbox (67.78206pt too wide) in paragraph at lines 2683--2683 []@smalltt SOURCES = $(wildcard data/*.cpp network/*.cpp utils/*.cpp model/*.c pp model/*/*.cpp model/*/*/*.cpp)[] Overfull \hbox (53.60722pt too wide) in paragraph at lines 2685--2685 []@smalltt OBJECTS = siena07utilities.o siena07internals.o siena07setup.o sien a07models.o $(SOURCES:.cpp=.o)[] [35] [36] Overfull \hbox (16.92342pt too wide) in paragraph at lines 2824--2824 []@smalltt dnl for 64-bit ODBC need SQL[U]LEN, and it is unclear where they ar e defined.[] [37] [38] [39] Underfull \hbox (badness 7221) in paragraph at lines 3020--3026 [][][]@smallrm See [][]@smalltt https:// isocpp. org/ std/ standing-documen ts/ sd-6-sg10-feature-test-recommendations[][] @smallrm or [40] Overfull \hbox (60.93126pt too wide) in paragraph at lines 3097--3097 [] @texttt CXX="$(CXX17) $(CXX17STD)" CXXFLAGS="$(CXX17FLAGS) $(CXX 17PICFLAGS)")[] [41] [42] [43] Overfull \hbox (43.6852pt too wide) in paragraph at lines 3334--3334 []@texttt if test -z "$CMAKE"; then CMAKE=/Applications/CMake.app/Contents/bin /cmake; fi[] [44] [45] [46] [47] [48] [49] [50] [51] [52] [53] [54] [55] [56] [57] [58] [59] [60] [61] Overfull \hbox (20.69044pt too wide) in paragraph at lines 4700--4700 []@texttt importFrom("stats", approx, optim, pchisq, predict, qchisq, qnorm, s pline)[] [62] [63] [64] Overfull \hbox (81.29893pt too wide) in paragraph at lines 4929--4929 [] @texttt CXX="$(CXX)" CXXFLAGS="$(CXXFLAGS) $(CXXPICFLAGS) $(C_VISIB ILITY)" \[] Overfull \hbox (59.61772pt too wide) in paragraph at lines 4948--4948 []@texttt CXXFLAGS = ^^R"${RBIN}" CMD config CXXFLAGS^^R ^^R"${RBIN}" CMD conf ig CXXPICFLAGS^^R[] [65] [66] [67] [68] [69] [70] Overfull \hbox (53.86903pt too wide) in paragraph at lines 5422--5422 []@texttt jv <- .jcall("java/lang/System", "S", "getProperty", "java.runtime.v ersion")[] Overfull \hbox (48.12035pt too wide) in paragraph at lines 5424--5424 [] @texttt jvn <- as.numeric(paste0(strsplit(jv, "[.]")[[1L]][1:2], collapse = "."))[] Overfull \hbox (65.36641pt too wide) in paragraph at lines 5425--5425 [] @texttt if(jvn < 1.8) stop("Java >= 8 is needed for this package but not a vailable")[] Overfull \hbox (76.86378pt too wide) in paragraph at lines 5440--5440 []@texttt java.lang.UnsupportedClassVersionError: ... Unsupported major.minor version 52.0[] [71] [72] [73] [74] [75] [76] Overfull \hbox (14.94176pt too wide) in paragraph at lines 5820--5820 []@texttt "latin1=en_US:latin2=pl_PL:UTF-8=en_US.UTF-8:latin9=fr_FR.iso885915@ euro"[] [77] [78] Underfull \hbox (badness 10000) in paragraph at lines 5987--5990 @texttt gcc/ C-Extensions. html[][] @textrm and [][]@texttt https:// gcc. gnu. org/ onlinedocs/ gcc/ [79] Overfull \hbox (19.3769pt too wide) in paragraph at lines 6073--6073 []@texttt abs acos atan bind calloc ceil div exp fabs floor fmod free log mall oc[] [80] [81] Overfull \hbox (53.86903pt too wide) in paragraph at lines 6218--6218 []@texttt register storage class specifier is deprecated and incompatible with C++17[] [82] Overfull \hbox (13.62822pt too wide) in paragraph at lines 6283--6283 []@texttt #if defined (__unix__) || (defined (__APPLE__) && defined (__MACH__) )[] [83] Overfull \hbox (48.12035pt too wide) in paragraph at lines 6360--6360 []@texttt !DEC$ ATTRIBUTES DLLEXPORT,C,REFERENCE,ALIAS: kdenestmlcvb :: kdenestmlcvb[] Overfull \hbox (25.1256pt too wide) in paragraph at lines 6372--6372 []@texttt warning: argument 1 value 18446744073709551615 exceeds maximum object[] Overfull \hbox (111.35591pt too wide) in paragraph at lines 6387--6387 [] @texttt Rf_error("Actual: %0.f; Expected %0.f\n", (double) XLENGTH(Robj) , (double) nelem);[] Writing index file R-exts.ap [84] Underfull \hbox (badness 10000) in paragraph at lines 6440--6441 [][][]@smallrm See [][]@smalltt https:// prereleases. llvm. org/ 11. 0. 0 / rc2/ tools/ clang/ docs/ ReleaseNotes. html# [85] [86] [87] [88] [89] [90] Overfull \hbox (19.3769pt too wide) in paragraph at lines 6931--6931 []@texttt #define dngettext(pkg, String, StringP, N) (N == 1 ? String : String P)[] [91] [92] Chapter 2 [93] [94] [95] [96] [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] Underfull \hbox (badness 10000) in paragraph at lines 8185--8192 []@textrm The two com-monly used sim-ple forms are @texttt \figure{@textttsl fi lename@texttt }[] @textrm and [107] [108] [109] Underfull \hbox (badness 10000) in paragraph at lines 8401--8406 []@texttt echo=FALSE[] @textrm Whether the R code should be echoed. If @texttt TRUE[] @textit and [110] [111] [112] Chapter 3 [113] [114] [115] [116] [117] [118] [119] Overfull \hbox (43.6852pt too wide) in paragraph at lines 9155--9155 []@texttt 5497 1.9783 R findVarLocInFrame.part.0. lto_priv.0[] [120] Chapter 4 [121] [122] [123] Overfull \hbox (14.94176pt too wide) in paragraph at lines 9422--9422 []@texttt evaluation nested too deeply: infinite recursion / options(expressio ns=)?[] [124] Overfull \hbox (25.25755pt too wide) in paragraph at lines 9463--9463 []@smalltt Message: Error: no valid set of coefficients has been found: pleas e supply starting values[] [125] Overfull \hbox (20.53261pt too wide) in paragraph at lines 9567--9567 []@smalltt debugging in: glm.fit(x = X, y = Y, weights = weights, start = star t, etastart = etastart,[] Overfull \hbox (38.96663pt too wide) in paragraph at lines 9597--9606 []@texttt debug[] @textrm can be used for hid-den func-tions and S3 meth-ods by e.g. @texttt debug(stats:::predict.Arima)[]@textrm . [126] [127] [128] [129] Underfull \hbox (badness 10000) in paragraph at lines 9858--9863 @smalltt developer. apple. com/ documentation/ xcode/ diagnosing-memory-th read-and-crash-issues-early[][]@smallrm . Underfull \hbox (badness 10000) in paragraph at lines 9856--9869 @texttt controlling-code-generation[][]@textrm , [][]@texttt https:// clang. llvm. org/ docs/ AddressSanitizer. Overfull \hbox (48.90796pt too wide) in paragraph at lines 9873--9874 [][][]@smallrm see [][]@smalltt https:// llvm. org/ devmtg/ 2014-04/ PDFs/ LightningTalks/ EuroLLVM%202014%20--%20container%20overflow. [130] [131] Overfull \hbox (78.17732pt too wide) in paragraph at lines 10022--10022 []@texttt setenv ASAN_OPTIONS alloc_dealloc_mismatch=0:detect_leaks=0:detect_odr_violation=0 [] Overfull \hbox (32.81921pt too wide) in paragraph at lines 10048--10051 [][]@smalltt https:// developer. apple. com/ documentation/ xcode/ diagno sing-memory-thread-and-crash-issues-early[][]@smallrm .| Overfull \hbox (33.15736pt too wide) in paragraph at lines 10061--10064 []@textrm This san-i-tizer may be com-bined with the Ad-dress San-i-tizer by @t exttt -fsanitize=undefined,address[] [132] [133] Underfull \hbox (badness 10000) in paragraph at lines 10160--10164 [][]@texttt https:// blog. llvm. org/ 2011/ 05/ what-every-c-programmer-s hould-know. html[][] Overfull \hbox (112.66945pt too wide) in paragraph at lines 10176--10176 []@texttt CC = clang -fsanitize=undefined -fno-sanitize=float-divide-by-zero - fno-omit-frame-pointer[] Overfull \hbox (170.15633pt too wide) in paragraph at lines 10177--10177 []@texttt CXX = clang++ -fsanitize=undefined -fno-sanitize=float-divide-by-zer o -fno-omit-frame-pointer -frtti[] Overfull \hbox (181.6537pt too wide) in paragraph at lines 10180--10180 []@texttt SAN_LIBS = $(UBSAN_DIR)/libclang_rt.ubsan_standalone.a $(UBSAN_DIR)/ libclang_rt.ubsan_standalone_cxx.a[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 10188--10188 []@texttt SAN_LIBS = -L$(UBSAN_DIR) -Wl,-rpath,$(UBSAN_DIR) -lclang_rt.ubsan_s tandalone[] Overfull \hbox (2.03816pt too wide) in paragraph at lines 10232--10236 []@textrm See [][]@texttt https:// gcc. gnu. org/ onlinedocs/ gcc-10. 1. 0/ gcc/ Static-Analyzer-Options. [134] Overfull \hbox (72.42863pt too wide) in paragraph at lines 10255--10255 []@texttt Fortran runtime error: Index 1 of dimension 1 of array x above upper bound of 0[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 10300--10300 [] @texttt 2: possibleExtends(class(sloti), classi, ClassDef2 = getClassDef(cl assi,[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 10303--10303 [] @texttt 4: stopifnot(validObject(cu <- as(tu, "dtCMatrix")), validObject(t( cu)),[] [135] [136] Overfull \hbox (26.43913pt too wide) in paragraph at lines 10382--10382 []@texttt #5 0xb7d6c0a5 in do_random2 (call=0x94bf7d4, op=0x92580e8, args=0x9 698f98,[] [137] [138] [139] Underfull \hbox (badness 10000) in paragraph at lines 10617--10619 [][][]@smallrm See [][]@smalltt https:// svn. r-project. org/ R-dev-web/ t runk/ CRAN/ QA/ Simon/ R-build/ fixpathR[][]@smallrm : [140] Overfull \hbox (124.16682pt too wide) in paragraph at lines 10673--10673 []@texttt boot.f:61: warning: type of ddot does not match original declaration [-Wlto-type-mismatch][] Overfull \hbox (147.16158pt too wide) in paragraph at lines 10692--10692 []@texttt rkpk2.f:77:5: warning: type of dstup does not match original declaration [-Wlto-type-mismatch][] Overfull \hbox (141.41289pt too wide) in paragraph at lines 10703--10703 []@texttt reg.f:78:33: warning: type of dqrdc does not match original declaration [-Wlto-type-mismatch][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 10723--10723 [] @tex ttt 1[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 10732--10732 [] @tex ttt 1[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 10733--10733 []@texttt Warning: Type mismatch in argument jpvt at (1); passed REAL(8) to INTEGER(4)[] [141] Chapter 5 [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] Overfull \hbox (30.87428pt too wide) in paragraph at lines 11535--11535 [] @texttt double *w, int *iper, double *span, double *al pha,[] Overfull \hbox (51.66371pt too wide) in paragraph at lines 11599--11599 []@smalltt y[accept] <- .Call("spline_value", knots, coeff, ord, x[accept], de riv, PACKAGE = "splines")[] [153] [154] Overfull \hbox (60.93126pt too wide) in paragraph at lines 11765--11765 [] @texttt na_omit_xts_func fun = (na_omit_xts_func) R_GetCCallable("xts", "n a_omit_xts");[] [155] [156] [157] [158] [159] [160] Overfull \hbox (37.93651pt too wide) in paragraph at lines 12205--12205 []@texttt PKG_LIBS=-L"$(PKGB_PATH)$(R_ARCH)" -Wl,-rpath,"$(PKGB_PATH)$(R_ARCH) " -lpackB[] [161] [162] [163] [164] [165] [166] [167] [168] [169] Writing index file R-exts.ae [170] [171] Overfull \hbox (32.18782pt too wide) in paragraph at lines 13098--13098 [] @texttt Rf_error("value is not a numeric vector with at least one el ement");[] [172] Overfull \hbox (32.18782pt too wide) in paragraph at lines 13167--13167 [] @texttt if(ign == NA_LOGICAL) Rf_error(" ignore_quotes must be TRUE or FALSE");[] [173] [174] Underfull \hbox (badness 7576) in paragraph at lines 13398--13406 []@textrm Some con-ve-nience func-tions for work-ing with pairlist ob-jects in- clude @texttt Rf_ [175] [176] [177] Overfull \hbox (49.43388pt too wide) in paragraph at lines 13678--13678 [] @texttt Rf_isNull(TAG(args)) ? "" : Rf_translateChar(PRINTNAME(T AG(args)));[] [178] [179] Overfull \hbox (20.69044pt too wide) in paragraph at lines 13846--13846 [] @texttt if(!Rf_isEnvironment(rho)) Rf_error(" rho should be an environment");[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 13874--13874 [] @texttt if(!Rf_isEnvironment(rho)) Rf_error(" rho should be an environment");[] [180] [181] Overfull \hbox (14.94176pt too wide) in paragraph at lines 13986--13986 [] @texttt // a version with (too) much PROTECT()ion .. "better safe than s orry"[] [182] [183] Overfull \hbox (32.18782pt too wide) in paragraph at lines 14110--14110 [] @texttt gradient = PROTECT(Rf_allocMatrix(REALSXP, LENGTH(ans), LENGTH(t heta)));[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 14117--14117 [] @texttt for(i = 0, start = 0; i < LENGTH(theta); i++, start += LENGTH(an s)) {[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 14118--14118 [] @texttt par = PROTECT(Rf_findVar(Rf_installChar(STRING_ELT(theta, i) ), rho));[] [184] Overfull \hbox (32.18782pt too wide) in paragraph at lines 14172--14172 [] @texttt gradient = PROTECT(Rf_allocMatrix(REALSXP, LENGTH(ans), LENGTH(t heta)));[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 14185--14185 [] @texttt for(i = 0, start = 0; i < LENGTH(theta); i++, start += LENGTH(an s)) {[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 14186--14186 [] @texttt par = PROTECT(Rf_findVar(Rf_installChar(STRING_ELT(theta, i) ), rho));[] [185] Overfull \hbox (26.43913pt too wide) in paragraph at lines 14286--14286 [] @texttt cmdexpr = PROTECT(R_ParseVector(cmdSexp, -1, &status, R_NilV alue));[] [186] [187] [188] Overfull \hbox (14.94176pt too wide) in paragraph at lines 14461--14461 []@texttt void R_RegisterCFinalizerEx(SEXP s, R_CFinalizer_t fun, Rboolean one xit);[] [189] Overfull \hbox (60.93126pt too wide) in paragraph at lines 14553--14553 [] @texttt ptr = R_MakeExternalPtr(thisHandle, Rf_install("RODBC_channel"), R_NilValue);[] [190] Overfull \hbox (72.42863pt too wide) in paragraph at lines 14679--14679 []@texttt typedef enum {CE_NATIVE, CE_UTF8, CE_LATIN1, CE_BYTES, CE_SYMBOL, CE _ANY} cetype_t;[] [191] [192] Chapter 6 [193] [194] [195] [196] Writing index file R-exts.for [197] [198] [199] [200] [201] [202] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15677--15677 [] @texttt call cmsg(msg//c_null_char) ! need to concatenate a nul term inator[] Underfull \hbox (badness 10000) in paragraph at lines 15695--15700 @texttt com/ content/ www/ us/ en/ docs/ fortran-compiler/ developer-gui de-reference/ [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] Underfull \hbox (badness 10000) in paragraph at lines 16506--16510 []@texttt R_orderVector()[] @textrm cor-re-sponds to R's @texttt order(..., na .last, decreasing)[]@textrm . [213] [214] [215] Overfull \hbox (14.94176pt too wide) in paragraph at lines 16734--16734 [] @texttt SEXP (*hndlr)(SEXP cond, void *hdata), void *hd ata);[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 16741--16741 [] @texttt SEXP (*hndlr)(SEXP cond, void *hdata) , void *hdata)[] Overfull \hbox (26.43913pt too wide) in paragraph at lines 16770--16770 [] @texttt void (*clean)(void *data, Rboolean jump), void *cdata,[] [216] [217] [218] [219] [220] [221] [222] [223] [224] [225] [226] Chapter 7 [227] [228] Chapter 8 [229] [230] Writing index file R-exts.em [231] Overfull \hbox (43.6852pt too wide) in paragraph at lines 17964--17964 []@texttt ## replace $(LIBR) $(LIBS) by $(STATIC_LIBR) if R was built with a s tatic libR[] [232] Overfull \hbox (20.69044pt too wide) in paragraph at lines 18007--18007 []@texttt extern int (*ptr_R_ReadConsole)(const char *, unsigned char *, int, int);[] Overfull \hbox (55.18257pt too wide) in paragraph at lines 18022--18022 []@texttt extern int (*ptr_R_EditFiles)(int, const char **, const char **, co nst char *);[] [233] [234] [235] [236] [237] [238] [239] [240] [241] (Function and variable index) [242] No file R-exts.vrs. (API index) [243] No file R-exts.aps. (Fortran API index) [244] No file R-exts.fors. (Experimental API index) [245] No file R-exts.aes. (Embedding API index) [246] No file R-exts.ems. (Concept index) [247] No file R-exts.cps. [248] ) (see the transcript file for additional information) Output written on R-exts.pdf (251 pages, 1034530 bytes). Transcript written on R-exts.log. This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-exts.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-exts.vr (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (/build/reproducible-path/r-base-4.5.0/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.toc [-1] [-2] [-3] [-4]) [-5] [-6] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.toc) (Acknowledgements) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.aux ) Chapter 1 [1] Writing index file R-exts.cp [2] [3] [4] [5] [6] Underfull \hbox (badness 10000) in paragraph at lines 513--516 []@textrm The `@texttt Depends[]@textrm '[], `@texttt Imports[]@textrm '[], `@t exttt Suggests[]@textrm '[], `@texttt Enhances[]@textrm '[], `@texttt LinkingTo []@textrm '[] and [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] Underfull \hbox (badness 10000) in paragraph at lines 1324--1325 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1325--1326 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1328--1330 @texttt R_MAKEVARS_USER[]@textrm , @texttt ~/.R/Makevars- Underfull \hbox (badness 10000) in paragraph at lines 1330--1332 @texttt ~/.R/Makevars.win64[]@textrm , Underfull \hbox (badness 10000) in paragraph at lines 1338--1339 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1339--1340 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1342--1344 @texttt R_MAKEVARS_USER[]@textrm , @texttt ~/.R/Makevars- Underfull \hbox (badness 10000) in paragraph at lines 1344--1346 @texttt ~/.R/Makevars.win64[]@textrm , [17] [18] [19] [20] Overfull \hbox (95.42339pt too wide) in paragraph at lines 1611--1611 [] @texttt "--no-libs", "--no-help", "--no-demo", "--no-exec" , "--no-test-load")[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 1612--1612 [] @texttt install.packages(pkg, lib, INSTALL_opts = opts, repos = NULL , quiet = TRUE)[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 1613--1613 [] @texttt res[z] <- file.size(file.path(lib, pkg_name, "data", "Rdata. rdb"))[] [21] Underfull \hbox (badness 10000) in paragraph at lines 1644--1651 @texttt org/ package=amap[]@textrm )[]), Python or Tcl ([][]@textbf Simile @te xtrm (@texttt https:// CRAN. R-project. org/ [22] [23] [24] [25] [26] Overfull \hbox (32.18782pt too wide) in paragraph at lines 2051--2051 []@texttt $ pkg-config --exists libtiff-4 >= 4.1.0 --print-errors # check the status[] [27] [28] [29] Overfull \hbox (14.94176pt too wide) in paragraph at lines 2276--2276 []@texttt SLAMC_FFLAGS=$(R_XTRA_FFLAGS) $(FPICFLAGS) $(SHLIB_FFLAGS) $(SAFE_FF LAGS)[] [30] [31] [32] [33] [34] Overfull \hbox (67.78206pt too wide) in paragraph at lines 2683--2683 []@smalltt SOURCES = $(wildcard data/*.cpp network/*.cpp utils/*.cpp model/*.c pp model/*/*.cpp model/*/*/*.cpp)[] Overfull \hbox (53.60722pt too wide) in paragraph at lines 2685--2685 []@smalltt OBJECTS = siena07utilities.o siena07internals.o siena07setup.o sien a07models.o $(SOURCES:.cpp=.o)[] [35] [36] Overfull \hbox (16.92342pt too wide) in paragraph at lines 2824--2824 []@smalltt dnl for 64-bit ODBC need SQL[U]LEN, and it is unclear where they ar e defined.[] [37] [38] [39] Underfull \hbox (badness 7221) in paragraph at lines 3020--3026 [][][]@smallrm See [][]@smalltt https:// isocpp. org/ std/ standing-documen ts/ sd-6-sg10-feature-test-recommendations[][] @smallrm or [40] Overfull \hbox (60.93126pt too wide) in paragraph at lines 3097--3097 [] @texttt CXX="$(CXX17) $(CXX17STD)" CXXFLAGS="$(CXX17FLAGS) $(CXX 17PICFLAGS)")[] [41] [42] [43] Overfull \hbox (43.6852pt too wide) in paragraph at lines 3334--3334 []@texttt if test -z "$CMAKE"; then CMAKE=/Applications/CMake.app/Contents/bin /cmake; fi[] [44] [45] [46] [47] [48] [49] [50] [51] [52] [53] [54] [55] [56] [57] [58] [59] [60] [61] Overfull \hbox (20.69044pt too wide) in paragraph at lines 4700--4700 []@texttt importFrom("stats", approx, optim, pchisq, predict, qchisq, qnorm, s pline)[] [62] [63] [64] Overfull \hbox (81.29893pt too wide) in paragraph at lines 4929--4929 [] @texttt CXX="$(CXX)" CXXFLAGS="$(CXXFLAGS) $(CXXPICFLAGS) $(C_VISIB ILITY)" \[] Overfull \hbox (59.61772pt too wide) in paragraph at lines 4948--4948 []@texttt CXXFLAGS = ^^R"${RBIN}" CMD config CXXFLAGS^^R ^^R"${RBIN}" CMD conf ig CXXPICFLAGS^^R[] [65] [66] [67] [68] [69] [70] Overfull \hbox (53.86903pt too wide) in paragraph at lines 5422--5422 []@texttt jv <- .jcall("java/lang/System", "S", "getProperty", "java.runtime.v ersion")[] Overfull \hbox (48.12035pt too wide) in paragraph at lines 5424--5424 [] @texttt jvn <- as.numeric(paste0(strsplit(jv, "[.]")[[1L]][1:2], collapse = "."))[] Overfull \hbox (65.36641pt too wide) in paragraph at lines 5425--5425 [] @texttt if(jvn < 1.8) stop("Java >= 8 is needed for this package but not a vailable")[] Overfull \hbox (76.86378pt too wide) in paragraph at lines 5440--5440 []@texttt java.lang.UnsupportedClassVersionError: ... Unsupported major.minor version 52.0[] [71] [72] [73] [74] [75] [76] Overfull \hbox (14.94176pt too wide) in paragraph at lines 5820--5820 []@texttt "latin1=en_US:latin2=pl_PL:UTF-8=en_US.UTF-8:latin9=fr_FR.iso885915@ euro"[] [77] [78] Underfull \hbox (badness 10000) in paragraph at lines 5987--5990 @texttt gcc/ C-Extensions. html[][] @textrm and [][]@texttt https:// gcc. gnu. org/ onlinedocs/ gcc/ [79] Overfull \hbox (19.3769pt too wide) in paragraph at lines 6073--6073 []@texttt abs acos atan bind calloc ceil div exp fabs floor fmod free log mall oc[] [80] [81] Overfull \hbox (53.86903pt too wide) in paragraph at lines 6218--6218 []@texttt register storage class specifier is deprecated and incompatible with C++17[] [82] Overfull \hbox (13.62822pt too wide) in paragraph at lines 6283--6283 []@texttt #if defined (__unix__) || (defined (__APPLE__) && defined (__MACH__) )[] [83] Overfull \hbox (48.12035pt too wide) in paragraph at lines 6360--6360 []@texttt !DEC$ ATTRIBUTES DLLEXPORT,C,REFERENCE,ALIAS: kdenestmlcvb :: kdenestmlcvb[] Overfull \hbox (25.1256pt too wide) in paragraph at lines 6372--6372 []@texttt warning: argument 1 value 18446744073709551615 exceeds maximum object[] Overfull \hbox (111.35591pt too wide) in paragraph at lines 6387--6387 [] @texttt Rf_error("Actual: %0.f; Expected %0.f\n", (double) XLENGTH(Robj) , (double) nelem);[] Writing index file R-exts.ap [84] Underfull \hbox (badness 10000) in paragraph at lines 6440--6441 [][][]@smallrm See [][]@smalltt https:// prereleases. llvm. org/ 11. 0. 0 / rc2/ tools/ clang/ docs/ ReleaseNotes. html# [85] [86] [87] [88] [89] [90] Overfull \hbox (19.3769pt too wide) in paragraph at lines 6931--6931 []@texttt #define dngettext(pkg, String, StringP, N) (N == 1 ? String : String P)[] [91] [92] Chapter 2 [93] [94] [95] [96] [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] Underfull \hbox (badness 10000) in paragraph at lines 8185--8192 []@textrm The two com-monly used sim-ple forms are @texttt \figure{@textttsl fi lename@texttt }[] @textrm and [107] [108] [109] Underfull \hbox (badness 10000) in paragraph at lines 8401--8406 []@texttt echo=FALSE[] @textrm Whether the R code should be echoed. If @texttt TRUE[] @textit and [110] [111] [112] Chapter 3 [113] [114] [115] [116] [117] [118] [119] Overfull \hbox (43.6852pt too wide) in paragraph at lines 9155--9155 []@texttt 5497 1.9783 R findVarLocInFrame.part.0. lto_priv.0[] [120] Chapter 4 [121] [122] [123] Overfull \hbox (14.94176pt too wide) in paragraph at lines 9422--9422 []@texttt evaluation nested too deeply: infinite recursion / options(expressio ns=)?[] [124] Overfull \hbox (25.25755pt too wide) in paragraph at lines 9463--9463 []@smalltt Message: Error: no valid set of coefficients has been found: pleas e supply starting values[] [125] Overfull \hbox (20.53261pt too wide) in paragraph at lines 9567--9567 []@smalltt debugging in: glm.fit(x = X, y = Y, weights = weights, start = star t, etastart = etastart,[] Overfull \hbox (38.96663pt too wide) in paragraph at lines 9597--9606 []@texttt debug[] @textrm can be used for hid-den func-tions and S3 meth-ods by e.g. @texttt debug(stats:::predict.Arima)[]@textrm . [126] [127] [128] [129] Underfull \hbox (badness 10000) in paragraph at lines 9858--9863 @smalltt developer. apple. com/ documentation/ xcode/ diagnosing-memory-th read-and-crash-issues-early[][]@smallrm . Underfull \hbox (badness 10000) in paragraph at lines 9856--9869 @texttt controlling-code-generation[][]@textrm , [][]@texttt https:// clang. llvm. org/ docs/ AddressSanitizer. Overfull \hbox (48.90796pt too wide) in paragraph at lines 9873--9874 [][][]@smallrm see [][]@smalltt https:// llvm. org/ devmtg/ 2014-04/ PDFs/ LightningTalks/ EuroLLVM%202014%20--%20container%20overflow. [130] [131] Overfull \hbox (78.17732pt too wide) in paragraph at lines 10022--10022 []@texttt setenv ASAN_OPTIONS alloc_dealloc_mismatch=0:detect_leaks=0:detect_odr_violation=0 [] Overfull \hbox (32.81921pt too wide) in paragraph at lines 10048--10051 [][]@smalltt https:// developer. apple. com/ documentation/ xcode/ diagno sing-memory-thread-and-crash-issues-early[][]@smallrm .| Overfull \hbox (33.15736pt too wide) in paragraph at lines 10061--10064 []@textrm This san-i-tizer may be com-bined with the Ad-dress San-i-tizer by @t exttt -fsanitize=undefined,address[] [132] [133] Underfull \hbox (badness 10000) in paragraph at lines 10160--10164 [][]@texttt https:// blog. llvm. org/ 2011/ 05/ what-every-c-programmer-s hould-know. html[][] Overfull \hbox (112.66945pt too wide) in paragraph at lines 10176--10176 []@texttt CC = clang -fsanitize=undefined -fno-sanitize=float-divide-by-zero - fno-omit-frame-pointer[] Overfull \hbox (170.15633pt too wide) in paragraph at lines 10177--10177 []@texttt CXX = clang++ -fsanitize=undefined -fno-sanitize=float-divide-by-zer o -fno-omit-frame-pointer -frtti[] Overfull \hbox (181.6537pt too wide) in paragraph at lines 10180--10180 []@texttt SAN_LIBS = $(UBSAN_DIR)/libclang_rt.ubsan_standalone.a $(UBSAN_DIR)/ libclang_rt.ubsan_standalone_cxx.a[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 10188--10188 []@texttt SAN_LIBS = -L$(UBSAN_DIR) -Wl,-rpath,$(UBSAN_DIR) -lclang_rt.ubsan_s tandalone[] Overfull \hbox (2.03816pt too wide) in paragraph at lines 10232--10236 []@textrm See [][]@texttt https:// gcc. gnu. org/ onlinedocs/ gcc-10. 1. 0/ gcc/ Static-Analyzer-Options. [134] Overfull \hbox (72.42863pt too wide) in paragraph at lines 10255--10255 []@texttt Fortran runtime error: Index 1 of dimension 1 of array x above upper bound of 0[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 10300--10300 [] @texttt 2: possibleExtends(class(sloti), classi, ClassDef2 = getClassDef(cl assi,[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 10303--10303 [] @texttt 4: stopifnot(validObject(cu <- as(tu, "dtCMatrix")), validObject(t( cu)),[] [135] [136] Overfull \hbox (26.43913pt too wide) in paragraph at lines 10382--10382 []@texttt #5 0xb7d6c0a5 in do_random2 (call=0x94bf7d4, op=0x92580e8, args=0x9 698f98,[] [137] [138] [139] Underfull \hbox (badness 10000) in paragraph at lines 10617--10619 [][][]@smallrm See [][]@smalltt https:// svn. r-project. org/ R-dev-web/ t runk/ CRAN/ QA/ Simon/ R-build/ fixpathR[][]@smallrm : [140] Overfull \hbox (124.16682pt too wide) in paragraph at lines 10673--10673 []@texttt boot.f:61: warning: type of ddot does not match original declaration [-Wlto-type-mismatch][] Overfull \hbox (147.16158pt too wide) in paragraph at lines 10692--10692 []@texttt rkpk2.f:77:5: warning: type of dstup does not match original declaration [-Wlto-type-mismatch][] Overfull \hbox (141.41289pt too wide) in paragraph at lines 10703--10703 []@texttt reg.f:78:33: warning: type of dqrdc does not match original declaration [-Wlto-type-mismatch][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 10723--10723 [] @tex ttt 1[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 10732--10732 [] @tex ttt 1[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 10733--10733 []@texttt Warning: Type mismatch in argument jpvt at (1); passed REAL(8) to INTEGER(4)[] [141] Chapter 5 [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] Overfull \hbox (30.87428pt too wide) in paragraph at lines 11535--11535 [] @texttt double *w, int *iper, double *span, double *al pha,[] Overfull \hbox (51.66371pt too wide) in paragraph at lines 11599--11599 []@smalltt y[accept] <- .Call("spline_value", knots, coeff, ord, x[accept], de riv, PACKAGE = "splines")[] [153] [154] Overfull \hbox (60.93126pt too wide) in paragraph at lines 11765--11765 [] @texttt na_omit_xts_func fun = (na_omit_xts_func) R_GetCCallable("xts", "n a_omit_xts");[] [155] [156] [157] [158] [159] [160] Overfull \hbox (37.93651pt too wide) in paragraph at lines 12205--12205 []@texttt PKG_LIBS=-L"$(PKGB_PATH)$(R_ARCH)" -Wl,-rpath,"$(PKGB_PATH)$(R_ARCH) " -lpackB[] [161] [162] [163] [164] [165] [166] [167] [168] [169] Writing index file R-exts.ae [170] [171] Overfull \hbox (32.18782pt too wide) in paragraph at lines 13098--13098 [] @texttt Rf_error("value is not a numeric vector with at least one el ement");[] [172] Overfull \hbox (32.18782pt too wide) in paragraph at lines 13167--13167 [] @texttt if(ign == NA_LOGICAL) Rf_error(" ignore_quotes must be TRUE or FALSE");[] [173] [174] Underfull \hbox (badness 7576) in paragraph at lines 13398--13406 []@textrm Some con-ve-nience func-tions for work-ing with pairlist ob-jects in- clude @texttt Rf_ [175] [176] [177] Overfull \hbox (49.43388pt too wide) in paragraph at lines 13678--13678 [] @texttt Rf_isNull(TAG(args)) ? "" : Rf_translateChar(PRINTNAME(T AG(args)));[] [178] [179] Overfull \hbox (20.69044pt too wide) in paragraph at lines 13846--13846 [] @texttt if(!Rf_isEnvironment(rho)) Rf_error(" rho should be an environment");[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 13874--13874 [] @texttt if(!Rf_isEnvironment(rho)) Rf_error(" rho should be an environment");[] [180] [181] Overfull \hbox (14.94176pt too wide) in paragraph at lines 13986--13986 [] @texttt // a version with (too) much PROTECT()ion .. "better safe than s orry"[] [182] [183] Overfull \hbox (32.18782pt too wide) in paragraph at lines 14110--14110 [] @texttt gradient = PROTECT(Rf_allocMatrix(REALSXP, LENGTH(ans), LENGTH(t heta)));[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 14117--14117 [] @texttt for(i = 0, start = 0; i < LENGTH(theta); i++, start += LENGTH(an s)) {[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 14118--14118 [] @texttt par = PROTECT(Rf_findVar(Rf_installChar(STRING_ELT(theta, i) ), rho));[] [184] Overfull \hbox (32.18782pt too wide) in paragraph at lines 14172--14172 [] @texttt gradient = PROTECT(Rf_allocMatrix(REALSXP, LENGTH(ans), LENGTH(t heta)));[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 14185--14185 [] @texttt for(i = 0, start = 0; i < LENGTH(theta); i++, start += LENGTH(an s)) {[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 14186--14186 [] @texttt par = PROTECT(Rf_findVar(Rf_installChar(STRING_ELT(theta, i) ), rho));[] [185] Overfull \hbox (26.43913pt too wide) in paragraph at lines 14286--14286 [] @texttt cmdexpr = PROTECT(R_ParseVector(cmdSexp, -1, &status, R_NilV alue));[] [186] [187] [188] Overfull \hbox (14.94176pt too wide) in paragraph at lines 14461--14461 []@texttt void R_RegisterCFinalizerEx(SEXP s, R_CFinalizer_t fun, Rboolean one xit);[] [189] Overfull \hbox (60.93126pt too wide) in paragraph at lines 14553--14553 [] @texttt ptr = R_MakeExternalPtr(thisHandle, Rf_install("RODBC_channel"), R_NilValue);[] [190] Overfull \hbox (72.42863pt too wide) in paragraph at lines 14679--14679 []@texttt typedef enum {CE_NATIVE, CE_UTF8, CE_LATIN1, CE_BYTES, CE_SYMBOL, CE _ANY} cetype_t;[] [191] [192] Chapter 6 [193] [194] [195] [196] Writing index file R-exts.for [197] [198] [199] [200] [201] [202] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15677--15677 [] @texttt call cmsg(msg//c_null_char) ! need to concatenate a nul term inator[] Underfull \hbox (badness 10000) in paragraph at lines 15695--15700 @texttt com/ content/ www/ us/ en/ docs/ fortran-compiler/ developer-gui de-reference/ [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] Underfull \hbox (badness 10000) in paragraph at lines 16506--16510 []@texttt R_orderVector()[] @textrm cor-re-sponds to R's @texttt order(..., na .last, decreasing)[]@textrm . [213] [214] [215] Overfull \hbox (14.94176pt too wide) in paragraph at lines 16734--16734 [] @texttt SEXP (*hndlr)(SEXP cond, void *hdata), void *hd ata);[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 16741--16741 [] @texttt SEXP (*hndlr)(SEXP cond, void *hdata) , void *hdata)[] Overfull \hbox (26.43913pt too wide) in paragraph at lines 16770--16770 [] @texttt void (*clean)(void *data, Rboolean jump), void *cdata,[] [216] [217] [218] [219] [220] [221] [222] [223] [224] [225] [226] Chapter 7 [227] [228] Chapter 8 [229] [230] Writing index file R-exts.em [231] Overfull \hbox (43.6852pt too wide) in paragraph at lines 17964--17964 []@texttt ## replace $(LIBR) $(LIBS) by $(STATIC_LIBR) if R was built with a s tatic libR[] [232] Overfull \hbox (20.69044pt too wide) in paragraph at lines 18007--18007 []@texttt extern int (*ptr_R_ReadConsole)(const char *, unsigned char *, int, int);[] Overfull \hbox (55.18257pt too wide) in paragraph at lines 18022--18022 []@texttt extern int (*ptr_R_EditFiles)(int, const char **, const char **, co nst char *);[] [233] [234] [235] [236] [237] [238] [239] [240] [241] (Function and variable index) [242] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.vrs [243] [244] [245] [246] [247] [248]) (API index) [249] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.aps [250] [251] [252]) (Fortran API index) [253] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.fors) (Experimental API index) [254] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.aes [255]) (Embedding API index) [256] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.ems) (Concept index) [257] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.cps [258]) [259] ) (see the transcript file for additional information) Output written on R-exts.pdf (267 pages, 1134748 bytes). Transcript written on R-exts.log. This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-exts.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-exts.vr (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (/build/reproducible-path/r-base-4.5.0/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.toc [-1] [-2] [-3] [-4]) [-5] [-6] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.toc) (Acknowledgements) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.aux ) Chapter 1 [1] Writing index file R-exts.cp [2] [3] [4] [5] [6] Underfull \hbox (badness 10000) in paragraph at lines 513--516 []@textrm The `@texttt Depends[]@textrm '[], `@texttt Imports[]@textrm '[], `@t exttt Suggests[]@textrm '[], `@texttt Enhances[]@textrm '[], `@texttt LinkingTo []@textrm '[] and [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] Underfull \hbox (badness 10000) in paragraph at lines 1324--1325 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1325--1326 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1328--1330 @texttt R_MAKEVARS_USER[]@textrm , @texttt ~/.R/Makevars- Underfull \hbox (badness 10000) in paragraph at lines 1330--1332 @texttt ~/.R/Makevars.win64[]@textrm , Underfull \hbox (badness 10000) in paragraph at lines 1338--1339 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1339--1340 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1342--1344 @texttt R_MAKEVARS_USER[]@textrm , @texttt ~/.R/Makevars- Underfull \hbox (badness 10000) in paragraph at lines 1344--1346 @texttt ~/.R/Makevars.win64[]@textrm , [17] [18] [19] [20] Overfull \hbox (95.42339pt too wide) in paragraph at lines 1611--1611 [] @texttt "--no-libs", "--no-help", "--no-demo", "--no-exec" , "--no-test-load")[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 1612--1612 [] @texttt install.packages(pkg, lib, INSTALL_opts = opts, repos = NULL , quiet = TRUE)[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 1613--1613 [] @texttt res[z] <- file.size(file.path(lib, pkg_name, "data", "Rdata. rdb"))[] [21] Underfull \hbox (badness 10000) in paragraph at lines 1644--1651 @texttt org/ package=amap[]@textrm )[]), Python or Tcl ([][]@textbf Simile @te xtrm (@texttt https:// CRAN. R-project. org/ [22] [23] [24] [25] [26] Overfull \hbox (32.18782pt too wide) in paragraph at lines 2051--2051 []@texttt $ pkg-config --exists libtiff-4 >= 4.1.0 --print-errors # check the status[] [27] [28] [29] Overfull \hbox (14.94176pt too wide) in paragraph at lines 2276--2276 []@texttt SLAMC_FFLAGS=$(R_XTRA_FFLAGS) $(FPICFLAGS) $(SHLIB_FFLAGS) $(SAFE_FF LAGS)[] [30] [31] [32] [33] [34] Overfull \hbox (67.78206pt too wide) in paragraph at lines 2683--2683 []@smalltt SOURCES = $(wildcard data/*.cpp network/*.cpp utils/*.cpp model/*.c pp model/*/*.cpp model/*/*/*.cpp)[] Overfull \hbox (53.60722pt too wide) in paragraph at lines 2685--2685 []@smalltt OBJECTS = siena07utilities.o siena07internals.o siena07setup.o sien a07models.o $(SOURCES:.cpp=.o)[] [35] [36] Overfull \hbox (16.92342pt too wide) in paragraph at lines 2824--2824 []@smalltt dnl for 64-bit ODBC need SQL[U]LEN, and it is unclear where they ar e defined.[] [37] [38] [39] Underfull \hbox (badness 7221) in paragraph at lines 3020--3026 [][][]@smallrm See [][]@smalltt https:// isocpp. org/ std/ standing-documen ts/ sd-6-sg10-feature-test-recommendations[][] @smallrm or [40] Overfull \hbox (60.93126pt too wide) in paragraph at lines 3097--3097 [] @texttt CXX="$(CXX17) $(CXX17STD)" CXXFLAGS="$(CXX17FLAGS) $(CXX 17PICFLAGS)")[] [41] [42] [43] Overfull \hbox (43.6852pt too wide) in paragraph at lines 3334--3334 []@texttt if test -z "$CMAKE"; then CMAKE=/Applications/CMake.app/Contents/bin /cmake; fi[] [44] [45] [46] [47] [48] [49] [50] [51] [52] [53] [54] [55] [56] [57] [58] [59] [60] [61] Overfull \hbox (20.69044pt too wide) in paragraph at lines 4700--4700 []@texttt importFrom("stats", approx, optim, pchisq, predict, qchisq, qnorm, s pline)[] [62] [63] [64] Overfull \hbox (81.29893pt too wide) in paragraph at lines 4929--4929 [] @texttt CXX="$(CXX)" CXXFLAGS="$(CXXFLAGS) $(CXXPICFLAGS) $(C_VISIB ILITY)" \[] Overfull \hbox (59.61772pt too wide) in paragraph at lines 4948--4948 []@texttt CXXFLAGS = ^^R"${RBIN}" CMD config CXXFLAGS^^R ^^R"${RBIN}" CMD conf ig CXXPICFLAGS^^R[] [65] [66] [67] [68] [69] [70] Overfull \hbox (53.86903pt too wide) in paragraph at lines 5422--5422 []@texttt jv <- .jcall("java/lang/System", "S", "getProperty", "java.runtime.v ersion")[] Overfull \hbox (48.12035pt too wide) in paragraph at lines 5424--5424 [] @texttt jvn <- as.numeric(paste0(strsplit(jv, "[.]")[[1L]][1:2], collapse = "."))[] Overfull \hbox (65.36641pt too wide) in paragraph at lines 5425--5425 [] @texttt if(jvn < 1.8) stop("Java >= 8 is needed for this package but not a vailable")[] Overfull \hbox (76.86378pt too wide) in paragraph at lines 5440--5440 []@texttt java.lang.UnsupportedClassVersionError: ... Unsupported major.minor version 52.0[] [71] [72] [73] [74] [75] [76] Overfull \hbox (14.94176pt too wide) in paragraph at lines 5820--5820 []@texttt "latin1=en_US:latin2=pl_PL:UTF-8=en_US.UTF-8:latin9=fr_FR.iso885915@ euro"[] [77] [78] Underfull \hbox (badness 10000) in paragraph at lines 5987--5990 @texttt gcc/ C-Extensions. html[][] @textrm and [][]@texttt https:// gcc. gnu. org/ onlinedocs/ gcc/ [79] Overfull \hbox (19.3769pt too wide) in paragraph at lines 6073--6073 []@texttt abs acos atan bind calloc ceil div exp fabs floor fmod free log mall oc[] [80] [81] Overfull \hbox (53.86903pt too wide) in paragraph at lines 6218--6218 []@texttt register storage class specifier is deprecated and incompatible with C++17[] [82] Overfull \hbox (13.62822pt too wide) in paragraph at lines 6283--6283 []@texttt #if defined (__unix__) || (defined (__APPLE__) && defined (__MACH__) )[] [83] Overfull \hbox (48.12035pt too wide) in paragraph at lines 6360--6360 []@texttt !DEC$ ATTRIBUTES DLLEXPORT,C,REFERENCE,ALIAS: kdenestmlcvb :: kdenestmlcvb[] Overfull \hbox (25.1256pt too wide) in paragraph at lines 6372--6372 []@texttt warning: argument 1 value 18446744073709551615 exceeds maximum object[] Overfull \hbox (111.35591pt too wide) in paragraph at lines 6387--6387 [] @texttt Rf_error("Actual: %0.f; Expected %0.f\n", (double) XLENGTH(Robj) , (double) nelem);[] Writing index file R-exts.ap [84] Underfull \hbox (badness 10000) in paragraph at lines 6440--6441 [][][]@smallrm See [][]@smalltt https:// prereleases. llvm. org/ 11. 0. 0 / rc2/ tools/ clang/ docs/ ReleaseNotes. html# [85] [86] [87] [88] [89] [90] Overfull \hbox (19.3769pt too wide) in paragraph at lines 6931--6931 []@texttt #define dngettext(pkg, String, StringP, N) (N == 1 ? String : String P)[] [91] [92] Chapter 2 [93] [94] [95] [96] [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] Underfull \hbox (badness 10000) in paragraph at lines 8185--8192 []@textrm The two com-monly used sim-ple forms are @texttt \figure{@textttsl fi lename@texttt }[] @textrm and [107] [108] [109] Underfull \hbox (badness 10000) in paragraph at lines 8401--8406 []@texttt echo=FALSE[] @textrm Whether the R code should be echoed. If @texttt TRUE[] @textit and [110] [111] [112] Chapter 3 [113] [114] [115] [116] [117] [118] [119] Overfull \hbox (43.6852pt too wide) in paragraph at lines 9155--9155 []@texttt 5497 1.9783 R findVarLocInFrame.part.0. lto_priv.0[] [120] Chapter 4 [121] [122] [123] Overfull \hbox (14.94176pt too wide) in paragraph at lines 9422--9422 []@texttt evaluation nested too deeply: infinite recursion / options(expressio ns=)?[] [124] Overfull \hbox (25.25755pt too wide) in paragraph at lines 9463--9463 []@smalltt Message: Error: no valid set of coefficients has been found: pleas e supply starting values[] [125] Overfull \hbox (20.53261pt too wide) in paragraph at lines 9567--9567 []@smalltt debugging in: glm.fit(x = X, y = Y, weights = weights, start = star t, etastart = etastart,[] Overfull \hbox (38.96663pt too wide) in paragraph at lines 9597--9606 []@texttt debug[] @textrm can be used for hid-den func-tions and S3 meth-ods by e.g. @texttt debug(stats:::predict.Arima)[]@textrm . [126] [127] [128] [129] Underfull \hbox (badness 10000) in paragraph at lines 9858--9863 @smalltt developer. apple. com/ documentation/ xcode/ diagnosing-memory-th read-and-crash-issues-early[][]@smallrm . Underfull \hbox (badness 10000) in paragraph at lines 9856--9869 @texttt controlling-code-generation[][]@textrm , [][]@texttt https:// clang. llvm. org/ docs/ AddressSanitizer. Overfull \hbox (48.90796pt too wide) in paragraph at lines 9873--9874 [][][]@smallrm see [][]@smalltt https:// llvm. org/ devmtg/ 2014-04/ PDFs/ LightningTalks/ EuroLLVM%202014%20--%20container%20overflow. [130] [131] Overfull \hbox (78.17732pt too wide) in paragraph at lines 10022--10022 []@texttt setenv ASAN_OPTIONS alloc_dealloc_mismatch=0:detect_leaks=0:detect_odr_violation=0 [] Overfull \hbox (32.81921pt too wide) in paragraph at lines 10048--10051 [][]@smalltt https:// developer. apple. com/ documentation/ xcode/ diagno sing-memory-thread-and-crash-issues-early[][]@smallrm .| Overfull \hbox (33.15736pt too wide) in paragraph at lines 10061--10064 []@textrm This san-i-tizer may be com-bined with the Ad-dress San-i-tizer by @t exttt -fsanitize=undefined,address[] [132] [133] Underfull \hbox (badness 10000) in paragraph at lines 10160--10164 [][]@texttt https:// blog. llvm. org/ 2011/ 05/ what-every-c-programmer-s hould-know. html[][] Overfull \hbox (112.66945pt too wide) in paragraph at lines 10176--10176 []@texttt CC = clang -fsanitize=undefined -fno-sanitize=float-divide-by-zero - fno-omit-frame-pointer[] Overfull \hbox (170.15633pt too wide) in paragraph at lines 10177--10177 []@texttt CXX = clang++ -fsanitize=undefined -fno-sanitize=float-divide-by-zer o -fno-omit-frame-pointer -frtti[] Overfull \hbox (181.6537pt too wide) in paragraph at lines 10180--10180 []@texttt SAN_LIBS = $(UBSAN_DIR)/libclang_rt.ubsan_standalone.a $(UBSAN_DIR)/ libclang_rt.ubsan_standalone_cxx.a[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 10188--10188 []@texttt SAN_LIBS = -L$(UBSAN_DIR) -Wl,-rpath,$(UBSAN_DIR) -lclang_rt.ubsan_s tandalone[] Overfull \hbox (2.03816pt too wide) in paragraph at lines 10232--10236 []@textrm See [][]@texttt https:// gcc. gnu. org/ onlinedocs/ gcc-10. 1. 0/ gcc/ Static-Analyzer-Options. [134] Overfull \hbox (72.42863pt too wide) in paragraph at lines 10255--10255 []@texttt Fortran runtime error: Index 1 of dimension 1 of array x above upper bound of 0[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 10300--10300 [] @texttt 2: possibleExtends(class(sloti), classi, ClassDef2 = getClassDef(cl assi,[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 10303--10303 [] @texttt 4: stopifnot(validObject(cu <- as(tu, "dtCMatrix")), validObject(t( cu)),[] [135] [136] Overfull \hbox (26.43913pt too wide) in paragraph at lines 10382--10382 []@texttt #5 0xb7d6c0a5 in do_random2 (call=0x94bf7d4, op=0x92580e8, args=0x9 698f98,[] [137] [138] [139] Underfull \hbox (badness 10000) in paragraph at lines 10617--10619 [][][]@smallrm See [][]@smalltt https:// svn. r-project. org/ R-dev-web/ t runk/ CRAN/ QA/ Simon/ R-build/ fixpathR[][]@smallrm : [140] Overfull \hbox (124.16682pt too wide) in paragraph at lines 10673--10673 []@texttt boot.f:61: warning: type of ddot does not match original declaration [-Wlto-type-mismatch][] Overfull \hbox (147.16158pt too wide) in paragraph at lines 10692--10692 []@texttt rkpk2.f:77:5: warning: type of dstup does not match original declaration [-Wlto-type-mismatch][] Overfull \hbox (141.41289pt too wide) in paragraph at lines 10703--10703 []@texttt reg.f:78:33: warning: type of dqrdc does not match original declaration [-Wlto-type-mismatch][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 10723--10723 [] @tex ttt 1[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 10732--10732 [] @tex ttt 1[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 10733--10733 []@texttt Warning: Type mismatch in argument jpvt at (1); passed REAL(8) to INTEGER(4)[] [141] Chapter 5 [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] Overfull \hbox (30.87428pt too wide) in paragraph at lines 11535--11535 [] @texttt double *w, int *iper, double *span, double *al pha,[] Overfull \hbox (51.66371pt too wide) in paragraph at lines 11599--11599 []@smalltt y[accept] <- .Call("spline_value", knots, coeff, ord, x[accept], de riv, PACKAGE = "splines")[] [153] [154] Overfull \hbox (60.93126pt too wide) in paragraph at lines 11765--11765 [] @texttt na_omit_xts_func fun = (na_omit_xts_func) R_GetCCallable("xts", "n a_omit_xts");[] [155] [156] [157] [158] [159] [160] Overfull \hbox (37.93651pt too wide) in paragraph at lines 12205--12205 []@texttt PKG_LIBS=-L"$(PKGB_PATH)$(R_ARCH)" -Wl,-rpath,"$(PKGB_PATH)$(R_ARCH) " -lpackB[] [161] [162] [163] [164] [165] [166] [167] [168] [169] Writing index file R-exts.ae [170] [171] Overfull \hbox (32.18782pt too wide) in paragraph at lines 13098--13098 [] @texttt Rf_error("value is not a numeric vector with at least one el ement");[] [172] Overfull \hbox (32.18782pt too wide) in paragraph at lines 13167--13167 [] @texttt if(ign == NA_LOGICAL) Rf_error(" ignore_quotes must be TRUE or FALSE");[] [173] [174] Underfull \hbox (badness 7576) in paragraph at lines 13398--13406 []@textrm Some con-ve-nience func-tions for work-ing with pairlist ob-jects in- clude @texttt Rf_ [175] [176] [177] Overfull \hbox (49.43388pt too wide) in paragraph at lines 13678--13678 [] @texttt Rf_isNull(TAG(args)) ? "" : Rf_translateChar(PRINTNAME(T AG(args)));[] [178] [179] Overfull \hbox (20.69044pt too wide) in paragraph at lines 13846--13846 [] @texttt if(!Rf_isEnvironment(rho)) Rf_error(" rho should be an environment");[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 13874--13874 [] @texttt if(!Rf_isEnvironment(rho)) Rf_error(" rho should be an environment");[] [180] [181] Overfull \hbox (14.94176pt too wide) in paragraph at lines 13986--13986 [] @texttt // a version with (too) much PROTECT()ion .. "better safe than s orry"[] [182] [183] Overfull \hbox (32.18782pt too wide) in paragraph at lines 14110--14110 [] @texttt gradient = PROTECT(Rf_allocMatrix(REALSXP, LENGTH(ans), LENGTH(t heta)));[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 14117--14117 [] @texttt for(i = 0, start = 0; i < LENGTH(theta); i++, start += LENGTH(an s)) {[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 14118--14118 [] @texttt par = PROTECT(Rf_findVar(Rf_installChar(STRING_ELT(theta, i) ), rho));[] [184] Overfull \hbox (32.18782pt too wide) in paragraph at lines 14172--14172 [] @texttt gradient = PROTECT(Rf_allocMatrix(REALSXP, LENGTH(ans), LENGTH(t heta)));[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 14185--14185 [] @texttt for(i = 0, start = 0; i < LENGTH(theta); i++, start += LENGTH(an s)) {[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 14186--14186 [] @texttt par = PROTECT(Rf_findVar(Rf_installChar(STRING_ELT(theta, i) ), rho));[] [185] Overfull \hbox (26.43913pt too wide) in paragraph at lines 14286--14286 [] @texttt cmdexpr = PROTECT(R_ParseVector(cmdSexp, -1, &status, R_NilV alue));[] [186] [187] [188] Overfull \hbox (14.94176pt too wide) in paragraph at lines 14461--14461 []@texttt void R_RegisterCFinalizerEx(SEXP s, R_CFinalizer_t fun, Rboolean one xit);[] [189] Overfull \hbox (60.93126pt too wide) in paragraph at lines 14553--14553 [] @texttt ptr = R_MakeExternalPtr(thisHandle, Rf_install("RODBC_channel"), R_NilValue);[] [190] Overfull \hbox (72.42863pt too wide) in paragraph at lines 14679--14679 []@texttt typedef enum {CE_NATIVE, CE_UTF8, CE_LATIN1, CE_BYTES, CE_SYMBOL, CE _ANY} cetype_t;[] [191] [192] Chapter 6 [193] [194] [195] [196] Writing index file R-exts.for [197] [198] [199] [200] [201] [202] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15677--15677 [] @texttt call cmsg(msg//c_null_char) ! need to concatenate a nul term inator[] Underfull \hbox (badness 10000) in paragraph at lines 15695--15700 @texttt com/ content/ www/ us/ en/ docs/ fortran-compiler/ developer-gui de-reference/ [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] Underfull \hbox (badness 10000) in paragraph at lines 16506--16510 []@texttt R_orderVector()[] @textrm cor-re-sponds to R's @texttt order(..., na .last, decreasing)[]@textrm . [213] [214] [215] Overfull \hbox (14.94176pt too wide) in paragraph at lines 16734--16734 [] @texttt SEXP (*hndlr)(SEXP cond, void *hdata), void *hd ata);[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 16741--16741 [] @texttt SEXP (*hndlr)(SEXP cond, void *hdata) , void *hdata)[] Overfull \hbox (26.43913pt too wide) in paragraph at lines 16770--16770 [] @texttt void (*clean)(void *data, Rboolean jump), void *cdata,[] [216] [217] [218] [219] [220] [221] [222] [223] [224] [225] [226] Chapter 7 [227] [228] Chapter 8 [229] [230] Writing index file R-exts.em [231] Overfull \hbox (43.6852pt too wide) in paragraph at lines 17964--17964 []@texttt ## replace $(LIBR) $(LIBS) by $(STATIC_LIBR) if R was built with a s tatic libR[] [232] Overfull \hbox (20.69044pt too wide) in paragraph at lines 18007--18007 []@texttt extern int (*ptr_R_ReadConsole)(const char *, unsigned char *, int, int);[] Overfull \hbox (55.18257pt too wide) in paragraph at lines 18022--18022 []@texttt extern int (*ptr_R_EditFiles)(int, const char **, const char **, co nst char *);[] [233] [234] [235] [236] [237] [238] [239] [240] [241] (Function and variable index) [242] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.vrs [243] [244] [245] [246] [247] [248]) (API index) [249] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.aps [250] [251] [252]) (Fortran API index) [253] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.fors) (Experimental API index) [254] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.aes [255]) (Embedding API index) [256] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.ems) (Concept index) [257] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.cps [258]) [259] ) (see the transcript file for additional information) Output written on R-exts.pdf (267 pages, 1134563 bytes). Transcript written on R-exts.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --pdf R-intro.texi This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-intro.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-intro.vr (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (/build/reproducible-path/r-base-4.5.0/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] (Preface) Cross reference values unknown; you must run TeX again. Chapter 1 [1] Writing index file R-intro.cp [2] [3] [4] [5] Chapter 2 [6] [7] [8] [9] [10] [11] [12] Chapter 3 [13] [14] [15] Chapter 4 [16] [17] Chapter 5 [18] [19] [20] [21] [22] [23] [24] [25] [26] [27] Chapter 6 [28] [29] [30] [31] Chapter 7 [32] [33] [34] Chapter 8 [35] [36] [37] [38] [39] [40] [41] Chapter 9 [42] [43] Chapter 10 [44] [45] [46] [47] [48] [49] [50] [51] [52] [53] Chapter 11 [54] [55] [56] [57] [58] [59] [60] Underfull \hbox (badness 10000) in paragraph at lines 4726--4728 @texttt logit[]@textrm , @texttt probit[]@textrm , @texttt cloglog[]@textrm , @texttt identity[]@textrm , [61] [62] [63] [64] [65] Underfull \hbox (badness 10000) in paragraph at lines 5139--5149 [][]@textbf Mixed mod-els. @textrm The rec-om-mended [][]@textbf nlme @textrm (@texttt https:// CRAN. R-project. org/ [66] Chapter 12 [67] [68] [69] [70] [71] Overfull \hbox (26.43913pt too wide) in paragraph at lines 5603--5603 []@texttt > text(x, y, expression(paste(bgroup("(", atop(n, x), ")"), p^x, q^{ n-x})))[] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] Chapter 13 [82] Underfull \hbox (badness 10000) in paragraph at lines 6298--6303 []@textrm Users con-nected to the In-ter-net can use the @texttt install.packag es()[] @textrm and [83] Chapter 14 [84] [85] Underfull \hbox (badness 10000) in paragraph at lines 6493--6498 []@textrm Windows' UNC filepaths (such as @texttt \\server\dir1\dir2\file[] @t extrm and [86] Appendix A [87] [88] [89] [90] Appendix B [91] [92] [93] [94] [95] [96] [97] [98] Appendix C [99] [100] (References) [101] (Function and variable index) [102] No file R-intro.vrs. (Concept index) [103] No file R-intro.cps. [104] ) (see the transcript file for additional information) Output written on R-intro.pdf (107 pages, 573034 bytes). Transcript written on R-intro.log. This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-intro.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-intro.vr (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (/build/reproducible-path/r-base-4.5.0/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-intro.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-intro.toc [-1] [-2] [-3]) [-4] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-intro.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-intro.toc) (Preface) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-intro.aux) Chapter 1 [1] Writing index file R-intro.cp [2] [3] [4] [5] Chapter 2 [6] [7] [8] [9] [10] [11] [12] Chapter 3 [13] [14] [15] Chapter 4 [16] [17] Chapter 5 [18] [19] [20] [21] [22] [23] [24] [25] [26] [27] Chapter 6 [28] [29] [30] [31] Chapter 7 [32] [33] [34] Chapter 8 [35] [36] [37] [38] [39] [40] [41] Chapter 9 [42] [43] Chapter 10 [44] [45] [46] [47] [48] [49] [50] [51] [52] [53] Chapter 11 [54] [55] [56] [57] [58] [59] [60] Underfull \hbox (badness 10000) in paragraph at lines 4726--4728 @texttt logit[]@textrm , @texttt probit[]@textrm , @texttt cloglog[]@textrm , @texttt identity[]@textrm , [61] [62] [63] [64] [65] Underfull \hbox (badness 10000) in paragraph at lines 5139--5149 [][]@textbf Mixed mod-els. @textrm The rec-om-mended [][]@textbf nlme @textrm (@texttt https:// CRAN. R-project. org/ [66] Chapter 12 [67] [68] [69] [70] [71] Overfull \hbox (26.43913pt too wide) in paragraph at lines 5603--5603 []@texttt > text(x, y, expression(paste(bgroup("(", atop(n, x), ")"), p^x, q^{ n-x})))[] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] Chapter 13 [82] Underfull \hbox (badness 10000) in paragraph at lines 6298--6303 []@textrm Users con-nected to the In-ter-net can use the @texttt install.packag es()[] @textrm and [83] Chapter 14 [84] [85] Underfull \hbox (badness 10000) in paragraph at lines 6493--6498 []@textrm Windows' UNC filepaths (such as @texttt \\server\dir1\dir2\file[] @t extrm and [86] Appendix A [87] [88] [89] [90] Appendix B [91] [92] [93] [94] [95] [96] [97] [98] Appendix C [99] [100] (References) [101] (Function and variable index) [102] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-intro.vrs [103] [104]) (Concept index) [105] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-intro.cps [106]) [107] ) (see the transcript file for additional information) Output written on R-intro.pdf (113 pages, 624704 bytes). Transcript written on R-intro.log. This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-intro.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-intro.vr (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (/build/reproducible-path/r-base-4.5.0/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-intro.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-intro.toc [-1] [-2] [-3]) [-4] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-intro.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-intro.toc) (Preface) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-intro.aux) Chapter 1 [1] Writing index file R-intro.cp [2] [3] [4] [5] Chapter 2 [6] [7] [8] [9] [10] [11] [12] Chapter 3 [13] [14] [15] Chapter 4 [16] [17] Chapter 5 [18] [19] [20] [21] [22] [23] [24] [25] [26] [27] Chapter 6 [28] [29] [30] [31] Chapter 7 [32] [33] [34] Chapter 8 [35] [36] [37] [38] [39] [40] [41] Chapter 9 [42] [43] Chapter 10 [44] [45] [46] [47] [48] [49] [50] [51] [52] [53] Chapter 11 [54] [55] [56] [57] [58] [59] [60] Underfull \hbox (badness 10000) in paragraph at lines 4726--4728 @texttt logit[]@textrm , @texttt probit[]@textrm , @texttt cloglog[]@textrm , @texttt identity[]@textrm , [61] [62] [63] [64] [65] Underfull \hbox (badness 10000) in paragraph at lines 5139--5149 [][]@textbf Mixed mod-els. @textrm The rec-om-mended [][]@textbf nlme @textrm (@texttt https:// CRAN. R-project. org/ [66] Chapter 12 [67] [68] [69] [70] [71] Overfull \hbox (26.43913pt too wide) in paragraph at lines 5603--5603 []@texttt > text(x, y, expression(paste(bgroup("(", atop(n, x), ")"), p^x, q^{ n-x})))[] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] Chapter 13 [82] Underfull \hbox (badness 10000) in paragraph at lines 6298--6303 []@textrm Users con-nected to the In-ter-net can use the @texttt install.packag es()[] @textrm and [83] Chapter 14 [84] [85] Underfull \hbox (badness 10000) in paragraph at lines 6493--6498 []@textrm Windows' UNC filepaths (such as @texttt \\server\dir1\dir2\file[] @t extrm and [86] Appendix A [87] [88] [89] [90] Appendix B [91] [92] [93] [94] [95] [96] [97] [98] Appendix C [99] [100] (References) [101] (Function and variable index) [102] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-intro.vrs [103] [104]) (Concept index) [105] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-intro.cps [106]) [107] ) (see the transcript file for additional information) Output written on R-intro.pdf (113 pages, 624699 bytes). Transcript written on R-intro.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --pdf R-ints.texi This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-ints.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-ints.vr (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (/build/reproducible-path/r-base-4.5.0/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] Chapter 1 Writing index file R-ints.cp [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] Overfull \hbox (49.43388pt too wide) in paragraph at lines 1444--1444 [] @texttt length(nM <- asNamespace("Matrix") ) # 941 for M atrix 1.2-6[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 1445--1445 [] @texttt length(meth <- grep("^[.]__T__", names(nM), value=TRUE))# 107 gener ics with methods[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 1446--1446 [] @texttt length(meth.Ops <- nM$^^R.__T__Ops:base^^R) # 71 methods for the Ops (group)generic[] Overfull \hbox (158.65895pt too wide) in paragraph at lines 1447--1447 [] @texttt head(sort(names(meth.Ops))) ## "abIndex#abIndex" ... "ANY#ddiMatrix " "ANY#ldiMatrix" "ANY#Matrix"[] [19] [20] [21] [22] [23] [24] Chapter 2 [25] Overfull \hbox (26.43913pt too wide) in paragraph at lines 1953--1953 [] @texttt if (!is.character(x)) x <- structure(as.character(x), names = na mes(x))[] [26] [27] [28] [29] Chapter 3 [30] [31] Chapter 4 [32] [33] Chapter 5 [34] Chapter 6 [35] [36] [37] [38] [39] [40] Underfull \hbox (badness 10000) in paragraph at lines 3041--3047 []@textrm The @texttt glyphs[] @textrm com-po-nent re-ports whether ren-der-in g glyphs (e.g., via [41] [42] [43] [44] [45] [46] [47] [48] Chapter 7 [49] Underfull \hbox (badness 10000) in paragraph at lines 3697--3706 @textrm it uses @texttt /Library/Frameworks/R.framework/R[]@textrm . This is a sym-bolic link, Underfull \hbox (badness 10000) in paragraph at lines 3697--3706 @texttt /Library/Frameworks/R.framework/Versions/Current/Resources/lib/libR.dyl ib[]@textrm , [50] Overfull \hbox (16.81319pt too wide) in paragraph at lines 3748--3752 []@textrm The de-fault path for a per-sonal li-brary di-rec-tory is set as @te xttt ~/Library/R/arch/x.y/library[]@textrm . Chapter 8 [51] [52] [53] [54] [55] Underfull \hbox (badness 10000) in paragraph at lines 4086--4094 []@textrm A string with comma-separated @textttsl name@texttt =@textttsl value [] @textrm pairs (with @textsl value[] @textrm a Underfull \hbox (badness 10000) in paragraph at lines 4086--4094 @textrm log-i-cal con-stant) giv-ing ad-di-tional ar-gu-ments for the [][]@tex tbf codetools Underfull \hbox (badness 10000) in paragraph at lines 4086--4094 @textrm (@texttt https:// CRAN. R-project. org/ package=codetools[]@textrm )[] func-tions used Underfull \hbox (badness 10000) in paragraph at lines 4086--4094 @textrm to us-ing @texttt skipWith = TRUE[]@textrm , @texttt suppressPartialMa tchArgs = FALSE[] @textrm and [56] [57] [58] [59] [60] [61] Underfull \hbox (badness 10000) in paragraph at lines 4458--4463 @texttt blog. r-project. org/ 2022/ 04/ 08/ enhancements-to-html-documen tation/ [62] [63] [64] [65] [66] Chapter 9 [67] [68] Chapter 10 [69] Chapter 11 [70] Chapter 12 [71] [72] (Function and variable index) [73] [74] No file R-ints.vrs. (Concept index) [75] No file R-ints.cps. [76] ) (see the transcript file for additional information) Output written on R-ints.pdf (79 pages, 422153 bytes). Transcript written on R-ints.log. This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-ints.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-ints.vr (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (/build/reproducible-path/r-base-4.5.0/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-ints.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-ints.toc [-1] [-2]) [-3] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-ints.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-ints.toc) Chapter 1 (/build/reproducible-path/r-base-4.5.0/doc/manual/R-ints.aux) Writing index file R-ints.cp [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] Overfull \hbox (49.43388pt too wide) in paragraph at lines 1444--1444 [] @texttt length(nM <- asNamespace("Matrix") ) # 941 for M atrix 1.2-6[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 1445--1445 [] @texttt length(meth <- grep("^[.]__T__", names(nM), value=TRUE))# 107 gener ics with methods[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 1446--1446 [] @texttt length(meth.Ops <- nM$^^R.__T__Ops:base^^R) # 71 methods for the Ops (group)generic[] Overfull \hbox (158.65895pt too wide) in paragraph at lines 1447--1447 [] @texttt head(sort(names(meth.Ops))) ## "abIndex#abIndex" ... "ANY#ddiMatrix " "ANY#ldiMatrix" "ANY#Matrix"[] [19] [20] [21] [22] [23] [24] Chapter 2 [25] Overfull \hbox (26.43913pt too wide) in paragraph at lines 1953--1953 [] @texttt if (!is.character(x)) x <- structure(as.character(x), names = na mes(x))[] [26] [27] [28] [29] Chapter 3 [30] [31] Chapter 4 [32] [33] Chapter 5 [34] Chapter 6 [35] [36] [37] [38] [39] [40] Underfull \hbox (badness 10000) in paragraph at lines 3041--3047 []@textrm The @texttt glyphs[] @textrm com-po-nent re-ports whether ren-der-in g glyphs (e.g., via [41] [42] [43] [44] [45] [46] [47] [48] Chapter 7 [49] Underfull \hbox (badness 10000) in paragraph at lines 3697--3706 @textrm it uses @texttt /Library/Frameworks/R.framework/R[]@textrm . This is a sym-bolic link, Underfull \hbox (badness 10000) in paragraph at lines 3697--3706 @texttt /Library/Frameworks/R.framework/Versions/Current/Resources/lib/libR.dyl ib[]@textrm , [50] Overfull \hbox (16.81319pt too wide) in paragraph at lines 3748--3752 []@textrm The de-fault path for a per-sonal li-brary di-rec-tory is set as @te xttt ~/Library/R/arch/x.y/library[]@textrm . Chapter 8 [51] [52] [53] [54] [55] Underfull \hbox (badness 10000) in paragraph at lines 4086--4094 []@textrm A string with comma-separated @textttsl name@texttt =@textttsl value [] @textrm pairs (with @textsl value[] @textrm a Underfull \hbox (badness 10000) in paragraph at lines 4086--4094 @textrm log-i-cal con-stant) giv-ing ad-di-tional ar-gu-ments for the [][]@tex tbf codetools Underfull \hbox (badness 10000) in paragraph at lines 4086--4094 @textrm (@texttt https:// CRAN. R-project. org/ package=codetools[]@textrm )[] func-tions used Underfull \hbox (badness 10000) in paragraph at lines 4086--4094 @textrm to us-ing @texttt skipWith = TRUE[]@textrm , @texttt suppressPartialMa tchArgs = FALSE[] @textrm and [56] [57] [58] [59] [60] [61] Underfull \hbox (badness 10000) in paragraph at lines 4458--4463 @texttt blog. r-project. org/ 2022/ 04/ 08/ enhancements-to-html-documen tation/ [62] [63] [64] [65] [66] Chapter 9 [67] [68] Chapter 10 [69] Chapter 11 [70] Chapter 12 [71] [72] (Function and variable index) [73] [74] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-ints.vrs [75] [76]) (Concept index) [77] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-ints.cps) [78] ) (see the transcript file for additional information) Output written on R-ints.pdf (83 pages, 470788 bytes). Transcript written on R-ints.log. This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-ints.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-ints.vr (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (/build/reproducible-path/r-base-4.5.0/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-ints.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-ints.toc [-1] [-2]) [-3] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-ints.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-ints.toc) Chapter 1 (/build/reproducible-path/r-base-4.5.0/doc/manual/R-ints.aux) Writing index file R-ints.cp [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] Overfull \hbox (49.43388pt too wide) in paragraph at lines 1444--1444 [] @texttt length(nM <- asNamespace("Matrix") ) # 941 for M atrix 1.2-6[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 1445--1445 [] @texttt length(meth <- grep("^[.]__T__", names(nM), value=TRUE))# 107 gener ics with methods[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 1446--1446 [] @texttt length(meth.Ops <- nM$^^R.__T__Ops:base^^R) # 71 methods for the Ops (group)generic[] Overfull \hbox (158.65895pt too wide) in paragraph at lines 1447--1447 [] @texttt head(sort(names(meth.Ops))) ## "abIndex#abIndex" ... "ANY#ddiMatrix " "ANY#ldiMatrix" "ANY#Matrix"[] [19] [20] [21] [22] [23] [24] Chapter 2 [25] Overfull \hbox (26.43913pt too wide) in paragraph at lines 1953--1953 [] @texttt if (!is.character(x)) x <- structure(as.character(x), names = na mes(x))[] [26] [27] [28] [29] Chapter 3 [30] [31] Chapter 4 [32] [33] Chapter 5 [34] Chapter 6 [35] [36] [37] [38] [39] [40] Underfull \hbox (badness 10000) in paragraph at lines 3041--3047 []@textrm The @texttt glyphs[] @textrm com-po-nent re-ports whether ren-der-in g glyphs (e.g., via [41] [42] [43] [44] [45] [46] [47] [48] Chapter 7 [49] Underfull \hbox (badness 10000) in paragraph at lines 3697--3706 @textrm it uses @texttt /Library/Frameworks/R.framework/R[]@textrm . This is a sym-bolic link, Underfull \hbox (badness 10000) in paragraph at lines 3697--3706 @texttt /Library/Frameworks/R.framework/Versions/Current/Resources/lib/libR.dyl ib[]@textrm , [50] Overfull \hbox (16.81319pt too wide) in paragraph at lines 3748--3752 []@textrm The de-fault path for a per-sonal li-brary di-rec-tory is set as @te xttt ~/Library/R/arch/x.y/library[]@textrm . Chapter 8 [51] [52] [53] [54] [55] Underfull \hbox (badness 10000) in paragraph at lines 4086--4094 []@textrm A string with comma-separated @textttsl name@texttt =@textttsl value [] @textrm pairs (with @textsl value[] @textrm a Underfull \hbox (badness 10000) in paragraph at lines 4086--4094 @textrm log-i-cal con-stant) giv-ing ad-di-tional ar-gu-ments for the [][]@tex tbf codetools Underfull \hbox (badness 10000) in paragraph at lines 4086--4094 @textrm (@texttt https:// CRAN. R-project. org/ package=codetools[]@textrm )[] func-tions used Underfull \hbox (badness 10000) in paragraph at lines 4086--4094 @textrm to us-ing @texttt skipWith = TRUE[]@textrm , @texttt suppressPartialMa tchArgs = FALSE[] @textrm and [56] [57] [58] [59] [60] [61] Underfull \hbox (badness 10000) in paragraph at lines 4458--4463 @texttt blog. r-project. org/ 2022/ 04/ 08/ enhancements-to-html-documen tation/ [62] [63] [64] [65] [66] Chapter 9 [67] [68] Chapter 10 [69] Chapter 11 [70] Chapter 12 [71] [72] (Function and variable index) [73] [74] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-ints.vrs [75] [76]) (Concept index) [77] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-ints.cps) [78] ) (see the transcript file for additional information) Output written on R-ints.pdf (83 pages, 470782 bytes). Transcript written on R-ints.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --pdf R-lang.texi This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-lang.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-lang.vr (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (/build/reproducible-path/r-base-4.5.0/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] Chapter 1 Writing index file R-lang.cp Chapter 2 [1] [2] Cross reference values unknown; you must run TeX again. Overfull \hbox (8.41086pt too wide) in paragraph at lines 255--256 @textbf storage.mode| [3] [4] [5] [6] [7] [8] Chapter 3 [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] Chapter 4 [24] [25] [26] [27] Chapter 5 [28] [29] [30] [31] [32] [33] [34] Chapter 6 [35] [36] [37] [38] [39] [40] [41] [42] [43] Chapter 7 [44] [45] Chapter 8 [46] [47] Chapter 9 [48] [49] [50] Chapter 10 [51] [52] [53] [54] [55] [56] [57] [58] (References) [59] (Function and variable index) [60] No file R-lang.vrs. (Concept index) [61] No file R-lang.cps. [62] ) (see the transcript file for additional information) Output written on R-lang.pdf (65 pages, 348665 bytes). Transcript written on R-lang.log. This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-lang.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-lang.vr (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (/build/reproducible-path/r-base-4.5.0/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-lang.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-lang.toc [-1] [-2]) [-3] [-4] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-lang.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-lang.toc) Chapter 1 (/build/reproducible-path/r-base-4.5.0/doc/manual/R-lang.aux) Writing index file R-lang.cp Chapter 2 [1] [2] Overfull \hbox (8.41086pt too wide) in paragraph at lines 255--256 @textbf storage.mode| [3] [4] [5] [6] [7] [8] Chapter 3 [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] Chapter 4 [24] [25] [26] [27] Chapter 5 [28] [29] [30] [31] [32] [33] [34] Chapter 6 [35] [36] [37] [38] [39] [40] [41] [42] [43] Chapter 7 [44] [45] Chapter 8 [46] [47] Chapter 9 [48] [49] [50] Chapter 10 [51] [52] [53] [54] [55] [56] [57] [58] (References) [59] (Function and variable index) [60] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-lang.vrs [61]) (Concept index) [62] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-lang.cps) [63] [64] ) (see the transcript file for additional information) Output written on R-lang.pdf (70 pages, 391239 bytes). Transcript written on R-lang.log. This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-lang.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-lang.vr (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (/build/reproducible-path/r-base-4.5.0/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-lang.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-lang.toc [-1] [-2]) [-3] [-4] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-lang.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-lang.toc) Chapter 1 (/build/reproducible-path/r-base-4.5.0/doc/manual/R-lang.aux) Writing index file R-lang.cp Chapter 2 [1] [2] Overfull \hbox (8.41086pt too wide) in paragraph at lines 255--256 @textbf storage.mode| [3] [4] [5] [6] [7] [8] Chapter 3 [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] Chapter 4 [24] [25] [26] [27] Chapter 5 [28] [29] [30] [31] [32] [33] [34] Chapter 6 [35] [36] [37] [38] [39] [40] [41] [42] [43] Chapter 7 [44] [45] Chapter 8 [46] [47] Chapter 9 [48] [49] [50] Chapter 10 [51] [52] [53] [54] [55] [56] [57] [58] (References) [59] (Function and variable index) [60] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-lang.vrs [61]) (Concept index) [62] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-lang.cps) [63] [64] ) (see the transcript file for additional information) Output written on R-lang.pdf (70 pages, 391235 bytes). Transcript written on R-lang.log. installing R manuals in PDF format ... make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/doc/manual' make[1]: Leaving directory '/build/reproducible-path/r-base-4.5.0' make prefix=/build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr \ infodir=/build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info install-info make[1]: Entering directory '/build/reproducible-path/r-base-4.5.0' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/doc/manual' /usr/bin/texi2any --enable-encoding -I. R-FAQ.texi /usr/bin/texi2any --enable-encoding -I. R-admin.texi /usr/bin/texi2any --enable-encoding -I. R-data.texi /usr/bin/texi2any --enable-encoding -I. R-exts.texi /usr/bin/texi2any --enable-encoding -I. R-intro.texi /usr/bin/texi2any --enable-encoding -I. R-ints.texi /usr/bin/texi2any --enable-encoding -I. R-lang.texi mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info /usr/bin/install -c -m 644 "./dir" "/build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info" installing R info pages ... updating '/build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/dir' ... you need to adjust /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/dir manually you need to adjust /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/dir manually you need to adjust /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/dir manually you need to adjust /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/dir manually you need to adjust /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/dir manually you need to adjust /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/dir manually you need to adjust /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/dir manually make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/doc/manual' make[1]: Leaving directory '/build/reproducible-path/r-base-4.5.0' dh_movefiles --sourcedir=debian/r-base-core -pr-doc-pdf dh_movefiles --sourcedir=debian/r-base-core -pr-doc-html gunzip -9v /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/*.gz /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-FAQ.info.gz: 67.5% -- replaced with /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-FAQ.info /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-admin.info.gz: 68.1% -- replaced with /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-admin.info /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-data.info.gz: 70.8% -- replaced with /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-data.info /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-exts.info-1.gz: 66.9% -- replaced with /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-exts.info-1 /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-exts.info-2.gz: 67.9% -- replaced with /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-exts.info-2 /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-exts.info-3.gz: 80.1% -- replaced with /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-exts.info-3 /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-exts.info.gz: 70.2% -- replaced with /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-exts.info /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-intro.info.gz: 70.4% -- replaced with /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-intro.info /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-ints.info.gz: 68.8% -- replaced with /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-ints.info /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-lang.info.gz: 72.0% -- replaced with /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-lang.info dh_movefiles --sourcedir=debian/r-base-core -pr-doc-info rm -vf /build/reproducible-path/r-base-4.5.0/debian/r-doc-info/usr/share/info/dir \ /build/reproducible-path/r-base-4.5.0/debian/r-doc-info/usr/share/info/dir.old removed '/build/reproducible-path/r-base-4.5.0/debian/r-doc-info/usr/share/info/dir' touch install-indep-stamp dh_installdirs -pr-mathlib usr/include usr/lib \ usr/share/lintian/overrides \ usr/lib/pkgconfig dh_movefiles --sourcedir=debian/r-base-core -pr-mathlib (cd /build/reproducible-path/r-base-4.5.0/debian/r-mathlib/usr/lib; \ ls -l ; \ mv -v libRmath.so libRmath.so.1.0.0; \ ln -sv libRmath.so.1.0.0 libRmath.so.1; \ ln -sv libRmath.so.1 libRmath.so) total 2276 -rw-r--r-- 1 sbuild sbuild 1504196 Jul 21 15:34 libRmath.a -rwxr-xr-x 1 sbuild sbuild 815136 Jul 21 15:34 libRmath.so drwxr-xr-x 2 sbuild sbuild 4096 Jul 21 15:36 pkgconfig renamed 'libRmath.so' -> 'libRmath.so.1.0.0' 'libRmath.so.1' -> 'libRmath.so.1.0.0' 'libRmath.so' -> 'libRmath.so.1' install -m 0644 src/include/Rmath.h \ /build/reproducible-path/r-base-4.5.0/debian/r-mathlib/usr/include install -m 0644 debian/Rprofile.site /build/reproducible-path/r-base-4.5.0/debian/r-base-core/etc/R install -m 0644 debian/Renviron.site /build/reproducible-path/r-base-4.5.0/debian/r-base-core/etc/R (cd /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/lib/R/etc; \ mv Makeconf repositories ldpaths ../../../../etc/R/; \ mv Renviron Renviron.ucf; \ ln -s /etc/R/Makeconf .; \ ln -s /etc/R/Renviron .; \ ln -s /etc/R/Renviron.site .; \ ln -s /etc/R/Rprofile.site .; \ ln -s /etc/R/ldpaths .; \ ln -s /etc/R/repositories . ) dh_bash-completion # edd 12 Jan 2016 new location #install -m 0644 debian/R.bash-completion \ # debian/r-base-core/usr/share/bash-completion/completions/R (cd /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/lib/; \ ln -sv R/lib/libR.so . ) './libR.so' -> 'R/lib/libR.so' (cd debian/icon-class-patch && munpack rlogo_icon.png.mpack) rlogo_icon.png (application/octet-stream) install -m 0644 debian/icon-class-patch/rlogo_icon.png \ debian/r-base-core/usr/share/icons/hicolor/48x48/apps install -m 0644 debian/icon-class-patch/Rlogo.svg \ debian/r-base-core/usr/share/icons/hicolor/scalable/apps/rlogo_icon.svg install -m 0644 debian/icon-class-patch/R.desktop \ debian/r-base-core/usr/share/applications rm debian/icon-class-patch/rlogo_icon.png touch install-arch-stamp *** binary-arch *** dh_testdir -a dh_testroot -a dh_installdocs -pr-base-core doc/NEWS.* README \ debian/README.Atlas \ debian/README.mathlib dh_installdocs -pr-mathlib doc/NEWS.* README \ debian/README.mathlib dh_installexamples -pr-mathlib src/nmath/standalone/test.c (cd /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/doc/r-base-core && ln -s ../../R/doc .) (cd /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/doc/r-base-core && ln -s ../../../lib/R/library .) install -p -m 0644 debian/r-base-core.lintian \ /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/lintian/overrides/r-base-core install -p -m 0644 debian/r-recommended.lintian \ /build/reproducible-path/r-base-4.5.0/debian/r-recommended/usr/share/lintian/overrides/r-recommended install -p -m 0644 debian/r-mathlib.lintian \ /build/reproducible-path/r-base-4.5.0/debian/r-mathlib/usr/share/lintian/overrides/r-mathlib dh_installchangelogs -a -k doc/NEWS dh_strip -a dh_compress -a dh_fixperms -a dh_link -a dh_makeshlibs -a dh_installdeb -a dh_perl -a dh_shlibdeps -a -l /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/lib/R/lib dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-aarch64.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-aarch64.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged dpkg-shlibdeps: warning: can't extract name and version from library name 'libR.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libtcl8.6.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libtk8.6.so' dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libtirpc3t64 from: /lib/aarch64-linux-gnu/libtirpc.so.3 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libtirpc3t64 to: /lib/aarch64-linux-gnu/libtirpc.so.3.usr-is-merged dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libreadline8t64 from: /lib/aarch64-linux-gnu/libreadline.so.8 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libreadline8t64 to: /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged *** Getting graphics engine version from 'GraphicsEngine.h' header echo R_GE_version | cpp -I ./src/include/ -include R_ext/GraphicsEngine.h | tail -n1 | sed 's/^/graphicsengine:Version=/' >> debian/r-base-core.substvars dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'r-base-core' in '../r-base-core_4.5.0-3_arm64.deb'. dpkg-deb: building package 'r-base-core-dbgsym' in '../r-base-core-dbgsym_4.5.0-3_arm64.deb'. dpkg-deb: building package 'r-mathlib-dbgsym' in '../r-mathlib-dbgsym_4.5.0-3_arm64.deb'. dpkg-deb: building package 'r-mathlib' in '../r-mathlib_4.5.0-3_arm64.deb'. dpkg-genbuildinfo --build=any -O../r-base_4.5.0-3_arm64.buildinfo dpkg-genchanges --build=any -O../r-base_4.5.0-3_arm64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2025-07-21T15:36:27Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes Mon, 21 Jul 2025 15:36:29 +0000 | +------------------------------------------------------------------------------+ r-base_4.5.0-3_arm64.changes: ----------------------------- Format: 1.8 Date: Tue, 29 Apr 2025 16:56:39 -0500 Source: r-base Binary: r-base-core r-base-core-dbgsym r-mathlib r-mathlib-dbgsym Architecture: arm64 Version: 4.5.0-3 Distribution: unstable Urgency: medium Maintainer: Dirk Eddelbuettel Changed-By: Dirk Eddelbuettel Description: r-base-core - GNU R core of statistical computation and graphics system r-mathlib - GNU R standalone mathematics library Changes: r-base (4.5.0-3) unstable; urgency=medium . * debian/control: Update Breaks: for r-base-core to aid the transition of this 4.5.0 release to the upcoming 'trixie' release Checksums-Sha1: 656d148561ab7d4615ea5a9915fae056fc1d8a40 6691656 r-base-core-dbgsym_4.5.0-3_arm64.deb f8e837796291977268db0ff6e5b8d85de0fd2c25 28372012 r-base-core_4.5.0-3_arm64.deb 320dfa1fc9d4108f6c7a6706aa65f2595b975e49 16980 r-base_4.5.0-3_arm64.buildinfo 46103a15be2d418db2df4a41a01326180cae45ae 210624 r-mathlib-dbgsym_4.5.0-3_arm64.deb b612b01153482bc1bc0b1352cc332aea4e6821ed 2700308 r-mathlib_4.5.0-3_arm64.deb Checksums-Sha256: d65dd2ea95016d7ce9104e0ad9fbf18e7930fd22f420b4c6d879401a8bc55bff 6691656 r-base-core-dbgsym_4.5.0-3_arm64.deb e814922c7efb75d54b20131097e93643b0c04571d6b513e304f7875345369b55 28372012 r-base-core_4.5.0-3_arm64.deb 2cda13bdd0d294b767ad0d8ef40edcb38563cfd2852f5bc7e6cb0bb0d202009d 16980 r-base_4.5.0-3_arm64.buildinfo 65ab8e97775debde74551d2a6cabe7444814e014c56a02be81fd2c036b3a7e17 210624 r-mathlib-dbgsym_4.5.0-3_arm64.deb 25a060d53698649ffc743b0c7a633d650840e75041591f6ea4eae71c3073571f 2700308 r-mathlib_4.5.0-3_arm64.deb Files: 31e0c820fe81f9bf7c52abc6be296bb9 6691656 debug optional r-base-core-dbgsym_4.5.0-3_arm64.deb a05574dd7d4aa82766c39590320ab651 28372012 gnu-r optional r-base-core_4.5.0-3_arm64.deb 2178e25781501031166964261dcd956d 16980 gnu-r optional r-base_4.5.0-3_arm64.buildinfo ff0ea8eef604aa8f5f0544eebf6e79d9 210624 debug optional r-mathlib-dbgsym_4.5.0-3_arm64.deb 1169711567f46cfb667004a0b2e9a9ff 2700308 gnu-r optional r-mathlib_4.5.0-3_arm64.deb +------------------------------------------------------------------------------+ | Buildinfo Mon, 21 Jul 2025 15:36:30 +0000 | +------------------------------------------------------------------------------+ Format: 1.0 Source: r-base Binary: r-base-core r-base-core-dbgsym r-mathlib r-mathlib-dbgsym Architecture: arm64 Version: 4.5.0-3 Checksums-Md5: 31e0c820fe81f9bf7c52abc6be296bb9 6691656 r-base-core-dbgsym_4.5.0-3_arm64.deb a05574dd7d4aa82766c39590320ab651 28372012 r-base-core_4.5.0-3_arm64.deb ff0ea8eef604aa8f5f0544eebf6e79d9 210624 r-mathlib-dbgsym_4.5.0-3_arm64.deb 1169711567f46cfb667004a0b2e9a9ff 2700308 r-mathlib_4.5.0-3_arm64.deb Checksums-Sha1: 656d148561ab7d4615ea5a9915fae056fc1d8a40 6691656 r-base-core-dbgsym_4.5.0-3_arm64.deb f8e837796291977268db0ff6e5b8d85de0fd2c25 28372012 r-base-core_4.5.0-3_arm64.deb 46103a15be2d418db2df4a41a01326180cae45ae 210624 r-mathlib-dbgsym_4.5.0-3_arm64.deb b612b01153482bc1bc0b1352cc332aea4e6821ed 2700308 r-mathlib_4.5.0-3_arm64.deb Checksums-Sha256: d65dd2ea95016d7ce9104e0ad9fbf18e7930fd22f420b4c6d879401a8bc55bff 6691656 r-base-core-dbgsym_4.5.0-3_arm64.deb e814922c7efb75d54b20131097e93643b0c04571d6b513e304f7875345369b55 28372012 r-base-core_4.5.0-3_arm64.deb 65ab8e97775debde74551d2a6cabe7444814e014c56a02be81fd2c036b3a7e17 210624 r-mathlib-dbgsym_4.5.0-3_arm64.deb 25a060d53698649ffc743b0c7a633d650840e75041591f6ea4eae71c3073571f 2700308 r-mathlib_4.5.0-3_arm64.deb Build-Origin: Debian Build-Architecture: arm64 Build-Date: Mon, 21 Jul 2025 15:36:27 +0000 Build-Path: /build/reproducible-path/r-base-4.5.0 Installed-Build-Depends: adwaita-icon-theme (= 48.0-1), at-spi2-common (= 2.56.2-1), autoconf (= 2.72-3.1), automake (= 1:1.17-4), autopoint (= 0.23.1-2), autotools-dev (= 20240727.1), base-files (= 13.7), base-passwd (= 3.6.7), bash (= 5.2.37-2), bash-completion (= 1:2.16.0-7), binutils (= 2.44-3), binutils-aarch64-linux-gnu (= 2.44-3), binutils-common (= 2.44-3), bison (= 2:3.8.2+dfsg-1+b2), bsdextrautils (= 2.41-4), bsdutils (= 1:2.41-4), build-essential (= 12.12), bzip2 (= 1.0.8-6), ca-certificates (= 20250419), ca-certificates-java (= 20240118), comerr-dev (= 2.1-1.47.2-1+b1), coreutils (= 9.7-2), cpp (= 4:14.2.0-1), cpp-14 (= 14.2.0-19), cpp-14-aarch64-linux-gnu (= 14.2.0-19), cpp-aarch64-linux-gnu (= 4:14.2.0-1), dash (= 0.5.12-12), dbus (= 1.16.2-2), dbus-bin (= 1.16.2-2), dbus-daemon (= 1.16.2-2), dbus-session-bus-common (= 1.16.2-2), dbus-system-bus-common (= 1.16.2-2), dbus-user-session (= 1.16.2-2), dconf-gsettings-backend (= 0.40.0-5), dconf-service (= 0.40.0-5), debconf (= 1.5.91), debhelper (= 13.24.2), debianutils (= 5.22), default-jdk (= 2:1.21-76), default-jdk-headless (= 2:1.21-76), default-jre (= 2:1.21-76), default-jre-headless (= 2:1.21-76), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.14.1-2), diffutils (= 1:3.10-4), dpkg (= 1.22.18), dpkg-dev (= 1.22.18), dwz (= 0.15-1+b1), file (= 1:5.46-5), findutils (= 4.10.0-3), fontconfig (= 2.15.0-2.3), fontconfig-config (= 2.15.0-2.3), fonts-dejavu-core (= 2.37-8), fonts-dejavu-mono (= 2.37-8), fonts-lmodern (= 2.005-1), g++ (= 4:14.2.0-1), g++-14 (= 14.2.0-19), g++-14-aarch64-linux-gnu (= 14.2.0-19), g++-aarch64-linux-gnu (= 4:14.2.0-1), gcc (= 4:14.2.0-1), gcc-14 (= 14.2.0-19), gcc-14-aarch64-linux-gnu (= 14.2.0-19), gcc-14-base (= 14.2.0-19), gcc-aarch64-linux-gnu (= 4:14.2.0-1), gettext (= 0.23.1-2), gettext-base (= 0.23.1-2), gfortran (= 4:14.2.0-1), gfortran-14 (= 14.2.0-19), gfortran-14-aarch64-linux-gnu (= 14.2.0-19), gfortran-aarch64-linux-gnu (= 4:14.2.0-1), gir1.2-freedesktop (= 1.84.0-1), gir1.2-freedesktop-dev (= 1.84.0-1), gir1.2-glib-2.0 (= 2.84.1-2), gir1.2-glib-2.0-dev (= 2.84.1-2), gir1.2-harfbuzz-0.0 (= 10.2.0-1+b1), gir1.2-pango-1.0 (= 1.56.3-1), girepository-tools (= 2.84.1-2), grep (= 3.11-4+b1), groff-base (= 1.23.0-7), gtk-update-icon-cache (= 4.18.4+ds-2), gzip (= 1.13-1), hicolor-icon-theme (= 0.18-2), hostname (= 3.25), icu-devtools (= 76.1-3), init-system-helpers (= 1.68), intltool-debian (= 0.35.0+20060710.6), java-common (= 0.76), krb5-multidev (= 1.21.3-5), libacl1 (= 2.3.2-2+b1), libapache-pom-java (= 33-2), libapparmor1 (= 4.1.0-1), libarchive-zip-perl (= 1.68-1), libasan8 (= 14.2.0-19), libasound2-data (= 1.2.14-1), libasound2t64 (= 1.2.14-1), libatk-bridge2.0-0t64 (= 2.56.2-1), libatk1.0-0t64 (= 2.56.2-1), libatomic1 (= 14.2.0-19), libatspi2.0-0t64 (= 2.56.2-1), libattr1 (= 1:2.5.2-3), libaudit-common (= 1:4.0.2-2), libaudit1 (= 1:4.0.2-2+b2), libavahi-client3 (= 0.8-16), libavahi-common-data (= 0.8-16), libavahi-common3 (= 0.8-16), libbinutils (= 2.44-3), libblas-dev (= 3.12.1-2), libblas3 (= 3.12.1-2), libblkid-dev (= 2.41-4), libblkid1 (= 2.41-4), libbrotli-dev (= 1.1.0-2+b7), libbrotli1 (= 1.1.0-2+b7), libbsd0 (= 0.12.2-2), libbz2-1.0 (= 1.0.8-6), libbz2-dev (= 1.0.8-6), libc-bin (= 2.41-7), libc-dev-bin (= 2.41-7), libc6 (= 2.41-7), libc6-dev (= 2.41-7), libcairo-gobject2 (= 1.18.4-1+b1), libcairo-script-interpreter2 (= 1.18.4-1+b1), libcairo2 (= 1.18.4-1+b1), libcairo2-dev (= 1.18.4-1+b1), libcap-ng0 (= 0.8.5-4+b1), libcap2 (= 1:2.75-7), libcc1-0 (= 14.2.0-19), libcloudproviders0 (= 0.3.6-2), libcolord2 (= 1.4.7-3), libcom-err2 (= 1.47.2-1+b1), libcommons-logging-java (= 1.3.0-1), libcommons-parent-java (= 56-1), libcrypt-dev (= 1:4.4.38-1), libcrypt1 (= 1:4.4.38-1), libctf-nobfd0 (= 2.44-3), libctf0 (= 2.44-3), libcups2t64 (= 2.4.10-2+b1), libcurl4-openssl-dev (= 8.13.0-5), libcurl4t64 (= 8.13.0-5), libdatrie-dev (= 0.2.13-3+b1), libdatrie1 (= 0.2.13-3+b1), libdb5.3t64 (= 5.3.28+dfsg2-9), libdbus-1-3 (= 1.16.2-2), libdconf1 (= 0.40.0-5), libdebconfclient0 (= 0.278), libdebhelper-perl (= 13.24.2), libdeflate-dev (= 1.23-2), libdeflate0 (= 1.23-2), libdpkg-perl (= 1.22.18), libdrm-amdgpu1 (= 2.4.124-2), libdrm-common (= 2.4.124-2), libdrm2 (= 2.4.124-2), libedit2 (= 3.1-20250104-1), libelf1t64 (= 0.192-4), libepoxy0 (= 1.5.10-2), libevent-2.1-7t64 (= 2.1.12-stable-10+b1), libexpat1 (= 2.7.1-1), libexpat1-dev (= 2.7.1-1), libffi-dev (= 3.4.8-2), libffi8 (= 3.4.8-2), libfile-homedir-perl (= 1.006-2), libfile-stripnondeterminism-perl (= 1.14.1-2), libfile-which-perl (= 1.27-2), libfontbox-java (= 1:1.8.16-5), libfontconfig-dev (= 2.15.0-2.3), libfontconfig1 (= 2.15.0-2.3), libfontconfig1-dev (= 2.15.0-2.3), libfontenc1 (= 1:1.1.8-1+b2), libfreetype-dev (= 2.13.3+dfsg-1), libfreetype6 (= 2.13.3+dfsg-1), libfribidi-dev (= 1.0.16-1), libfribidi0 (= 1.0.16-1), libgbm1 (= 25.0.4-1), libgcc-14-dev (= 14.2.0-19), libgcc-s1 (= 14.2.0-19), libgdbm-compat4t64 (= 1.24-2), libgdbm6t64 (= 1.24-2), libgdk-pixbuf-2.0-0 (= 2.42.12+dfsg-2), libgdk-pixbuf2.0-common (= 2.42.12+dfsg-2), libgfortran-14-dev (= 14.2.0-19), libgfortran5 (= 14.2.0-19), libgif7 (= 5.2.2-1+b1), libgio-2.0-dev (= 2.84.1-2), libgio-2.0-dev-bin (= 2.84.1-2), libgirepository-2.0-0 (= 2.84.1-2), libgl1 (= 1.7.0-1+b2), libgl1-mesa-dri (= 25.0.4-1), libglib2.0-0t64 (= 2.84.1-2), libglib2.0-bin (= 2.84.1-2), libglib2.0-data (= 2.84.1-2), libglib2.0-dev (= 2.84.1-2), libglib2.0-dev-bin (= 2.84.1-2), libglvnd0 (= 1.7.0-1+b2), libglx-mesa0 (= 25.0.4-1), libglx0 (= 1.7.0-1+b2), libgmp-dev (= 2:6.3.0+dfsg-3), libgmp10 (= 2:6.3.0+dfsg-3), libgmpxx4ldbl (= 2:6.3.0+dfsg-3), libgnutls-dane0t64 (= 3.8.9-2), libgnutls-openssl27t64 (= 3.8.9-2), libgnutls28-dev (= 3.8.9-2), libgnutls30t64 (= 3.8.9-2), libgomp1 (= 14.2.0-19), libgprofng0 (= 2.44-3), libgraphite2-3 (= 1.3.14-2+b1), libgraphite2-dev (= 1.3.14-2+b1), libgssapi-krb5-2 (= 1.21.3-5), libgssrpc4t64 (= 1.21.3-5), libgtk-3-0t64 (= 3.24.49-3), libgtk-3-common (= 3.24.49-3), libharfbuzz-cairo0 (= 10.2.0-1+b1), libharfbuzz-dev (= 10.2.0-1+b1), libharfbuzz-gobject0 (= 10.2.0-1+b1), libharfbuzz-icu0 (= 10.2.0-1+b1), libharfbuzz-subset0 (= 10.2.0-1+b1), libharfbuzz0b (= 10.2.0-1+b1), libhogweed6t64 (= 3.10.1-1), libhwasan0 (= 14.2.0-19), libice-dev (= 2:1.1.1-1), libice6 (= 2:1.1.1-1), libicu-dev (= 76.1-3), libicu76 (= 76.1-3), libidn2-0 (= 2.3.8-2), libidn2-dev (= 2.3.8-2), libisl23 (= 0.27-1), libitm1 (= 14.2.0-19), libjansson4 (= 2.14-2+b3), libjbig-dev (= 2.1-6.1+b2), libjbig0 (= 2.1-6.1+b2), libjpeg-dev (= 1:2.1.5-3.1), libjpeg62-turbo (= 1:2.1.5-3.1), libjpeg62-turbo-dev (= 1:2.1.5-3.1), libjs-jquery (= 3.6.1+dfsg+~3.5.14-1), libk5crypto3 (= 1.21.3-5), libkadm5clnt-mit12 (= 1.21.3-5), libkadm5srv-mit12 (= 1.21.3-5), libkdb5-10t64 (= 1.21.3-5), libkeyutils1 (= 1.6.3-6), libkpathsea6 (= 2024.20240313.70630+ds-6), libkrb5-3 (= 1.21.3-5), libkrb5-dev (= 1.21.3-5), libkrb5support0 (= 1.21.3-5), liblapack-dev (= 3.12.1-2), liblapack3 (= 3.12.1-2), liblastlog2-2 (= 2.41-4), liblcms2-2 (= 2.16-2), libldap-dev (= 2.6.9+dfsg-2), libldap2 (= 2.6.9+dfsg-2), liblerc-dev (= 4.0.0+ds-5), liblerc4 (= 4.0.0+ds-5), libllvm19 (= 1:19.1.7-3), liblsan0 (= 14.2.0-19), liblzma-dev (= 5.8.1-1), liblzma5 (= 5.8.1-1), liblzo2-2 (= 2.10-3+b1), libmagic-mgc (= 1:5.46-5), libmagic1t64 (= 1:5.46-5), libmd0 (= 1.1.0-2+b1), libmime-charset-perl (= 1.013.1-2), libmount-dev (= 2.41-4), libmount1 (= 2.41-4), libmpc3 (= 1.3.1-1+b3), libmpfi0 (= 1.5.4+ds-4), libmpfr6 (= 4.2.2-1), libncurses-dev (= 6.5+20250216-2), libncurses6 (= 6.5+20250216-2), libncursesw6 (= 6.5+20250216-2), libnettle8t64 (= 3.10.1-1), libnghttp2-14 (= 1.64.0-1.1), libnghttp2-dev (= 1.64.0-1.1), libnghttp3-9 (= 1.8.0-1), libnghttp3-dev (= 1.8.0-1), libnspr4 (= 2:4.36-1), libnss3 (= 2:3.110-1), libp11-kit-dev (= 0.25.5-3), libp11-kit0 (= 0.25.5-3), libpam-modules (= 1.7.0-3), libpam-modules-bin (= 1.7.0-3), libpam-runtime (= 1.7.0-3), libpam-systemd (= 257.5-2), libpam0g (= 1.7.0-3), libpango-1.0-0 (= 1.56.3-1), libpango1.0-dev (= 1.56.3-1), libpangocairo-1.0-0 (= 1.56.3-1), libpangoft2-1.0-0 (= 1.56.3-1), libpangoxft-1.0-0 (= 1.56.3-1), libpaper-utils (= 2.2.5-0.3+b2), libpaper2 (= 2.2.5-0.3+b2), libpcre2-16-0 (= 10.45-1), libpcre2-32-0 (= 10.45-1), libpcre2-8-0 (= 10.45-1), libpcre2-dev (= 10.45-1), libpcre2-posix3 (= 10.45-1), libpcsclite1 (= 2.3.3-1), libpdfbox-java (= 1:1.8.16-5), libperl5.40 (= 5.40.1-3), libpipeline1 (= 1.5.8-1), libpixman-1-0 (= 0.44.0-3), libpixman-1-dev (= 0.44.0-3), libpkgconf3 (= 1.8.1-4), libpng-dev (= 1.6.47-1.1), libpng16-16t64 (= 1.6.47-1.1), libpotrace0 (= 1.16-2+b2), libproc2-0 (= 2:4.0.4-8), libpsl-dev (= 0.21.2-1.1+b1), libpsl5t64 (= 0.21.2-1.1+b1), libptexenc1 (= 2024.20240313.70630+ds-6), libpython3-stdlib (= 3.13.3-1), libpython3.13-minimal (= 3.13.3-2), libpython3.13-stdlib (= 3.13.3-2), libreadline-dev (= 8.2-6), libreadline8t64 (= 8.2-6), librtmp-dev (= 2.4+20151223.gitfa8646d.1-2+b5), librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b5), libsasl2-2 (= 2.1.28+dfsg1-9), libsasl2-modules-db (= 2.1.28+dfsg1-9), libseccomp2 (= 2.6.0-2), libselinux1 (= 3.8.1-1), libselinux1-dev (= 3.8.1-1), libsensors-config (= 1:3.6.2-2), libsensors5 (= 1:3.6.2-2), libsepol-dev (= 3.8.1-1), libsepol2 (= 3.8.1-1), libsframe1 (= 2.44-3), libsharpyuv-dev (= 1.5.0-0.1), libsharpyuv0 (= 1.5.0-0.1), libsm-dev (= 2:1.2.6-1), libsm6 (= 2:1.2.6-1), libsmartcols1 (= 2.41-4), libsombok3 (= 2.4.0-2+b2), libsqlite3-0 (= 3.46.1-3), libssh2-1-dev (= 1.11.1-1), libssh2-1t64 (= 1.11.1-1), libssl-dev (= 3.5.0-1), libssl3t64 (= 3.5.0-1), libstdc++-14-dev (= 14.2.0-19), libstdc++6 (= 14.2.0-19), libsynctex2 (= 2024.20240313.70630+ds-6), libsysprof-capture-4-dev (= 48.0-2), libsystemd-shared (= 257.5-2), libsystemd0 (= 257.5-2), libtasn1-6 (= 4.20.0-2), libtasn1-6-dev (= 4.20.0-2), libtcl8.6 (= 8.6.16+dfsg-1), libteckit0 (= 2.5.12+ds1-1+b1), libtexlua53-5 (= 2024.20240313.70630+ds-6), libtext-charwidth-perl (= 0.04-11+b4), libtext-unidecode-perl (= 1.30-3), libtext-wrapi18n-perl (= 0.06-10), libthai-data (= 0.1.29-2), libthai-dev (= 0.1.29-2+b1), libthai0 (= 0.1.29-2+b1), libtiff-dev (= 4.7.0-3), libtiff6 (= 4.7.0-3), libtiffxx6 (= 4.7.0-3), libtinfo6 (= 6.5+20250216-2), libtirpc-common (= 1.3.6+ds-1), libtirpc-dev (= 1.3.6+ds-1), libtirpc3t64 (= 1.3.6+ds-1), libtk8.6 (= 8.6.16-1), libtool (= 2.5.4-4), libtsan2 (= 14.2.0-19), libubsan1 (= 14.2.0-19), libuchardet0 (= 0.0.8-1+b2), libudev1 (= 257.5-2), libunbound8 (= 1.22.0-1+b1), libunicode-linebreak-perl (= 0.0.20190101-1+b8), libunistring5 (= 1.3-2), libunwind8 (= 1.8.1-0.1), libuuid1 (= 2.41-4), libvulkan1 (= 1.4.309.0-1), libwayland-client0 (= 1.23.1-3), libwayland-cursor0 (= 1.23.1-3), libwayland-egl1 (= 1.23.1-3), libwayland-server0 (= 1.23.1-3), libwebp-dev (= 1.5.0-0.1), libwebp7 (= 1.5.0-0.1), libwebpdecoder3 (= 1.5.0-0.1), libwebpdemux2 (= 1.5.0-0.1), libwebpmux3 (= 1.5.0-0.1), libx11-6 (= 2:1.8.12-1), libx11-data (= 2:1.8.12-1), libx11-dev (= 2:1.8.12-1), libx11-xcb1 (= 2:1.8.12-1), libxau-dev (= 1:1.0.11-1), libxau6 (= 1:1.0.11-1), libxaw7 (= 2:1.0.16-1), libxcb-dri3-0 (= 1.17.0-2+b1), libxcb-glx0 (= 1.17.0-2+b1), libxcb-present0 (= 1.17.0-2+b1), libxcb-randr0 (= 1.17.0-2+b1), libxcb-render0 (= 1.17.0-2+b1), libxcb-render0-dev (= 1.17.0-2+b1), libxcb-shm0 (= 1.17.0-2+b1), libxcb-shm0-dev (= 1.17.0-2+b1), libxcb-sync1 (= 1.17.0-2+b1), libxcb-xfixes0 (= 1.17.0-2+b1), libxcb1 (= 1.17.0-2+b1), libxcb1-dev (= 1.17.0-2+b1), libxcomposite1 (= 1:0.4.6-1), libxcursor1 (= 1:1.2.3-1), libxdamage1 (= 1:1.1.6-1+b2), libxdmcp-dev (= 1:1.1.5-1), libxdmcp6 (= 1:1.1.5-1), libxext-dev (= 2:1.3.4-1+b3), libxext6 (= 2:1.3.4-1+b3), libxfixes3 (= 1:6.0.0-2+b4), libxfont2 (= 1:2.0.6-1+b3), libxft-dev (= 2.3.6-1+b4), libxft2 (= 2.3.6-1+b4), libxi6 (= 2:1.8.2-1), libxinerama1 (= 2:1.1.4-3+b4), libxkbcommon0 (= 1.7.0-2), libxkbfile1 (= 1:1.1.0-1+b4), libxml-libxml-perl (= 2.0207+dfsg+really+2.0134-5+b2), libxml-namespacesupport-perl (= 1.12-2), libxml-sax-base-perl (= 1.09-3), libxml-sax-perl (= 1.02+dfsg-4), libxml2 (= 2.12.7+dfsg+really2.9.14-0.4), libxmu6 (= 2:1.1.3-3+b4), libxmuu1 (= 2:1.1.3-3+b4), libxpm4 (= 1:3.5.17-1+b3), libxrandr2 (= 2:1.5.4-1+b3), libxrender-dev (= 1:0.9.12-1), libxrender1 (= 1:0.9.12-1), libxshmfence1 (= 1.3.3-1), libxss-dev (= 1:1.2.3-1+b3), libxss1 (= 1:1.2.3-1+b3), libxt-dev (= 1:1.2.1-1.2+b2), libxt6t64 (= 1:1.2.1-1.2+b2), libxtst6 (= 2:1.2.5-1), libxxf86vm1 (= 1:1.1.4-1+b4), libyaml-tiny-perl (= 1.76-1), libz3-4 (= 4.13.3-1), libzstd-dev (= 1.5.7+dfsg-1), libzstd1 (= 1.5.7+dfsg-1), libzzip-0-13t64 (= 0.13.78+dfsg.1-0.1), linux-libc-dev (= 6.12.25-1), lmodern (= 2.005-1), m4 (= 1.4.19-8), make (= 4.4.1-2), man-db (= 2.13.0-1), mawk (= 1.3.4.20250131-1), media-types (= 13.0.0), mesa-libgallium (= 25.0.4-1), mount (= 2.41-4), mpack (= 1.6-18+b3), native-architecture (= 0.2.6), ncurses-base (= 6.5+20250216-2), ncurses-bin (= 6.5+20250216-2), netbase (= 6.5), nettle-dev (= 3.10.1-1), openjdk-21-jdk (= 21.0.7+6-1), openjdk-21-jdk-headless (= 21.0.7+6-1), openjdk-21-jre (= 21.0.7+6-1), openjdk-21-jre-headless (= 21.0.7+6-1), openssl (= 3.5.0-1), openssl-provider-legacy (= 3.5.0-1), pango1.0-tools (= 1.56.3-1), patch (= 2.8-1), perl (= 5.40.1-3), perl-base (= 5.40.1-3), perl-modules-5.40 (= 5.40.1-3), pkgconf (= 1.8.1-4), pkgconf-bin (= 1.8.1-4), po-debconf (= 1.0.21+nmu1), preview-latex-style (= 13.2-1), procps (= 2:4.0.4-8), python3 (= 3.13.3-1), python3-minimal (= 3.13.3-1), python3-packaging (= 25.0-1), python3.13 (= 3.13.3-2), python3.13-minimal (= 3.13.3-2), readline-common (= 8.2-6), rpcsvc-proto (= 1.4.3-1+b1), sed (= 4.9-2+b1), sensible-utils (= 0.0.25), shared-mime-info (= 2.4-5+b2), systemd (= 257.5-2), systemd-sysv (= 257.5-2), sysvinit-utils (= 3.14-4), t1utils (= 1.41-4+b1), tar (= 1.35+dfsg-3.1), tcl8.6 (= 8.6.16+dfsg-1), tcl8.6-dev (= 8.6.16+dfsg-1), tex-common (= 6.19), texinfo (= 7.1.1-1), texinfo-lib (= 7.1.1-1+b1), texlive-base (= 2024.20250309-1), texlive-binaries (= 2024.20240313.70630+ds-6), texlive-extra-utils (= 2024.20250309-2), texlive-fonts-extra (= 2024.20250309-2), texlive-fonts-recommended (= 2024.20250309-1), texlive-latex-base (= 2024.20250309-1), texlive-latex-extra (= 2024.20250309-2), texlive-latex-recommended (= 2024.20250309-1), texlive-luatex (= 2024.20250309-1), texlive-pictures (= 2024.20250309-1), texlive-plain-generic (= 2024.20250309-2), tk8.6 (= 8.6.16-1), tk8.6-dev (= 8.6.16-1), tzdata (= 2025b-2), ucf (= 3.0051), util-linux (= 2.41-4), uuid-dev (= 2.41-4), x11-common (= 1:7.7+24), x11-xkb-utils (= 7.7+9), x11proto-core-dev (= 2024.1-1), x11proto-dev (= 2024.1-1), xauth (= 1:1.1.2-1.1), xdg-utils (= 1.2.1-2), xfonts-base (= 1:1.0.5+nmu1), xfonts-encodings (= 1:1.0.4-2.2), xfonts-utils (= 1:7.7+7), xkb-data (= 2.42-1), xorg-sgml-doctools (= 1:1.11-1.1), xserver-common (= 2:21.1.16-1), 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Architecture: arm64 Maintainer: Dirk Eddelbuettel Installed-Size: 46639 Depends: zip, unzip, libpaper-utils, xdg-utils, libblas3 | libblas.so.3, libbz2-1.0, libc6 (>= 2.41), libcairo2 (>= 1.6.0), libcurl4t64 (>= 7.28.0), libdeflate0 (>= 1.0), libglib2.0-0t64 (>= 2.12.0), libgomp1 (>= 4.9), libicu76 (>= 76.1-1~), libjpeg62-turbo (>= 1.3.1), liblapack3 | liblapack.so.3, liblzma5 (>= 5.1.1alpha+20120614), libpango-1.0-0 (>= 1.18.0), libpangocairo-1.0-0 (>= 1.14.0), libpcre2-8-0 (>= 10.22), libpng16-16t64 (>= 1.6.46), libreadline8t64 (>= 6.0), libtcl8.6 (>= 8.6.0), libtiff6 (>= 4.0.3), libtirpc3t64 (>= 1.0.2), libtk8.6 (>= 8.6.0), libx11-6, libxt6t64, libzstd1 (>= 1.5.5), zlib1g (>= 1:1.1.4), ucf (>= 3.0), ca-certificates Recommends: r-recommended, r-base-dev, r-doc-html Suggests: elpa-ess, r-doc-info | r-doc-pdf, r-mathlib, r-base-html Breaks: r-bioc-bioccheck (<< 1.42.1+dfsg-2~), r-bioc-graph (<< 1.84.1-2~), r-bioc-iranges (<< 2.40.1-3~), r-bioc-pwalign (<< 1.2.0-3~), r-cran-rlang (<< 1.1.5-2~), r-cran-testthat (<< 3.2.3~) Replaces: r-base (<= 1.4.1-1), r-recommended (<< 1.9.0) Provides: r-api-4.0, r-graphics-engine-16 Section: gnu-r Priority: optional Homepage: http://www.r-project.org/ Description: GNU R core of statistical computation and graphics system R is a system for statistical computation and graphics. It consists of a language plus a run-time environment with graphics, a debugger, access to certain system functions, and the ability to run programs stored in script files. . The design of R has been heavily influenced by two existing languages: Becker, Chambers & Wilks' S and Sussman's Scheme. Whereas the resulting language is very similar in appearance to S, the underlying implementation and semantics are derived from Scheme. . The core of R is an interpreted computer language which allows branching and looping as well as modular programming using functions. Most of the user-visible functions in R are written in R. It is possible for the user to interface to procedures written in the C, C++, or FORTRAN languages for efficiency, and many of R's core functions do so. The R distribution contains functionality for a large number of statistical procedures and underlying applied math computations. There is also a large set of functions which provide a flexible graphical environment for creating various kinds of data presentations. . Additionally, several thousand extension "packages" are available from CRAN, the Comprehensive R Archive Network, many also as Debian packages, named 'r-cran-'. . This package provides the core GNU R system from which only the optional documentation packages r-base-html, r-doc-html, r-doc-pdf and r-doc-info have been split off to somewhat reduce the size of this package. drwxr-xr-x root/root 0 2025-04-29 21:56 ./ drwxr-xr-x root/root 0 2025-04-29 21:56 ./etc/ drwxr-xr-x root/root 0 2025-04-29 21:56 ./etc/R/ -rw-r--r-- root/root 11372 2025-04-29 21:56 ./etc/R/Makeconf -rw-r--r-- root/root 1983 2025-04-29 21:56 ./etc/R/Renviron.site -rw-r--r-- root/root 988 2025-04-29 21:56 ./etc/R/Rprofile.site -rw-r--r-- root/root 785 2025-04-29 21:56 ./etc/R/ldpaths -rw-r--r-- root/root 1179 2025-04-29 21:56 ./etc/R/repositories drwxr-xr-x root/root 0 2025-04-29 21:56 ./etc/ld.so.conf.d/ drwxr-xr-x root/root 0 2025-04-29 21:56 ./usr/ drwxr-xr-x root/root 0 2025-04-29 21:56 ./usr/bin/ -rwxr-xr-x root/root 9061 2025-04-29 21:56 ./usr/bin/R -rwxr-xr-x root/root 67840 2025-04-29 21:56 ./usr/bin/Rscript drwxr-xr-x root/root 0 2025-04-29 21:56 ./usr/lib/ drwxr-xr-x root/root 0 2025-04-29 21:56 ./usr/lib/R/ lrwxrwxrwx root/root 0 2025-04-29 21:56 ./usr/lib/R/COPYING -> ../../share/common-licenses/GPL-2 -rw-r--r-- root/root 46 2025-04-29 21:56 ./usr/lib/R/SVN-REVISION drwxr-xr-x root/root 0 2025-04-29 21:56 ./usr/lib/R/bin/ -rwxr-xr-x root/root 1838 2025-04-29 21:56 ./usr/lib/R/bin/BATCH -rwxr-xr-x root/root 2168 2025-04-29 21:56 ./usr/lib/R/bin/COMPILE -rwxr-xr-x root/root 825 2025-04-29 21:56 ./usr/lib/R/bin/INSTALL -rwxr-xr-x root/root 1324 2025-04-29 21:56 ./usr/lib/R/bin/LINK -rwxr-xr-x root/root 9061 2025-04-29 21:56 ./usr/lib/R/bin/R -rwxr-xr-x root/root 160 2025-04-29 21:56 ./usr/lib/R/bin/REMOVE -rwxr-xr-x root/root 1428 2025-04-29 21:56 ./usr/lib/R/bin/Rcmd -rwxr-xr-x root/root 318 2025-04-29 21:56 ./usr/lib/R/bin/Rd2pdf -rwxr-xr-x root/root 361 2025-04-29 21:56 ./usr/lib/R/bin/Rdconv -rwxr-xr-x root/root 260 2025-04-29 21:56 ./usr/lib/R/bin/Rdiff -rwxr-xr-x root/root 312 2025-04-29 21:56 ./usr/lib/R/bin/Rprof -rwxr-xr-x root/root 67840 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./usr/lib/R/etc/Makeconf -> /etc/R/Makeconf lrwxrwxrwx root/root 0 2025-04-29 21:56 ./usr/lib/R/etc/Renviron -> /etc/R/Renviron lrwxrwxrwx root/root 0 2025-04-29 21:56 ./usr/lib/R/etc/Renviron.site -> /etc/R/Renviron.site -rw-r--r-- root/root 2182 2025-04-29 21:56 ./usr/lib/R/etc/Renviron.ucf lrwxrwxrwx root/root 0 2025-04-29 21:56 ./usr/lib/R/etc/Rprofile.site -> /etc/R/Rprofile.site -rw-r--r-- root/root 234 2025-04-29 21:56 ./usr/lib/R/etc/javaconf lrwxrwxrwx root/root 0 2025-04-29 21:56 ./usr/lib/R/etc/ldpaths -> /etc/R/ldpaths lrwxrwxrwx root/root 0 2025-04-29 21:56 ./usr/lib/R/etc/repositories -> /etc/R/repositories drwxr-xr-x root/root 0 2025-04-29 21:56 ./usr/lib/R/lib/ -rw-r--r-- root/root 3599016 2025-04-29 21:56 ./usr/lib/R/lib/libR.so drwxr-xr-x root/root 0 2025-04-29 21:56 ./usr/lib/R/library/ drwxr-xr-x root/root 0 2025-04-29 21:56 ./usr/lib/R/library/base/ -rw-r--r-- root/root 643 2025-04-29 21:56 ./usr/lib/R/library/base/CITATION -rw-r--r-- root/root 383 2025-04-29 21:56 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It consists of a language plus a run-time environment with graphics, a debugger, access to certain system functions, and the ability to run programs stored in script files. . The design of R has been heavily influenced by two existing languages: Becker, Chambers & Wilks' S and Sussman's Scheme. Whereas the resulting language is very similar in appearance to S, the underlying implementation and semantics are derived from Scheme. . The core of R is an interpreted computer language which allows branching and looping as well as modular programming using functions. Most of the user-visible functions in R are written in R. It is possible for the user to interface to procedures written in the C, C++, or FORTRAN languages for efficiency, and many of R's core functions do so. The R distribution contains functionality for a large number of statistical procedures and underlying applied math computations. There is also a large set of functions which provide a flexible graphical environment for creating various kinds of data presentations. . Additionally, several thousand extension "packages" are available from CRAN, the Comprehensive R Archive Network, many also as Debian packages, named 'r-cran-'. . This package provides the libRmath shared and static libraries which can be called from standalone C or C++ code. drwxr-xr-x root/root 0 2025-04-29 21:56 ./ drwxr-xr-x root/root 0 2025-04-29 21:56 ./usr/ drwxr-xr-x root/root 0 2025-04-29 21:56 ./usr/include/ -rw-r--r-- root/root 20224 2025-04-29 21:56 ./usr/include/Rmath.h drwxr-xr-x root/root 0 2025-04-29 21:56 ./usr/lib/ -rw-r--r-- root/root 460356 2025-04-29 21:56 ./usr/lib/libRmath.a lrwxrwxrwx root/root 0 2025-04-29 21:56 ./usr/lib/libRmath.so -> libRmath.so.1 lrwxrwxrwx root/root 0 2025-04-29 21:56 ./usr/lib/libRmath.so.1 -> libRmath.so.1.0.0 -rw-r--r-- root/root 265024 2025-04-29 21:56 ./usr/lib/libRmath.so.1.0.0 drwxr-xr-x root/root 0 2025-04-29 21:56 ./usr/lib/pkgconfig/ -rw-r--r-- root/root 173 2025-04-29 21:56 ./usr/lib/pkgconfig/libRmath.pc drwxr-xr-x root/root 0 2025-04-29 21:56 ./usr/share/ drwxr-xr-x root/root 0 2025-04-29 21:56 ./usr/share/doc/ drwxr-xr-x root/root 0 2025-04-29 21:56 ./usr/share/doc/r-mathlib/ -rw-r--r-- root/root 35933 2024-12-04 14:08 ./usr/share/doc/r-mathlib/NEWS.0.gz -rw-r--r-- root/root 108741 2024-12-04 14:08 ./usr/share/doc/r-mathlib/NEWS.1.gz -rw-r--r-- root/root 96634 2025-03-13 23:02 ./usr/share/doc/r-mathlib/NEWS.2.Rd.gz -rw-r--r-- root/root 229623 2025-03-13 23:02 ./usr/share/doc/r-mathlib/NEWS.2.gz -rw-r--r-- root/root 397731 2025-04-29 21:56 ./usr/share/doc/r-mathlib/NEWS.2.rds.gz -rw-r--r-- root/root 122205 2025-03-13 23:02 ./usr/share/doc/r-mathlib/NEWS.3.Rd.gz -rw-r--r-- root/root 113053 2025-03-13 23:02 ./usr/share/doc/r-mathlib/NEWS.3.gz -rw-r--r-- root/root 515218 2025-04-29 21:56 ./usr/share/doc/r-mathlib/NEWS.3.rds.gz -rw-r--r-- root/root 88583 2025-04-04 22:15 ./usr/share/doc/r-mathlib/NEWS.Rd.gz lrwxrwxrwx root/root 0 2025-04-29 21:56 ./usr/share/doc/r-mathlib/NEWS.gz -> changelog.gz -rw-r--r-- root/root 376065 2025-04-29 21:56 ./usr/share/doc/r-mathlib/NEWS.pdf.gz -rw-r--r-- root/root 378113 2025-04-29 21:56 ./usr/share/doc/r-mathlib/NEWS.rds.gz -rw-r--r-- root/root 2119 2025-04-01 22:15 ./usr/share/doc/r-mathlib/README.gz -rw-r--r-- root/root 3026 2024-04-10 20:08 ./usr/share/doc/r-mathlib/README.mathlib -rw-r--r-- root/root 5238 2025-04-29 21:56 ./usr/share/doc/r-mathlib/changelog.Debian.gz -rw-r--r-- root/root 81260 2025-04-29 21:56 ./usr/share/doc/r-mathlib/changelog.gz -rw-r--r-- root/root 20761 2024-04-10 20:08 ./usr/share/doc/r-mathlib/copyright drwxr-xr-x root/root 0 2025-04-29 21:56 ./usr/share/doc/r-mathlib/examples/ -rw-r--r-- root/root 1692 2025-03-13 23:02 ./usr/share/doc/r-mathlib/examples/test.c drwxr-xr-x root/root 0 2025-04-29 21:56 ./usr/share/lintian/ drwxr-xr-x root/root 0 2025-04-29 21:56 ./usr/share/lintian/overrides/ -rw-r--r-- root/root 364 2024-04-10 20:08 ./usr/share/lintian/overrides/r-mathlib +------------------------------------------------------------------------------+ | Post Build Mon, 21 Jul 2025 15:36:35 +0000 | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup Mon, 21 Jul 2025 15:36:35 +0000 | +------------------------------------------------------------------------------+ Purging /build/reproducible-path Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary Mon, 21 Jul 2025 15:36:40 +0000 | +------------------------------------------------------------------------------+ Build Architecture: arm64 Build Type: any Build-Space: 388552 Build-Time: 678 Distribution: unstable Host Architecture: arm64 Install-Time: 6 Job: /srv/rebuilderd/tmp/rebuilderdslyB5w/inputs/r-base_4.5.0-3.dsc Machine Architecture: arm64 Package: r-base Package-Time: 709 Source-Version: 4.5.0-3 Space: 388552 Status: successful Version: 4.5.0-3 -------------------------------------------------------------------------------- Finished at 2025-07-21T15:36:27Z Build needed 00:11:49, 388552k disk space build artifacts stored in /srv/rebuilderd/tmp/rebuilderdslyB5w/out size differs for r-base-core_4.5.0-3_arm64.deb checking r-base-core-dbgsym_4.5.0-3_arm64.deb: size... sha1... sha256... md5... all OK checking r-base-core_4.5.0-3_arm64.deb: