=============================================================================== About this build: this rebuild has been done as part of reproduce.debian.net where we aim to reproduce Debian binary packages distributed via ftp.debian.org, by rebuilding using the exact same packages as the original build on the buildds, as described in the relevant .buildinfo file from buildinfos.debian.net. For more information please go to https://reproduce.debian.net or join #debian-reproducible on irc.debian.org =============================================================================== Preparing download of sources for /srv/rebuilderd/tmp/rebuilderd0EwZRe/inputs/seqan2_2.5.2-1_arm64.buildinfo Source: seqan2 Version: 2.5.2-1 rebuilderd-worker node: codethink02-arm64 +------------------------------------------------------------------------------+ | Downloading sources Wed, 14 Jan 2026 20:57:25 +0000 | +------------------------------------------------------------------------------+ Get:1 https://deb.debian.org/debian trixie InRelease [140 kB] Get:2 https://deb.debian.org/debian-security trixie-security InRelease [43.4 kB] Get:3 https://deb.debian.org/debian trixie-updates InRelease [47.3 kB] Get:4 https://deb.debian.org/debian trixie-proposed-updates InRelease [57.6 kB] Get:5 https://deb.debian.org/debian trixie-backports InRelease [54.0 kB] Get:6 https://deb.debian.org/debian forky InRelease [137 kB] Get:7 https://deb.debian.org/debian sid InRelease [187 kB] Get:8 https://deb.debian.org/debian experimental InRelease [91.1 kB] Get:9 https://deb.debian.org/debian trixie/main Sources [10.5 MB] Get:10 https://deb.debian.org/debian trixie/non-free-firmware Sources [6552 B] Get:11 https://deb.debian.org/debian-security trixie-security/main Sources [118 kB] Get:12 https://deb.debian.org/debian-security trixie-security/non-free-firmware Sources [696 B] Get:13 https://deb.debian.org/debian trixie-updates/main Sources [2788 B] Get:14 https://deb.debian.org/debian trixie-proposed-updates/main Sources [10.5 kB] Get:15 https://deb.debian.org/debian trixie-backports/main Sources [126 kB] Get:16 https://deb.debian.org/debian trixie-backports/non-free-firmware Sources [2468 B] Get:17 https://deb.debian.org/debian forky/main Sources [10.6 MB] Get:18 https://deb.debian.org/debian forky/non-free-firmware Sources [7700 B] Get:19 https://deb.debian.org/debian sid/main Sources [11.2 MB] Get:20 https://deb.debian.org/debian sid/non-free-firmware Sources [9688 B] Get:21 https://deb.debian.org/debian experimental/main Sources [388 kB] Get:22 https://deb.debian.org/debian experimental/non-free-firmware Sources [3180 B] Fetched 33.8 MB in 31s (1094 kB/s) Reading package lists... 'https://deb.debian.org/debian/pool/main/s/seqan2/seqan2_2.5.2-1.dsc' seqan2_2.5.2-1.dsc 2271 SHA256:85eaf448568a518a1839d879b57b7c048f163e4a9d12340147d5fe617159f4b9 'https://deb.debian.org/debian/pool/main/s/seqan2/seqan2_2.5.2.orig.tar.xz' seqan2_2.5.2.orig.tar.xz 84960384 SHA256:1a1c19a548490c59172c19a096ef2fe97136445dc0faea3227c389319c589439 'https://deb.debian.org/debian/pool/main/s/seqan2/seqan2_2.5.2-1.debian.tar.xz' seqan2_2.5.2-1.debian.tar.xz 13676 SHA256:407a1303c9fe6d73587b29154f5efd044a58f4d153584add8672000d8237b3d1 1a1c19a548490c59172c19a096ef2fe97136445dc0faea3227c389319c589439 seqan2_2.5.2.orig.tar.xz 407a1303c9fe6d73587b29154f5efd044a58f4d153584add8672000d8237b3d1 seqan2_2.5.2-1.debian.tar.xz 85eaf448568a518a1839d879b57b7c048f163e4a9d12340147d5fe617159f4b9 seqan2_2.5.2-1.dsc +------------------------------------------------------------------------------+ | Calling debrebuild Wed, 14 Jan 2026 20:57:59 +0000 | +------------------------------------------------------------------------------+ Rebuilding seqan2=2.5.2-1 in /srv/rebuilderd/tmp/rebuilderd0EwZRe/inputs now. + nice /usr/bin/debrebuild --buildresult=/srv/rebuilderd/tmp/rebuilderd0EwZRe/out --builder=sbuild+unshare --cache=/srv/rebuilderd/cache -- /srv/rebuilderd/tmp/rebuilderd0EwZRe/inputs/seqan2_2.5.2-1_arm64.buildinfo /srv/rebuilderd/tmp/rebuilderd0EwZRe/inputs/seqan2_2.5.2-1_arm64.buildinfo contains a GPG signature which has NOT been validated Using defined Build-Path: /build/reproducible-path/seqan2-2.5.2 I: verifying dsc... successful! Get:1 http://deb.debian.org/debian unstable InRelease [187 kB] Get:2 http://snapshot.debian.org/archive/debian/20260111T142729Z sid InRelease [187 kB] Get:3 http://deb.debian.org/debian unstable/main arm64 Packages [10.1 MB] Get:4 http://snapshot.debian.org/archive/debian/20260111T142729Z sid/main arm64 Packages [10.1 MB] Fetched 20.6 MB in 2s (11.0 MB/s) Reading package lists... W: http://snapshot.debian.org/archive/debian/20260111T142729Z/dists/sid/InRelease: Loading /etc/apt/trusted.gpg from deprecated option Dir::Etc::Trusted Get:1 http://deb.debian.org/debian unstable/main arm64 libjsoncpp26 arm64 1.9.6-5 [72.4 kB] Fetched 72.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjvj17p6s/libjsoncpp26_1.9.6-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libperl5.40 arm64 5.40.1-7 [4134 kB] Fetched 4134 kB in 0s (174 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjd86j3pu/libperl5.40_5.40.1-7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 liblz4-1 arm64 1.10.0-6 [66.7 kB] Fetched 66.7 kB in 0s (3683 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd942bot7/liblz4-1_1.10.0-6_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 openssl-provider-legacy arm64 3.5.4-1 [306 kB] Fetched 306 kB in 0s (30.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp43dgoajy/openssl-provider-legacy_3.5.4-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 rpcsvc-proto arm64 1.4.3-1+b1 [60.5 kB] Fetched 60.5 kB in 0s (5681 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp77csm59v/rpcsvc-proto_1.4.3-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 cmake-data all 4.1.1+really3.31.6-2 [2268 kB] Fetched 2268 kB in 0s (86.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6yymk6ig/cmake-data_4.1.1+really3.31.6-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libselinux1 arm64 3.9-4+b1 [80.8 kB] Fetched 80.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsp1ztiy1/libselinux1_3.9-4+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 base-files arm64 14 [72.9 kB] Fetched 72.9 kB in 0s (4324 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxm_t7pzp/base-files_14_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 base-passwd arm64 3.6.8 [54.0 kB] Fetched 54.0 kB in 0s (3227 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuqdwk6z5/base-passwd_3.6.8_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libudev1 arm64 259-1 [148 kB] Fetched 148 kB in 0s (8475 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxiz6y8t1/libudev1_259-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgomp1 arm64 15.2.0-12 [126 kB] Fetched 126 kB in 0s (7238 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp802m4_88/libgomp1_15.2.0-12_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libk5crypto3 arm64 1.22.1-2 [77.1 kB] Fetched 77.1 kB in 0s (4571 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmk3zxcl7/libk5crypto3_1.22.1-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 gcc-aarch64-linux-gnu arm64 4:15.2.0-4 [1432 B] Fetched 1432 B in 0s (88.2 kB/s) dpkg-name: info: moved 'gcc-aarch64-linux-gnu_4%3a15.2.0-4_arm64.deb' to '/srv/rebuilderd/tmp/tmpv47sj_o2/gcc-aarch64-linux-gnu_15.2.0-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libfile-stripnondeterminism-perl all 1.15.0-1 [19.9 kB] Fetched 19.9 kB in 0s (1260 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9qnvidzj/libfile-stripnondeterminism-perl_1.15.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libmagic-mgc arm64 1:5.46-5 [338 kB] Fetched 338 kB in 0s (17.3 MB/s) dpkg-name: info: moved 'libmagic-mgc_1%3a5.46-5_arm64.deb' to '/srv/rebuilderd/tmp/tmpdknfnd0h/libmagic-mgc_5.46-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 linux-libc-dev all 6.18.3-1 [2548 kB] Fetched 2548 kB in 0s (67.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptdqcg5ln/linux-libc-dev_6.18.3-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 cpp-aarch64-linux-gnu arm64 4:15.2.0-4 [5288 B] Fetched 5288 B in 0s (286 kB/s) dpkg-name: info: moved 'cpp-aarch64-linux-gnu_4%3a15.2.0-4_arm64.deb' to '/srv/rebuilderd/tmp/tmpvkaycrac/cpp-aarch64-linux-gnu_15.2.0-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 bsdextrautils arm64 2.41.3-3 [97.7 kB] Fetched 97.7 kB in 0s (5614 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps8tbnnt3/bsdextrautils_2.41.3-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libitm1 arm64 15.2.0-12 [24.1 kB] Fetched 24.1 kB in 0s (1458 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm9pb06gy/libitm1_15.2.0-12_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 sed arm64 4.9-2+b1 [326 kB] Fetched 326 kB in 0s (17.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoag63m1d/sed_4.9-2+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libbz2-1.0 arm64 1.0.8-6 [37.8 kB] Fetched 37.8 kB in 0s (2197 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn7sus3mr/libbz2-1.0_1.0.8-6_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 tar arm64 1.35+dfsg-3.1 [802 kB] Fetched 802 kB in 0s (36.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0olnok3n/tar_1.35+dfsg-3.1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 zlib1g arm64 1:1.3.dfsg+really1.3.1-1+b2 [85.9 kB] Fetched 85.9 kB in 0s (4957 kB/s) dpkg-name: info: moved 'zlib1g_1%3a1.3.dfsg+really1.3.1-1+b2_arm64.deb' to '/srv/rebuilderd/tmp/tmpr4pliar2/zlib1g_1.3.dfsg+really1.3.1-1+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 man-db arm64 2.13.1-1 [1453 kB] Fetched 1453 kB in 0s (52.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpevnt_aoh/man-db_2.13.1-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg1-10 [19.8 kB] Fetched 19.8 kB in 0s (1199 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo11we65w/libsasl2-modules-db_2.1.28+dfsg1-10_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpam-runtime all 1.7.0-5 [249 kB] Fetched 249 kB in 0s (13.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp57vltlvm/libpam-runtime_1.7.0-5_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libnghttp3-9 arm64 1.12.0-1 [63.6 kB] Fetched 63.6 kB in 0s (3670 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnek8wkpy/libnghttp3-9_1.12.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libboost-dev arm64 1.83.0.2+b2 [3828 B] Fetched 3828 B in 0s (231 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx6wr1zas/libboost-dev_1.83.0.2+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 automake all 1:1.18.1-3 [878 kB] Fetched 878 kB in 0s (37.9 MB/s) dpkg-name: info: moved 'automake_1%3a1.18.1-3_all.deb' to '/srv/rebuilderd/tmp/tmp2a772499/automake_1.18.1-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 dh-strip-nondeterminism all 1.15.0-1 [8812 B] Fetched 8812 B in 0s (543 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpaviw8_zx/dh-strip-nondeterminism_1.15.0-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T142729Z sid/main arm64 libpython3-stdlib arm64 3.13.9-2 [10.5 kB] Fetched 10.5 kB in 0s (642 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpycsle6ju/libpython3-stdlib_3.13.9-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 binutils-common arm64 2.45.50.20251209-1 [2541 kB] Fetched 2541 kB in 0s (69.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb9e3m66a/binutils-common_2.45.50.20251209-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 gettext arm64 0.23.2-1 [1613 kB] Fetched 1613 kB in 0s (51.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp61mhni3f/gettext_0.23.2-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libdpkg-perl all 1.23.3 [657 kB] Fetched 657 kB in 0s (39.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvginadkj/libdpkg-perl_1.23.3_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgnutls30t64 arm64 3.8.11-3 [1400 kB] Fetched 1400 kB in 0s (104 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkbuokg82/libgnutls30t64_3.8.11-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 ncurses-bin arm64 6.6+20251231-1 [438 kB] Fetched 438 kB in 0s (42.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxhe8w7fr/ncurses-bin_6.6+20251231-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpam-modules-bin arm64 1.7.0-5 [48.3 kB] Fetched 48.3 kB in 0s (4634 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyz941686/libpam-modules-bin_1.7.0-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libtasn1-6 arm64 4.20.0-2 [47.3 kB] Fetched 47.3 kB in 0s (4315 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcjagafg4/libtasn1-6_4.20.0-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Fetched 22.9 kB in 0s (2286 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplh4yjcfa/intltool-debian_0.35.0+20060710.6_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 cmake arm64 4.1.1+really3.31.6-2 [10.1 MB] Fetched 10.1 MB in 0s (208 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpruciv343/cmake_4.1.1+really3.31.6-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libldap2 arm64 2.6.10+dfsg-1 [179 kB] Fetched 179 kB in 0s (10.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps0wyqyri/libldap2_2.6.10+dfsg-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 g++-15-aarch64-linux-gnu arm64 15.2.0-12 [11.1 MB] Fetched 11.1 MB in 0s (144 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp228dlhjn/g++-15-aarch64-linux-gnu_15.2.0-12_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpython3.13-minimal arm64 3.13.11-1+b1 [859 kB] Fetched 859 kB in 0s (68.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4ervql6s/libpython3.13-minimal_3.13.11-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libexpat1 arm64 2.7.3-1 [96.5 kB] Fetched 96.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo4coc2tt/libexpat1_2.7.3-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libunistring5 arm64 1.3-2 [453 kB] Fetched 453 kB in 0s (40.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb31kq2j9/libunistring5_1.3-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 xz-utils arm64 5.8.2-1 [703 kB] Fetched 703 kB in 0s (59.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2vw7xios/xz-utils_5.8.2-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 autoconf all 2.72-3.1 [494 kB] Fetched 494 kB in 0s (37.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj980n0as/autoconf_2.72-3.1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 dpkg arm64 1.23.3 [1501 kB] Fetched 1501 kB in 0s (103 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxg0ns52w/dpkg_1.23.3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 gettext-base arm64 0.23.2-1 [242 kB] Fetched 242 kB in 0s (24.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpli_4k7om/gettext-base_0.23.2-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libngtcp2-16 arm64 1.16.0-1 [123 kB] Fetched 123 kB in 0s (8831 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6g7jl28c/libngtcp2-16_1.16.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libsasl2-2 arm64 2.1.28+dfsg1-10 [55.0 kB] Fetched 55.0 kB in 0s (4818 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjaxlqm18/libsasl2-2_2.1.28+dfsg1-10_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T142729Z sid/main arm64 libarchive13t64 arm64 3.8.4-1 [329 kB] Fetched 329 kB in 0s (23.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpf7s6i2h1/libarchive13t64_3.8.4-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libngtcp2-crypto-ossl0 arm64 1.16.0-1 [25.7 kB] Fetched 25.7 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgk0qlnqh/libngtcp2-crypto-ossl0_1.16.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 architecture-properties arm64 0.2.6 [2336 B] Fetched 2336 B in 0s (209 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr8fk_c4b/architecture-properties_0.2.6_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 g++ arm64 4:15.2.0-4 [1332 B] Fetched 1332 B in 0s (37.5 kB/s) dpkg-name: info: moved 'g++_4%3a15.2.0-4_arm64.deb' to '/srv/rebuilderd/tmp/tmps251_w2f/g++_15.2.0-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 autotools-dev all 20240727.1 [60.2 kB] Fetched 60.2 kB in 0s (4708 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptrb2vtgt/autotools-dev_20240727.1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libproc2-0 arm64 2:4.0.4-9 [62.8 kB] Fetched 62.8 kB in 0s (6217 kB/s) dpkg-name: info: moved 'libproc2-0_2%3a4.0.4-9_arm64.deb' to '/srv/rebuilderd/tmp/tmplg6_ufml/libproc2-0_4.0.4-9_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxxhash0 arm64 0.8.3-2 [22.3 kB] Fetched 22.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzxj466l7/libxxhash0_0.8.3-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libssh2-1t64 arm64 1.11.1-1 [235 kB] Fetched 235 kB in 0s (21.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpahhl0mdb/libssh2-1t64_1.11.1-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3.13 arm64 3.13.11-1+b1 [770 kB] Fetched 770 kB in 0s (61.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbynxpom5/python3.13_3.13.11-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 ncurses-base all 6.6+20251231-1 [277 kB] Fetched 277 kB in 0s (24.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp43lqskn/ncurses-base_6.6+20251231-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpipeline1 arm64 1.5.8-2 [40.3 kB] Fetched 40.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplc7vyz5r/libpipeline1_1.5.8-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxml2-16 arm64 2.15.1+dfsg-2+b1 [591 kB] Fetched 591 kB in 0s (52.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb5vgbo5s/libxml2-16_2.15.1+dfsg-2+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libbrotli1 arm64 1.1.0-2+b9 [295 kB] Fetched 295 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpopcdi24r/libbrotli1_1.1.0-2+b9_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libelf1t64 arm64 0.194-1 [184 kB] Fetched 184 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7cw83ef8/libelf1t64_0.194-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libuv1t64 arm64 1.51.0-2 [150 kB] Fetched 150 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpysn_p2xb/libuv1t64_1.51.0-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libtinfo6 arm64 6.6+20251231-1 [346 kB] Fetched 346 kB in 0s (30.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpefr8znfg/libtinfo6_6.6+20251231-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libmd0 arm64 1.1.0-2+b1 [33.7 kB] Fetched 33.7 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3_8jz8cb/libmd0_1.1.0-2+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 grep arm64 3.12-1 [440 kB] Fetched 440 kB in 0s (40.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgtnylxcn/grep_3.12-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 dpkg-dev all 1.23.3 [1318 kB] Fetched 1318 kB in 0s (93.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn1mc3h_4/dpkg-dev_1.23.3_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 file arm64 1:5.46-5 [43.7 kB] Fetched 43.7 kB in 0s (674 kB/s) dpkg-name: info: moved 'file_1%3a5.46-5_arm64.deb' to '/srv/rebuilderd/tmp/tmpq1ij6hf0/file_5.46-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libncursesw6 arm64 6.6+20251231-1 [125 kB] Fetched 125 kB in 0s (11.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb0a5wkfw/libncursesw6_6.6+20251231-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 liblsan0 arm64 15.2.0-12 [1194 kB] Fetched 1194 kB in 0s (79.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxe49wanl/liblsan0_15.2.0-12_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 debconf all 1.5.91 [121 kB] Fetched 121 kB in 0s (6836 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8bvryqdx/debconf_1.5.91_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 binutils-aarch64-linux-gnu arm64 2.45.50.20251209-1 [858 kB] Fetched 858 kB in 0s (34.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9ot7ztlb/binutils-aarch64-linux-gnu_2.45.50.20251209-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libssl3t64 arm64 3.5.4-1 [2725 kB] Fetched 2725 kB in 0s (117 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqb63o89r/libssl3t64_3.5.4-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgcc-s1 arm64 15.2.0-12 [53.4 kB] Fetched 53.4 kB in 0s (4174 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu2tqbsni/libgcc-s1_15.2.0-12_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libhogweed6t64 arm64 3.10.2-1 [332 kB] Fetched 332 kB in 0s (24.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpe0r1d4e9/libhogweed6t64_3.10.2-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libp11-kit0 arm64 0.25.10-1 [420 kB] Fetched 420 kB in 0s (37.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpon24s885/libp11-kit0_0.25.10-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 readline-common all 8.3-3 [74.8 kB] Fetched 74.8 kB in 0s (6086 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkmlur50s/readline-common_8.3-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 cpp-15-aarch64-linux-gnu arm64 15.2.0-12 [10.1 MB] Fetched 10.1 MB in 0s (219 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmuq9u5b6/cpp-15-aarch64-linux-gnu_15.2.0-12_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 librhash1 arm64 1.4.6-1.1 [128 kB] Fetched 128 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbv8t236v/librhash1_1.4.6-1.1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 netbase all 6.5 [12.4 kB] Fetched 12.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmperh__bqq/netbase_6.5_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libcap-ng0 arm64 0.8.5-4+b2 [17.0 kB] Fetched 17.0 kB in 0s (1475 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkfcb20hx/libcap-ng0_0.8.5-4+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libctf-nobfd0 arm64 2.45.50.20251209-1 [154 kB] Fetched 154 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjsdhg699/libctf-nobfd0_2.45.50.20251209-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libc-gconv-modules-extra arm64 2.42-7 [1158 kB] Fetched 1158 kB in 0s (74.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5z6bz6yl/libc-gconv-modules-extra_2.42-7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpcre2-8-0 arm64 10.46-1 [262 kB] Fetched 262 kB in 0s (25.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpho0b8tu4/libpcre2-8-0_10.46-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 perl-base arm64 5.40.1-7 [1528 kB] Fetched 1528 kB in 0s (87.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpql2wlp_4/perl-base_5.40.1-7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libboost1.83-dev arm64 1.83.0-5+b1 [10.6 MB] Fetched 10.6 MB in 0s (155 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb_a2oo63/libboost1.83-dev_1.83.0-5+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libacl1 arm64 2.3.2-2+b1 [32.2 kB] Fetched 32.2 kB in 0s (2841 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp42ouz2l0/libacl1_2.3.2-2+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libuuid1 arm64 2.41.3-3 [38.2 kB] Fetched 38.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp260s5cbs/libuuid1_2.41.3-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libhwasan0 arm64 15.2.0-12 [1479 kB] Fetched 1479 kB in 0s (93.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_kty6xn1/libhwasan0_15.2.0-12_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 binutils arm64 2.45.50.20251209-1 [278 kB] Fetched 278 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnv8lyrnp/binutils_2.45.50.20251209-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 util-linux arm64 2.41.3-3 [1123 kB] Fetched 1123 kB in 0s (87.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpidij1y7x/util-linux_2.41.3-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 bzip2 arm64 1.0.8-6 [39.5 kB] Fetched 39.5 kB in 0s (3856 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5i8mc45j/bzip2_1.0.8-6_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 gcc arm64 4:15.2.0-4 [5156 B] Fetched 5156 B in 0s (0 B/s) dpkg-name: info: moved 'gcc_4%3a15.2.0-4_arm64.deb' to '/srv/rebuilderd/tmp/tmphvba357h/gcc_15.2.0-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 hostname arm64 3.25 [10.8 kB] Fetched 10.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5w19y2pd/hostname_3.25_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 gcc-15-aarch64-linux-gnu arm64 15.2.0-12 [19.6 MB] Fetched 19.6 MB in 0s (169 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt4q1renq/gcc-15-aarch64-linux-gnu_15.2.0-12_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpam-modules arm64 1.7.0-5 [172 kB] Fetched 172 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqi3h80t7/libpam-modules_1.7.0-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libc-dev-bin arm64 2.42-7 [59.8 kB] Fetched 59.8 kB in 0s (5921 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp270w8lv6/libc-dev-bin_2.42-7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libsystemd0 arm64 259-1 [430 kB] Fetched 430 kB in 0s (32.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplf9k4nqf/libsystemd0_259-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libffi8 arm64 3.5.2-3 [23.0 kB] Fetched 23.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpip34gf1x/libffi8_3.5.2-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libcrypt1 arm64 1:4.5.1-1 [93.9 kB] Fetched 93.9 kB in 0s (0 B/s) dpkg-name: info: moved 'libcrypt1_1%3a4.5.1-1_arm64.deb' to '/srv/rebuilderd/tmp/tmp0iaiulli/libcrypt1_4.5.1-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgdbm-compat4t64 arm64 1.26-1 [52.8 kB] Fetched 52.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpiupybosn/libgdbm-compat4t64_1.26-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 perl-modules-5.40 all 5.40.1-7 [3012 kB] Fetched 3012 kB in 0s (104 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1gwuu5ox/perl-modules-5.40_5.40.1-7_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libisl23 arm64 0.27-1 [601 kB] Fetched 601 kB in 0s (51.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbnrxlvpj/libisl23_0.27-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 procps arm64 2:4.0.4-9 [871 kB] Fetched 871 kB in 0s (53.6 MB/s) dpkg-name: info: moved 'procps_2%3a4.0.4-9_arm64.deb' to '/srv/rebuilderd/tmp/tmp3s3bhwrd/procps_4.0.4-9_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 mawk arm64 1.3.4.20250131-2 [133 kB] Fetched 133 kB in 0s (12.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2pxan1gp/mawk_1.3.4.20250131-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 g++-aarch64-linux-gnu arm64 4:15.2.0-4 [1196 B] Fetched 1196 B in 0s (114 kB/s) dpkg-name: info: moved 'g++-aarch64-linux-gnu_4%3a15.2.0-4_arm64.deb' to '/srv/rebuilderd/tmp/tmpj35rmg2d/g++-aarch64-linux-gnu_15.2.0-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libnettle8t64 arm64 3.10.2-1 [305 kB] Fetched 305 kB in 0s (24.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnd3l1uxj/libnettle8t64_3.10.2-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 groff-base arm64 1.23.0-10 [1130 kB] Fetched 1130 kB in 0s (70.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9ew652zb/groff-base_1.23.0-10_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T142729Z sid/main arm64 python3 arm64 3.13.9-2 [27.5 kB] Fetched 27.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt06qh_2f/python3_3.13.9-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libmpfr6 arm64 4.2.2-2 [685 kB] Fetched 685 kB in 0s (59.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxv00i4ps/libmpfr6_4.2.2-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3.13-minimal arm64 3.13.11-1+b1 [2060 kB] Fetched 2060 kB in 0s (83.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpli5y03oe/python3.13-minimal_3.13.11-1+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260111T142729Z sid/main arm64 python3-minimal arm64 3.13.9-2 [27.5 kB] Fetched 27.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5zofcpax/python3-minimal_3.13.9-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpam0g arm64 1.7.0-5 [68.8 kB] Fetched 68.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpslrxrmo3/libpam0g_1.7.0-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 tzdata all 2025c-3 [263 kB] Fetched 263 kB in 0s (23.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmposcb8i0a/tzdata_2025c-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 findutils arm64 4.10.0-3 [696 kB] Fetched 696 kB in 0s (60.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpowxstyce/findutils_4.10.0-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libc6-dev arm64 2.42-7 [1695 kB] Fetched 1695 kB in 0s (104 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplmp4ob78/libc6-dev_2.42-7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libatomic1 arm64 15.2.0-12 [9852 B] Fetched 9852 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_por08ux/libatomic1_15.2.0-12_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 make arm64 4.4.1-3 [453 kB] Fetched 453 kB in 0s (27.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbhy0hro7/make_4.4.1-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libcc1-0 arm64 15.2.0-12 [41.3 kB] Fetched 41.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8gvz975a/libcc1-0_15.2.0-12_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 gzip arm64 1.13-1 [135 kB] Fetched 135 kB in 0s (13.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpql4ykxae/gzip_1.13-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 cpp-15 arm64 15.2.0-12 [1276 B] Fetched 1276 B in 0s (110 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6qk5y5py/cpp-15_15.2.0-12_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libnghttp2-14 arm64 1.64.0-1.1+b1 [71.7 kB] Fetched 71.7 kB in 0s (4177 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2klzbi0l/libnghttp2-14_1.64.0-1.1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 sysvinit-utils arm64 3.15-6 [34.9 kB] Fetched 34.9 kB in 0s (3235 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwe1pjgnj/sysvinit-utils_3.15-6_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libreadline8t64 arm64 8.3-3 [169 kB] Fetched 169 kB in 0s (13.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjld362u3/libreadline8t64_8.3-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgmp10 arm64 2:6.3.0+dfsg-5 [535 kB] Fetched 535 kB in 0s (40.5 MB/s) dpkg-name: info: moved 'libgmp10_2%3a6.3.0+dfsg-5_arm64.deb' to '/srv/rebuilderd/tmp/tmp1qoy5bnu/libgmp10_6.3.0+dfsg-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libubsan1 arm64 15.2.0-12 [1064 kB] Fetched 1064 kB in 0s (40.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5myxpsi0/libubsan1_15.2.0-12_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libkrb5support0 arm64 1.22.1-2 [32.2 kB] Fetched 32.2 kB in 0s (1949 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfhn2uxcq/libkrb5support0_1.22.1-2_arm64.deb' Downloading dependency 1 of 194: libjsoncpp26:arm64=1.9.6-5 Downloading dependency 2 of 194: libperl5.40:arm64=5.40.1-7 Downloading dependency 3 of 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hostname:arm64=3.25 Downloading dependency 98 of 194: gcc-15-aarch64-linux-gnu:arm64=15.2.0-12 Downloading dependency 99 of 194: libpam-modules:arm64=1.7.0-5 Downloading dependency 100 of 194: libc-dev-bin:arm64=2.42-7 Downloading dependency 101 of 194: libsystemd0:arm64=259-1 Downloading dependency 102 of 194: libffi8:arm64=3.5.2-3 Downloading dependency 103 of 194: libcrypt1:arm64=1:4.5.1-1 Downloading dependency 104 of 194: libgdbm-compat4t64:arm64=1.26-1 Downloading dependency 105 of 194: perl-modules-5.40:arm64=5.40.1-7 Downloading dependency 106 of 194: libisl23:arm64=0.27-1 Downloading dependency 107 of 194: procps:arm64=2:4.0.4-9 Downloading dependency 108 of 194: mawk:arm64=1.3.4.20250131-2 Downloading dependency 109 of 194: g++-aarch64-linux-gnu:arm64=4:15.2.0-4 Downloading dependency 110 of 194: libnettle8t64:arm64=3.10.2-1 Downloading dependency 111 of 194: groff-base:arm64=1.23.0-10 Downloading dependency 112 of 194: python3:arm64=3.13.9-2 Downloading dependency 113 of 194: libmpfr6:arm64=4.2.2-2 Downloading dependency 114 of 194: python3.13-minimal:arm64=3.13.11-1+b1 Downloading dependency 115 of 194: python3-minimal:arm64=3.13.9-2 Downloading dependency 116 of 194: libpam0g:arm64=1.7.0-5 Downloading dependency 117 of 194: tzdata:arm64=2025c-3 Downloading dependency 118 of 194: findutils:arm64=4.10.0-3 Downloading dependency 119 of 194: libc6-dev:arm64=2.42-7 Downloading dependency 120 of 194: libatomic1:arm64=15.2.0-12 Downloading dependency 121 of 194: make:arm64=4.4.1-3 Downloading dependency 122 of 194: libcc1-0:arm64=15.2.0-12 Downloading dependency 123 of 194: gzip:arm64=1.13-1 Downloading dependency 124 of 194: cpp-15:arm64=15.2.0-12 Downloading dependency 125 of 194: libnghttp2-14:arm64=1.64.0-1.1+b1 Downloading dependency 126 of 194: sysvinit-utils:arm64=3.15-6 Downloading dependency 127 of 194: libreadline8t64:arm64=8.3-3 Downloading dependency 128 of 194: libgmp10:arm64=2:6.3.0+dfsg-5 Downloading dependency 129 of 194: libubsan1:arm64=15.2.0-12 Downloading dependency 130 of 194: libkrb5support0:arm64=1.22.1-2 Downloading dependency 131 of 194: cpp:arm64=4:15.2.0-4Get:1 http://deb.debian.org/debian unstable/main arm64 cpp arm64 4:15.2.0-4 [1568 B] Fetched 1568 B in 0s (95.1 kB/s) dpkg-name: info: moved 'cpp_4%3a15.2.0-4_arm64.deb' to '/srv/rebuilderd/tmp/tmpnk_u2zrx/cpp_15.2.0-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libaudit-common all 1:4.1.2-1 [14.3 kB] Fetched 14.3 kB in 0s (871 kB/s) dpkg-name: info: moved 'libaudit-common_1%3a4.1.2-1_all.deb' to '/srv/rebuilderd/tmp/tmp4yu_x8rk/libaudit-common_4.1.2-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libuchardet0 arm64 0.0.8-2 [69.0 kB] Fetched 69.0 kB in 0s (6426 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyk2g4wtk/libuchardet0_0.0.8-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 perl arm64 5.40.1-7 [267 kB] Fetched 267 kB in 0s (14.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprupdxvrc/perl_5.40.1-7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libcom-err2 arm64 1.47.2-3+b8 [24.9 kB] Fetched 24.9 kB in 0s (1469 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr3_iyitx/libcom-err2_1.47.2-3+b8_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libsframe2 arm64 2.45.50.20251209-1 [79.7 kB] Fetched 79.7 kB in 0s (4672 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpceezoms4/libsframe2_2.45.50.20251209-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libctf0 arm64 2.45.50.20251209-1 [85.6 kB] Fetched 85.6 kB in 0s (4977 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqemwsaii/libctf0_2.45.50.20251209-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libidn2-0 arm64 2.3.8-4 [108 kB] Fetched 108 kB in 0s (6329 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxdrte0ik/libidn2-0_2.3.8-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 diffutils arm64 1:3.12-1 [397 kB] Fetched 397 kB in 0s (20.4 MB/s) dpkg-name: info: moved 'diffutils_1%3a3.12-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpgfbw9szc/diffutils_3.12-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libsqlite3-0 arm64 3.46.1-8 [884 kB] Fetched 884 kB in 0s (60.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcs0ln817/libsqlite3-0_3.46.1-8_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 po-debconf all 1.0.22 [216 kB] Fetched 216 kB in 0s (18.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp32sysyyp/po-debconf_1.0.22_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libmagic1t64 arm64 1:5.46-5 [103 kB] Fetched 103 kB in 0s (4064 kB/s) dpkg-name: info: moved 'libmagic1t64_1%3a5.46-5_arm64.deb' to '/srv/rebuilderd/tmp/tmpbt_j7k0z/libmagic1t64_5.46-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 gcc-15 arm64 15.2.0-12 [519 kB] Fetched 519 kB in 0s (30.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbn0gkcfo/gcc-15_15.2.0-12_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libbz2-dev arm64 1.0.8-6 [31.9 kB] Fetched 31.9 kB in 0s (3098 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqsiq8689/libbz2-dev_1.0.8-6_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgssapi-krb5-2 arm64 1.22.1-2 [127 kB] Fetched 127 kB in 0s (9775 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuxbjc81s/libgssapi-krb5-2_1.22.1-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libblkid1 arm64 2.41.3-3 [167 kB] Fetched 167 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9p16dxoo/libblkid1_2.41.3-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libjansson4 arm64 2.14-2+b4 [38.9 kB] Fetched 38.9 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp82o8ebrn/libjansson4_2.14-2+b4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libkeyutils1 arm64 1.6.3-6 [9716 B] Fetched 9716 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp61619rc7/libkeyutils1_1.6.3-6_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 m4 arm64 1.4.20-2 [315 kB] Fetched 315 kB in 0s (22.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmenbrfl6/m4_1.4.20-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 build-essential arm64 12.12 [4624 B] Fetched 4624 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcdqv1ra1/build-essential_12.12_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 gcc-15-base arm64 15.2.0-12 [54.2 kB] Fetched 54.2 kB in 0s (5355 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpagwcneld/gcc-15-base_15.2.0-12_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1+b2 [917 kB] Fetched 917 kB in 0s (75.9 MB/s) dpkg-name: info: moved 'zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1+b2_arm64.deb' to '/srv/rebuilderd/tmp/tmproj8xh1y/zlib1g-dev_1.3.dfsg+really1.3.1-1+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libtool all 2.5.4-9 [540 kB] Fetched 540 kB in 0s (38.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz520k74a/libtool_2.5.4-9_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libdb5.3t64 arm64 5.3.28+dfsg2-11 [626 kB] Fetched 626 kB in 0s (55.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpw9am4y3g/libdb5.3t64_5.3.28+dfsg2-11_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 debhelper all 13.29 [943 kB] Fetched 943 kB in 0s (78.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsjhjrdvs/debhelper_13.29_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-3 [56.3 kB] Fetched 56.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7phwf5ko/librtmp1_2.4+20151223.gitfa8646d.1-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libc6 arm64 2.42-7 [1462 kB] Fetched 1462 kB in 0s (93.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpreu407ov/libc6_2.42-7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 bash arm64 5.3-1 [1507 kB] Fetched 1507 kB in 0s (103 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpve0wsrju/bash_5.3-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 dash arm64 0.5.12-12 [95.6 kB] Fetched 95.6 kB in 0s (8966 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_02mx68b/dash_0.5.12-12_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 debianutils arm64 5.23.2 [92.4 kB] Fetched 92.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1bzo7ogb/debianutils_5.23.2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 init-system-helpers all 1.69 [39.3 kB] Fetched 39.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp01i435q8/init-system-helpers_1.69_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libattr1 arm64 1:2.5.2-3 [22.7 kB] Fetched 22.7 kB in 0s (0 B/s) dpkg-name: info: moved 'libattr1_1%3a2.5.2-3_arm64.deb' to '/srv/rebuilderd/tmp/tmp1509l6zw/libattr1_2.5.2-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgprofng0 arm64 2.45.50.20251209-1 [679 kB] Fetched 679 kB in 0s (44.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_aytz2tj/libgprofng0_2.45.50.20251209-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libmount1 arm64 2.41.3-3 [199 kB] Fetched 199 kB in 0s (18.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5m00prq7/libmount1_2.41.3-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libseccomp2 arm64 2.6.0-2+b1 [50.9 kB] Fetched 50.9 kB in 0s (5030 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpw1donz8c/libseccomp2_2.6.0-2+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpsl5t64 arm64 0.21.2-1.1+b1 [57.1 kB] Fetched 57.1 kB in 0s (5324 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkcbvbja5/libpsl5t64_0.21.2-1.1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libc-bin arm64 2.42-7 [574 kB] Fetched 574 kB in 0s (49.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8j771i5b/libc-bin_2.42-7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpython3.13-stdlib arm64 3.13.11-1+b1 [1903 kB] Fetched 1903 kB in 0s (117 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuz7e7b3b/libpython3.13-stdlib_3.13.11-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 patch arm64 2.8-2 [128 kB] Fetched 128 kB in 0s (12.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnb1w3mkg/patch_2.8-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libstdc++-15-dev arm64 15.2.0-12 [2348 kB] Fetched 2348 kB in 0s (135 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3b996lhc/libstdc++-15-dev_15.2.0-12_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgdbm6t64 arm64 1.26-1 [77.5 kB] Fetched 77.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8di9xjnr/libgdbm6t64_1.26-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 media-types all 14.0.0 [30.8 kB] Fetched 30.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9v7dkloa/media-types_14.0.0_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libcap2 arm64 1:2.75-10+b5 [28.2 kB] Fetched 28.2 kB in 0s (1630 kB/s) dpkg-name: info: moved 'libcap2_1%3a2.75-10+b5_arm64.deb' to '/srv/rebuilderd/tmp/tmpb2o_o29a/libcap2_2.75-10+b5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libstdc++6 arm64 15.2.0-12 [648 kB] Fetched 648 kB in 0s (48.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpe5cx6f3s/libstdc++6_15.2.0-12_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libdebconfclient0 arm64 0.282+b2 [11.3 kB] Fetched 11.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpg1tg6dkw/libdebconfclient0_0.282+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libasan8 arm64 15.2.0-12 [2601 kB] Fetched 2601 kB in 0s (112 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpodf4rzhf/libasan8_15.2.0-12_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libtsan2 arm64 15.2.0-12 [2399 kB] Fetched 2399 kB in 0s (130 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9oc9n0ex/libtsan2_15.2.0-12_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 sensible-utils all 0.0.26 [27.0 kB] Fetched 27.0 kB in 0s (569 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2hd0y038/sensible-utils_0.0.26_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libzstd1 arm64 1.5.7+dfsg-3 [260 kB] Fetched 260 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9mwm3hiv/libzstd1_1.5.7+dfsg-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libbinutils arm64 2.45.50.20251209-1 [670 kB] Fetched 670 kB in 0s (59.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp34q7f5b/libbinutils_2.45.50.20251209-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 g++-15 arm64 15.2.0-12 [25.0 kB] Fetched 25.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpui57bpct/g++-15_15.2.0-12_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libdebhelper-perl all 13.29 [92.6 kB] Fetched 92.6 kB in 0s (7802 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpepx5fa0k/libdebhelper-perl_13.29_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libcurl4t64 arm64 8.18.0-1 [372 kB] Fetched 372 kB in 0s (35.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzfb2sj74/libcurl4t64_8.18.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libmpc3 arm64 1.3.1-2 [50.2 kB] Fetched 50.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprl4s8g9d/libmpc3_1.3.1-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 liblzma5 arm64 5.8.2-1 [320 kB] Fetched 320 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpva9pe504/liblzma5_5.8.2-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 autopoint all 0.23.2-1 [772 kB] Fetched 772 kB in 0s (57.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbyr9oqli/autopoint_0.23.2-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 dh-autoreconf all 21 [12.2 kB] Fetched 12.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpliwwyrf5/dh-autoreconf_21_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgcc-15-dev arm64 15.2.0-12 [2365 kB] Fetched 2365 kB in 0s (108 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpchexk68r/libgcc-15-dev_15.2.0-12_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libkrb5-3 arm64 1.22.1-2 [315 kB] Fetched 315 kB in 0s (21.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpe43jm1zk/libkrb5-3_1.22.1-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libsmartcols1 arm64 2.41.3-3 [139 kB] Fetched 139 kB in 0s (10.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd17je8wd/libsmartcols1_2.41.3-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libaudit1 arm64 1:4.1.2-1+b1 [59.7 kB] Fetched 59.7 kB in 0s (2895 kB/s) dpkg-name: info: moved 'libaudit1_1%3a4.1.2-1+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmpiaxyfu_a/libaudit1_4.1.2-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 dwz arm64 0.16-2 [100 kB] Fetched 100 kB in 0s (8561 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdbtrm0s_/dwz_0.16-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 coreutils arm64 9.7-3 [2949 kB] Fetched 2949 kB in 0s (163 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2_8btelw/coreutils_9.7-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Fetched 104 kB in 0s (10.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcad3mrrp/libarchive-zip-perl_1.68-1_all.deb' dpkg-buildpackage: info: source package debootsnap-dummy dpkg-buildpackage: info: source version 1.0 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Equivs Dummy Package Generator dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/debootsnap-dummy/ dh_install dh_installdocs dh_installchangelogs dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'debootsnap-dummy' in '../debootsnap-dummy_1.0_all.deb'. dpkg-genbuildinfo --build=binary -O../debootsnap-dummy_1.0_arm64.buildinfo dpkg-genchanges --build=binary -O../debootsnap-dummy_1.0_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) The package has been created. Attention, the package has been created in the /srv/rebuilderd/tmp/tmpk9v5572r/cache directory, not in ".." as indicated by the message above! I: automatically chosen mode: unshare I: chroot architecture arm64 is equal to the host's architecture I: using /srv/rebuilderd/tmp/mmdebstrap.Iaf3PAIMQp as tempdir I: running --setup-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/setup00.sh /srv/rebuilderd/tmp/mmdebstrap.Iaf3PAIMQp 127.0.0.1 - - [14/Jan/2026 20:59:34] code 404, message File not found 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./InRelease HTTP/1.1" 404 - Ign:1 http://localhost:35093 ./ InRelease 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./Release HTTP/1.1" 200 - Get:2 http://localhost:35093 ./ Release [462 B] 127.0.0.1 - - [14/Jan/2026 20:59:34] code 404, message File not found 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./Release.gpg HTTP/1.1" 404 - Ign:3 http://localhost:35093 ./ Release.gpg 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./Packages HTTP/1.1" 200 - Get:4 http://localhost:35093 ./ Packages [239 kB] Fetched 240 kB in 0s (13.2 MB/s) Reading package lists... usr-is-merged found but not real -- not running merged-usr setup hook I: skipping apt-get update because it was already run I: downloading packages with apt... 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./gcc-15-base_15.2.0-12_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./libc-gconv-modules-extra_2.42-7_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./libc6_2.42-7_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./libgcc-s1_15.2.0-12_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./mawk_1.3.4.20250131-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./base-files_14_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./libtinfo6_6.6%2b20251231-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./debianutils_5.23.2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./bash_5.3-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./libacl1_2.3.2-2%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./libattr1_2.5.2-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./libcap2_2.75-10%2bb5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./libgmp10_6.3.0%2bdfsg-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./libpcre2-8-0_10.46-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./libselinux1_3.9-4%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./libzstd1_1.5.7%2bdfsg-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./zlib1g_1.3.dfsg%2breally1.3.1-1%2bb2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./libssl3t64_3.5.4-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./openssl-provider-legacy_3.5.4-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./libsystemd0_259-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./coreutils_9.7-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./dash_0.5.12-12_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./diffutils_3.12-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./libbz2-1.0_1.0.8-6_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./liblzma5_5.8.2-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./libmd0_1.1.0-2%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./tar_1.35%2bdfsg-3.1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./dpkg_1.23.3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./findutils_4.10.0-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./grep_3.12-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./gzip_1.13-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./hostname_3.25_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./ncurses-bin_6.6%2b20251231-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./libcrypt1_4.5.1-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./perl-base_5.40.1-7_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./sed_4.9-2%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./libaudit-common_4.1.2-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./libcap-ng0_0.8.5-4%2bb2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./libaudit1_4.1.2-1%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./libdb5.3t64_5.3.28%2bdfsg2-11_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./debconf_1.5.91_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./libpam0g_1.7.0-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./libpam-modules-bin_1.7.0-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./libpam-modules_1.7.0-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./libpam-runtime_1.7.0-5_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./libblkid1_2.41.3-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./libmount1_2.41.3-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./libsmartcols1_2.41.3-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./libudev1_259-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./libuuid1_2.41.3-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./util-linux_2.41.3-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./libdebconfclient0_0.282%2bb2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./base-passwd_3.6.8_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./init-system-helpers_1.69_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./libc-bin_2.42-7_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./ncurses-base_6.6%2b20251231-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:34] "GET /./sysvinit-utils_3.15-6_arm64.deb HTTP/1.1" 200 - I: extracting archives... I: running --extract-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/extract00.sh /srv/rebuilderd/tmp/mmdebstrap.Iaf3PAIMQp 127.0.0.1 - - [14/Jan/2026 20:59:36] code 404, message File not found 127.0.0.1 - - [14/Jan/2026 20:59:36] "GET /./InRelease HTTP/1.1" 404 - Ign:1 http://localhost:35093 ./ InRelease 127.0.0.1 - - [14/Jan/2026 20:59:36] "GET /./Release HTTP/1.1" 304 - Hit:2 http://localhost:35093 ./ Release 127.0.0.1 - - [14/Jan/2026 20:59:36] code 404, message File not found 127.0.0.1 - - [14/Jan/2026 20:59:36] "GET /./Release.gpg HTTP/1.1" 404 - Ign:3 http://localhost:35093 ./ Release.gpg Reading package lists... usr-is-merged found but not real -- not running merged-usr extract hook I: installing essential packages... I: running --essential-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/essential00.sh /srv/rebuilderd/tmp/mmdebstrap.Iaf3PAIMQp usr-is-merged was not installed in a previous hook -- not running merged-usr essential hook I: installing remaining packages inside the chroot... 127.0.0.1 - - [14/Jan/2026 20:59:42] "GET /./libexpat1_2.7.3-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:42] "GET /./libpython3.13-minimal_3.13.11-1%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:42] "GET /./python3.13-minimal_3.13.11-1%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:42] "GET /./python3-minimal_3.13.9-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:42] "GET /./media-types_14.0.0_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:42] "GET /./netbase_6.5_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:42] "GET /./tzdata_2025c-3_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [14/Jan/2026 20:59:42] "GET /./libffi8_3.5.2-3_arm64.deb HTTP/1.1" 200 - 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Building dependency tree... Reading state information... libjsoncpp26 is already the newest version (1.9.6-5). libjsoncpp26 set to manually installed. libperl5.40 is already the newest version (5.40.1-7). libperl5.40 set to manually installed. liblz4-1 is already the newest version (1.10.0-6). liblz4-1 set to manually installed. openssl-provider-legacy is already the newest version (3.5.4-1). rpcsvc-proto is already the newest version (1.4.3-1+b1). rpcsvc-proto set to manually installed. cmake-data is already the newest version (4.1.1+really3.31.6-2). cmake-data set to manually installed. libselinux1 is already the newest version (3.9-4+b1). base-files is already the newest version (14). base-passwd is already the newest version (3.6.8). libudev1 is already the newest version (259-1). libgomp1 is already the newest version (15.2.0-12). libgomp1 set to manually installed. libk5crypto3 is already the newest version (1.22.1-2). libk5crypto3 set to manually installed. gcc-aarch64-linux-gnu is already the newest version (4:15.2.0-4). gcc-aarch64-linux-gnu set to manually installed. libfile-stripnondeterminism-perl is already the newest version (1.15.0-1). libfile-stripnondeterminism-perl set to manually installed. libmagic-mgc is already the newest version (1:5.46-5). libmagic-mgc set to manually installed. linux-libc-dev is already the newest version (6.18.3-1). linux-libc-dev set to manually installed. cpp-aarch64-linux-gnu is already the newest version (4:15.2.0-4). cpp-aarch64-linux-gnu set to manually installed. bsdextrautils is already the newest version (2.41.3-3). bsdextrautils set to manually installed. libitm1 is already the newest version (15.2.0-12). libitm1 set to manually installed. sed is already the newest version (4.9-2+b1). libbz2-1.0 is already the newest version (1.0.8-6). tar is already the newest version (1.35+dfsg-3.1). zlib1g is already the newest version (1:1.3.dfsg+really1.3.1-1+b2). man-db is already the newest version (2.13.1-1). man-db set to manually installed. libsasl2-modules-db is already the newest version (2.1.28+dfsg1-10). libsasl2-modules-db set to manually installed. libpam-runtime is already the newest version (1.7.0-5). libnghttp3-9 is already the newest version (1.12.0-1). libnghttp3-9 set to manually installed. libboost-dev is already the newest version (1.83.0.2+b2). libboost-dev set to manually installed. automake is already the newest version (1:1.18.1-3). automake set to manually installed. dh-strip-nondeterminism is already the newest version (1.15.0-1). dh-strip-nondeterminism set to manually installed. libpython3-stdlib is already the newest version (3.13.9-2). libpython3-stdlib set to manually installed. binutils-common is already the newest version (2.45.50.20251209-1). binutils-common set to manually installed. gettext is already the newest version (0.23.2-1). gettext set to manually installed. libdpkg-perl is already the newest version (1.23.3). libdpkg-perl set to manually installed. libgnutls30t64 is already the newest version (3.8.11-3). libgnutls30t64 set to manually installed. ncurses-bin is already the newest version (6.6+20251231-1). libpam-modules-bin is already the newest version (1.7.0-5). libtasn1-6 is already the newest version (4.20.0-2). libtasn1-6 set to manually installed. intltool-debian is already the newest version (0.35.0+20060710.6). intltool-debian set to manually installed. cmake is already the newest version (4.1.1+really3.31.6-2). cmake set to manually installed. libldap2 is already the newest version (2.6.10+dfsg-1). libldap2 set to manually installed. g++-15-aarch64-linux-gnu is already the newest version (15.2.0-12). g++-15-aarch64-linux-gnu set to manually installed. libpython3.13-minimal is already the newest version (3.13.11-1+b1). libpython3.13-minimal set to manually installed. libexpat1 is already the newest version (2.7.3-1). libexpat1 set to manually installed. libunistring5 is already the newest version (1.3-2). libunistring5 set to manually installed. xz-utils is already the newest version (5.8.2-1). xz-utils set to manually installed. autoconf is already the newest version (2.72-3.1). autoconf set to manually installed. dpkg is already the newest version (1.23.3). gettext-base is already the newest version (0.23.2-1). gettext-base set to manually installed. libngtcp2-16 is already the newest version (1.16.0-1). libngtcp2-16 set to manually installed. libsasl2-2 is already the newest version (2.1.28+dfsg1-10). libsasl2-2 set to manually installed. libarchive13t64 is already the newest version (3.8.4-1). libarchive13t64 set to manually installed. libngtcp2-crypto-ossl0 is already the newest version (1.16.0-1). libngtcp2-crypto-ossl0 set to manually installed. architecture-properties is already the newest version (0.2.6). architecture-properties set to manually installed. g++ is already the newest version (4:15.2.0-4). g++ set to manually installed. autotools-dev is already the newest version (20240727.1). autotools-dev set to manually installed. libproc2-0 is already the newest version (2:4.0.4-9). libproc2-0 set to manually installed. libxxhash0 is already the newest version (0.8.3-2). libxxhash0 set to manually installed. libssh2-1t64 is already the newest version (1.11.1-1). libssh2-1t64 set to manually installed. python3.13 is already the newest version (3.13.11-1+b1). python3.13 set to manually installed. ncurses-base is already the newest version (6.6+20251231-1). libpipeline1 is already the newest version (1.5.8-2). libpipeline1 set to manually installed. libxml2-16 is already the newest version (2.15.1+dfsg-2+b1). libxml2-16 set to manually installed. libbrotli1 is already the newest version (1.1.0-2+b9). libbrotli1 set to manually installed. libelf1t64 is already the newest version (0.194-1). libelf1t64 set to manually installed. libuv1t64 is already the newest version (1.51.0-2). libuv1t64 set to manually installed. libtinfo6 is already the newest version (6.6+20251231-1). libmd0 is already the newest version (1.1.0-2+b1). grep is already the newest version (3.12-1). dpkg-dev is already the newest version (1.23.3). dpkg-dev set to manually installed. file is already the newest version (1:5.46-5). file set to manually installed. libncursesw6 is already the newest version (6.6+20251231-1). libncursesw6 set to manually installed. liblsan0 is already the newest version (15.2.0-12). liblsan0 set to manually installed. debconf is already the newest version (1.5.91). binutils-aarch64-linux-gnu is already the newest version (2.45.50.20251209-1). binutils-aarch64-linux-gnu set to manually installed. libssl3t64 is already the newest version (3.5.4-1). libgcc-s1 is already the newest version (15.2.0-12). libhogweed6t64 is already the newest version (3.10.2-1). libhogweed6t64 set to manually installed. libp11-kit0 is already the newest version (0.25.10-1). libp11-kit0 set to manually installed. readline-common is already the newest version (8.3-3). readline-common set to manually installed. cpp-15-aarch64-linux-gnu is already the newest version (15.2.0-12). cpp-15-aarch64-linux-gnu set to manually installed. librhash1 is already the newest version (1.4.6-1.1). librhash1 set to manually installed. netbase is already the newest version (6.5). netbase set to manually installed. libcap-ng0 is already the newest version (0.8.5-4+b2). libctf-nobfd0 is already the newest version (2.45.50.20251209-1). libctf-nobfd0 set to manually installed. libc-gconv-modules-extra is already the newest version (2.42-7). libpcre2-8-0 is already the newest version (10.46-1). perl-base is already the newest version (5.40.1-7). libboost1.83-dev is already the newest version (1.83.0-5+b1). libboost1.83-dev set to manually installed. libacl1 is already the newest version (2.3.2-2+b1). libuuid1 is already the newest version (2.41.3-3). libhwasan0 is already the newest version (15.2.0-12). libhwasan0 set to manually installed. binutils is already the newest version (2.45.50.20251209-1). binutils set to manually installed. util-linux is already the newest version (2.41.3-3). bzip2 is already the newest version (1.0.8-6). bzip2 set to manually installed. gcc is already the newest version (4:15.2.0-4). gcc set to manually installed. hostname is already the newest version (3.25). gcc-15-aarch64-linux-gnu is already the newest version (15.2.0-12). gcc-15-aarch64-linux-gnu set to manually installed. libpam-modules is already the newest version (1.7.0-5). libc-dev-bin is already the newest version (2.42-7). libc-dev-bin set to manually installed. libsystemd0 is already the newest version (259-1). libffi8 is already the newest version (3.5.2-3). libffi8 set to manually installed. libcrypt1 is already the newest version (1:4.5.1-1). libgdbm-compat4t64 is already the newest version (1.26-1). libgdbm-compat4t64 set to manually installed. perl-modules-5.40 is already the newest version (5.40.1-7). perl-modules-5.40 set to manually installed. libisl23 is already the newest version (0.27-1). libisl23 set to manually installed. procps is already the newest version (2:4.0.4-9). procps set to manually installed. mawk is already the newest version (1.3.4.20250131-2). g++-aarch64-linux-gnu is already the newest version (4:15.2.0-4). g++-aarch64-linux-gnu set to manually installed. libnettle8t64 is already the newest version (3.10.2-1). libnettle8t64 set to manually installed. groff-base is already the newest version (1.23.0-10). groff-base set to manually installed. python3 is already the newest version (3.13.9-2). python3 set to manually installed. libmpfr6 is already the newest version (4.2.2-2). libmpfr6 set to manually installed. python3.13-minimal is already the newest version (3.13.11-1+b1). python3.13-minimal set to manually installed. python3-minimal is already the newest version (3.13.9-2). python3-minimal set to manually installed. libpam0g is already the newest version (1.7.0-5). tzdata is already the newest version (2025c-3). tzdata set to manually installed. findutils is already the newest version (4.10.0-3). libc6-dev is already the newest version (2.42-7). libc6-dev set to manually installed. libatomic1 is already the newest version (15.2.0-12). libatomic1 set to manually installed. make is already the newest version (4.4.1-3). make set to manually installed. libcc1-0 is already the newest version (15.2.0-12). libcc1-0 set to manually installed. gzip is already the newest version (1.13-1). cpp-15 is already the newest version (15.2.0-12). cpp-15 set to manually installed. libnghttp2-14 is already the newest version (1.64.0-1.1+b1). libnghttp2-14 set to manually installed. sysvinit-utils is already the newest version (3.15-6). libreadline8t64 is already the newest version (8.3-3). libreadline8t64 set to manually installed. libgmp10 is already the newest version (2:6.3.0+dfsg-5). libubsan1 is already the newest version (15.2.0-12). libubsan1 set to manually installed. libkrb5support0 is already the newest version (1.22.1-2). libkrb5support0 set to manually installed. cpp is already the newest version (4:15.2.0-4). cpp set to manually installed. libaudit-common is already the newest version (1:4.1.2-1). libuchardet0 is already the newest version (0.0.8-2). libuchardet0 set to manually installed. perl is already the newest version (5.40.1-7). perl set to manually installed. libcom-err2 is already the newest version (1.47.2-3+b8). libcom-err2 set to manually installed. libsframe2 is already the newest version (2.45.50.20251209-1). libsframe2 set to manually installed. libctf0 is already the newest version (2.45.50.20251209-1). libctf0 set to manually installed. libidn2-0 is already the newest version (2.3.8-4). libidn2-0 set to manually installed. diffutils is already the newest version (1:3.12-1). libsqlite3-0 is already the newest version (3.46.1-8). libsqlite3-0 set to manually installed. po-debconf is already the newest version (1.0.22). po-debconf set to manually installed. libmagic1t64 is already the newest version (1:5.46-5). libmagic1t64 set to manually installed. gcc-15 is already the newest version (15.2.0-12). gcc-15 set to manually installed. libbz2-dev is already the newest version (1.0.8-6). libbz2-dev set to manually installed. libgssapi-krb5-2 is already the newest version (1.22.1-2). libgssapi-krb5-2 set to manually installed. libblkid1 is already the newest version (2.41.3-3). libjansson4 is already the newest version (2.14-2+b4). libjansson4 set to manually installed. libkeyutils1 is already the newest version (1.6.3-6). libkeyutils1 set to manually installed. m4 is already the newest version (1.4.20-2). m4 set to manually installed. build-essential is already the newest version (12.12). build-essential set to manually installed. gcc-15-base is already the newest version (15.2.0-12). zlib1g-dev is already the newest version (1:1.3.dfsg+really1.3.1-1+b2). zlib1g-dev set to manually installed. libtool is already the newest version (2.5.4-9). libtool set to manually installed. libdb5.3t64 is already the newest version (5.3.28+dfsg2-11). debhelper is already the newest version (13.29). debhelper set to manually installed. librtmp1 is already the newest version (2.4+20151223.gitfa8646d.1-3). librtmp1 set to manually installed. libc6 is already the newest version (2.42-7). bash is already the newest version (5.3-1). dash is already the newest version (0.5.12-12). debianutils is already the newest version (5.23.2). init-system-helpers is already the newest version (1.69). libattr1 is already the newest version (1:2.5.2-3). libgprofng0 is already the newest version (2.45.50.20251209-1). libgprofng0 set to manually installed. libmount1 is already the newest version (2.41.3-3). libseccomp2 is already the newest version (2.6.0-2+b1). libseccomp2 set to manually installed. libpsl5t64 is already the newest version (0.21.2-1.1+b1). libpsl5t64 set to manually installed. libc-bin is already the newest version (2.42-7). libpython3.13-stdlib is already the newest version (3.13.11-1+b1). libpython3.13-stdlib set to manually installed. patch is already the newest version (2.8-2). patch set to manually installed. libstdc++-15-dev is already the newest version (15.2.0-12). libstdc++-15-dev set to manually installed. libgdbm6t64 is already the newest version (1.26-1). libgdbm6t64 set to manually installed. media-types is already the newest version (14.0.0). media-types set to manually installed. libcap2 is already the newest version (1:2.75-10+b5). libstdc++6 is already the newest version (15.2.0-12). libstdc++6 set to manually installed. libdebconfclient0 is already the newest version (0.282+b2). libasan8 is already the newest version (15.2.0-12). libasan8 set to manually installed. libtsan2 is already the newest version (15.2.0-12). libtsan2 set to manually installed. sensible-utils is already the newest version (0.0.26). sensible-utils set to manually installed. libzstd1 is already the newest version (1.5.7+dfsg-3). libbinutils is already the newest version (2.45.50.20251209-1). libbinutils set to manually installed. g++-15 is already the newest version (15.2.0-12). g++-15 set to manually installed. libdebhelper-perl is already the newest version (13.29). libdebhelper-perl set to manually installed. libcurl4t64 is already the newest version (8.18.0-1). libcurl4t64 set to manually installed. libmpc3 is already the newest version (1.3.1-2). libmpc3 set to manually installed. liblzma5 is already the newest version (5.8.2-1). autopoint is already the newest version (0.23.2-1). autopoint set to manually installed. dh-autoreconf is already the newest version (21). dh-autoreconf set to manually installed. libgcc-15-dev is already the newest version (15.2.0-12). libgcc-15-dev set to manually installed. libkrb5-3 is already the newest version (1.22.1-2). libkrb5-3 set to manually installed. libsmartcols1 is already the newest version (2.41.3-3). libaudit1 is already the newest version (1:4.1.2-1+b1). dwz is already the newest version (0.16-2). dwz set to manually installed. coreutils is already the newest version (9.7-3). libarchive-zip-perl is already the newest version (1.68-1). libarchive-zip-perl set to manually installed. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: running --customize-hook in shell: sh -c 'chroot "$1" dpkg -r debootsnap-dummy' exec /srv/rebuilderd/tmp/mmdebstrap.Iaf3PAIMQp (Reading database ... 36295 files and directories currently installed.) Removing debootsnap-dummy (1.0) ... I: running --customize-hook in shell: sh -c 'chroot "$1" dpkg-query --showformat '${binary:Package}=${Version}\n' --show > "$1/pkglist"' exec /srv/rebuilderd/tmp/mmdebstrap.Iaf3PAIMQp I: running special hook: download /pkglist ./pkglist I: running --customize-hook in shell: sh -c 'rm "$1/pkglist"' exec /srv/rebuilderd/tmp/mmdebstrap.Iaf3PAIMQp I: running special hook: upload sources.list /etc/apt/sources.list I: waiting for background processes to finish... I: cleaning package lists and apt cache... I: skipping cleanup/reproducible as requested I: creating tarball... I: done I: removing tempdir /srv/rebuilderd/tmp/mmdebstrap.Iaf3PAIMQp... I: success in 37.2210 seconds Downloading dependency 132 of 194: libaudit-common:arm64=1:4.1.2-1 Downloading dependency 133 of 194: libuchardet0:arm64=0.0.8-2 Downloading dependency 134 of 194: perl:arm64=5.40.1-7 Downloading dependency 135 of 194: libcom-err2:arm64=1.47.2-3+b8 Downloading dependency 136 of 194: libsframe2:arm64=2.45.50.20251209-1 Downloading dependency 137 of 194: libctf0:arm64=2.45.50.20251209-1 Downloading dependency 138 of 194: libidn2-0:arm64=2.3.8-4 Downloading dependency 139 of 194: diffutils:arm64=1:3.12-1 Downloading dependency 140 of 194: libsqlite3-0:arm64=3.46.1-8 Downloading dependency 141 of 194: po-debconf:arm64=1.0.22 Downloading dependency 142 of 194: libmagic1t64:arm64=1:5.46-5 Downloading dependency 143 of 194: gcc-15:arm64=15.2.0-12 Downloading dependency 144 of 194: libbz2-dev:arm64=1.0.8-6 Downloading dependency 145 of 194: libgssapi-krb5-2:arm64=1.22.1-2 Downloading dependency 146 of 194: libblkid1:arm64=2.41.3-3 Downloading dependency 147 of 194: libjansson4:arm64=2.14-2+b4 Downloading dependency 148 of 194: libkeyutils1:arm64=1.6.3-6 Downloading dependency 149 of 194: m4:arm64=1.4.20-2 Downloading dependency 150 of 194: build-essential:arm64=12.12 Downloading dependency 151 of 194: gcc-15-base:arm64=15.2.0-12 Downloading dependency 152 of 194: zlib1g-dev:arm64=1:1.3.dfsg+really1.3.1-1+b2 Downloading dependency 153 of 194: libtool:arm64=2.5.4-9 Downloading dependency 154 of 194: libdb5.3t64:arm64=5.3.28+dfsg2-11 Downloading dependency 155 of 194: debhelper:arm64=13.29 Downloading dependency 156 of 194: librtmp1:arm64=2.4+20151223.gitfa8646d.1-3 Downloading dependency 157 of 194: libc6:arm64=2.42-7 Downloading dependency 158 of 194: bash:arm64=5.3-1 Downloading dependency 159 of 194: dash:arm64=0.5.12-12 Downloading dependency 160 of 194: debianutils:arm64=5.23.2 Downloading dependency 161 of 194: init-system-helpers:arm64=1.69 Downloading dependency 162 of 194: libattr1:arm64=1:2.5.2-3 Downloading dependency 163 of 194: libgprofng0:arm64=2.45.50.20251209-1 Downloading dependency 164 of 194: libmount1:arm64=2.41.3-3 Downloading dependency 165 of 194: libseccomp2:arm64=2.6.0-2+b1 Downloading dependency 166 of 194: libpsl5t64:arm64=0.21.2-1.1+b1 Downloading dependency 167 of 194: libc-bin:arm64=2.42-7 Downloading dependency 168 of 194: libpython3.13-stdlib:arm64=3.13.11-1+b1 Downloading dependency 169 of 194: patch:arm64=2.8-2 Downloading dependency 170 of 194: libstdc++-15-dev:arm64=15.2.0-12 Downloading dependency 171 of 194: libgdbm6t64:arm64=1.26-1 Downloading dependency 172 of 194: media-types:arm64=14.0.0 Downloading dependency 173 of 194: libcap2:arm64=1:2.75-10+b5 Downloading dependency 174 of 194: libstdc++6:arm64=15.2.0-12 Downloading dependency 175 of 194: libdebconfclient0:arm64=0.282+b2 Downloading dependency 176 of 194: libasan8:arm64=15.2.0-12 Downloading dependency 177 of 194: libtsan2:arm64=15.2.0-12 Downloading dependency 178 of 194: sensible-utils:arm64=0.0.26 Downloading dependency 179 of 194: libzstd1:arm64=1.5.7+dfsg-3 Downloading dependency 180 of 194: libbinutils:arm64=2.45.50.20251209-1 Downloading dependency 181 of 194: g++-15:arm64=15.2.0-12 Downloading dependency 182 of 194: libdebhelper-perl:arm64=13.29 Downloading dependency 183 of 194: libcurl4t64:arm64=8.18.0-1 Downloading dependency 184 of 194: libmpc3:arm64=1.3.1-2 Downloading dependency 185 of 194: liblzma5:arm64=5.8.2-1 Downloading dependency 186 of 194: autopoint:arm64=0.23.2-1 Downloading dependency 187 of 194: dh-autoreconf:arm64=21 Downloading dependency 188 of 194: libgcc-15-dev:arm64=15.2.0-12 Downloading dependency 189 of 194: libkrb5-3:arm64=1.22.1-2 Downloading dependency 190 of 194: libsmartcols1:arm64=2.41.3-3 Downloading dependency 191 of 194: libaudit1:arm64=1:4.1.2-1+b1 Downloading dependency 192 of 194: dwz:arm64=0.16-2 Downloading dependency 193 of 194: coreutils:arm64=9.7-3 Downloading dependency 194 of 194: libarchive-zip-perl:arm64=1.68-1 env --chdir=/srv/rebuilderd/tmp/rebuilderd0EwZRe/out DEB_BUILD_OPTIONS=parallel=8 LANG=C.UTF-8 LC_COLLATE=C.UTF-8 LC_CTYPE=C.UTF-8 SOURCE_DATE_EPOCH=1767948346 SBUILD_CONFIG=/srv/rebuilderd/tmp/debrebuildy4KGtm/debrebuild.sbuildrc.1_npB87T7GXR sbuild --build=arm64 --host=arm64 --no-source --arch-any --no-arch-all --chroot=/srv/rebuilderd/tmp/debrebuildy4KGtm/debrebuild.tar.KSz_9SeaPkB7 --chroot-mode=unshare --dist=unstable --no-run-lintian --no-run-piuparts --no-run-autopkgtest --no-apt-update --no-apt-upgrade --no-apt-distupgrade --verbose --nolog --bd-uninstallable-explainer= --build-path=/build/reproducible-path --dsc-dir=seqan2-2.5.2 /srv/rebuilderd/tmp/rebuilderd0EwZRe/inputs/seqan2_2.5.2-1.dsc I: consider moving your ~/.sbuildrc to /srv/rebuilderd/.config/sbuild/config.pl The Debian buildds switched to the "unshare" backend and sbuild will default to it in the future. To start using "unshare" add this to your `~/.config/sbuild/config.pl`: $chroot_mode = "unshare"; If you want to keep the old "schroot" mode even in the future, add the following to your `~/.config/sbuild/config.pl`: $chroot_mode = "schroot"; $schroot = "schroot"; sbuild (Debian sbuild) 0.89.3+deb13u4 (28 December 2025) on codethink02-arm64 +==============================================================================+ | seqan2 2.5.2-1 (arm64) Wed, 14 Jan 2026 21:00:11 +0000 | +==============================================================================+ Package: seqan2 Version: 2.5.2-1 Source Version: 2.5.2-1 Distribution: unstable Machine Architecture: arm64 Host Architecture: arm64 Build Architecture: arm64 Build Type: any I: No tarballs found in /srv/rebuilderd/.cache/sbuild I: Unpacking /srv/rebuilderd/tmp/debrebuildy4KGtm/debrebuild.tar.KSz_9SeaPkB7 to /srv/rebuilderd/tmp/tmp.sbuild.1Z0kTCwpnq... I: Setting up the chroot... I: Creating chroot session... I: Setting up log color... I: Setting up apt archive... +------------------------------------------------------------------------------+ | Fetch source files Wed, 14 Jan 2026 21:00:18 +0000 | +------------------------------------------------------------------------------+ Local sources ------------- /srv/rebuilderd/tmp/rebuilderd0EwZRe/inputs/seqan2_2.5.2-1.dsc exists in /srv/rebuilderd/tmp/rebuilderd0EwZRe/inputs; copying to chroot +------------------------------------------------------------------------------+ | Install package build dependencies Wed, 14 Jan 2026 21:00:19 +0000 | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), architecture-is-64-bit, python3, cmake, build-essential, zlib1g-dev, libbz2-dev, libboost-dev Filtered Build-Depends: debhelper-compat (= 13), architecture-is-64-bit, python3, cmake, build-essential, zlib1g-dev, libbz2-dev, libboost-dev dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/build/reproducible-path/resolver-c5qbbi/apt_archive/sbuild-build-depends-main-dummy.deb'. Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies +------------------------------------------------------------------------------+ | Check architectures Wed, 14 Jan 2026 21:00:23 +0000 | +------------------------------------------------------------------------------+ Arch check ok (arm64 included in any all) +------------------------------------------------------------------------------+ | Build environment Wed, 14 Jan 2026 21:00:23 +0000 | +------------------------------------------------------------------------------+ Kernel: Linux 6.12.63+deb13-cloud-arm64 #1 SMP Debian 6.12.63-1 (2025-12-30) arm64 (aarch64) Toolchain package versions: binutils_2.45.50.20251209-1 dpkg-dev_1.23.3 g++-15_15.2.0-12 gcc-15_15.2.0-12 libc6-dev_2.42-7 libstdc++-15-dev_15.2.0-12 libstdc++6_15.2.0-12 linux-libc-dev_6.18.3-1 Package versions: architecture-properties_0.2.6 autoconf_2.72-3.1 automake_1:1.18.1-3 autopoint_0.23.2-1 autotools-dev_20240727.1 base-files_14 base-passwd_3.6.8 bash_5.3-1 binutils_2.45.50.20251209-1 binutils-aarch64-linux-gnu_2.45.50.20251209-1 binutils-common_2.45.50.20251209-1 bsdextrautils_2.41.3-3 build-essential_12.12 bzip2_1.0.8-6 cmake_4.1.1+really3.31.6-2 cmake-data_4.1.1+really3.31.6-2 coreutils_9.7-3 cpp_4:15.2.0-4 cpp-15_15.2.0-12 cpp-15-aarch64-linux-gnu_15.2.0-12 cpp-aarch64-linux-gnu_4:15.2.0-4 dash_0.5.12-12 debconf_1.5.91 debhelper_13.29 debianutils_5.23.2 dh-autoreconf_21 dh-strip-nondeterminism_1.15.0-1 diffutils_1:3.12-1 dpkg_1.23.3 dpkg-dev_1.23.3 dwz_0.16-2 file_1:5.46-5 findutils_4.10.0-3 g++_4:15.2.0-4 g++-15_15.2.0-12 g++-15-aarch64-linux-gnu_15.2.0-12 g++-aarch64-linux-gnu_4:15.2.0-4 gcc_4:15.2.0-4 gcc-15_15.2.0-12 gcc-15-aarch64-linux-gnu_15.2.0-12 gcc-15-base_15.2.0-12 gcc-aarch64-linux-gnu_4:15.2.0-4 gettext_0.23.2-1 gettext-base_0.23.2-1 grep_3.12-1 groff-base_1.23.0-10 gzip_1.13-1 hostname_3.25 init-system-helpers_1.69 intltool-debian_0.35.0+20060710.6 libacl1_2.3.2-2+b1 libarchive-zip-perl_1.68-1 libarchive13t64_3.8.4-1 libasan8_15.2.0-12 libatomic1_15.2.0-12 libattr1_1:2.5.2-3 libaudit-common_1:4.1.2-1 libaudit1_1:4.1.2-1+b1 libbinutils_2.45.50.20251209-1 libblkid1_2.41.3-3 libboost-dev_1.83.0.2+b2 libboost1.83-dev_1.83.0-5+b1 libbrotli1_1.1.0-2+b9 libbz2-1.0_1.0.8-6 libbz2-dev_1.0.8-6 libc-bin_2.42-7 libc-dev-bin_2.42-7 libc-gconv-modules-extra_2.42-7 libc6_2.42-7 libc6-dev_2.42-7 libcap-ng0_0.8.5-4+b2 libcap2_1:2.75-10+b5 libcc1-0_15.2.0-12 libcom-err2_1.47.2-3+b8 libcrypt1_1:4.5.1-1 libctf-nobfd0_2.45.50.20251209-1 libctf0_2.45.50.20251209-1 libcurl4t64_8.18.0-1 libdb5.3t64_5.3.28+dfsg2-11 libdebconfclient0_0.282+b2 libdebhelper-perl_13.29 libdpkg-perl_1.23.3 libelf1t64_0.194-1 libexpat1_2.7.3-1 libffi8_3.5.2-3 libfile-stripnondeterminism-perl_1.15.0-1 libgcc-15-dev_15.2.0-12 libgcc-s1_15.2.0-12 libgdbm-compat4t64_1.26-1 libgdbm6t64_1.26-1 libgmp10_2:6.3.0+dfsg-5 libgnutls30t64_3.8.11-3 libgomp1_15.2.0-12 libgprofng0_2.45.50.20251209-1 libgssapi-krb5-2_1.22.1-2 libhogweed6t64_3.10.2-1 libhwasan0_15.2.0-12 libidn2-0_2.3.8-4 libisl23_0.27-1 libitm1_15.2.0-12 libjansson4_2.14-2+b4 libjsoncpp26_1.9.6-5 libk5crypto3_1.22.1-2 libkeyutils1_1.6.3-6 libkrb5-3_1.22.1-2 libkrb5support0_1.22.1-2 libldap2_2.6.10+dfsg-1 liblsan0_15.2.0-12 liblz4-1_1.10.0-6 liblzma5_5.8.2-1 libmagic-mgc_1:5.46-5 libmagic1t64_1:5.46-5 libmd0_1.1.0-2+b1 libmount1_2.41.3-3 libmpc3_1.3.1-2 libmpfr6_4.2.2-2 libncursesw6_6.6+20251231-1 libnettle8t64_3.10.2-1 libnghttp2-14_1.64.0-1.1+b1 libnghttp3-9_1.12.0-1 libngtcp2-16_1.16.0-1 libngtcp2-crypto-ossl0_1.16.0-1 libp11-kit0_0.25.10-1 libpam-modules_1.7.0-5 libpam-modules-bin_1.7.0-5 libpam-runtime_1.7.0-5 libpam0g_1.7.0-5 libpcre2-8-0_10.46-1 libperl5.40_5.40.1-7 libpipeline1_1.5.8-2 libproc2-0_2:4.0.4-9 libpsl5t64_0.21.2-1.1+b1 libpython3-stdlib_3.13.9-2 libpython3.13-minimal_3.13.11-1+b1 libpython3.13-stdlib_3.13.11-1+b1 libreadline8t64_8.3-3 librhash1_1.4.6-1.1 librtmp1_2.4+20151223.gitfa8646d.1-3 libsasl2-2_2.1.28+dfsg1-10 libsasl2-modules-db_2.1.28+dfsg1-10 libseccomp2_2.6.0-2+b1 libselinux1_3.9-4+b1 libsframe2_2.45.50.20251209-1 libsmartcols1_2.41.3-3 libsqlite3-0_3.46.1-8 libssh2-1t64_1.11.1-1 libssl3t64_3.5.4-1 libstdc++-15-dev_15.2.0-12 libstdc++6_15.2.0-12 libsystemd0_259-1 libtasn1-6_4.20.0-2 libtinfo6_6.6+20251231-1 libtool_2.5.4-9 libtsan2_15.2.0-12 libubsan1_15.2.0-12 libuchardet0_0.0.8-2 libudev1_259-1 libunistring5_1.3-2 libuuid1_2.41.3-3 libuv1t64_1.51.0-2 libxml2-16_2.15.1+dfsg-2+b1 libxxhash0_0.8.3-2 libzstd1_1.5.7+dfsg-3 linux-libc-dev_6.18.3-1 m4_1.4.20-2 make_4.4.1-3 man-db_2.13.1-1 mawk_1.3.4.20250131-2 media-types_14.0.0 ncurses-base_6.6+20251231-1 ncurses-bin_6.6+20251231-1 netbase_6.5 openssl-provider-legacy_3.5.4-1 patch_2.8-2 perl_5.40.1-7 perl-base_5.40.1-7 perl-modules-5.40_5.40.1-7 po-debconf_1.0.22 procps_2:4.0.4-9 python3_3.13.9-2 python3-minimal_3.13.9-2 python3.13_3.13.11-1+b1 python3.13-minimal_3.13.11-1+b1 readline-common_8.3-3 rpcsvc-proto_1.4.3-1+b1 sed_4.9-2+b1 sensible-utils_0.0.26 sysvinit-utils_3.15-6 tar_1.35+dfsg-3.1 tzdata_2025c-3 util-linux_2.41.3-3 xz-utils_5.8.2-1 zlib1g_1:1.3.dfsg+really1.3.1-1+b2 zlib1g-dev_1:1.3.dfsg+really1.3.1-1+b2 +------------------------------------------------------------------------------+ | Build Wed, 14 Jan 2026 21:00:23 +0000 | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: seqan2 Binary: seqan-apps, libseqan2-dev Architecture: any all Version: 2.5.2-1 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille , Michael R. Crusoe , Kevin Murray Homepage: https://www.seqan.de/ Standards-Version: 4.7.3 Vcs-Browser: https://salsa.debian.org/med-team/seqan2 Vcs-Git: https://salsa.debian.org/med-team/seqan2.git Testsuite: autopkgtest Testsuite-Triggers: @builddeps@, libbam-dev, libboost-dev, libbz2-dev, zlib1g-dev Build-Depends: debhelper-compat (= 13), architecture-is-64-bit, python3 , cmake Build-Depends-Arch: zlib1g-dev, libbz2-dev, libboost-dev Package-List: libseqan2-dev deb libdevel optional arch=all seqan-apps deb science optional arch=any Checksums-Sha1: 040de3afde4ec51e8842c1f83da4450e52230c47 84960384 seqan2_2.5.2.orig.tar.xz 8dd763328db1fbb9f156439a9c72017edccaed31 13676 seqan2_2.5.2-1.debian.tar.xz Checksums-Sha256: 1a1c19a548490c59172c19a096ef2fe97136445dc0faea3227c389319c589439 84960384 seqan2_2.5.2.orig.tar.xz 407a1303c9fe6d73587b29154f5efd044a58f4d153584add8672000d8237b3d1 13676 seqan2_2.5.2-1.debian.tar.xz Files: 78dd1fe730d352d42bd98e81e99065c5 84960384 seqan2_2.5.2.orig.tar.xz 23a4c4eeedf4b4573f6b88791ac581ac 13676 seqan2_2.5.2-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJGBAEBCgAwFiEEck1gkzcRPHEFUNdHPCZ2P2xn5uIFAmlhCk8SHGNydXNvZUBk ZWJpYW4ub3JnAAoJEDwmdj9sZ+biyUoQAIiVzWGaqicIh/okQjW4NB6cpgt/Ca9B wfsBSmJqG/v7TAk4snXzJuOweeYbsiYmEVmzVjZQK3f28vZ1Df794N51d5zq9+14 SDnhPxzkmOLo9QRElkZOC2p29cBgk/ALpCIBr8VnVIEj7+TQXa2ayxdiuqS2c/dX 7iNB8gIK3ZCMySoNbsZp6Jz/oqEt3ChLYMJvYy8uqT+LI63IEDpk+0QoxMQ5oL29 QByumtmTuE61HeOcfXP3/3Q8pQYb52Pkrmx9Uj4mqVhmEBOaVEvTqBtP0VHbcuU6 b2yR6T6ZN0lYO1GlBbZSVL4+U424E0mSXLHywYH7ThtHd21wLTa4bsW9strNloqA DCs+/wsZlxcrsNkqXBBg3IXzxnu0NibxVXfrBGd85o/j90KSDudNz1U0dimnUUzi +3ovBzdhBRjH281etkhCbCFNUSqSxnfX0TiI3fqNaIhU/GJn3Izd90jAdxbzR0Us 5MLDjC+RpePSjRQVNEt+ytx/GbtPmfTdoJUEjpEs9M20i2ekcZ0Xqa3NS4uX6lNq r2Db4aMGzlEsznyngUVM9ozSaQWdSc41P8EcBI8KLcUy99oNNavhsex4tnqVjrlD 1NMGshnYoPMGQztenMCbmhTND7k0ICsTzouTsTaiwYFppIKqZdRggaD2kVtoxDGo JnRP0oHQpM5A =UyB7 -----END PGP SIGNATURE----- dpkg-source: warning: cannot verify inline signature for ./seqan2_2.5.2-1.dsc: missing OpenPGP keyrings dpkg-source: info: verifying ./seqan2_2.5.2-1.dsc dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-keyring.pgp dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-tag2upload.pgp dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-nonupload.pgp dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-maintainers.pgp dpkg-source: info: extracting seqan2 in /build/reproducible-path/seqan2-2.5.2 dpkg-source: info: unpacking seqan2_2.5.2.orig.tar.xz dpkg-source: info: unpacking seqan2_2.5.2-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying tweak_readmes dpkg-source: info: applying cmake4.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=8 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LC_COLLATE=C.UTF-8 LC_CTYPE=C.UTF-8 LOGNAME=sbuild PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SHELL=/bin/sh SOURCE_DATE_EPOCH=1767948346 USER=sbuild dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -us -uc -B dpkg-buildpackage: info: source package seqan2 dpkg-buildpackage: info: source version 2.5.2-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Michael R. Crusoe dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean debian/rules execute_after_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/seqan2-2.5.2' find . -type f -name "*.pyc" -delete if [ -d orig ] ; then \ for header in `find orig -name "*generated_forwards.h"` ; do \ mv ${header} `echo $header | sed 's?orig/??'` ; \ done ; \ fi rm -rf orig make[1]: Leaving directory '/build/reproducible-path/seqan2-2.5.2' dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/seqan-apps.substvars debian/libseqan2-dev.substvars debian/files rm -fr -- debian/seqan-apps/ debian/tmp/ debian/libseqan2-dev/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \) debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a debian/rules override_dh_auto_configure-arch make[1]: Entering directory '/build/reproducible-path/seqan2-2.5.2' export DEB_BUILD_ARCH=arm64 ; \ dh_auto_configure --arch -- \ -DSEQAN_STATIC_APPS=False -DSEQAN_NO_DOX=1 \ -DSEQAN_DISABLE_VERSION_CHECK=YES \ -DALIGN_SIMD_TEST=FALSE \ -DSEQAN_STRIP_APPS_BUILD_PATH="/build/reproducible-path/seqan2-2.5.2" \ -DSEQAN_NO_DOX=1 cd obj-aarch64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/aarch64-linux-gnu -DSEQAN_STATIC_APPS=False -DSEQAN_NO_DOX=1 -DSEQAN_DISABLE_VERSION_CHECK=YES -DALIGN_SIMD_TEST=FALSE -DSEQAN_STRIP_APPS_BUILD_PATH=/build/reproducible-path/seqan2-2.5.2 -DSEQAN_NO_DOX=1 .. -- The CXX compiler identification is GNU 15.2.0 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Initializing SeqAn Build System... -- Scanning dependencies once in DEVELOP mode... -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") -- Found ZLIB: /usr/lib/aarch64-linux-gnu/libz.so (found version "1.3.1") -- Found BZip2: /usr/lib/aarch64-linux-gnu/libbz2.so (found version "1.0.8") -- Looking for BZ2_bzCompressInit -- Looking for BZ2_bzCompressInit - found -- Performing Test CXX14_BUILTIN -- Performing Test CXX14_BUILTIN - Success -- Looking for C++ include execinfo.h -- Looking for C++ include execinfo.h - found -- Found SeqAn: /build/reproducible-path/seqan2-2.5.2/include (found version "2.5.2") -- Could NOT find LibXml2 (missing: LIBXML2_LIBRARY LIBXML2_INCLUDE_DIR) -- Detected git repository: -- Selected repository dir: /build/reproducible-path/seqan2-2.5.2 -- No revision system found. -- Repository date not determined. -- Repository revision not determined. -- Found Python3: /usr/bin/python3 (found version "3.13.11") found components: Interpreter -- Configuring tests -- Configuring tests -- Configuring tests/align -- Configuring tests/align_extend -- Configuring tests/align_parallel -- Could NOT find SDE: Intel(R) Software Development Emulator (sde) (missing: SDE_EXECUTABLE SDE_VERSION_STRING) -- Could NOT find Umesimd (missing: UMESIMD_INCLUDE_DIR) -- Performing Test SSE4_SOURCE_RUNS -- Performing Test SSE4_SOURCE_RUNS - Failed -- => Abort simd detection of newer instruction sets -- Performing Test SEQAN_SIMD_SEQANSIMD_SUPPORTED -- Performing Test SEQAN_SIMD_SEQANSIMD_SUPPORTED - Success -- Performing Test SEQANSIMD_AVX512_SKX_SOURCE_RUNS -- Performing Test SEQANSIMD_AVX512_SKX_SOURCE_RUNS - Failed -- Intel Software Development Emulator not found, not building platform emulated tests. -- Intel Software Development Emulator not found, not building platform emulated tests. -- Configuring tests/align_profile -- Configuring tests/align_split -- Configuring tests/alignment_free -- Configuring tests/arg_parse -- Configuring tests/bam_io -- Configuring tests/basic -- Configuring tests/bed_io -- Configuring tests/blast -- Configuring tests/consensus -- Configuring tests/consensus_v2 -- Configuring tests/find -- Configuring tests/gff_io -- Configuring tests/graph_algorithms -- Configuring tests/graph_align -- Configuring tests/graph_msa -- Configuring tests/graph_types -- Configuring tests/index -- Configuring tests/journaled_set -- Configuring tests/journaled_string_tree -- Configuring tests/map -- Configuring tests/misc -- Configuring tests/modifier -- Configuring tests/modifier_cyclic_shape -- Configuring tests/multiple_translation_units -- Configuring tests/parallel -- Configuring tests/parse_lm -- Configuring tests/pipe -- Configuring tests/platform -- Configuring tests/random -- Configuring tests/realign -- Configuring tests/reduced_aminoacid -- Configuring tests/rna_io -- Configuring tests/roi_io -- Configuring tests/score -- Configuring tests/seeds -- Configuring tests/seq_io -- Configuring tests/sequence -- Configuring tests/sequence_journaled -- Configuring tests/simd -- Could NOT find SDE: Intel(R) Software Development Emulator (sde) (missing: SDE_EXECUTABLE SDE_VERSION_STRING) -- Could NOT find Umesimd (missing: UMESIMD_INCLUDE_DIR) -- Intel Software Development Emulator not found, not building platform emulated tests. -- Configuring tests/simple_intervals_io -- Configuring tests/statistics -- Configuring tests/store -- Configuring tests/stream -- Configuring tests/find_swift -- Configuring tests/tabix_io -- Configuring tests/translation -- Configuring tests/test_ucsc_io -- Configuring tests/vcf_io -- Configuring demos -- Configuring apps -- Configuring apps/alf -- CTD testing was not configured. -- Configuring apps/bs_tools -- CTD testing was not configured. -- CTD testing was not configured. -- CTD testing was not configured. -- Configuring apps/dfi -- CTD testing was not configured. -- Configuring apps/fiona -- CTD testing was not configured. -- CTD testing was not configured. -- CTD testing was not configured. -- Configuring apps/fx_tools -- CTD testing was not configured. -- CTD testing was not configured. -- Configuring apps/gustaf -- Configuring apps/insegt -- CTD testing was not configured. -- Configuring apps/mason2 -- CTD testing was not configured. -- CTD testing was not configured. -- CTD testing was not configured. -- CTD testing was not configured. -- CTD testing was not configured. -- Configuring apps/micro_razers -- Configuring apps/ngs_roi -- Configuring apps/pair_align -- Configuring apps/param_chooser -- Configuring apps/rabema -- CTD testing was not configured. -- CTD testing was not configured. -- CTD testing was not configured. -- Configuring apps/razers -- Configuring apps/razers3 -- CTD testing was not configured. -- Configuring apps/rep_sep -- Configuring apps/sak -- CTD testing was not configured. -- Configuring apps/sam2matrix -- CTD testing was not configured. -- Configuring apps/samcat -- CTD testing was not configured. -- Configuring apps/searchjoin -- Configuring apps/seqan_tcoffee -- CTD testing was not configured. -- Configuring apps/seqcons2 -- Configuring apps/sgip -- Configuring apps/snp_store -- CTD testing was not configured. -- Configuring apps/splazers -- Configuring apps/stellar -- CTD testing was not configured. -- Configuring apps/tree_recon -- CTD testing was not configured. -- Configuring apps/yara -- CTD testing was not configured. -- CTD testing was not configured. -- Configuring done (2.1s) -- Generating done (1.2s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu make[1]: Leaving directory '/build/reproducible-path/seqan2-2.5.2' dh_auto_build -a cd obj-aarch64-linux-gnu && make -j8 INSTALL="install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/seqan2-2.5.2 -B/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/CMakeFiles /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f CMakeFiles/seqan_library.dir/build.make CMakeFiles/seqan_library.dir/depend make -f apps/mason2/CMakeFiles/mason_sim.dir/build.make apps/mason2/CMakeFiles/mason_sim.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/CMakeFiles/seqan_library.dir/DependInfo.cmake "--color=" make -f apps/pair_align/lib/CMakeFiles/pair_align_global_1111.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_1111.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/mason2 /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/mason2 /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/mason2/CMakeFiles/mason_sim.dir/DependInfo.cmake "--color=" make -f apps/pair_align/lib/CMakeFiles/pair_align_lcs.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_lcs.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/pair_align/lib /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib/CMakeFiles/pair_align_global_1111.dir/DependInfo.cmake "--color=" make -f apps/pair_align/lib/CMakeFiles/pair_align_local.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_local.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/pair_align/lib /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib 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apps/pair_align/lib/CMakeFiles/pair_align_global_0001.dir/depend make -f apps/pair_align/lib/CMakeFiles/pair_align_global_0010.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_0010.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/pair_align/lib /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib/CMakeFiles/pair_align_global_0000.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/pair_align/lib /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib/CMakeFiles/pair_align_global_0001.dir/DependInfo.cmake "--color=" make -f CMakeFiles/seqan_library.dir/build.make CMakeFiles/seqan_library.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/pair_align/lib /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib/CMakeFiles/pair_align_global_0010.dir/DependInfo.cmake "--color=" make -f apps/pair_align/lib/CMakeFiles/pair_align_global_1111.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_1111.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make[3]: Nothing to be done for 'CMakeFiles/seqan_library.dir/build'. make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/pair_align/lib/CMakeFiles/pair_align_local.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_local.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/mason2/CMakeFiles/mason_sim.dir/build.make apps/mason2/CMakeFiles/mason_sim.dir/build make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/pair_align/lib/CMakeFiles/pair_align_lcs.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_lcs.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 0%] Building CXX object apps/pair_align/lib/CMakeFiles/pair_align_local.dir/pair_align_local.cpp.o [ 0%] Building CXX object apps/pair_align/lib/CMakeFiles/pair_align_global_1111.dir/pair_align_global.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.3.12\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -DSUFFIX_GAP_BOTTOM=1 -DSUFFIX_GAP_LEFT=1 -DSUFFIX_GAP_RIGHT=1 -DSUFFIX_GAP_TOP=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -MD -MT apps/pair_align/lib/CMakeFiles/pair_align_global_1111.dir/pair_align_global.cpp.o -MF CMakeFiles/pair_align_global_1111.dir/pair_align_global.cpp.o.d -o CMakeFiles/pair_align_global_1111.dir/pair_align_global.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/pair_align/lib/pair_align_global.cpp make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/pair_align/lib/CMakeFiles/pair_align_global_0000.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_0000.dir/build cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.3.12\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 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'/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/mason2 && /usr/bin/c++ -DSEQAN_APP_VERSION=\"2.0.13\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT apps/mason2/CMakeFiles/mason_sim.dir/external_split_merge.cpp.o -MF CMakeFiles/mason_sim.dir/external_split_merge.cpp.o.d -o CMakeFiles/mason_sim.dir/external_split_merge.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/mason2/external_split_merge.cpp make -f apps/pair_align/lib/CMakeFiles/pair_align_global_0011.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_0011.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/pair_align/lib /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib/CMakeFiles/pair_align_global_0011.dir/DependInfo.cmake "--color=" [ 0%] Building CXX object apps/pair_align/lib/CMakeFiles/pair_align_lcs.dir/pair_align_lcs.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.3.12\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -MD -MT apps/pair_align/lib/CMakeFiles/pair_align_lcs.dir/pair_align_lcs.cpp.o -MF CMakeFiles/pair_align_lcs.dir/pair_align_lcs.cpp.o.d -o CMakeFiles/pair_align_lcs.dir/pair_align_lcs.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/pair_align/lib/pair_align_lcs.cpp [ 0%] Building CXX object apps/pair_align/lib/CMakeFiles/pair_align_global_0000.dir/pair_align_global.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.3.12\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -DSUFFIX_GAP_BOTTOM=0 -DSUFFIX_GAP_LEFT=0 -DSUFFIX_GAP_RIGHT=0 -DSUFFIX_GAP_TOP=0 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -MD -MT apps/pair_align/lib/CMakeFiles/pair_align_global_0000.dir/pair_align_global.cpp.o -MF CMakeFiles/pair_align_global_0000.dir/pair_align_global.cpp.o.d -o CMakeFiles/pair_align_global_0000.dir/pair_align_global.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/pair_align/lib/pair_align_global.cpp [ 0%] Building CXX object apps/pair_align/lib/CMakeFiles/pair_align_global_0010.dir/pair_align_global.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.3.12\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -DSUFFIX_GAP_BOTTOM=0 -DSUFFIX_GAP_LEFT=0 -DSUFFIX_GAP_RIGHT=1 -DSUFFIX_GAP_TOP=0 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -MD -MT apps/pair_align/lib/CMakeFiles/pair_align_global_0010.dir/pair_align_global.cpp.o -MF CMakeFiles/pair_align_global_0010.dir/pair_align_global.cpp.o.d -o CMakeFiles/pair_align_global_0010.dir/pair_align_global.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/pair_align/lib/pair_align_global.cpp [ 0%] Building CXX object apps/pair_align/lib/CMakeFiles/pair_align_global_0001.dir/pair_align_global.cpp.o make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/pair_align/lib/CMakeFiles/pair_align_global_0011.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_0011.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.3.12\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -DSUFFIX_GAP_BOTTOM=1 -DSUFFIX_GAP_LEFT=0 -DSUFFIX_GAP_RIGHT=0 -DSUFFIX_GAP_TOP=0 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -MD -MT apps/pair_align/lib/CMakeFiles/pair_align_global_0001.dir/pair_align_global.cpp.o -MF CMakeFiles/pair_align_global_0001.dir/pair_align_global.cpp.o.d -o CMakeFiles/pair_align_global_0001.dir/pair_align_global.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/pair_align/lib/pair_align_global.cpp [ 0%] Building CXX object apps/pair_align/lib/CMakeFiles/pair_align_global_0011.dir/pair_align_global.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.3.12\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -DSUFFIX_GAP_BOTTOM=1 -DSUFFIX_GAP_LEFT=0 -DSUFFIX_GAP_RIGHT=1 -DSUFFIX_GAP_TOP=0 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -MD -MT apps/pair_align/lib/CMakeFiles/pair_align_global_0011.dir/pair_align_global.cpp.o -MF CMakeFiles/pair_align_global_0011.dir/pair_align_global.cpp.o.d -o CMakeFiles/pair_align_global_0011.dir/pair_align_global.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/pair_align/lib/pair_align_global.cpp [ 0%] Building CXX object apps/mason2/CMakeFiles/mason_sim.dir/genomic_variants.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/mason2 && /usr/bin/c++ -DSEQAN_APP_VERSION=\"2.0.13\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT apps/mason2/CMakeFiles/mason_sim.dir/genomic_variants.cpp.o -MF CMakeFiles/mason_sim.dir/genomic_variants.cpp.o.d -o CMakeFiles/mason_sim.dir/genomic_variants.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/mason2/genomic_variants.cpp [ 0%] Building CXX object apps/mason2/CMakeFiles/mason_sim.dir/mason_options.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/mason2 && /usr/bin/c++ -DSEQAN_APP_VERSION=\"2.0.13\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT apps/mason2/CMakeFiles/mason_sim.dir/mason_options.cpp.o -MF CMakeFiles/mason_sim.dir/mason_options.cpp.o.d -o CMakeFiles/mason_sim.dir/mason_options.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/mason2/mason_options.cpp make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 0%] Built target pair_align_lcs make -f apps/pair_align/lib/CMakeFiles/pair_align_global_0100.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_0100.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/pair_align/lib /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib/CMakeFiles/pair_align_global_0100.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/pair_align/lib/CMakeFiles/pair_align_global_0100.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_0100.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 0%] Building CXX object apps/pair_align/lib/CMakeFiles/pair_align_global_0100.dir/pair_align_global.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.3.12\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -DSUFFIX_GAP_BOTTOM=0 -DSUFFIX_GAP_LEFT=1 -DSUFFIX_GAP_RIGHT=0 -DSUFFIX_GAP_TOP=0 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -MD -MT apps/pair_align/lib/CMakeFiles/pair_align_global_0100.dir/pair_align_global.cpp.o -MF CMakeFiles/pair_align_global_0100.dir/pair_align_global.cpp.o.d -o CMakeFiles/pair_align_global_0100.dir/pair_align_global.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/pair_align/lib/pair_align_global.cpp [ 0%] Building CXX object apps/mason2/CMakeFiles/mason_sim.dir/methylation_levels.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/mason2 && /usr/bin/c++ -DSEQAN_APP_VERSION=\"2.0.13\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT apps/mason2/CMakeFiles/mason_sim.dir/methylation_levels.cpp.o -MF CMakeFiles/mason_sim.dir/methylation_levels.cpp.o.d -o CMakeFiles/mason_sim.dir/methylation_levels.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/mason2/methylation_levels.cpp [ 1%] Building CXX object apps/mason2/CMakeFiles/mason_sim.dir/simulate_454.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/mason2 && /usr/bin/c++ -DSEQAN_APP_VERSION=\"2.0.13\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT apps/mason2/CMakeFiles/mason_sim.dir/simulate_454.cpp.o -MF CMakeFiles/mason_sim.dir/simulate_454.cpp.o.d -o CMakeFiles/mason_sim.dir/simulate_454.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/mason2/simulate_454.cpp [ 1%] Building CXX object apps/mason2/CMakeFiles/mason_sim.dir/simulate_base.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/mason2 && /usr/bin/c++ -DSEQAN_APP_VERSION=\"2.0.13\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT apps/mason2/CMakeFiles/mason_sim.dir/simulate_base.cpp.o -MF CMakeFiles/mason_sim.dir/simulate_base.cpp.o.d -o CMakeFiles/mason_sim.dir/simulate_base.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/mason2/simulate_base.cpp make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 1%] Built target pair_align_global_0000 [ 1%] Building CXX object apps/mason2/CMakeFiles/mason_sim.dir/simulate_genome.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/mason2 && /usr/bin/c++ -DSEQAN_APP_VERSION=\"2.0.13\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT apps/mason2/CMakeFiles/mason_sim.dir/simulate_genome.cpp.o -MF CMakeFiles/mason_sim.dir/simulate_genome.cpp.o.d -o CMakeFiles/mason_sim.dir/simulate_genome.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/mason2/simulate_genome.cpp make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 1%] Built target pair_align_global_0010 [ 1%] Building CXX object apps/mason2/CMakeFiles/mason_sim.dir/simulate_illumina.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/mason2 && /usr/bin/c++ -DSEQAN_APP_VERSION=\"2.0.13\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT apps/mason2/CMakeFiles/mason_sim.dir/simulate_illumina.cpp.o -MF CMakeFiles/mason_sim.dir/simulate_illumina.cpp.o.d -o CMakeFiles/mason_sim.dir/simulate_illumina.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/mason2/simulate_illumina.cpp make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 1%] Built target pair_align_global_0011 [ 1%] Building CXX object apps/mason2/CMakeFiles/mason_sim.dir/simulate_sanger.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/mason2 && /usr/bin/c++ -DSEQAN_APP_VERSION=\"2.0.13\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT apps/mason2/CMakeFiles/mason_sim.dir/simulate_sanger.cpp.o -MF CMakeFiles/mason_sim.dir/simulate_sanger.cpp.o.d -o CMakeFiles/mason_sim.dir/simulate_sanger.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/mason2/simulate_sanger.cpp make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 1%] Built target pair_align_global_0001 [ 1%] Building CXX object apps/mason2/CMakeFiles/mason_sim.dir/vcf_materialization.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/mason2 && /usr/bin/c++ -DSEQAN_APP_VERSION=\"2.0.13\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT apps/mason2/CMakeFiles/mason_sim.dir/vcf_materialization.cpp.o -MF CMakeFiles/mason_sim.dir/vcf_materialization.cpp.o.d -o CMakeFiles/mason_sim.dir/vcf_materialization.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/mason2/vcf_materialization.cpp make -f apps/pair_align/lib/CMakeFiles/pair_align_global_0101.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_0101.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/pair_align/lib /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib/CMakeFiles/pair_align_global_0101.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/pair_align/lib/CMakeFiles/pair_align_global_0101.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_0101.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 2%] Building CXX object apps/pair_align/lib/CMakeFiles/pair_align_global_0101.dir/pair_align_global.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.3.12\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -DSUFFIX_GAP_BOTTOM=1 -DSUFFIX_GAP_LEFT=1 -DSUFFIX_GAP_RIGHT=0 -DSUFFIX_GAP_TOP=0 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -MD -MT apps/pair_align/lib/CMakeFiles/pair_align_global_0101.dir/pair_align_global.cpp.o -MF CMakeFiles/pair_align_global_0101.dir/pair_align_global.cpp.o.d -o CMakeFiles/pair_align_global_0101.dir/pair_align_global.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/pair_align/lib/pair_align_global.cpp make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 2%] Built target pair_align_global_1111 make -f apps/pair_align/lib/CMakeFiles/pair_align_global_0110.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_0110.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/pair_align/lib /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib/CMakeFiles/pair_align_global_0110.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/pair_align/lib/CMakeFiles/pair_align_global_0110.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_0110.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 2%] Building CXX object apps/pair_align/lib/CMakeFiles/pair_align_global_0110.dir/pair_align_global.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.3.12\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -DSUFFIX_GAP_BOTTOM=0 -DSUFFIX_GAP_LEFT=1 -DSUFFIX_GAP_RIGHT=1 -DSUFFIX_GAP_TOP=0 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -MD -MT apps/pair_align/lib/CMakeFiles/pair_align_global_0110.dir/pair_align_global.cpp.o -MF CMakeFiles/pair_align_global_0110.dir/pair_align_global.cpp.o.d -o CMakeFiles/pair_align_global_0110.dir/pair_align_global.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/pair_align/lib/pair_align_global.cpp make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 2%] Built target pair_align_local make -f apps/pair_align/lib/CMakeFiles/pair_align_global_0111.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_0111.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/pair_align/lib /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib/CMakeFiles/pair_align_global_0111.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/pair_align/lib/CMakeFiles/pair_align_global_0111.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_0111.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 2%] Building CXX object apps/pair_align/lib/CMakeFiles/pair_align_global_0111.dir/pair_align_global.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.3.12\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -DSUFFIX_GAP_BOTTOM=1 -DSUFFIX_GAP_LEFT=1 -DSUFFIX_GAP_RIGHT=1 -DSUFFIX_GAP_TOP=0 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -MD -MT apps/pair_align/lib/CMakeFiles/pair_align_global_0111.dir/pair_align_global.cpp.o -MF CMakeFiles/pair_align_global_0111.dir/pair_align_global.cpp.o.d -o CMakeFiles/pair_align_global_0111.dir/pair_align_global.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/pair_align/lib/pair_align_global.cpp make -f apps/pair_align/lib/CMakeFiles/pair_align_global_1000.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_1000.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/pair_align/lib /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib/CMakeFiles/pair_align_global_1000.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/pair_align/lib/CMakeFiles/pair_align_global_1000.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_1000.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 2%] Building CXX object apps/pair_align/lib/CMakeFiles/pair_align_global_1000.dir/pair_align_global.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.3.12\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -DSUFFIX_GAP_BOTTOM=0 -DSUFFIX_GAP_LEFT=0 -DSUFFIX_GAP_RIGHT=0 -DSUFFIX_GAP_TOP=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -MD -MT apps/pair_align/lib/CMakeFiles/pair_align_global_1000.dir/pair_align_global.cpp.o -MF CMakeFiles/pair_align_global_1000.dir/pair_align_global.cpp.o.d -o CMakeFiles/pair_align_global_1000.dir/pair_align_global.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/pair_align/lib/pair_align_global.cpp make -f apps/pair_align/lib/CMakeFiles/pair_align_global_1001.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_1001.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/pair_align/lib /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib/CMakeFiles/pair_align_global_1001.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/pair_align/lib/CMakeFiles/pair_align_global_1001.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_1001.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 2%] Building CXX object apps/pair_align/lib/CMakeFiles/pair_align_global_1001.dir/pair_align_global.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.3.12\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -DSUFFIX_GAP_BOTTOM=1 -DSUFFIX_GAP_LEFT=0 -DSUFFIX_GAP_RIGHT=0 -DSUFFIX_GAP_TOP=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -MD -MT apps/pair_align/lib/CMakeFiles/pair_align_global_1001.dir/pair_align_global.cpp.o -MF CMakeFiles/pair_align_global_1001.dir/pair_align_global.cpp.o.d -o CMakeFiles/pair_align_global_1001.dir/pair_align_global.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/pair_align/lib/pair_align_global.cpp make -f apps/pair_align/lib/CMakeFiles/pair_align_global_1010.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_1010.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/pair_align/lib /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib/CMakeFiles/pair_align_global_1010.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/pair_align/lib/CMakeFiles/pair_align_global_1010.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_1010.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 2%] Building CXX object apps/pair_align/lib/CMakeFiles/pair_align_global_1010.dir/pair_align_global.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.3.12\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -DSUFFIX_GAP_BOTTOM=0 -DSUFFIX_GAP_LEFT=0 -DSUFFIX_GAP_RIGHT=1 -DSUFFIX_GAP_TOP=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -MD -MT apps/pair_align/lib/CMakeFiles/pair_align_global_1010.dir/pair_align_global.cpp.o -MF CMakeFiles/pair_align_global_1010.dir/pair_align_global.cpp.o.d -o CMakeFiles/pair_align_global_1010.dir/pair_align_global.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/pair_align/lib/pair_align_global.cpp [ 2%] Linking CXX static library libmason_sim.a cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/mason2 && /usr/bin/cmake -P CMakeFiles/mason_sim.dir/cmake_clean_target.cmake cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/mason2 && /usr/bin/cmake -E cmake_link_script CMakeFiles/mason_sim.dir/link.txt --verbose=1 /usr/bin/ar qc libmason_sim.a CMakeFiles/mason_sim.dir/external_split_merge.cpp.o CMakeFiles/mason_sim.dir/genomic_variants.cpp.o CMakeFiles/mason_sim.dir/mason_options.cpp.o CMakeFiles/mason_sim.dir/methylation_levels.cpp.o CMakeFiles/mason_sim.dir/simulate_454.cpp.o CMakeFiles/mason_sim.dir/simulate_base.cpp.o CMakeFiles/mason_sim.dir/simulate_genome.cpp.o CMakeFiles/mason_sim.dir/simulate_illumina.cpp.o CMakeFiles/mason_sim.dir/simulate_sanger.cpp.o CMakeFiles/mason_sim.dir/vcf_materialization.cpp.o /usr/bin/ranlib libmason_sim.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 2%] Built target mason_sim make -f apps/pair_align/lib/CMakeFiles/pair_align_global_1011.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_1011.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/pair_align/lib /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib/CMakeFiles/pair_align_global_1011.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/pair_align/lib/CMakeFiles/pair_align_global_1011.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_1011.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 2%] Building CXX object apps/pair_align/lib/CMakeFiles/pair_align_global_1011.dir/pair_align_global.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.3.12\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -DSUFFIX_GAP_BOTTOM=1 -DSUFFIX_GAP_LEFT=0 -DSUFFIX_GAP_RIGHT=1 -DSUFFIX_GAP_TOP=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -MD -MT apps/pair_align/lib/CMakeFiles/pair_align_global_1011.dir/pair_align_global.cpp.o -MF CMakeFiles/pair_align_global_1011.dir/pair_align_global.cpp.o.d -o CMakeFiles/pair_align_global_1011.dir/pair_align_global.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/pair_align/lib/pair_align_global.cpp make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 2%] Built target pair_align_global_0100 make -f apps/pair_align/lib/CMakeFiles/pair_align_global_1100.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_1100.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/pair_align/lib /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib/CMakeFiles/pair_align_global_1100.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/pair_align/lib/CMakeFiles/pair_align_global_1100.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_1100.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 2%] Building CXX object apps/pair_align/lib/CMakeFiles/pair_align_global_1100.dir/pair_align_global.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.3.12\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -DSUFFIX_GAP_BOTTOM=0 -DSUFFIX_GAP_LEFT=1 -DSUFFIX_GAP_RIGHT=0 -DSUFFIX_GAP_TOP=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -MD -MT apps/pair_align/lib/CMakeFiles/pair_align_global_1100.dir/pair_align_global.cpp.o -MF CMakeFiles/pair_align_global_1100.dir/pair_align_global.cpp.o.d -o CMakeFiles/pair_align_global_1100.dir/pair_align_global.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/pair_align/lib/pair_align_global.cpp make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 2%] Built target pair_align_global_0110 make -f apps/pair_align/lib/CMakeFiles/pair_align_global_1101.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_1101.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/pair_align/lib /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib/CMakeFiles/pair_align_global_1101.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/pair_align/lib/CMakeFiles/pair_align_global_1101.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_1101.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 2%] Building CXX object apps/pair_align/lib/CMakeFiles/pair_align_global_1101.dir/pair_align_global.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.3.12\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -DSUFFIX_GAP_BOTTOM=1 -DSUFFIX_GAP_LEFT=1 -DSUFFIX_GAP_RIGHT=0 -DSUFFIX_GAP_TOP=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -MD -MT apps/pair_align/lib/CMakeFiles/pair_align_global_1101.dir/pair_align_global.cpp.o -MF CMakeFiles/pair_align_global_1101.dir/pair_align_global.cpp.o.d -o CMakeFiles/pair_align_global_1101.dir/pair_align_global.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/pair_align/lib/pair_align_global.cpp make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 2%] Built target pair_align_global_0101 make -f apps/pair_align/lib/CMakeFiles/pair_align_global_1110.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_1110.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/pair_align/lib /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib/CMakeFiles/pair_align_global_1110.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/pair_align/lib/CMakeFiles/pair_align_global_1110.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_global_1110.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 2%] Building CXX object apps/pair_align/lib/CMakeFiles/pair_align_global_1110.dir/pair_align_global.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.3.12\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -DSUFFIX_GAP_BOTTOM=0 -DSUFFIX_GAP_LEFT=1 -DSUFFIX_GAP_RIGHT=1 -DSUFFIX_GAP_TOP=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -MD -MT apps/pair_align/lib/CMakeFiles/pair_align_global_1110.dir/pair_align_global.cpp.o -MF CMakeFiles/pair_align_global_1110.dir/pair_align_global.cpp.o.d -o CMakeFiles/pair_align_global_1110.dir/pair_align_global.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/pair_align/lib/pair_align_global.cpp make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 2%] Built target pair_align_global_0111 make -f apps/param_chooser/CMakeFiles/param_chooser.dir/build.make apps/param_chooser/CMakeFiles/param_chooser.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/param_chooser /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/param_chooser /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/param_chooser/CMakeFiles/param_chooser.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/param_chooser/CMakeFiles/param_chooser.dir/build.make apps/param_chooser/CMakeFiles/param_chooser.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 2%] Building CXX object apps/param_chooser/CMakeFiles/param_chooser.dir/param_chooser.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/param_chooser && /usr/bin/c++ -DSEQAN_APP_VERSION=\"0.0.13\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fopenmp -MD -MT apps/param_chooser/CMakeFiles/param_chooser.dir/param_chooser.cpp.o -MF CMakeFiles/param_chooser.dir/param_chooser.cpp.o.d -o CMakeFiles/param_chooser.dir/param_chooser.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/param_chooser/param_chooser.cpp make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 2%] Built target pair_align_global_1000 make -f apps/param_chooser/CMakeFiles/test_funcs_param_chooser.dir/build.make apps/param_chooser/CMakeFiles/test_funcs_param_chooser.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/param_chooser /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/param_chooser /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/param_chooser/CMakeFiles/test_funcs_param_chooser.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/param_chooser/CMakeFiles/test_funcs_param_chooser.dir/build.make apps/param_chooser/CMakeFiles/test_funcs_param_chooser.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 2%] Building CXX object apps/param_chooser/CMakeFiles/test_funcs_param_chooser.dir/test_param_chooser.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/param_chooser && /usr/bin/c++ -DSEQAN_APP_VERSION=\"0.0.13\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fopenmp -MD -MT apps/param_chooser/CMakeFiles/test_funcs_param_chooser.dir/test_param_chooser.cpp.o -MF CMakeFiles/test_funcs_param_chooser.dir/test_param_chooser.cpp.o.d -o CMakeFiles/test_funcs_param_chooser.dir/test_param_chooser.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/param_chooser/test_param_chooser.cpp make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 2%] Built target pair_align_global_1001 make -f apps/rabema/CMakeFiles/rabema_prepare_sam.dir/build.make apps/rabema/CMakeFiles/rabema_prepare_sam.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/rabema /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/rabema /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/rabema/CMakeFiles/rabema_prepare_sam.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/rabema/CMakeFiles/rabema_prepare_sam.dir/build.make apps/rabema/CMakeFiles/rabema_prepare_sam.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 2%] Building CXX object apps/rabema/CMakeFiles/rabema_prepare_sam.dir/prepare_sam.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/rabema && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.2.14\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fopenmp -MD -MT apps/rabema/CMakeFiles/rabema_prepare_sam.dir/prepare_sam.cpp.o -MF CMakeFiles/rabema_prepare_sam.dir/prepare_sam.cpp.o.d -o CMakeFiles/rabema_prepare_sam.dir/prepare_sam.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/rabema/prepare_sam.cpp make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 2%] Built target pair_align_global_1010 make -f apps/rabema/CMakeFiles/rabema_build_gold_standard.dir/build.make apps/rabema/CMakeFiles/rabema_build_gold_standard.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/rabema /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/rabema /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/rabema/CMakeFiles/rabema_build_gold_standard.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/rabema/CMakeFiles/rabema_build_gold_standard.dir/build.make apps/rabema/CMakeFiles/rabema_build_gold_standard.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 2%] Building CXX object apps/rabema/CMakeFiles/rabema_build_gold_standard.dir/rabema_build_gold_standard.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/rabema && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.2.14\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fopenmp -MD -MT apps/rabema/CMakeFiles/rabema_build_gold_standard.dir/rabema_build_gold_standard.cpp.o -MF CMakeFiles/rabema_build_gold_standard.dir/rabema_build_gold_standard.cpp.o.d -o CMakeFiles/rabema_build_gold_standard.dir/rabema_build_gold_standard.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/rabema/rabema_build_gold_standard.cpp make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 2%] Built target pair_align_global_1011 make -f apps/rabema/CMakeFiles/rabema_evaluate.dir/build.make apps/rabema/CMakeFiles/rabema_evaluate.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/rabema /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/rabema /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/rabema/CMakeFiles/rabema_evaluate.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/rabema/CMakeFiles/rabema_evaluate.dir/build.make apps/rabema/CMakeFiles/rabema_evaluate.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 2%] Building CXX object apps/rabema/CMakeFiles/rabema_evaluate.dir/rabema_evaluate.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/rabema && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.2.14\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fopenmp -MD -MT apps/rabema/CMakeFiles/rabema_evaluate.dir/rabema_evaluate.cpp.o -MF CMakeFiles/rabema_evaluate.dir/rabema_evaluate.cpp.o.d -o CMakeFiles/rabema_evaluate.dir/rabema_evaluate.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/rabema/rabema_evaluate.cpp [ 2%] Linking CXX executable ../../bin/test_funcs_param_chooser cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/param_chooser && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_funcs_param_chooser.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_funcs_param_chooser.dir/link.d CMakeFiles/test_funcs_param_chooser.dir/test_param_chooser.cpp.o -o ../../bin/test_funcs_param_chooser -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 2%] Built target test_funcs_param_chooser make -f apps/rabema/CMakeFiles/rabema_do_search.dir/build.make apps/rabema/CMakeFiles/rabema_do_search.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/rabema /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/rabema /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/rabema/CMakeFiles/rabema_do_search.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/rabema/CMakeFiles/rabema_do_search.dir/build.make apps/rabema/CMakeFiles/rabema_do_search.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 2%] Building CXX object apps/rabema/CMakeFiles/rabema_do_search.dir/do_search.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/rabema && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.2.14\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fopenmp -MD -MT apps/rabema/CMakeFiles/rabema_do_search.dir/do_search.cpp.o -MF CMakeFiles/rabema_do_search.dir/do_search.cpp.o.d -o CMakeFiles/rabema_do_search.dir/do_search.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/rabema/do_search.cpp make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 2%] Built target pair_align_global_1100 make -f apps/razers/CMakeFiles/razers.dir/build.make apps/razers/CMakeFiles/razers.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/razers /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/razers /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/razers/CMakeFiles/razers.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/razers/CMakeFiles/razers.dir/build.make apps/razers/CMakeFiles/razers.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 2%] Building CXX object apps/razers/CMakeFiles/razers.dir/razers.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/razers && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.5.12\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fopenmp -MD -MT apps/razers/CMakeFiles/razers.dir/razers.cpp.o -MF CMakeFiles/razers.dir/razers.cpp.o.d -o CMakeFiles/razers.dir/razers.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/razers/razers.cpp [ 2%] Linking CXX executable ../../bin/rabema_do_search cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/rabema && /usr/bin/cmake -E cmake_link_script CMakeFiles/rabema_do_search.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/rabema_do_search.dir/link.d CMakeFiles/rabema_do_search.dir/do_search.cpp.o -o ../../bin/rabema_do_search -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 2%] Built target rabema_do_search [ 2%] Building CXX object apps/razers/CMakeFiles/razers.dir/param_tabs.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/razers && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.5.12\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fopenmp -MD -MT apps/razers/CMakeFiles/razers.dir/param_tabs.cpp.o -MF CMakeFiles/razers.dir/param_tabs.cpp.o.d -o CMakeFiles/razers.dir/param_tabs.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/razers/param_tabs.cpp make -f apps/razers3/CMakeFiles/razers3.dir/build.make apps/razers3/CMakeFiles/razers3.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/razers3 /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/razers3 /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/razers3/CMakeFiles/razers3.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/razers3/CMakeFiles/razers3.dir/build.make apps/razers3/CMakeFiles/razers3.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 2%] Building CXX object apps/razers3/CMakeFiles/razers3.dir/razers.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/razers3 && /usr/bin/c++ -DSEQAN_APP_VERSION=\"3.5.12\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fopenmp -MD -MT apps/razers3/CMakeFiles/razers3.dir/razers.cpp.o -MF CMakeFiles/razers3.dir/razers.cpp.o.d -o CMakeFiles/razers3.dir/razers.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/razers3/razers.cpp [ 2%] Linking CXX executable ../../bin/param_chooser cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/param_chooser && /usr/bin/cmake -E cmake_link_script CMakeFiles/param_chooser.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/param_chooser.dir/link.d CMakeFiles/param_chooser.dir/param_chooser.cpp.o -o ../../bin/param_chooser -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 2%] Built target param_chooser [ 2%] Building CXX object apps/razers3/CMakeFiles/razers3.dir/param_tabs.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/razers3 && /usr/bin/c++ -DSEQAN_APP_VERSION=\"3.5.12\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fopenmp -MD -MT apps/razers3/CMakeFiles/razers3.dir/param_tabs.cpp.o -MF CMakeFiles/razers3.dir/param_tabs.cpp.o.d -o CMakeFiles/razers3.dir/param_tabs.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/razers3/param_tabs.cpp make -f apps/razers3/CMakeFiles/razers3_simulate_reads.dir/build.make apps/razers3/CMakeFiles/razers3_simulate_reads.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/razers3 /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/razers3 /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/razers3/CMakeFiles/razers3_simulate_reads.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/razers3/CMakeFiles/razers3_simulate_reads.dir/build.make apps/razers3/CMakeFiles/razers3_simulate_reads.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 2%] Building CXX object apps/razers3/CMakeFiles/razers3_simulate_reads.dir/simulate_reads.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/razers3 && /usr/bin/c++ -DSEQAN_APP_VERSION=\"3.5.12\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fopenmp -MD -MT apps/razers3/CMakeFiles/razers3_simulate_reads.dir/simulate_reads.cpp.o -MF CMakeFiles/razers3_simulate_reads.dir/simulate_reads.cpp.o.d -o CMakeFiles/razers3_simulate_reads.dir/simulate_reads.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/razers3/simulate_reads.cpp [ 2%] Linking CXX executable ../../bin/rabema_prepare_sam cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/rabema && /usr/bin/cmake -E cmake_link_script CMakeFiles/rabema_prepare_sam.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/rabema_prepare_sam.dir/link.d CMakeFiles/rabema_prepare_sam.dir/prepare_sam.cpp.o -o ../../bin/rabema_prepare_sam -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 2%] Built target rabema_prepare_sam make -f apps/razers3/CMakeFiles/razers3_quality2prob.dir/build.make apps/razers3/CMakeFiles/razers3_quality2prob.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/razers3 /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/razers3 /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/razers3/CMakeFiles/razers3_quality2prob.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/razers3/CMakeFiles/razers3_quality2prob.dir/build.make apps/razers3/CMakeFiles/razers3_quality2prob.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 2%] Building CXX object apps/razers3/CMakeFiles/razers3_quality2prob.dir/quality2prob.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/razers3 && /usr/bin/c++ -DSEQAN_APP_VERSION=\"3.5.12\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fopenmp -MD -MT apps/razers3/CMakeFiles/razers3_quality2prob.dir/quality2prob.cpp.o -MF CMakeFiles/razers3_quality2prob.dir/quality2prob.cpp.o.d -o CMakeFiles/razers3_quality2prob.dir/quality2prob.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/razers3/quality2prob.cpp [ 2%] Linking CXX executable ../../bin/rabema_build_gold_standard cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/rabema && /usr/bin/cmake -E cmake_link_script CMakeFiles/rabema_build_gold_standard.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/rabema_build_gold_standard.dir/link.d CMakeFiles/rabema_build_gold_standard.dir/rabema_build_gold_standard.cpp.o -o ../../bin/rabema_build_gold_standard -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 2%] Built target rabema_build_gold_standard make -f apps/rep_sep/CMakeFiles/rep_sep.dir/build.make apps/rep_sep/CMakeFiles/rep_sep.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/rep_sep /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/rep_sep /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/rep_sep/CMakeFiles/rep_sep.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/rep_sep/CMakeFiles/rep_sep.dir/build.make apps/rep_sep/CMakeFiles/rep_sep.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 3%] Building CXX object apps/rep_sep/CMakeFiles/rep_sep.dir/rep_sep.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/rep_sep && /usr/bin/c++ -DSEQAN_APP_VERSION=\"0.1.15\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fopenmp -MD -MT apps/rep_sep/CMakeFiles/rep_sep.dir/rep_sep.cpp.o -MF CMakeFiles/rep_sep.dir/rep_sep.cpp.o.d -o CMakeFiles/rep_sep.dir/rep_sep.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/rep_sep/rep_sep.cpp [ 4%] Linking CXX executable ../../bin/rabema_evaluate cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/rabema && /usr/bin/cmake -E cmake_link_script CMakeFiles/rabema_evaluate.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/rabema_evaluate.dir/link.d CMakeFiles/rabema_evaluate.dir/rabema_evaluate.cpp.o -o ../../bin/rabema_evaluate -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 4%] Built target rabema_evaluate make -f apps/sak/CMakeFiles/sak.dir/build.make apps/sak/CMakeFiles/sak.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/sak /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/sak /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/sak/CMakeFiles/sak.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/sak/CMakeFiles/sak.dir/build.make apps/sak/CMakeFiles/sak.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 5%] Building CXX object apps/sak/CMakeFiles/sak.dir/sak.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/sak && /usr/bin/c++ -DSEQAN_APP_VERSION=\"0.4.12\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fopenmp -MD -MT apps/sak/CMakeFiles/sak.dir/sak.cpp.o -MF CMakeFiles/sak.dir/sak.cpp.o.d -o CMakeFiles/sak.dir/sak.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/sak/sak.cpp make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 5%] Built target pair_align_global_1101 make -f apps/sam2matrix/CMakeFiles/sam2matrix.dir/build.make apps/sam2matrix/CMakeFiles/sam2matrix.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/sam2matrix /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/sam2matrix /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/sam2matrix/CMakeFiles/sam2matrix.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/sam2matrix/CMakeFiles/sam2matrix.dir/build.make apps/sam2matrix/CMakeFiles/sam2matrix.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 5%] Building CXX object apps/sam2matrix/CMakeFiles/sam2matrix.dir/sam2matrix.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/sam2matrix && /usr/bin/c++ -DSEQAN_APP_VERSION=\"0.3.12\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fopenmp -MD -MT apps/sam2matrix/CMakeFiles/sam2matrix.dir/sam2matrix.cpp.o -MF CMakeFiles/sam2matrix.dir/sam2matrix.cpp.o.d -o CMakeFiles/sam2matrix.dir/sam2matrix.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/sam2matrix/sam2matrix.cpp [ 5%] Linking CXX executable ../../bin/razers3_simulate_reads cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/razers3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/razers3_simulate_reads.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/razers3_simulate_reads.dir/link.d CMakeFiles/razers3_simulate_reads.dir/simulate_reads.cpp.o -o ../../bin/razers3_simulate_reads -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 5%] Built target razers3_simulate_reads make -f apps/samcat/CMakeFiles/samcat.dir/build.make apps/samcat/CMakeFiles/samcat.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/samcat /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/samcat /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/samcat/CMakeFiles/samcat.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/samcat/CMakeFiles/samcat.dir/build.make apps/samcat/CMakeFiles/samcat.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 5%] Building CXX object apps/samcat/CMakeFiles/samcat.dir/samcat.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/samcat && /usr/bin/c++ -DSEQAN_APP_VERSION=\"0.3.12\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fopenmp -MD -MT apps/samcat/CMakeFiles/samcat.dir/samcat.cpp.o -MF CMakeFiles/samcat.dir/samcat.cpp.o.d -o CMakeFiles/samcat.dir/samcat.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/samcat/samcat.cpp make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 5%] Built target pair_align_global_1110 make -f apps/searchjoin/CMakeFiles/s4_search.dir/build.make apps/searchjoin/CMakeFiles/s4_search.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/searchjoin /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/searchjoin /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/searchjoin/CMakeFiles/s4_search.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/searchjoin/CMakeFiles/s4_search.dir/build.make apps/searchjoin/CMakeFiles/s4_search.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 5%] Building CXX object apps/searchjoin/CMakeFiles/s4_search.dir/search.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/searchjoin && /usr/bin/c++ -DSEARCHJOIN_HUGEDB=TRUE -DSEQAN_APP_VERSION=\"0.5.12\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fopenmp -MD -MT apps/searchjoin/CMakeFiles/s4_search.dir/search.cpp.o -MF CMakeFiles/s4_search.dir/search.cpp.o.d -o CMakeFiles/s4_search.dir/search.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/searchjoin/search.cpp [ 5%] Linking CXX executable ../../bin/razers3_quality2prob cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/razers3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/razers3_quality2prob.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/razers3_quality2prob.dir/link.d CMakeFiles/razers3_quality2prob.dir/quality2prob.cpp.o -o ../../bin/razers3_quality2prob -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 5%] Built target razers3_quality2prob make -f apps/searchjoin/CMakeFiles/s4_join.dir/build.make apps/searchjoin/CMakeFiles/s4_join.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/searchjoin /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/searchjoin /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/searchjoin/CMakeFiles/s4_join.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/searchjoin/CMakeFiles/s4_join.dir/build.make apps/searchjoin/CMakeFiles/s4_join.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 5%] Building CXX object apps/searchjoin/CMakeFiles/s4_join.dir/join.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/searchjoin && /usr/bin/c++ -DSEARCHJOIN_HUGEDB=TRUE -DSEQAN_APP_VERSION=\"0.5.12\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fopenmp -MD -MT apps/searchjoin/CMakeFiles/s4_join.dir/join.cpp.o -MF CMakeFiles/s4_join.dir/join.cpp.o.d -o CMakeFiles/s4_join.dir/join.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/searchjoin/join.cpp [ 5%] Linking CXX executable ../../bin/rep_sep cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/rep_sep && /usr/bin/cmake -E cmake_link_script CMakeFiles/rep_sep.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/rep_sep.dir/link.d CMakeFiles/rep_sep.dir/rep_sep.cpp.o -o ../../bin/rep_sep -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 5%] Built target rep_sep make -f apps/seqan_tcoffee/CMakeFiles/seqan_tcoffee.dir/build.make apps/seqan_tcoffee/CMakeFiles/seqan_tcoffee.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/seqan_tcoffee /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/seqan_tcoffee/CMakeFiles/seqan_tcoffee.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/seqan_tcoffee/CMakeFiles/seqan_tcoffee.dir/build.make apps/seqan_tcoffee/CMakeFiles/seqan_tcoffee.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 5%] Building CXX object apps/seqan_tcoffee/CMakeFiles/seqan_tcoffee.dir/seqan_tcoffee.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/seqan_tcoffee && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.13.12\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fopenmp -MD -MT apps/seqan_tcoffee/CMakeFiles/seqan_tcoffee.dir/seqan_tcoffee.cpp.o -MF CMakeFiles/seqan_tcoffee.dir/seqan_tcoffee.cpp.o.d -o CMakeFiles/seqan_tcoffee.dir/seqan_tcoffee.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/seqan_tcoffee.cpp [ 5%] Linking CXX executable ../../bin/sak cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/sak && /usr/bin/cmake -E cmake_link_script CMakeFiles/sak.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/sak.dir/link.d CMakeFiles/sak.dir/sak.cpp.o -o ../../bin/sak -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 5%] Built target sak make -f apps/seqcons2/CMakeFiles/seqcons2.dir/build.make apps/seqcons2/CMakeFiles/seqcons2.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/seqcons2 /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/seqcons2 /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/seqcons2/CMakeFiles/seqcons2.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/seqcons2/CMakeFiles/seqcons2.dir/build.make apps/seqcons2/CMakeFiles/seqcons2.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 5%] Building CXX object apps/seqcons2/CMakeFiles/seqcons2.dir/seqcons.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/seqcons2 && /usr/bin/c++ -DSEQAN_APP_VERSION=\"2.0.13\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fopenmp -MD -MT apps/seqcons2/CMakeFiles/seqcons2.dir/seqcons.cpp.o -MF CMakeFiles/seqcons2.dir/seqcons.cpp.o.d -o CMakeFiles/seqcons2.dir/seqcons.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/seqcons2/seqcons.cpp [ 5%] Linking CXX executable ../../bin/sam2matrix cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/sam2matrix && /usr/bin/cmake -E cmake_link_script CMakeFiles/sam2matrix.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/sam2matrix.dir/link.d CMakeFiles/sam2matrix.dir/sam2matrix.cpp.o -o ../../bin/sam2matrix -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 5%] Built target sam2matrix [ 5%] Building CXX object apps/seqcons2/CMakeFiles/seqcons2.dir/seqcons_app.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/seqcons2 && /usr/bin/c++ -DSEQAN_APP_VERSION=\"2.0.13\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fopenmp -MD -MT apps/seqcons2/CMakeFiles/seqcons2.dir/seqcons_app.cpp.o -MF CMakeFiles/seqcons2.dir/seqcons_app.cpp.o.d -o CMakeFiles/seqcons2.dir/seqcons_app.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/seqcons2/seqcons_app.cpp [ 5%] Linking CXX executable ../../bin/razers cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/razers && /usr/bin/cmake -E cmake_link_script CMakeFiles/razers.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/razers.dir/link.d CMakeFiles/razers.dir/razers.cpp.o CMakeFiles/razers.dir/param_tabs.cpp.o -o ../../bin/razers -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 5%] Built target razers [ 6%] Building CXX object apps/seqcons2/CMakeFiles/seqcons2.dir/seqcons_options.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/seqcons2 && /usr/bin/c++ -DSEQAN_APP_VERSION=\"2.0.13\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fopenmp -MD -MT apps/seqcons2/CMakeFiles/seqcons2.dir/seqcons_options.cpp.o -MF CMakeFiles/seqcons2.dir/seqcons_options.cpp.o.d -o CMakeFiles/seqcons2.dir/seqcons_options.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/seqcons2/seqcons_options.cpp [ 6%] Linking CXX executable ../../bin/samcat cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/samcat && /usr/bin/cmake -E cmake_link_script CMakeFiles/samcat.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/samcat.dir/link.d CMakeFiles/samcat.dir/samcat.cpp.o -o ../../bin/samcat -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 6%] Built target samcat make -f apps/sgip/CMakeFiles/sgip.dir/build.make apps/sgip/CMakeFiles/sgip.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/sgip /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/sgip /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/sgip/CMakeFiles/sgip.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/sgip/CMakeFiles/sgip.dir/build.make apps/sgip/CMakeFiles/sgip.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 6%] Building CXX object apps/sgip/CMakeFiles/sgip.dir/sgip.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/sgip && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.4.12\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fopenmp -MD -MT apps/sgip/CMakeFiles/sgip.dir/sgip.cpp.o -MF CMakeFiles/sgip.dir/sgip.cpp.o.d -o CMakeFiles/sgip.dir/sgip.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/sgip/sgip.cpp make -f apps/snp_store/CMakeFiles/snp_store.dir/build.make apps/snp_store/CMakeFiles/snp_store.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/snp_store /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/snp_store /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/snp_store/CMakeFiles/snp_store.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/snp_store/CMakeFiles/snp_store.dir/build.make apps/snp_store/CMakeFiles/snp_store.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 6%] Building CXX object apps/snp_store/CMakeFiles/snp_store.dir/snp_store.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/snp_store && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.3.12\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fopenmp -MD -MT apps/snp_store/CMakeFiles/snp_store.dir/snp_store.cpp.o -MF CMakeFiles/snp_store.dir/snp_store.cpp.o.d -o CMakeFiles/snp_store.dir/snp_store.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/snp_store/snp_store.cpp make -f apps/splazers/CMakeFiles/splazers.dir/build.make apps/splazers/CMakeFiles/splazers.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/splazers /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/splazers /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/splazers/CMakeFiles/splazers.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/splazers/CMakeFiles/splazers.dir/build.make apps/splazers/CMakeFiles/splazers.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 6%] Building CXX object apps/splazers/CMakeFiles/splazers.dir/splazers.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/splazers && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.3.12\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fopenmp -MD -MT apps/splazers/CMakeFiles/splazers.dir/splazers.cpp.o -MF CMakeFiles/splazers.dir/splazers.cpp.o.d -o CMakeFiles/splazers.dir/splazers.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/splazers/splazers.cpp [ 6%] Linking CXX executable ../../bin/sgip cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/sgip && /usr/bin/cmake -E cmake_link_script CMakeFiles/sgip.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/sgip.dir/link.d CMakeFiles/sgip.dir/sgip.cpp.o -o ../../bin/sgip -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 6%] Built target sgip make -f apps/stellar/CMakeFiles/stellar.dir/build.make apps/stellar/CMakeFiles/stellar.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/stellar /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/stellar /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/stellar/CMakeFiles/stellar.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/stellar/CMakeFiles/stellar.dir/build.make apps/stellar/CMakeFiles/stellar.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 6%] Building CXX object apps/stellar/CMakeFiles/stellar.dir/stellar.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/stellar && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.4.15\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fopenmp -MD -MT apps/stellar/CMakeFiles/stellar.dir/stellar.cpp.o -MF CMakeFiles/stellar.dir/stellar.cpp.o.d -o CMakeFiles/stellar.dir/stellar.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/stellar/stellar.cpp [ 6%] Linking CXX executable ../../bin/seqcons2 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/seqcons2 && /usr/bin/cmake -E cmake_link_script CMakeFiles/seqcons2.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/seqcons2.dir/link.d CMakeFiles/seqcons2.dir/seqcons.cpp.o CMakeFiles/seqcons2.dir/seqcons_app.cpp.o CMakeFiles/seqcons2.dir/seqcons_options.cpp.o -o ../../bin/seqcons2 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 6%] Built target seqcons2 make -f apps/tree_recon/CMakeFiles/tree_recon.dir/build.make apps/tree_recon/CMakeFiles/tree_recon.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/tree_recon /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/tree_recon /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/tree_recon/CMakeFiles/tree_recon.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/tree_recon/CMakeFiles/tree_recon.dir/build.make apps/tree_recon/CMakeFiles/tree_recon.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 6%] Building CXX object apps/tree_recon/CMakeFiles/tree_recon.dir/tree_recon.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/tree_recon && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.4.12\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fopenmp -MD -MT apps/tree_recon/CMakeFiles/tree_recon.dir/tree_recon.cpp.o -MF CMakeFiles/tree_recon.dir/tree_recon.cpp.o.d -o CMakeFiles/tree_recon.dir/tree_recon.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/tree_recon/tree_recon.cpp [ 6%] Linking CXX executable ../../bin/snp_store cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/snp_store && /usr/bin/cmake -E cmake_link_script CMakeFiles/snp_store.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/snp_store.dir/link.d CMakeFiles/snp_store.dir/snp_store.cpp.o -o ../../bin/snp_store -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 6%] Built target snp_store make -f apps/yara/CMakeFiles/yara_indexer.dir/build.make apps/yara/CMakeFiles/yara_indexer.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/yara /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/yara /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/yara/CMakeFiles/yara_indexer.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/yara/CMakeFiles/yara_indexer.dir/build.make apps/yara/CMakeFiles/yara_indexer.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 6%] Building CXX object apps/yara/CMakeFiles/yara_indexer.dir/indexer.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/yara && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.0.6\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -DYARA_LARGE_CONTIGS=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fopenmp -MD -MT apps/yara/CMakeFiles/yara_indexer.dir/indexer.cpp.o -MF CMakeFiles/yara_indexer.dir/indexer.cpp.o.d -o CMakeFiles/yara_indexer.dir/indexer.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/yara/indexer.cpp [ 6%] Linking CXX executable ../../bin/s4_search cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/searchjoin && /usr/bin/cmake -E cmake_link_script CMakeFiles/s4_search.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/s4_search.dir/link.d CMakeFiles/s4_search.dir/search.cpp.o -o ../../bin/s4_search -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 6%] Built target s4_search make -f apps/yara/CMakeFiles/yara_mapper.dir/build.make apps/yara/CMakeFiles/yara_mapper.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/yara /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/yara /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/yara/CMakeFiles/yara_mapper.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/yara/CMakeFiles/yara_mapper.dir/build.make apps/yara/CMakeFiles/yara_mapper.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 6%] Building CXX object apps/yara/CMakeFiles/yara_mapper.dir/mapper.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/yara && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.0.6\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -DYARA_LARGE_CONTIGS=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fopenmp -MD -MT apps/yara/CMakeFiles/yara_mapper.dir/mapper.cpp.o -MF CMakeFiles/yara_mapper.dir/mapper.cpp.o.d -o CMakeFiles/yara_mapper.dir/mapper.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/yara/mapper.cpp [ 6%] Linking CXX executable ../../bin/s4_join cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/searchjoin && /usr/bin/cmake -E cmake_link_script CMakeFiles/s4_join.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/s4_join.dir/link.d CMakeFiles/s4_join.dir/join.cpp.o -o ../../bin/s4_join -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 6%] Built target s4_join make -f tests/align/CMakeFiles/test_align.dir/build.make tests/align/CMakeFiles/test_align.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/align /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/align /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/align/CMakeFiles/test_align.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/align/CMakeFiles/test_align.dir/build.make tests/align/CMakeFiles/test_align.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 6%] Building CXX object tests/align/CMakeFiles/test_align.dir/test_align.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/align && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/align/CMakeFiles/test_align.dir/test_align.cpp.o -MF CMakeFiles/test_align.dir/test_align.cpp.o.d -o CMakeFiles/test_align.dir/test_align.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/align/test_align.cpp [ 6%] Linking CXX executable ../../bin/tree_recon cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/tree_recon && /usr/bin/cmake -E cmake_link_script CMakeFiles/tree_recon.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/tree_recon.dir/link.d CMakeFiles/tree_recon.dir/tree_recon.cpp.o -o ../../bin/tree_recon -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 6%] Built target tree_recon make -f tests/align_extend/CMakeFiles/test_align_extend.dir/build.make tests/align_extend/CMakeFiles/test_align_extend.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/align_extend /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/align_extend /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/align_extend/CMakeFiles/test_align_extend.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/align_extend/CMakeFiles/test_align_extend.dir/build.make tests/align_extend/CMakeFiles/test_align_extend.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 6%] Building CXX object tests/align_extend/CMakeFiles/test_align_extend.dir/test_align_extend.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/align_extend && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/align_extend/CMakeFiles/test_align_extend.dir/test_align_extend.cpp.o -MF CMakeFiles/test_align_extend.dir/test_align_extend.cpp.o.d -o CMakeFiles/test_align_extend.dir/test_align_extend.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/align_extend/test_align_extend.cpp [ 6%] Linking CXX executable ../../bin/seqan_tcoffee cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/seqan_tcoffee && /usr/bin/cmake -E cmake_link_script CMakeFiles/seqan_tcoffee.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/seqan_tcoffee.dir/link.d CMakeFiles/seqan_tcoffee.dir/seqan_tcoffee.cpp.o -o ../../bin/seqan_tcoffee -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 6%] Built target seqan_tcoffee make -f tests/align_parallel/CMakeFiles/test_align_parallel_data_structures.dir/build.make tests/align_parallel/CMakeFiles/test_align_parallel_data_structures.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/align_parallel /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/align_parallel /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/align_parallel/CMakeFiles/test_align_parallel_data_structures.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/align_parallel/CMakeFiles/test_align_parallel_data_structures.dir/build.make tests/align_parallel/CMakeFiles/test_align_parallel_data_structures.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 6%] Building CXX object tests/align_parallel/CMakeFiles/test_align_parallel_data_structures.dir/test_align_parallel_data_structures.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/align_parallel && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/align_parallel/CMakeFiles/test_align_parallel_data_structures.dir/test_align_parallel_data_structures.cpp.o -MF CMakeFiles/test_align_parallel_data_structures.dir/test_align_parallel_data_structures.cpp.o.d -o CMakeFiles/test_align_parallel_data_structures.dir/test_align_parallel_data_structures.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/align_parallel/test_align_parallel_data_structures.cpp [ 6%] Linking CXX executable ../../bin/test_align_parallel_data_structures cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/align_parallel && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_align_parallel_data_structures.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_align_parallel_data_structures.dir/link.d CMakeFiles/test_align_parallel_data_structures.dir/test_align_parallel_data_structures.cpp.o -o ../../bin/test_align_parallel_data_structures -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 6%] Built target test_align_parallel_data_structures make -f tests/align_parallel/CMakeFiles/test_align_parallel_algorithm.dir/build.make tests/align_parallel/CMakeFiles/test_align_parallel_algorithm.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/align_parallel /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/align_parallel /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/align_parallel/CMakeFiles/test_align_parallel_algorithm.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/align_parallel/CMakeFiles/test_align_parallel_algorithm.dir/build.make tests/align_parallel/CMakeFiles/test_align_parallel_algorithm.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 6%] Building CXX object tests/align_parallel/CMakeFiles/test_align_parallel_algorithm.dir/test_align_parallel_algorithm.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/align_parallel && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/align_parallel/CMakeFiles/test_align_parallel_algorithm.dir/test_align_parallel_algorithm.cpp.o -MF CMakeFiles/test_align_parallel_algorithm.dir/test_align_parallel_algorithm.cpp.o.d -o CMakeFiles/test_align_parallel_algorithm.dir/test_align_parallel_algorithm.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/align_parallel/test_align_parallel_algorithm.cpp [ 6%] Linking CXX executable ../../bin/splazers cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/splazers && /usr/bin/cmake -E cmake_link_script CMakeFiles/splazers.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/splazers.dir/link.d CMakeFiles/splazers.dir/splazers.cpp.o -o ../../bin/splazers -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 6%] Built target splazers make -f tests/align_parallel/CMakeFiles/test_align_parallel_interface.dir/build.make tests/align_parallel/CMakeFiles/test_align_parallel_interface.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/align_parallel /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/align_parallel /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/align_parallel/CMakeFiles/test_align_parallel_interface.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/align_parallel/CMakeFiles/test_align_parallel_interface.dir/build.make tests/align_parallel/CMakeFiles/test_align_parallel_interface.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 6%] Building CXX object tests/align_parallel/CMakeFiles/test_align_parallel_interface.dir/test_align_parallel_interface.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/align_parallel && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/align_parallel/CMakeFiles/test_align_parallel_interface.dir/test_align_parallel_interface.cpp.o -MF CMakeFiles/test_align_parallel_interface.dir/test_align_parallel_interface.cpp.o.d -o CMakeFiles/test_align_parallel_interface.dir/test_align_parallel_interface.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/align_parallel/test_align_parallel_interface.cpp [ 7%] Linking CXX executable ../../bin/test_align_extend cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/align_extend && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_align_extend.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_align_extend.dir/link.d CMakeFiles/test_align_extend.dir/test_align_extend.cpp.o -o ../../bin/test_align_extend -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 7%] Built target test_align_extend make -f tests/align_profile/CMakeFiles/test_align_profile.dir/build.make tests/align_profile/CMakeFiles/test_align_profile.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/align_profile /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/align_profile /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/align_profile/CMakeFiles/test_align_profile.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/align_profile/CMakeFiles/test_align_profile.dir/build.make tests/align_profile/CMakeFiles/test_align_profile.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 7%] Building CXX object tests/align_profile/CMakeFiles/test_align_profile.dir/test_align_profile.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/align_profile && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/align_profile/CMakeFiles/test_align_profile.dir/test_align_profile.cpp.o -MF CMakeFiles/test_align_profile.dir/test_align_profile.cpp.o.d -o CMakeFiles/test_align_profile.dir/test_align_profile.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/align_profile/test_align_profile.cpp [ 7%] Linking CXX executable ../../bin/test_align_parallel_algorithm cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/align_parallel && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_align_parallel_algorithm.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_align_parallel_algorithm.dir/link.d CMakeFiles/test_align_parallel_algorithm.dir/test_align_parallel_algorithm.cpp.o -o ../../bin/test_align_parallel_algorithm -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 7%] Built target test_align_parallel_algorithm make -f tests/align_split/CMakeFiles/test_align_split.dir/build.make tests/align_split/CMakeFiles/test_align_split.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/align_split /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/align_split /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/align_split/CMakeFiles/test_align_split.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/align_split/CMakeFiles/test_align_split.dir/build.make tests/align_split/CMakeFiles/test_align_split.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 7%] Building CXX object tests/align_split/CMakeFiles/test_align_split.dir/test_align_split.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/align_split && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/align_split/CMakeFiles/test_align_split.dir/test_align_split.cpp.o -MF CMakeFiles/test_align_split.dir/test_align_split.cpp.o.d -o CMakeFiles/test_align_split.dir/test_align_split.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/align_split/test_align_split.cpp [ 7%] Linking CXX executable ../../bin/test_align_profile cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/align_profile && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_align_profile.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_align_profile.dir/link.d CMakeFiles/test_align_profile.dir/test_align_profile.cpp.o -o ../../bin/test_align_profile -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 7%] Built target test_align_profile make -f tests/alignment_free/CMakeFiles/test_alignment_free.dir/build.make tests/alignment_free/CMakeFiles/test_alignment_free.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/alignment_free /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/alignment_free /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/alignment_free/CMakeFiles/test_alignment_free.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/alignment_free/CMakeFiles/test_alignment_free.dir/build.make tests/alignment_free/CMakeFiles/test_alignment_free.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 7%] Building CXX object tests/alignment_free/CMakeFiles/test_alignment_free.dir/test_alignment_free.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/alignment_free && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/alignment_free/CMakeFiles/test_alignment_free.dir/test_alignment_free.cpp.o -MF CMakeFiles/test_alignment_free.dir/test_alignment_free.cpp.o.d -o CMakeFiles/test_alignment_free.dir/test_alignment_free.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/alignment_free/test_alignment_free.cpp [ 7%] Linking CXX executable ../../bin/stellar cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/stellar && /usr/bin/cmake -E cmake_link_script CMakeFiles/stellar.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/stellar.dir/link.d CMakeFiles/stellar.dir/stellar.cpp.o -o ../../bin/stellar -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 7%] Built target stellar make -f tests/arg_parse/CMakeFiles/test_arg_parse.dir/build.make tests/arg_parse/CMakeFiles/test_arg_parse.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/arg_parse /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/arg_parse /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/arg_parse/CMakeFiles/test_arg_parse.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/arg_parse/CMakeFiles/test_arg_parse.dir/build.make tests/arg_parse/CMakeFiles/test_arg_parse.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 7%] Building CXX object tests/arg_parse/CMakeFiles/test_arg_parse.dir/test_arg_parse.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/arg_parse && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/arg_parse/CMakeFiles/test_arg_parse.dir/test_arg_parse.cpp.o -MF CMakeFiles/test_arg_parse.dir/test_arg_parse.cpp.o.d -o CMakeFiles/test_arg_parse.dir/test_arg_parse.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/arg_parse/test_arg_parse.cpp [ 7%] Linking CXX executable ../../bin/test_align_parallel_interface cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/align_parallel && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_align_parallel_interface.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_align_parallel_interface.dir/link.d CMakeFiles/test_align_parallel_interface.dir/test_align_parallel_interface.cpp.o -o ../../bin/test_align_parallel_interface -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 7%] Built target test_align_parallel_interface make -f tests/arg_parse/CMakeFiles/test_arg_parse_version_check.dir/build.make tests/arg_parse/CMakeFiles/test_arg_parse_version_check.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/arg_parse /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/arg_parse /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/arg_parse/CMakeFiles/test_arg_parse_version_check.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/arg_parse/CMakeFiles/test_arg_parse_version_check.dir/build.make tests/arg_parse/CMakeFiles/test_arg_parse_version_check.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 7%] Building CXX object tests/arg_parse/CMakeFiles/test_arg_parse_version_check.dir/test_arg_parse_version_check.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/arg_parse && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/arg_parse/CMakeFiles/test_arg_parse_version_check.dir/test_arg_parse_version_check.cpp.o -MF CMakeFiles/test_arg_parse_version_check.dir/test_arg_parse_version_check.cpp.o.d -o CMakeFiles/test_arg_parse_version_check.dir/test_arg_parse_version_check.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/arg_parse/test_arg_parse_version_check.cpp [ 8%] Linking CXX executable ../../bin/test_alignment_free cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/alignment_free && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_alignment_free.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_alignment_free.dir/link.d CMakeFiles/test_alignment_free.dir/test_alignment_free.cpp.o -o ../../bin/test_alignment_free -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 8%] Built target test_alignment_free make -f tests/bam_io/CMakeFiles/test_bam_io.dir/build.make tests/bam_io/CMakeFiles/test_bam_io.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/bam_io /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/bam_io /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/bam_io/CMakeFiles/test_bam_io.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/bam_io/CMakeFiles/test_bam_io.dir/build.make tests/bam_io/CMakeFiles/test_bam_io.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 8%] Building CXX object tests/bam_io/CMakeFiles/test_bam_io.dir/test_bam_io.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/bam_io && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/bam_io/CMakeFiles/test_bam_io.dir/test_bam_io.cpp.o -MF CMakeFiles/test_bam_io.dir/test_bam_io.cpp.o.d -o CMakeFiles/test_bam_io.dir/test_bam_io.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/bam_io/test_bam_io.cpp [ 8%] Linking CXX executable ../../bin/test_align_split cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/align_split && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_align_split.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_align_split.dir/link.d CMakeFiles/test_align_split.dir/test_align_split.cpp.o -o ../../bin/test_align_split -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 8%] Built target test_align_split make -f tests/basic/CMakeFiles/test_basic_exception.dir/build.make tests/basic/CMakeFiles/test_basic_exception.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/basic /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic/CMakeFiles/test_basic_exception.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/basic/CMakeFiles/test_basic_exception.dir/build.make tests/basic/CMakeFiles/test_basic_exception.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 8%] Building CXX object tests/basic/CMakeFiles/test_basic_exception.dir/test_basic_exception.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/basic/CMakeFiles/test_basic_exception.dir/test_basic_exception.cpp.o -MF CMakeFiles/test_basic_exception.dir/test_basic_exception.cpp.o.d -o CMakeFiles/test_basic_exception.dir/test_basic_exception.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/basic/test_basic_exception.cpp [ 8%] Linking CXX executable ../../bin/test_basic_exception cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_basic_exception.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_basic_exception.dir/link.d CMakeFiles/test_basic_exception.dir/test_basic_exception.cpp.o -o ../../bin/test_basic_exception -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 8%] Built target test_basic_exception make -f tests/basic/CMakeFiles/test_basic_metaprogramming.dir/build.make tests/basic/CMakeFiles/test_basic_metaprogramming.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/basic /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic/CMakeFiles/test_basic_metaprogramming.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/basic/CMakeFiles/test_basic_metaprogramming.dir/build.make tests/basic/CMakeFiles/test_basic_metaprogramming.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 9%] Building CXX object tests/basic/CMakeFiles/test_basic_metaprogramming.dir/test_basic_metaprogramming.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/basic/CMakeFiles/test_basic_metaprogramming.dir/test_basic_metaprogramming.cpp.o -MF CMakeFiles/test_basic_metaprogramming.dir/test_basic_metaprogramming.cpp.o.d -o CMakeFiles/test_basic_metaprogramming.dir/test_basic_metaprogramming.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/basic/test_basic_metaprogramming.cpp [ 9%] Linking CXX executable ../../bin/test_basic_metaprogramming cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_basic_metaprogramming.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_basic_metaprogramming.dir/link.d CMakeFiles/test_basic_metaprogramming.dir/test_basic_metaprogramming.cpp.o -o ../../bin/test_basic_metaprogramming -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 9%] Built target test_basic_metaprogramming make -f tests/basic/CMakeFiles/test_basic_fundamental.dir/build.make tests/basic/CMakeFiles/test_basic_fundamental.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/basic /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic/CMakeFiles/test_basic_fundamental.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/basic/CMakeFiles/test_basic_fundamental.dir/build.make tests/basic/CMakeFiles/test_basic_fundamental.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 9%] Building CXX object tests/basic/CMakeFiles/test_basic_fundamental.dir/test_basic_fundamental.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/basic/CMakeFiles/test_basic_fundamental.dir/test_basic_fundamental.cpp.o -MF CMakeFiles/test_basic_fundamental.dir/test_basic_fundamental.cpp.o.d -o CMakeFiles/test_basic_fundamental.dir/test_basic_fundamental.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/basic/test_basic_fundamental.cpp [ 9%] Linking CXX executable ../../bin/test_basic_fundamental cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_basic_fundamental.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_basic_fundamental.dir/link.d CMakeFiles/test_basic_fundamental.dir/test_basic_fundamental.cpp.o -o ../../bin/test_basic_fundamental -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 9%] Built target test_basic_fundamental make -f tests/basic/CMakeFiles/test_basic_concept.dir/build.make tests/basic/CMakeFiles/test_basic_concept.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/basic /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic/CMakeFiles/test_basic_concept.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/basic/CMakeFiles/test_basic_concept.dir/build.make tests/basic/CMakeFiles/test_basic_concept.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 9%] Building CXX object tests/basic/CMakeFiles/test_basic_concept.dir/test_basic_concept.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/basic/CMakeFiles/test_basic_concept.dir/test_basic_concept.cpp.o -MF CMakeFiles/test_basic_concept.dir/test_basic_concept.cpp.o.d -o CMakeFiles/test_basic_concept.dir/test_basic_concept.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/basic/test_basic_concept.cpp [ 9%] Linking CXX executable ../../bin/test_basic_concept cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_basic_concept.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_basic_concept.dir/link.d CMakeFiles/test_basic_concept.dir/test_basic_concept.cpp.o -o ../../bin/test_basic_concept -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 9%] Built target test_basic_concept make -f tests/basic/CMakeFiles/test_basic_alphabet.dir/build.make tests/basic/CMakeFiles/test_basic_alphabet.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/basic /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic/CMakeFiles/test_basic_alphabet.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/basic/CMakeFiles/test_basic_alphabet.dir/build.make tests/basic/CMakeFiles/test_basic_alphabet.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 9%] Building CXX object tests/basic/CMakeFiles/test_basic_alphabet.dir/test_basic_alphabet.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/basic/CMakeFiles/test_basic_alphabet.dir/test_basic_alphabet.cpp.o -MF CMakeFiles/test_basic_alphabet.dir/test_basic_alphabet.cpp.o.d -o CMakeFiles/test_basic_alphabet.dir/test_basic_alphabet.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/basic/test_basic_alphabet.cpp [ 10%] Linking CXX executable ../../bin/test_basic_alphabet cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_basic_alphabet.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_basic_alphabet.dir/link.d CMakeFiles/test_basic_alphabet.dir/test_basic_alphabet.cpp.o -o ../../bin/test_basic_alphabet -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 10%] Built target test_basic_alphabet make -f tests/basic/CMakeFiles/test_basic_aggregate.dir/build.make tests/basic/CMakeFiles/test_basic_aggregate.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/basic /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic/CMakeFiles/test_basic_aggregate.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/basic/CMakeFiles/test_basic_aggregate.dir/build.make tests/basic/CMakeFiles/test_basic_aggregate.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 10%] Building CXX object tests/basic/CMakeFiles/test_basic_aggregate.dir/test_basic_aggregate.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/basic/CMakeFiles/test_basic_aggregate.dir/test_basic_aggregate.cpp.o -MF CMakeFiles/test_basic_aggregate.dir/test_basic_aggregate.cpp.o.d -o CMakeFiles/test_basic_aggregate.dir/test_basic_aggregate.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/basic/test_basic_aggregate.cpp [ 10%] Linking CXX executable ../../bin/test_arg_parse cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/arg_parse && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_arg_parse.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. [ 10%] Linking CXX executable ../../bin/test_arg_parse_version_check cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/arg_parse && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_arg_parse_version_check.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_arg_parse.dir/link.d CMakeFiles/test_arg_parse.dir/test_arg_parse.cpp.o -o ../../bin/test_arg_parse -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 10%] Built target test_arg_parse make -f tests/basic/CMakeFiles/test_basic_allocator.dir/build.make tests/basic/CMakeFiles/test_basic_allocator.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/basic /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic/CMakeFiles/test_basic_allocator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/basic/CMakeFiles/test_basic_allocator.dir/build.make tests/basic/CMakeFiles/test_basic_allocator.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. [ 10%] Building CXX object tests/basic/CMakeFiles/test_basic_allocator.dir/test_basic_allocator.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/basic/CMakeFiles/test_basic_allocator.dir/test_basic_allocator.cpp.o -MF CMakeFiles/test_basic_allocator.dir/test_basic_allocator.cpp.o.d -o CMakeFiles/test_basic_allocator.dir/test_basic_allocator.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/basic/test_basic_allocator.cpp /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_arg_parse_version_check.dir/link.d CMakeFiles/test_arg_parse_version_check.dir/test_arg_parse_version_check.cpp.o -o ../../bin/test_arg_parse_version_check -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 10%] Built target test_arg_parse_version_check make -f tests/basic/CMakeFiles/test_basic_parallelism.dir/build.make tests/basic/CMakeFiles/test_basic_parallelism.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/basic /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic/CMakeFiles/test_basic_parallelism.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/basic/CMakeFiles/test_basic_parallelism.dir/build.make tests/basic/CMakeFiles/test_basic_parallelism.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 10%] Building CXX object tests/basic/CMakeFiles/test_basic_parallelism.dir/test_basic_parallelism.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/basic/CMakeFiles/test_basic_parallelism.dir/test_basic_parallelism.cpp.o -MF CMakeFiles/test_basic_parallelism.dir/test_basic_parallelism.cpp.o.d -o CMakeFiles/test_basic_parallelism.dir/test_basic_parallelism.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/basic/test_basic_parallelism.cpp [ 10%] Linking CXX executable ../../bin/test_basic_parallelism cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_basic_parallelism.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_basic_parallelism.dir/link.d CMakeFiles/test_basic_parallelism.dir/test_basic_parallelism.cpp.o -o ../../bin/test_basic_parallelism -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 10%] Built target test_basic_parallelism make -f tests/basic/CMakeFiles/test_basic_math.dir/build.make tests/basic/CMakeFiles/test_basic_math.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/basic /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic/CMakeFiles/test_basic_math.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/basic/CMakeFiles/test_basic_math.dir/build.make tests/basic/CMakeFiles/test_basic_math.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 10%] Building CXX object tests/basic/CMakeFiles/test_basic_math.dir/test_basic_math.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/basic/CMakeFiles/test_basic_math.dir/test_basic_math.cpp.o -MF CMakeFiles/test_basic_math.dir/test_basic_math.cpp.o.d -o CMakeFiles/test_basic_math.dir/test_basic_math.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/basic/test_basic_math.cpp [ 10%] Linking CXX executable ../../bin/test_basic_aggregate cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_basic_aggregate.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_basic_aggregate.dir/link.d CMakeFiles/test_basic_aggregate.dir/test_basic_aggregate.cpp.o -o ../../bin/test_basic_aggregate -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 10%] Built target test_basic_aggregate make -f tests/basic/CMakeFiles/test_basic_smart_pointer.dir/build.make tests/basic/CMakeFiles/test_basic_smart_pointer.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/basic /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic/CMakeFiles/test_basic_smart_pointer.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/basic/CMakeFiles/test_basic_smart_pointer.dir/build.make tests/basic/CMakeFiles/test_basic_smart_pointer.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 10%] Building CXX object tests/basic/CMakeFiles/test_basic_smart_pointer.dir/test_basic_smart_pointer.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/basic/CMakeFiles/test_basic_smart_pointer.dir/test_basic_smart_pointer.cpp.o -MF CMakeFiles/test_basic_smart_pointer.dir/test_basic_smart_pointer.cpp.o.d -o CMakeFiles/test_basic_smart_pointer.dir/test_basic_smart_pointer.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/basic/test_basic_smart_pointer.cpp [ 10%] Linking CXX executable ../../bin/test_basic_math cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_basic_math.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_basic_math.dir/link.d CMakeFiles/test_basic_math.dir/test_basic_math.cpp.o -o ../../bin/test_basic_math -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 10%] Built target test_basic_math make -f tests/basic/CMakeFiles/test_basic_container.dir/build.make tests/basic/CMakeFiles/test_basic_container.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/basic /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic/CMakeFiles/test_basic_container.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/basic/CMakeFiles/test_basic_container.dir/build.make tests/basic/CMakeFiles/test_basic_container.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 10%] Building CXX object tests/basic/CMakeFiles/test_basic_container.dir/test_basic_container.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/basic/CMakeFiles/test_basic_container.dir/test_basic_container.cpp.o -MF CMakeFiles/test_basic_container.dir/test_basic_container.cpp.o.d -o CMakeFiles/test_basic_container.dir/test_basic_container.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/basic/test_basic_container.cpp [ 10%] Linking CXX executable ../../bin/test_basic_allocator cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_basic_allocator.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_basic_allocator.dir/link.d CMakeFiles/test_basic_allocator.dir/test_basic_allocator.cpp.o -o ../../bin/test_basic_allocator -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 10%] Built target test_basic_allocator make -f tests/basic/CMakeFiles/test_basic_proxy.dir/build.make tests/basic/CMakeFiles/test_basic_proxy.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/basic /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic/CMakeFiles/test_basic_proxy.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/basic/CMakeFiles/test_basic_proxy.dir/build.make tests/basic/CMakeFiles/test_basic_proxy.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 10%] Building CXX object tests/basic/CMakeFiles/test_basic_proxy.dir/test_basic_proxy.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/basic/CMakeFiles/test_basic_proxy.dir/test_basic_proxy.cpp.o -MF CMakeFiles/test_basic_proxy.dir/test_basic_proxy.cpp.o.d -o CMakeFiles/test_basic_proxy.dir/test_basic_proxy.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/basic/test_basic_proxy.cpp [ 10%] Linking CXX executable ../../bin/test_basic_container cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_basic_container.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_basic_container.dir/link.d CMakeFiles/test_basic_container.dir/test_basic_container.cpp.o -o ../../bin/test_basic_container -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 10%] Built target test_basic_container make -f tests/basic/CMakeFiles/test_basic_iterator.dir/build.make tests/basic/CMakeFiles/test_basic_iterator.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/basic /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic/CMakeFiles/test_basic_iterator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/basic/CMakeFiles/test_basic_iterator.dir/build.make tests/basic/CMakeFiles/test_basic_iterator.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 10%] Building CXX object tests/basic/CMakeFiles/test_basic_iterator.dir/test_basic_iterator.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/basic/CMakeFiles/test_basic_iterator.dir/test_basic_iterator.cpp.o -MF CMakeFiles/test_basic_iterator.dir/test_basic_iterator.cpp.o.d -o CMakeFiles/test_basic_iterator.dir/test_basic_iterator.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/basic/test_basic_iterator.cpp [ 10%] Linking CXX executable ../../bin/test_basic_smart_pointer cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_basic_smart_pointer.dir/link.txt --verbose=1 [ 10%] Linking CXX executable ../../bin/test_basic_proxy cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_basic_proxy.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_basic_smart_pointer.dir/link.d CMakeFiles/test_basic_smart_pointer.dir/test_basic_smart_pointer.cpp.o -o ../../bin/test_basic_smart_pointer -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. [ 10%] Built target test_basic_smart_pointer make -f tests/bed_io/CMakeFiles/test_bed_io.dir/build.make tests/bed_io/CMakeFiles/test_bed_io.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/bed_io /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/bed_io /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/bed_io/CMakeFiles/test_bed_io.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/bed_io/CMakeFiles/test_bed_io.dir/build.make tests/bed_io/CMakeFiles/test_bed_io.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 10%] Building CXX object tests/bed_io/CMakeFiles/test_bed_io.dir/test_bed_io.cpp.o /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_basic_proxy.dir/link.d CMakeFiles/test_basic_proxy.dir/test_basic_proxy.cpp.o -o ../../bin/test_basic_proxy -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/bed_io && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/bed_io/CMakeFiles/test_bed_io.dir/test_bed_io.cpp.o -MF CMakeFiles/test_bed_io.dir/test_bed_io.cpp.o.d -o CMakeFiles/test_bed_io.dir/test_bed_io.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/bed_io/test_bed_io.cpp [ 10%] Built target test_basic_proxy make -f tests/blast/CMakeFiles/test_blast.dir/build.make tests/blast/CMakeFiles/test_blast.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/blast /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/blast /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/blast/CMakeFiles/test_blast.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/blast/CMakeFiles/test_blast.dir/build.make tests/blast/CMakeFiles/test_blast.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 11%] Building CXX object tests/blast/CMakeFiles/test_blast.dir/test_blast.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/blast && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/blast/CMakeFiles/test_blast.dir/test_blast.cpp.o -MF CMakeFiles/test_blast.dir/test_blast.cpp.o.d -o CMakeFiles/test_blast.dir/test_blast.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/blast/test_blast.cpp [ 11%] Linking CXX executable ../../bin/test_basic_iterator cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_basic_iterator.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_basic_iterator.dir/link.d CMakeFiles/test_basic_iterator.dir/test_basic_iterator.cpp.o -o ../../bin/test_basic_iterator -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 11%] Built target test_basic_iterator make -f tests/consensus/CMakeFiles/test_consensus.dir/build.make tests/consensus/CMakeFiles/test_consensus.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/consensus /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/consensus /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/consensus/CMakeFiles/test_consensus.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/consensus/CMakeFiles/test_consensus.dir/build.make tests/consensus/CMakeFiles/test_consensus.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 11%] Building CXX object tests/consensus/CMakeFiles/test_consensus.dir/test_consensus.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/consensus && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/consensus/CMakeFiles/test_consensus.dir/test_consensus.cpp.o -MF CMakeFiles/test_consensus.dir/test_consensus.cpp.o.d -o CMakeFiles/test_consensus.dir/test_consensus.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/consensus/test_consensus.cpp [ 11%] Linking CXX executable ../../bin/test_bam_io cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/bam_io && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_bam_io.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_bam_io.dir/link.d CMakeFiles/test_bam_io.dir/test_bam_io.cpp.o -o ../../bin/test_bam_io -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 11%] Built target test_bam_io make -f tests/consensus_v2/CMakeFiles/test_consensus_v2.dir/build.make tests/consensus_v2/CMakeFiles/test_consensus_v2.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/consensus_v2 /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/consensus_v2 /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/consensus_v2/CMakeFiles/test_consensus_v2.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/consensus_v2/CMakeFiles/test_consensus_v2.dir/build.make tests/consensus_v2/CMakeFiles/test_consensus_v2.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 11%] Building CXX object tests/consensus_v2/CMakeFiles/test_consensus_v2.dir/test_consensus_v2.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/consensus_v2 && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/consensus_v2/CMakeFiles/test_consensus_v2.dir/test_consensus_v2.cpp.o -MF CMakeFiles/test_consensus_v2.dir/test_consensus_v2.cpp.o.d -o CMakeFiles/test_consensus_v2.dir/test_consensus_v2.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/consensus_v2/test_consensus_v2.cpp [ 11%] Linking CXX executable ../../bin/test_bed_io cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/bed_io && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_bed_io.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_bed_io.dir/link.d CMakeFiles/test_bed_io.dir/test_bed_io.cpp.o -o ../../bin/test_bed_io -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 11%] Built target test_bed_io make -f tests/find/CMakeFiles/test_find.dir/build.make tests/find/CMakeFiles/test_find.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/find /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/find /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/find/CMakeFiles/test_find.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/find/CMakeFiles/test_find.dir/build.make tests/find/CMakeFiles/test_find.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 11%] Building CXX object tests/find/CMakeFiles/test_find.dir/test_find.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/find && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/find/CMakeFiles/test_find.dir/test_find.cpp.o -MF CMakeFiles/test_find.dir/test_find.cpp.o.d -o CMakeFiles/test_find.dir/test_find.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/find/test_find.cpp [ 11%] Linking CXX executable ../../bin/yara_indexer cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/yara && /usr/bin/cmake -E cmake_link_script CMakeFiles/yara_indexer.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/yara_indexer.dir/link.d CMakeFiles/yara_indexer.dir/indexer.cpp.o -o ../../bin/yara_indexer -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 11%] Built target yara_indexer make -f tests/gff_io/CMakeFiles/test_gff_io.dir/build.make tests/gff_io/CMakeFiles/test_gff_io.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/gff_io /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/gff_io /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/gff_io/CMakeFiles/test_gff_io.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/gff_io/CMakeFiles/test_gff_io.dir/build.make tests/gff_io/CMakeFiles/test_gff_io.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 11%] Building CXX object tests/gff_io/CMakeFiles/test_gff_io.dir/test_gff_io.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/gff_io && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/gff_io/CMakeFiles/test_gff_io.dir/test_gff_io.cpp.o -MF CMakeFiles/test_gff_io.dir/test_gff_io.cpp.o.d -o CMakeFiles/test_gff_io.dir/test_gff_io.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/gff_io/test_gff_io.cpp [ 11%] Linking CXX executable ../../bin/test_gff_io cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/gff_io && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_gff_io.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_gff_io.dir/link.d CMakeFiles/test_gff_io.dir/test_gff_io.cpp.o -o ../../bin/test_gff_io -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 11%] Built target test_gff_io make -f tests/graph_algorithms/CMakeFiles/test_graph_algorithms.dir/build.make tests/graph_algorithms/CMakeFiles/test_graph_algorithms.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/graph_algorithms /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/graph_algorithms /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/graph_algorithms/CMakeFiles/test_graph_algorithms.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/graph_algorithms/CMakeFiles/test_graph_algorithms.dir/build.make tests/graph_algorithms/CMakeFiles/test_graph_algorithms.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 11%] Building CXX object tests/graph_algorithms/CMakeFiles/test_graph_algorithms.dir/test_graph_algorithms.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/graph_algorithms && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/graph_algorithms/CMakeFiles/test_graph_algorithms.dir/test_graph_algorithms.cpp.o -MF CMakeFiles/test_graph_algorithms.dir/test_graph_algorithms.cpp.o.d -o CMakeFiles/test_graph_algorithms.dir/test_graph_algorithms.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/graph_algorithms/test_graph_algorithms.cpp [ 11%] Linking CXX executable ../../bin/test_consensus cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/consensus && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_consensus.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_consensus.dir/link.d CMakeFiles/test_consensus.dir/test_consensus.cpp.o -o ../../bin/test_consensus -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 11%] Built target test_consensus make -f tests/graph_align/CMakeFiles/test_graph_align.dir/build.make tests/graph_align/CMakeFiles/test_graph_align.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/graph_align /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/graph_align /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/graph_align/CMakeFiles/test_graph_align.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/graph_align/CMakeFiles/test_graph_align.dir/build.make tests/graph_align/CMakeFiles/test_graph_align.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 11%] Building CXX object tests/graph_align/CMakeFiles/test_graph_align.dir/test_graph_align.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/graph_align && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/graph_align/CMakeFiles/test_graph_align.dir/test_graph_align.cpp.o -MF CMakeFiles/test_graph_align.dir/test_graph_align.cpp.o.d -o CMakeFiles/test_graph_align.dir/test_graph_align.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/graph_align/test_graph_align.cpp [ 11%] Linking CXX executable ../../bin/test_blast cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/blast && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_blast.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_blast.dir/link.d CMakeFiles/test_blast.dir/test_blast.cpp.o -o ../../bin/test_blast -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 11%] Built target test_blast make -f tests/graph_msa/CMakeFiles/test_graph_msa.dir/build.make tests/graph_msa/CMakeFiles/test_graph_msa.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/graph_msa /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/graph_msa /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/graph_msa/CMakeFiles/test_graph_msa.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/graph_msa/CMakeFiles/test_graph_msa.dir/build.make tests/graph_msa/CMakeFiles/test_graph_msa.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 11%] Building CXX object tests/graph_msa/CMakeFiles/test_graph_msa.dir/test_graph_msa.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/graph_msa && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/graph_msa/CMakeFiles/test_graph_msa.dir/test_graph_msa.cpp.o -MF CMakeFiles/test_graph_msa.dir/test_graph_msa.cpp.o.d -o CMakeFiles/test_graph_msa.dir/test_graph_msa.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/graph_msa/test_graph_msa.cpp [ 11%] Linking CXX executable ../../bin/razers3 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/razers3 && /usr/bin/cmake -E cmake_link_script CMakeFiles/razers3.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/razers3.dir/link.d CMakeFiles/razers3.dir/razers.cpp.o CMakeFiles/razers3.dir/param_tabs.cpp.o -o ../../bin/razers3 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 11%] Built target razers3 make -f tests/graph_types/CMakeFiles/test_graph_types_basic.dir/build.make tests/graph_types/CMakeFiles/test_graph_types_basic.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/graph_types /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/graph_types /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/graph_types/CMakeFiles/test_graph_types_basic.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/graph_types/CMakeFiles/test_graph_types_basic.dir/build.make tests/graph_types/CMakeFiles/test_graph_types_basic.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 11%] Building CXX object tests/graph_types/CMakeFiles/test_graph_types_basic.dir/test_graph_types_basic.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/graph_types && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/graph_types/CMakeFiles/test_graph_types_basic.dir/test_graph_types_basic.cpp.o -MF CMakeFiles/test_graph_types_basic.dir/test_graph_types_basic.cpp.o.d -o CMakeFiles/test_graph_types_basic.dir/test_graph_types_basic.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/graph_types/test_graph_types_basic.cpp [ 11%] Linking CXX executable ../../bin/test_graph_types_basic cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/graph_types && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_graph_types_basic.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_graph_types_basic.dir/link.d CMakeFiles/test_graph_types_basic.dir/test_graph_types_basic.cpp.o -o ../../bin/test_graph_types_basic -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 11%] Built target test_graph_types_basic make -f tests/graph_types/CMakeFiles/test_graph_types_property_map.dir/build.make tests/graph_types/CMakeFiles/test_graph_types_property_map.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/graph_types /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/graph_types /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/graph_types/CMakeFiles/test_graph_types_property_map.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/graph_types/CMakeFiles/test_graph_types_property_map.dir/build.make tests/graph_types/CMakeFiles/test_graph_types_property_map.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 11%] Building CXX object tests/graph_types/CMakeFiles/test_graph_types_property_map.dir/test_graph_types_property_map.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/graph_types && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/graph_types/CMakeFiles/test_graph_types_property_map.dir/test_graph_types_property_map.cpp.o -MF CMakeFiles/test_graph_types_property_map.dir/test_graph_types_property_map.cpp.o.d -o CMakeFiles/test_graph_types_property_map.dir/test_graph_types_property_map.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/graph_types/test_graph_types_property_map.cpp [ 11%] Linking CXX executable ../../bin/test_graph_types_property_map cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/graph_types && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_graph_types_property_map.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_graph_types_property_map.dir/link.d CMakeFiles/test_graph_types_property_map.dir/test_graph_types_property_map.cpp.o -o ../../bin/test_graph_types_property_map -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 11%] Built target test_graph_types_property_map make -f tests/graph_types/CMakeFiles/test_graph_types_derived.dir/build.make tests/graph_types/CMakeFiles/test_graph_types_derived.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/graph_types /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/graph_types /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/graph_types/CMakeFiles/test_graph_types_derived.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/graph_types/CMakeFiles/test_graph_types_derived.dir/build.make tests/graph_types/CMakeFiles/test_graph_types_derived.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 11%] Building CXX object tests/graph_types/CMakeFiles/test_graph_types_derived.dir/test_graph_types_derived.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/graph_types && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/graph_types/CMakeFiles/test_graph_types_derived.dir/test_graph_types_derived.cpp.o -MF CMakeFiles/test_graph_types_derived.dir/test_graph_types_derived.cpp.o.d -o CMakeFiles/test_graph_types_derived.dir/test_graph_types_derived.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/graph_types/test_graph_types_derived.cpp [ 11%] Linking CXX executable ../../bin/test_graph_algorithms cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/graph_algorithms && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_graph_algorithms.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_graph_algorithms.dir/link.d CMakeFiles/test_graph_algorithms.dir/test_graph_algorithms.cpp.o -o ../../bin/test_graph_algorithms -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 11%] Built target test_graph_algorithms make -f tests/graph_types/CMakeFiles/test_graph_types_iterators.dir/build.make tests/graph_types/CMakeFiles/test_graph_types_iterators.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/graph_types /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/graph_types /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/graph_types/CMakeFiles/test_graph_types_iterators.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/graph_types/CMakeFiles/test_graph_types_iterators.dir/build.make tests/graph_types/CMakeFiles/test_graph_types_iterators.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 11%] Building CXX object tests/graph_types/CMakeFiles/test_graph_types_iterators.dir/test_graph_types_iterators.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/graph_types && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/graph_types/CMakeFiles/test_graph_types_iterators.dir/test_graph_types_iterators.cpp.o -MF CMakeFiles/test_graph_types_iterators.dir/test_graph_types_iterators.cpp.o.d -o CMakeFiles/test_graph_types_iterators.dir/test_graph_types_iterators.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/graph_types/test_graph_types_iterators.cpp [ 11%] Linking CXX executable ../../bin/test_graph_types_derived cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/graph_types && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_graph_types_derived.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_graph_types_derived.dir/link.d CMakeFiles/test_graph_types_derived.dir/test_graph_types_derived.cpp.o -o ../../bin/test_graph_types_derived -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 11%] Built target test_graph_types_derived make -f tests/graph_types/CMakeFiles/test_graph_types_types.dir/build.make tests/graph_types/CMakeFiles/test_graph_types_types.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/graph_types /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/graph_types /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/graph_types/CMakeFiles/test_graph_types_types.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/graph_types/CMakeFiles/test_graph_types_types.dir/build.make tests/graph_types/CMakeFiles/test_graph_types_types.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 11%] Building CXX object tests/graph_types/CMakeFiles/test_graph_types_types.dir/test_graph_types_types.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/graph_types && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/graph_types/CMakeFiles/test_graph_types_types.dir/test_graph_types_types.cpp.o -MF CMakeFiles/test_graph_types_types.dir/test_graph_types_types.cpp.o.d -o CMakeFiles/test_graph_types_types.dir/test_graph_types_types.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/graph_types/test_graph_types_types.cpp [ 11%] Linking CXX executable ../../bin/test_consensus_v2 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/consensus_v2 && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_consensus_v2.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_consensus_v2.dir/link.d CMakeFiles/test_consensus_v2.dir/test_consensus_v2.cpp.o -o ../../bin/test_consensus_v2 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 11%] Built target test_consensus_v2 make -f tests/graph_types/CMakeFiles/test_graph_types_utils.dir/build.make tests/graph_types/CMakeFiles/test_graph_types_utils.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/graph_types /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/graph_types /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/graph_types/CMakeFiles/test_graph_types_utils.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/graph_types/CMakeFiles/test_graph_types_utils.dir/build.make tests/graph_types/CMakeFiles/test_graph_types_utils.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 11%] Building CXX object tests/graph_types/CMakeFiles/test_graph_types_utils.dir/test_graph_types_utils.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/graph_types && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/graph_types/CMakeFiles/test_graph_types_utils.dir/test_graph_types_utils.cpp.o -MF CMakeFiles/test_graph_types_utils.dir/test_graph_types_utils.cpp.o.d -o CMakeFiles/test_graph_types_utils.dir/test_graph_types_utils.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/graph_types/test_graph_types_utils.cpp [ 11%] Linking CXX executable ../../bin/test_graph_align cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/graph_align && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_graph_align.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_graph_align.dir/link.d CMakeFiles/test_graph_align.dir/test_graph_align.cpp.o -o ../../bin/test_graph_align -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 11%] Built target test_graph_align make -f tests/index/CMakeFiles/test_index_creation.dir/build.make tests/index/CMakeFiles/test_index_creation.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/index /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index/CMakeFiles/test_index_creation.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/index/CMakeFiles/test_index_creation.dir/build.make tests/index/CMakeFiles/test_index_creation.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 11%] Building CXX object tests/index/CMakeFiles/test_index_creation.dir/test_index_creation.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/index/CMakeFiles/test_index_creation.dir/test_index_creation.cpp.o -MF CMakeFiles/test_index_creation.dir/test_index_creation.cpp.o.d -o CMakeFiles/test_index_creation.dir/test_index_creation.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/index/test_index_creation.cpp [ 12%] Linking CXX executable ../../bin/test_graph_types_utils cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/graph_types && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_graph_types_utils.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_graph_types_utils.dir/link.d CMakeFiles/test_graph_types_utils.dir/test_graph_types_utils.cpp.o -o ../../bin/test_graph_types_utils -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 12%] Built target test_graph_types_utils make -f tests/index/CMakeFiles/test_index_crosscompare_char.dir/build.make tests/index/CMakeFiles/test_index_crosscompare_char.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/index /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index/CMakeFiles/test_index_crosscompare_char.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/index/CMakeFiles/test_index_crosscompare_char.dir/build.make tests/index/CMakeFiles/test_index_crosscompare_char.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 12%] Building CXX object tests/index/CMakeFiles/test_index_crosscompare_char.dir/test_index_crosscompare_char.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/index/CMakeFiles/test_index_crosscompare_char.dir/test_index_crosscompare_char.cpp.o -MF CMakeFiles/test_index_crosscompare_char.dir/test_index_crosscompare_char.cpp.o.d -o CMakeFiles/test_index_crosscompare_char.dir/test_index_crosscompare_char.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/index/test_index_crosscompare_char.cpp [ 12%] Linking CXX executable ../../bin/test_graph_types_iterators cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/graph_types && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_graph_types_iterators.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_graph_types_iterators.dir/link.d CMakeFiles/test_graph_types_iterators.dir/test_graph_types_iterators.cpp.o -o ../../bin/test_graph_types_iterators -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 12%] Built target test_graph_types_iterators make -f tests/index/CMakeFiles/test_index_crosscompare_char_dfi.dir/build.make tests/index/CMakeFiles/test_index_crosscompare_char_dfi.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/index /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index/CMakeFiles/test_index_crosscompare_char_dfi.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/index/CMakeFiles/test_index_crosscompare_char_dfi.dir/build.make tests/index/CMakeFiles/test_index_crosscompare_char_dfi.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 12%] Building CXX object tests/index/CMakeFiles/test_index_crosscompare_char_dfi.dir/test_index_crosscompare_char_dfi.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/index/CMakeFiles/test_index_crosscompare_char_dfi.dir/test_index_crosscompare_char_dfi.cpp.o -MF CMakeFiles/test_index_crosscompare_char_dfi.dir/test_index_crosscompare_char_dfi.cpp.o.d -o CMakeFiles/test_index_crosscompare_char_dfi.dir/test_index_crosscompare_char_dfi.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/index/test_index_crosscompare_char_dfi.cpp [ 13%] Linking CXX executable ../../bin/test_graph_msa cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/graph_msa && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_graph_msa.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_graph_msa.dir/link.d CMakeFiles/test_graph_msa.dir/test_graph_msa.cpp.o -o ../../bin/test_graph_msa -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 13%] Built target test_graph_msa make -f tests/index/CMakeFiles/test_index_crosscompare_dna.dir/build.make tests/index/CMakeFiles/test_index_crosscompare_dna.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/index /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index/CMakeFiles/test_index_crosscompare_dna.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/index/CMakeFiles/test_index_crosscompare_dna.dir/build.make tests/index/CMakeFiles/test_index_crosscompare_dna.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 13%] Building CXX object tests/index/CMakeFiles/test_index_crosscompare_dna.dir/test_index_crosscompare_dna.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/index/CMakeFiles/test_index_crosscompare_dna.dir/test_index_crosscompare_dna.cpp.o -MF CMakeFiles/test_index_crosscompare_dna.dir/test_index_crosscompare_dna.cpp.o.d -o CMakeFiles/test_index_crosscompare_dna.dir/test_index_crosscompare_dna.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/index/test_index_crosscompare_dna.cpp [ 13%] Linking CXX executable ../../bin/test_index_crosscompare_char_dfi cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_index_crosscompare_char_dfi.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_index_crosscompare_char_dfi.dir/link.d CMakeFiles/test_index_crosscompare_char_dfi.dir/test_index_crosscompare_char_dfi.cpp.o -o ../../bin/test_index_crosscompare_char_dfi -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 13%] Built target test_index_crosscompare_char_dfi make -f tests/index/CMakeFiles/test_index_crosscompare_dna_dfi.dir/build.make tests/index/CMakeFiles/test_index_crosscompare_dna_dfi.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/index /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index/CMakeFiles/test_index_crosscompare_dna_dfi.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/index/CMakeFiles/test_index_crosscompare_dna_dfi.dir/build.make tests/index/CMakeFiles/test_index_crosscompare_dna_dfi.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 13%] Building CXX object tests/index/CMakeFiles/test_index_crosscompare_dna_dfi.dir/test_index_crosscompare_dna_dfi.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/index/CMakeFiles/test_index_crosscompare_dna_dfi.dir/test_index_crosscompare_dna_dfi.cpp.o -MF CMakeFiles/test_index_crosscompare_dna_dfi.dir/test_index_crosscompare_dna_dfi.cpp.o.d -o CMakeFiles/test_index_crosscompare_dna_dfi.dir/test_index_crosscompare_dna_dfi.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/index/test_index_crosscompare_dna_dfi.cpp [ 13%] Linking CXX executable ../../bin/test_find cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/find && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_find.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_find.dir/link.d CMakeFiles/test_find.dir/test_find.cpp.o -o ../../bin/test_find -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 13%] Built target test_find make -f tests/index/CMakeFiles/test_index_qgram.dir/build.make tests/index/CMakeFiles/test_index_qgram.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/index /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index/CMakeFiles/test_index_qgram.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/index/CMakeFiles/test_index_qgram.dir/build.make tests/index/CMakeFiles/test_index_qgram.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 14%] Building CXX object tests/index/CMakeFiles/test_index_qgram.dir/test_index_qgram.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/index/CMakeFiles/test_index_qgram.dir/test_index_qgram.cpp.o -MF CMakeFiles/test_index_qgram.dir/test_index_qgram.cpp.o.d -o CMakeFiles/test_index_qgram.dir/test_index_qgram.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/index/test_index_qgram.cpp [ 14%] Linking CXX executable ../../bin/test_graph_types_types cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/graph_types && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_graph_types_types.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_graph_types_types.dir/link.d CMakeFiles/test_graph_types_types.dir/test_graph_types_types.cpp.o -o ../../bin/test_graph_types_types -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 14%] Built target test_graph_types_types make -f tests/index/CMakeFiles/test_index_sa_bwtwalk.dir/build.make tests/index/CMakeFiles/test_index_sa_bwtwalk.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/index /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index/CMakeFiles/test_index_sa_bwtwalk.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/index/CMakeFiles/test_index_sa_bwtwalk.dir/build.make tests/index/CMakeFiles/test_index_sa_bwtwalk.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 14%] Building CXX object tests/index/CMakeFiles/test_index_sa_bwtwalk.dir/test_index_sa_bwtwalk.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/index/CMakeFiles/test_index_sa_bwtwalk.dir/test_index_sa_bwtwalk.cpp.o -MF CMakeFiles/test_index_sa_bwtwalk.dir/test_index_sa_bwtwalk.cpp.o.d -o CMakeFiles/test_index_sa_bwtwalk.dir/test_index_sa_bwtwalk.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/index/test_index_sa_bwtwalk.cpp [ 14%] Linking CXX executable ../../bin/test_index_crosscompare_dna_dfi cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_index_crosscompare_dna_dfi.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_index_crosscompare_dna_dfi.dir/link.d CMakeFiles/test_index_crosscompare_dna_dfi.dir/test_index_crosscompare_dna_dfi.cpp.o -o ../../bin/test_index_crosscompare_dna_dfi -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 14%] Built target test_index_crosscompare_dna_dfi make -f tests/index/CMakeFiles/test_index_shapes.dir/build.make tests/index/CMakeFiles/test_index_shapes.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/index /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index/CMakeFiles/test_index_shapes.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/index/CMakeFiles/test_index_shapes.dir/build.make tests/index/CMakeFiles/test_index_shapes.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 14%] Building CXX object tests/index/CMakeFiles/test_index_shapes.dir/test_index_shapes.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/index/CMakeFiles/test_index_shapes.dir/test_index_shapes.cpp.o -MF CMakeFiles/test_index_shapes.dir/test_index_shapes.cpp.o.d -o CMakeFiles/test_index_shapes.dir/test_index_shapes.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/index/test_index_shapes.cpp [ 14%] Linking CXX executable ../../bin/test_index_qgram cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_index_qgram.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_index_qgram.dir/link.d CMakeFiles/test_index_qgram.dir/test_index_qgram.cpp.o -o ../../bin/test_index_qgram -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 14%] Built target test_index_qgram make -f tests/index/CMakeFiles/test_index_drawing.dir/build.make tests/index/CMakeFiles/test_index_drawing.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/index /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index/CMakeFiles/test_index_drawing.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/index/CMakeFiles/test_index_drawing.dir/build.make tests/index/CMakeFiles/test_index_drawing.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 14%] Building CXX object tests/index/CMakeFiles/test_index_drawing.dir/test_index_drawing.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/index/CMakeFiles/test_index_drawing.dir/test_index_drawing.cpp.o -MF CMakeFiles/test_index_drawing.dir/test_index_drawing.cpp.o.d -o CMakeFiles/test_index_drawing.dir/test_index_drawing.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/index/test_index_drawing.cpp [ 14%] Linking CXX executable ../../bin/test_index_shapes cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_index_shapes.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_index_shapes.dir/link.d CMakeFiles/test_index_shapes.dir/test_index_shapes.cpp.o -o ../../bin/test_index_shapes -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 14%] Built target test_index_shapes make -f tests/index/CMakeFiles/test_index_fm_rank_dictionary.dir/build.make tests/index/CMakeFiles/test_index_fm_rank_dictionary.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/index /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index/CMakeFiles/test_index_fm_rank_dictionary.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/index/CMakeFiles/test_index_fm_rank_dictionary.dir/build.make tests/index/CMakeFiles/test_index_fm_rank_dictionary.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 14%] Building CXX object tests/index/CMakeFiles/test_index_fm_rank_dictionary.dir/test_index_fm_rank_dictionary.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/index/CMakeFiles/test_index_fm_rank_dictionary.dir/test_index_fm_rank_dictionary.cpp.o -MF CMakeFiles/test_index_fm_rank_dictionary.dir/test_index_fm_rank_dictionary.cpp.o.d -o CMakeFiles/test_index_fm_rank_dictionary.dir/test_index_fm_rank_dictionary.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/index/test_index_fm_rank_dictionary.cpp [ 14%] Linking CXX executable ../../bin/test_index_crosscompare_char cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_index_crosscompare_char.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_index_crosscompare_char.dir/link.d CMakeFiles/test_index_crosscompare_char.dir/test_index_crosscompare_char.cpp.o -o ../../bin/test_index_crosscompare_char -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 14%] Built target test_index_crosscompare_char make -f tests/index/CMakeFiles/test_index_fm_sparse_string.dir/build.make tests/index/CMakeFiles/test_index_fm_sparse_string.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/index /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index/CMakeFiles/test_index_fm_sparse_string.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/index/CMakeFiles/test_index_fm_sparse_string.dir/build.make tests/index/CMakeFiles/test_index_fm_sparse_string.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 14%] Building CXX object tests/index/CMakeFiles/test_index_fm_sparse_string.dir/test_index_fm_sparse_string.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/index/CMakeFiles/test_index_fm_sparse_string.dir/test_index_fm_sparse_string.cpp.o -MF CMakeFiles/test_index_fm_sparse_string.dir/test_index_fm_sparse_string.cpp.o.d -o CMakeFiles/test_index_fm_sparse_string.dir/test_index_fm_sparse_string.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/index/test_index_fm_sparse_string.cpp [ 14%] Linking CXX executable ../../bin/test_index_drawing cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_index_drawing.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_index_drawing.dir/link.d CMakeFiles/test_index_drawing.dir/test_index_drawing.cpp.o -o ../../bin/test_index_drawing -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 14%] Built target test_index_drawing make -f tests/index/CMakeFiles/test_index_base.dir/build.make tests/index/CMakeFiles/test_index_base.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/index /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index/CMakeFiles/test_index_base.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/index/CMakeFiles/test_index_base.dir/build.make tests/index/CMakeFiles/test_index_base.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 14%] Building CXX object tests/index/CMakeFiles/test_index_base.dir/test_index_base.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/index/CMakeFiles/test_index_base.dir/test_index_base.cpp.o -MF CMakeFiles/test_index_base.dir/test_index_base.cpp.o.d -o CMakeFiles/test_index_base.dir/test_index_base.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/index/test_index_base.cpp [ 14%] Linking CXX executable ../../bin/test_index_sa_bwtwalk cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_index_sa_bwtwalk.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_index_sa_bwtwalk.dir/link.d CMakeFiles/test_index_sa_bwtwalk.dir/test_index_sa_bwtwalk.cpp.o -o ../../bin/test_index_sa_bwtwalk -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 14%] Built target test_index_sa_bwtwalk make -f tests/index/CMakeFiles/test_index_fm.dir/build.make tests/index/CMakeFiles/test_index_fm.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/index /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index/CMakeFiles/test_index_fm.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/index/CMakeFiles/test_index_fm.dir/build.make tests/index/CMakeFiles/test_index_fm.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 14%] Building CXX object tests/index/CMakeFiles/test_index_fm.dir/test_index_fm.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/index/CMakeFiles/test_index_fm.dir/test_index_fm.cpp.o -MF CMakeFiles/test_index_fm.dir/test_index_fm.cpp.o.d -o CMakeFiles/test_index_fm.dir/test_index_fm.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/index/test_index_fm.cpp [ 14%] Linking CXX executable ../../bin/test_index_fm_sparse_string cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_index_fm_sparse_string.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_index_fm_sparse_string.dir/link.d CMakeFiles/test_index_fm_sparse_string.dir/test_index_fm_sparse_string.cpp.o -o ../../bin/test_index_fm_sparse_string -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 14%] Built target test_index_fm_sparse_string make -f tests/index/CMakeFiles/test_index_bifm.dir/build.make tests/index/CMakeFiles/test_index_bifm.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/index /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index/CMakeFiles/test_index_bifm.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/index/CMakeFiles/test_index_bifm.dir/build.make tests/index/CMakeFiles/test_index_bifm.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 14%] Building CXX object tests/index/CMakeFiles/test_index_bifm.dir/test_index_bifm.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/index/CMakeFiles/test_index_bifm.dir/test_index_bifm.cpp.o -MF CMakeFiles/test_index_bifm.dir/test_index_bifm.cpp.o.d -o CMakeFiles/test_index_bifm.dir/test_index_bifm.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/index/test_index_bifm.cpp [ 14%] Linking CXX executable ../../bin/test_align cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/align && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_align.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_align.dir/link.d CMakeFiles/test_align.dir/test_align.cpp.o -o ../../bin/test_align -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 14%] Built target test_align make -f tests/index/CMakeFiles/test_index_vstree.dir/build.make tests/index/CMakeFiles/test_index_vstree.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/index /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index/CMakeFiles/test_index_vstree.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/index/CMakeFiles/test_index_vstree.dir/build.make tests/index/CMakeFiles/test_index_vstree.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 14%] Building CXX object tests/index/CMakeFiles/test_index_vstree.dir/test_index_vstree.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/index/CMakeFiles/test_index_vstree.dir/test_index_vstree.cpp.o -MF CMakeFiles/test_index_vstree.dir/test_index_vstree.cpp.o.d -o CMakeFiles/test_index_vstree.dir/test_index_vstree.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/index/test_index_vstree.cpp [ 15%] Linking CXX executable ../../bin/test_index_crosscompare_dna cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_index_crosscompare_dna.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_index_crosscompare_dna.dir/link.d CMakeFiles/test_index_crosscompare_dna.dir/test_index_crosscompare_dna.cpp.o -o ../../bin/test_index_crosscompare_dna -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 15%] Built target test_index_crosscompare_dna make -f tests/index/CMakeFiles/test_index_stree_iterators.dir/build.make tests/index/CMakeFiles/test_index_stree_iterators.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/index /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index/CMakeFiles/test_index_stree_iterators.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/index/CMakeFiles/test_index_stree_iterators.dir/build.make tests/index/CMakeFiles/test_index_stree_iterators.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 15%] Building CXX object tests/index/CMakeFiles/test_index_stree_iterators.dir/test_index_stree_iterators.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/index/CMakeFiles/test_index_stree_iterators.dir/test_index_stree_iterators.cpp.o -MF CMakeFiles/test_index_stree_iterators.dir/test_index_stree_iterators.cpp.o.d -o CMakeFiles/test_index_stree_iterators.dir/test_index_stree_iterators.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/index/test_index_stree_iterators.cpp [ 15%] Linking CXX executable ../../bin/test_index_fm_rank_dictionary cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_index_fm_rank_dictionary.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_index_fm_rank_dictionary.dir/link.d CMakeFiles/test_index_fm_rank_dictionary.dir/test_index_fm_rank_dictionary.cpp.o -o ../../bin/test_index_fm_rank_dictionary -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 15%] Built target test_index_fm_rank_dictionary make -f tests/index/CMakeFiles/test_index_view.dir/build.make tests/index/CMakeFiles/test_index_view.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/index /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index/CMakeFiles/test_index_view.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/index/CMakeFiles/test_index_view.dir/build.make tests/index/CMakeFiles/test_index_view.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 17%] Building CXX object tests/index/CMakeFiles/test_index_view.dir/test_index_view.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/index/CMakeFiles/test_index_view.dir/test_index_view.cpp.o -MF CMakeFiles/test_index_view.dir/test_index_view.cpp.o.d -o CMakeFiles/test_index_view.dir/test_index_view.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/index/test_index_view.cpp [ 17%] Linking CXX executable ../../bin/test_index_view cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_index_view.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_index_view.dir/link.d CMakeFiles/test_index_view.dir/test_index_view.cpp.o -o ../../bin/test_index_view -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 17%] Built target test_index_view make -f tests/index/CMakeFiles/test_index_finder.dir/build.make tests/index/CMakeFiles/test_index_finder.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/index /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index/CMakeFiles/test_index_finder.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/index/CMakeFiles/test_index_finder.dir/build.make tests/index/CMakeFiles/test_index_finder.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 17%] Building CXX object tests/index/CMakeFiles/test_index_finder.dir/test_index_finder.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/index/CMakeFiles/test_index_finder.dir/test_index_finder.cpp.o -MF CMakeFiles/test_index_finder.dir/test_index_finder.cpp.o.d -o CMakeFiles/test_index_finder.dir/test_index_finder.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/index/test_index_finder.cpp [ 17%] Linking CXX executable ../../bin/test_index_creation cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_index_creation.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_index_creation.dir/link.d CMakeFiles/test_index_creation.dir/test_index_creation.cpp.o -o ../../bin/test_index_creation -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 17%] Built target test_index_creation make -f tests/index/CMakeFiles/test_find_backtracking.dir/build.make tests/index/CMakeFiles/test_find_backtracking.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/index /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index/CMakeFiles/test_find_backtracking.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/index/CMakeFiles/test_find_backtracking.dir/build.make tests/index/CMakeFiles/test_find_backtracking.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 18%] Building CXX object tests/index/CMakeFiles/test_find_backtracking.dir/test_find_backtracking.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/index/CMakeFiles/test_find_backtracking.dir/test_find_backtracking.cpp.o -MF CMakeFiles/test_find_backtracking.dir/test_find_backtracking.cpp.o.d -o CMakeFiles/test_find_backtracking.dir/test_find_backtracking.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/index/test_find_backtracking.cpp [ 18%] Linking CXX executable ../../bin/test_index_fm cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_index_fm.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_index_fm.dir/link.d CMakeFiles/test_index_fm.dir/test_index_fm.cpp.o -o ../../bin/test_index_fm -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 18%] Built target test_index_fm make -f tests/index/CMakeFiles/test_find2_index_approx.dir/build.make tests/index/CMakeFiles/test_find2_index_approx.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/index /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index/CMakeFiles/test_find2_index_approx.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/index/CMakeFiles/test_find2_index_approx.dir/build.make tests/index/CMakeFiles/test_find2_index_approx.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 18%] Building CXX object tests/index/CMakeFiles/test_find2_index_approx.dir/test_find2_index_approx.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/index/CMakeFiles/test_find2_index_approx.dir/test_find2_index_approx.cpp.o -MF CMakeFiles/test_find2_index_approx.dir/test_find2_index_approx.cpp.o.d -o CMakeFiles/test_find2_index_approx.dir/test_find2_index_approx.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/index/test_find2_index_approx.cpp [ 18%] Linking CXX executable ../../bin/test_find_backtracking cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_find_backtracking.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_find_backtracking.dir/link.d CMakeFiles/test_find_backtracking.dir/test_find_backtracking.cpp.o -o ../../bin/test_find_backtracking -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 18%] Built target test_find_backtracking make -f tests/index/CMakeFiles/test_index_repeats.dir/build.make tests/index/CMakeFiles/test_index_repeats.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/index /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index/CMakeFiles/test_index_repeats.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/index/CMakeFiles/test_index_repeats.dir/build.make tests/index/CMakeFiles/test_index_repeats.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 18%] Building CXX object tests/index/CMakeFiles/test_index_repeats.dir/test_index_repeats.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/index/CMakeFiles/test_index_repeats.dir/test_index_repeats.cpp.o -MF CMakeFiles/test_index_repeats.dir/test_index_repeats.cpp.o.d -o CMakeFiles/test_index_repeats.dir/test_index_repeats.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/index/test_index_repeats.cpp [ 18%] Linking CXX executable ../../bin/test_index_vstree cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_index_vstree.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_index_vstree.dir/link.d CMakeFiles/test_index_vstree.dir/test_index_vstree.cpp.o -o ../../bin/test_index_vstree -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 18%] Built target test_index_vstree make -f tests/index/CMakeFiles/test_index_swift.dir/build.make tests/index/CMakeFiles/test_index_swift.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/index /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index/CMakeFiles/test_index_swift.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/index/CMakeFiles/test_index_swift.dir/build.make tests/index/CMakeFiles/test_index_swift.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 18%] Building CXX object tests/index/CMakeFiles/test_index_swift.dir/test_index_swift.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/index/CMakeFiles/test_index_swift.dir/test_index_swift.cpp.o -MF CMakeFiles/test_index_swift.dir/test_index_swift.cpp.o.d -o CMakeFiles/test_index_swift.dir/test_index_swift.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/index/test_index_swift.cpp [ 18%] Linking CXX executable ../../bin/test_index_repeats cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_index_repeats.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_index_repeats.dir/link.d CMakeFiles/test_index_repeats.dir/test_index_repeats.cpp.o -o ../../bin/test_index_repeats -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 18%] Built target test_index_repeats make -f tests/journaled_set/CMakeFiles/test_journaled_set.dir/build.make tests/journaled_set/CMakeFiles/test_journaled_set.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/journaled_set /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/journaled_set /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/journaled_set/CMakeFiles/test_journaled_set.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/journaled_set/CMakeFiles/test_journaled_set.dir/build.make tests/journaled_set/CMakeFiles/test_journaled_set.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 18%] Building CXX object tests/journaled_set/CMakeFiles/test_journaled_set.dir/test_journaled_set.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/journaled_set && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/journaled_set/CMakeFiles/test_journaled_set.dir/test_journaled_set.cpp.o -MF CMakeFiles/test_journaled_set.dir/test_journaled_set.cpp.o.d -o CMakeFiles/test_journaled_set.dir/test_journaled_set.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/journaled_set/test_journaled_set.cpp [ 18%] Linking CXX executable ../../bin/test_index_base cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_index_base.dir/link.txt --verbose=1 [ 18%] Linking CXX executable ../../bin/test_index_swift cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_index_swift.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_index_swift.dir/link.d CMakeFiles/test_index_swift.dir/test_index_swift.cpp.o -o ../../bin/test_index_swift -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 18%] Built target test_index_swift make -f tests/journaled_string_tree/CMakeFiles/test_basic_observable.dir/build.make tests/journaled_string_tree/CMakeFiles/test_basic_observable.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/journaled_string_tree /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/journaled_string_tree /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/journaled_string_tree/CMakeFiles/test_basic_observable.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/journaled_string_tree/CMakeFiles/test_basic_observable.dir/build.make tests/journaled_string_tree/CMakeFiles/test_basic_observable.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 18%] Building CXX object tests/journaled_string_tree/CMakeFiles/test_basic_observable.dir/test_basic_observable.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/journaled_string_tree && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/journaled_string_tree/CMakeFiles/test_basic_observable.dir/test_basic_observable.cpp.o -MF CMakeFiles/test_basic_observable.dir/test_basic_observable.cpp.o.d -o CMakeFiles/test_basic_observable.dir/test_basic_observable.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/journaled_string_tree/test_basic_observable.cpp /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_index_base.dir/link.d CMakeFiles/test_index_base.dir/test_index_base.cpp.o -o ../../bin/test_index_base -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 18%] Built target test_index_base make -f tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree.dir/build.make tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/journaled_string_tree /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/journaled_string_tree /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree.dir/build.make tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 18%] Building CXX object tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree.dir/test_journaled_string_tree.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/journaled_string_tree && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree.dir/test_journaled_string_tree.cpp.o -MF CMakeFiles/test_journaled_string_tree.dir/test_journaled_string_tree.cpp.o.d -o CMakeFiles/test_journaled_string_tree.dir/test_journaled_string_tree.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/journaled_string_tree/test_journaled_string_tree.cpp [ 18%] Linking CXX executable ../../bin/test_basic_observable cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/journaled_string_tree && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_basic_observable.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_basic_observable.dir/link.d CMakeFiles/test_basic_observable.dir/test_basic_observable.cpp.o -o ../../bin/test_basic_observable -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 18%] Built target test_basic_observable make -f tests/journaled_string_tree/CMakeFiles/test_delta_map.dir/build.make tests/journaled_string_tree/CMakeFiles/test_delta_map.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/journaled_string_tree /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/journaled_string_tree /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/journaled_string_tree/CMakeFiles/test_delta_map.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/journaled_string_tree/CMakeFiles/test_delta_map.dir/build.make tests/journaled_string_tree/CMakeFiles/test_delta_map.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 18%] Building CXX object tests/journaled_string_tree/CMakeFiles/test_delta_map.dir/test_delta_map.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/journaled_string_tree && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/journaled_string_tree/CMakeFiles/test_delta_map.dir/test_delta_map.cpp.o -MF CMakeFiles/test_delta_map.dir/test_delta_map.cpp.o.d -o CMakeFiles/test_delta_map.dir/test_delta_map.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/journaled_string_tree/test_delta_map.cpp [ 18%] Linking CXX executable ../../bin/test_journaled_set cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/journaled_set && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_journaled_set.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_journaled_set.dir/link.d CMakeFiles/test_journaled_set.dir/test_journaled_set.cpp.o -o ../../bin/test_journaled_set -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 18%] Built target test_journaled_set make -f tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree_traverser.dir/build.make tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree_traverser.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/journaled_string_tree /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/journaled_string_tree /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree_traverser.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree_traverser.dir/build.make tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree_traverser.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 18%] Building CXX object tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree_traverser.dir/test_journaled_string_tree_traverser.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/journaled_string_tree && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree_traverser.dir/test_journaled_string_tree_traverser.cpp.o -MF CMakeFiles/test_journaled_string_tree_traverser.dir/test_journaled_string_tree_traverser.cpp.o.d -o CMakeFiles/test_journaled_string_tree_traverser.dir/test_journaled_string_tree_traverser.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/journaled_string_tree/test_journaled_string_tree_traverser.cpp [ 18%] Linking CXX executable ../../bin/test_journaled_string_tree cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/journaled_string_tree && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_journaled_string_tree.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_journaled_string_tree.dir/link.d CMakeFiles/test_journaled_string_tree.dir/test_journaled_string_tree.cpp.o -o ../../bin/test_journaled_string_tree -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 18%] Built target test_journaled_string_tree make -f tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree_find.dir/build.make tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree_find.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/journaled_string_tree /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/journaled_string_tree /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree_find.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree_find.dir/build.make tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree_find.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 18%] Building CXX object tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree_find.dir/test_journaled_string_tree_find.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/journaled_string_tree && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/journaled_string_tree/CMakeFiles/test_journaled_string_tree_find.dir/test_journaled_string_tree_find.cpp.o -MF CMakeFiles/test_journaled_string_tree_find.dir/test_journaled_string_tree_find.cpp.o.d -o CMakeFiles/test_journaled_string_tree_find.dir/test_journaled_string_tree_find.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/journaled_string_tree/test_journaled_string_tree_find.cpp [ 18%] Linking CXX executable ../../bin/test_index_bifm cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_index_bifm.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_index_bifm.dir/link.d CMakeFiles/test_index_bifm.dir/test_index_bifm.cpp.o -o ../../bin/test_index_bifm -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 18%] Built target test_index_bifm make -f tests/map/CMakeFiles/test_map.dir/build.make tests/map/CMakeFiles/test_map.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/map /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/map /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/map/CMakeFiles/test_map.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/map/CMakeFiles/test_map.dir/build.make tests/map/CMakeFiles/test_map.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 19%] Building CXX object tests/map/CMakeFiles/test_map.dir/test_map.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/map && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/map/CMakeFiles/test_map.dir/test_map.cpp.o -MF CMakeFiles/test_map.dir/test_map.cpp.o.d -o CMakeFiles/test_map.dir/test_map.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/map/test_map.cpp [ 19%] Linking CXX executable ../../bin/test_delta_map cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/journaled_string_tree && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_delta_map.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_delta_map.dir/link.d CMakeFiles/test_delta_map.dir/test_delta_map.cpp.o -o ../../bin/test_delta_map -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 19%] Built target test_delta_map make -f tests/misc/CMakeFiles/test_misc.dir/build.make tests/misc/CMakeFiles/test_misc.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/misc /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/misc /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/misc/CMakeFiles/test_misc.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/misc/CMakeFiles/test_misc.dir/build.make tests/misc/CMakeFiles/test_misc.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 19%] Building CXX object tests/misc/CMakeFiles/test_misc.dir/test_misc.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/misc && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/misc/CMakeFiles/test_misc.dir/test_misc.cpp.o -MF CMakeFiles/test_misc.dir/test_misc.cpp.o.d -o CMakeFiles/test_misc.dir/test_misc.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/misc/test_misc.cpp [ 19%] Linking CXX executable ../../bin/test_journaled_string_tree_traverser cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/journaled_string_tree && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_journaled_string_tree_traverser.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_journaled_string_tree_traverser.dir/link.d CMakeFiles/test_journaled_string_tree_traverser.dir/test_journaled_string_tree_traverser.cpp.o -o ../../bin/test_journaled_string_tree_traverser -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 19%] Built target test_journaled_string_tree_traverser make -f tests/modifier/CMakeFiles/test_modifier.dir/build.make tests/modifier/CMakeFiles/test_modifier.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/modifier /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/modifier /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/modifier/CMakeFiles/test_modifier.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/modifier/CMakeFiles/test_modifier.dir/build.make tests/modifier/CMakeFiles/test_modifier.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 19%] Building CXX object tests/modifier/CMakeFiles/test_modifier.dir/test_modifier.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/modifier && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/modifier/CMakeFiles/test_modifier.dir/test_modifier.cpp.o -MF CMakeFiles/test_modifier.dir/test_modifier.cpp.o.d -o CMakeFiles/test_modifier.dir/test_modifier.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/modifier/test_modifier.cpp [ 19%] Linking CXX executable ../../bin/test_map cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/map && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_map.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_map.dir/link.d CMakeFiles/test_map.dir/test_map.cpp.o -o ../../bin/test_map -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 19%] Built target test_map make -f tests/modifier_cyclic_shape/CMakeFiles/test_modifier_cyclic_shape.dir/build.make tests/modifier_cyclic_shape/CMakeFiles/test_modifier_cyclic_shape.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/modifier_cyclic_shape /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/modifier_cyclic_shape /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/modifier_cyclic_shape/CMakeFiles/test_modifier_cyclic_shape.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/modifier_cyclic_shape/CMakeFiles/test_modifier_cyclic_shape.dir/build.make tests/modifier_cyclic_shape/CMakeFiles/test_modifier_cyclic_shape.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 19%] Building CXX object tests/modifier_cyclic_shape/CMakeFiles/test_modifier_cyclic_shape.dir/test_modifier_cyclic_shape.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/modifier_cyclic_shape && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/modifier_cyclic_shape/CMakeFiles/test_modifier_cyclic_shape.dir/test_modifier_cyclic_shape.cpp.o -MF CMakeFiles/test_modifier_cyclic_shape.dir/test_modifier_cyclic_shape.cpp.o.d -o CMakeFiles/test_modifier_cyclic_shape.dir/test_modifier_cyclic_shape.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/modifier_cyclic_shape/test_modifier_cyclic_shape.cpp [ 19%] Linking CXX executable ../../bin/test_modifier_cyclic_shape cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/modifier_cyclic_shape && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_modifier_cyclic_shape.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_modifier_cyclic_shape.dir/link.d CMakeFiles/test_modifier_cyclic_shape.dir/test_modifier_cyclic_shape.cpp.o -o ../../bin/test_modifier_cyclic_shape -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 19%] Built target test_modifier_cyclic_shape make -f tests/multiple_translation_units/CMakeFiles/test_multiple_translation_units.dir/build.make tests/multiple_translation_units/CMakeFiles/test_multiple_translation_units.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/multiple_translation_units /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/multiple_translation_units /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/multiple_translation_units/CMakeFiles/test_multiple_translation_units.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/multiple_translation_units/CMakeFiles/test_multiple_translation_units.dir/build.make tests/multiple_translation_units/CMakeFiles/test_multiple_translation_units.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 19%] Building CXX object tests/multiple_translation_units/CMakeFiles/test_multiple_translation_units.dir/test_multiple_translation_units.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/multiple_translation_units && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/multiple_translation_units/CMakeFiles/test_multiple_translation_units.dir/test_multiple_translation_units.cpp.o -MF CMakeFiles/test_multiple_translation_units.dir/test_multiple_translation_units.cpp.o.d -o CMakeFiles/test_multiple_translation_units.dir/test_multiple_translation_units.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/multiple_translation_units/test_multiple_translation_units.cpp [ 19%] Linking CXX executable ../../bin/test_journaled_string_tree_find cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/journaled_string_tree && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_journaled_string_tree_find.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_journaled_string_tree_find.dir/link.d CMakeFiles/test_journaled_string_tree_find.dir/test_journaled_string_tree_find.cpp.o -o ../../bin/test_journaled_string_tree_find -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 19%] Built target test_journaled_string_tree_find [ 19%] Building CXX object tests/multiple_translation_units/CMakeFiles/test_multiple_translation_units.dir/test_multiple_translation_units_2.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/multiple_translation_units && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/multiple_translation_units/CMakeFiles/test_multiple_translation_units.dir/test_multiple_translation_units_2.cpp.o -MF CMakeFiles/test_multiple_translation_units.dir/test_multiple_translation_units_2.cpp.o.d -o CMakeFiles/test_multiple_translation_units.dir/test_multiple_translation_units_2.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/multiple_translation_units/test_multiple_translation_units_2.cpp [ 19%] Linking CXX executable ../../bin/test_find2_index_approx cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_find2_index_approx.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_find2_index_approx.dir/link.d CMakeFiles/test_find2_index_approx.dir/test_find2_index_approx.cpp.o -o ../../bin/test_find2_index_approx -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 19%] Built target test_find2_index_approx make -f tests/parallel/CMakeFiles/test_parallel.dir/build.make tests/parallel/CMakeFiles/test_parallel.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/parallel /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/parallel /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/parallel/CMakeFiles/test_parallel.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/parallel/CMakeFiles/test_parallel.dir/build.make tests/parallel/CMakeFiles/test_parallel.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 19%] Building CXX object tests/parallel/CMakeFiles/test_parallel.dir/test_parallel.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/parallel && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/parallel/CMakeFiles/test_parallel.dir/test_parallel.cpp.o -MF CMakeFiles/test_parallel.dir/test_parallel.cpp.o.d -o CMakeFiles/test_parallel.dir/test_parallel.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/parallel/test_parallel.cpp [ 19%] Linking CXX executable ../../bin/test_misc cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/misc && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_misc.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_misc.dir/link.d CMakeFiles/test_misc.dir/test_misc.cpp.o -o ../../bin/test_misc -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 19%] Built target test_misc make -f tests/parse_lm/CMakeFiles/test_parse_lm.dir/build.make tests/parse_lm/CMakeFiles/test_parse_lm.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/parse_lm /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/parse_lm /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/parse_lm/CMakeFiles/test_parse_lm.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/parse_lm/CMakeFiles/test_parse_lm.dir/build.make tests/parse_lm/CMakeFiles/test_parse_lm.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 20%] Building CXX object tests/parse_lm/CMakeFiles/test_parse_lm.dir/test_parse_lm.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/parse_lm && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/parse_lm/CMakeFiles/test_parse_lm.dir/test_parse_lm.cpp.o -MF CMakeFiles/test_parse_lm.dir/test_parse_lm.cpp.o.d -o CMakeFiles/test_parse_lm.dir/test_parse_lm.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/parse_lm/test_parse_lm.cpp make -f tests/pipe/CMakeFiles/test_pipe.dir/build.make tests/pipe/CMakeFiles/test_pipe.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/pipe /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/pipe /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/pipe/CMakeFiles/test_pipe.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/pipe/CMakeFiles/test_pipe.dir/build.make tests/pipe/CMakeFiles/test_pipe.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 20%] Building CXX object tests/pipe/CMakeFiles/test_pipe.dir/test_pipe.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/pipe && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/pipe/CMakeFiles/test_pipe.dir/test_pipe.cpp.o -MF CMakeFiles/test_pipe.dir/test_pipe.cpp.o.d -o CMakeFiles/test_pipe.dir/test_pipe.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/pipe/test_pipe.cpp [ 20%] Linking CXX executable ../../bin/test_index_stree_iterators cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_index_stree_iterators.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_index_stree_iterators.dir/link.d CMakeFiles/test_index_stree_iterators.dir/test_index_stree_iterators.cpp.o -o ../../bin/test_index_stree_iterators -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 20%] Built target test_index_stree_iterators make -f tests/platform/CMakeFiles/test_platform.dir/build.make tests/platform/CMakeFiles/test_platform.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/platform /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/platform /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/platform/CMakeFiles/test_platform.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/platform/CMakeFiles/test_platform.dir/build.make tests/platform/CMakeFiles/test_platform.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 20%] Building CXX object tests/platform/CMakeFiles/test_platform.dir/test_platform.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/platform && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/platform/CMakeFiles/test_platform.dir/test_platform.cpp.o -MF CMakeFiles/test_platform.dir/test_platform.cpp.o.d -o CMakeFiles/test_platform.dir/test_platform.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/platform/test_platform.cpp [ 20%] Linking CXX executable ../../bin/test_modifier cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/modifier && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_modifier.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_modifier.dir/link.d CMakeFiles/test_modifier.dir/test_modifier.cpp.o -o ../../bin/test_modifier -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 20%] Built target test_modifier make -f tests/random/CMakeFiles/test_random.dir/build.make tests/random/CMakeFiles/test_random.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/random /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/random /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/random/CMakeFiles/test_random.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/random/CMakeFiles/test_random.dir/build.make tests/random/CMakeFiles/test_random.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 20%] Building CXX object tests/random/CMakeFiles/test_random.dir/test_random.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/random && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/random/CMakeFiles/test_random.dir/test_random.cpp.o -MF CMakeFiles/test_random.dir/test_random.cpp.o.d -o CMakeFiles/test_random.dir/test_random.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/random/test_random.cpp [ 20%] Linking CXX executable ../../bin/test_multiple_translation_units cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/multiple_translation_units && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_multiple_translation_units.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_multiple_translation_units.dir/link.d CMakeFiles/test_multiple_translation_units.dir/test_multiple_translation_units.cpp.o CMakeFiles/test_multiple_translation_units.dir/test_multiple_translation_units_2.cpp.o -o ../../bin/test_multiple_translation_units -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 20%] Built target test_multiple_translation_units make -f tests/realign/CMakeFiles/test_realign.dir/build.make tests/realign/CMakeFiles/test_realign.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/realign /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/realign /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/realign/CMakeFiles/test_realign.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/realign/CMakeFiles/test_realign.dir/build.make tests/realign/CMakeFiles/test_realign.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 20%] Building CXX object tests/realign/CMakeFiles/test_realign.dir/test_realign.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/realign && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/realign/CMakeFiles/test_realign.dir/test_realign.cpp.o -MF CMakeFiles/test_realign.dir/test_realign.cpp.o.d -o CMakeFiles/test_realign.dir/test_realign.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/realign/test_realign.cpp [ 20%] Linking CXX executable ../../bin/test_platform cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/platform && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_platform.dir/link.txt --verbose=1 [ 20%] Linking CXX executable ../../bin/test_parse_lm cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/parse_lm && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_parse_lm.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_platform.dir/link.d CMakeFiles/test_platform.dir/test_platform.cpp.o -o ../../bin/test_platform -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 20%] Built target test_platform make -f tests/reduced_aminoacid/CMakeFiles/test_reduced_aminoacid.dir/build.make tests/reduced_aminoacid/CMakeFiles/test_reduced_aminoacid.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/reduced_aminoacid /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/reduced_aminoacid /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/reduced_aminoacid/CMakeFiles/test_reduced_aminoacid.dir/DependInfo.cmake "--color=" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_parse_lm.dir/link.d CMakeFiles/test_parse_lm.dir/test_parse_lm.cpp.o -o ../../bin/test_parse_lm -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 20%] Built target test_parse_lm make -f tests/rna_io/CMakeFiles/test_rna_io.dir/build.make tests/rna_io/CMakeFiles/test_rna_io.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/rna_io /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/rna_io /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/rna_io/CMakeFiles/test_rna_io.dir/DependInfo.cmake "--color=" make -f tests/reduced_aminoacid/CMakeFiles/test_reduced_aminoacid.dir/build.make tests/reduced_aminoacid/CMakeFiles/test_reduced_aminoacid.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 20%] Building CXX object tests/reduced_aminoacid/CMakeFiles/test_reduced_aminoacid.dir/test_reduced_aminoacid.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/reduced_aminoacid && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/reduced_aminoacid/CMakeFiles/test_reduced_aminoacid.dir/test_reduced_aminoacid.cpp.o -MF CMakeFiles/test_reduced_aminoacid.dir/test_reduced_aminoacid.cpp.o.d -o CMakeFiles/test_reduced_aminoacid.dir/test_reduced_aminoacid.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/reduced_aminoacid/test_reduced_aminoacid.cpp make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/rna_io/CMakeFiles/test_rna_io.dir/build.make tests/rna_io/CMakeFiles/test_rna_io.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 21%] Building CXX object tests/rna_io/CMakeFiles/test_rna_io.dir/test_rna_io.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/rna_io && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/rna_io/CMakeFiles/test_rna_io.dir/test_rna_io.cpp.o -MF CMakeFiles/test_rna_io.dir/test_rna_io.cpp.o.d -o CMakeFiles/test_rna_io.dir/test_rna_io.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/rna_io/test_rna_io.cpp [ 21%] Linking CXX executable ../../bin/test_parallel cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/parallel && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_parallel.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_parallel.dir/link.d CMakeFiles/test_parallel.dir/test_parallel.cpp.o -o ../../bin/test_parallel -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 21%] Built target test_parallel make -f tests/roi_io/CMakeFiles/test_roi_io.dir/build.make tests/roi_io/CMakeFiles/test_roi_io.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/roi_io /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/roi_io /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/roi_io/CMakeFiles/test_roi_io.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/roi_io/CMakeFiles/test_roi_io.dir/build.make tests/roi_io/CMakeFiles/test_roi_io.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 21%] Building CXX object tests/roi_io/CMakeFiles/test_roi_io.dir/test_roi_io.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/roi_io && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/roi_io/CMakeFiles/test_roi_io.dir/test_roi_io.cpp.o -MF CMakeFiles/test_roi_io.dir/test_roi_io.cpp.o.d -o CMakeFiles/test_roi_io.dir/test_roi_io.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/roi_io/test_roi_io.cpp [ 21%] Linking CXX executable ../../bin/test_index_finder cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_index_finder.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_index_finder.dir/link.d CMakeFiles/test_index_finder.dir/test_index_finder.cpp.o -o ../../bin/test_index_finder -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 21%] Built target test_index_finder make -f tests/score/CMakeFiles/test_score.dir/build.make tests/score/CMakeFiles/test_score.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/score /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/score /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/score/CMakeFiles/test_score.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/score/CMakeFiles/test_score.dir/build.make tests/score/CMakeFiles/test_score.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 21%] Building CXX object tests/score/CMakeFiles/test_score.dir/test_score.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/score && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/score/CMakeFiles/test_score.dir/test_score.cpp.o -MF CMakeFiles/test_score.dir/test_score.cpp.o.d -o CMakeFiles/test_score.dir/test_score.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/score/test_score.cpp [ 21%] Linking CXX executable ../../bin/test_random cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/random && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_random.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_random.dir/link.d CMakeFiles/test_random.dir/test_random.cpp.o -o ../../bin/test_random -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 21%] Built target test_random make -f tests/seeds/CMakeFiles/test_seeds_combination.dir/build.make tests/seeds/CMakeFiles/test_seeds_combination.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/seeds /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds/CMakeFiles/test_seeds_combination.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/seeds/CMakeFiles/test_seeds_combination.dir/build.make tests/seeds/CMakeFiles/test_seeds_combination.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 22%] Building CXX object tests/seeds/CMakeFiles/test_seeds_combination.dir/test_seeds_combination.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/seeds/CMakeFiles/test_seeds_combination.dir/test_seeds_combination.cpp.o -MF CMakeFiles/test_seeds_combination.dir/test_seeds_combination.cpp.o.d -o CMakeFiles/test_seeds_combination.dir/test_seeds_combination.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/seeds/test_seeds_combination.cpp [ 22%] Linking CXX executable ../../bin/test_seeds_combination cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_seeds_combination.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_seeds_combination.dir/link.d CMakeFiles/test_seeds_combination.dir/test_seeds_combination.cpp.o -o ../../bin/test_seeds_combination -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 22%] Built target test_seeds_combination make -f tests/seeds/CMakeFiles/test_seeds_extension.dir/build.make tests/seeds/CMakeFiles/test_seeds_extension.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/seeds /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds/CMakeFiles/test_seeds_extension.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/seeds/CMakeFiles/test_seeds_extension.dir/build.make tests/seeds/CMakeFiles/test_seeds_extension.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 22%] Building CXX object tests/seeds/CMakeFiles/test_seeds_extension.dir/test_seeds_extension.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/seeds/CMakeFiles/test_seeds_extension.dir/test_seeds_extension.cpp.o -MF CMakeFiles/test_seeds_extension.dir/test_seeds_extension.cpp.o.d -o CMakeFiles/test_seeds_extension.dir/test_seeds_extension.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/seeds/test_seeds_extension.cpp [ 22%] Linking CXX executable ../../bin/test_pipe cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/pipe && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_pipe.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_pipe.dir/link.d CMakeFiles/test_pipe.dir/test_pipe.cpp.o -o ../../bin/test_pipe -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 22%] Built target test_pipe make -f tests/seeds/CMakeFiles/test_seeds_global_chaining.dir/build.make tests/seeds/CMakeFiles/test_seeds_global_chaining.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/seeds /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds/CMakeFiles/test_seeds_global_chaining.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/seeds/CMakeFiles/test_seeds_global_chaining.dir/build.make tests/seeds/CMakeFiles/test_seeds_global_chaining.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 22%] Building CXX object tests/seeds/CMakeFiles/test_seeds_global_chaining.dir/test_seeds_global_chaining.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/seeds/CMakeFiles/test_seeds_global_chaining.dir/test_seeds_global_chaining.cpp.o -MF CMakeFiles/test_seeds_global_chaining.dir/test_seeds_global_chaining.cpp.o.d -o CMakeFiles/test_seeds_global_chaining.dir/test_seeds_global_chaining.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/seeds/test_seeds_global_chaining.cpp [ 22%] Linking CXX executable ../../bin/test_score cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/score && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_score.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_score.dir/link.d CMakeFiles/test_score.dir/test_score.cpp.o -o ../../bin/test_score -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 22%] Built target test_score make -f tests/seeds/CMakeFiles/test_seeds_seed_base.dir/build.make tests/seeds/CMakeFiles/test_seeds_seed_base.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/seeds /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds/CMakeFiles/test_seeds_seed_base.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/seeds/CMakeFiles/test_seeds_seed_base.dir/build.make tests/seeds/CMakeFiles/test_seeds_seed_base.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 22%] Building CXX object tests/seeds/CMakeFiles/test_seeds_seed_base.dir/test_seeds_seed_base.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/seeds/CMakeFiles/test_seeds_seed_base.dir/test_seeds_seed_base.cpp.o -MF CMakeFiles/test_seeds_seed_base.dir/test_seeds_seed_base.cpp.o.d -o CMakeFiles/test_seeds_seed_base.dir/test_seeds_seed_base.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/seeds/test_seeds_seed_base.cpp [ 22%] Linking CXX executable ../../bin/test_roi_io cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/roi_io && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_roi_io.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_roi_io.dir/link.d CMakeFiles/test_roi_io.dir/test_roi_io.cpp.o -o ../../bin/test_roi_io -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 22%] Built target test_roi_io make -f tests/seeds/CMakeFiles/test_seeds_seed_chained.dir/build.make tests/seeds/CMakeFiles/test_seeds_seed_chained.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/seeds /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds/CMakeFiles/test_seeds_seed_chained.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/seeds/CMakeFiles/test_seeds_seed_chained.dir/build.make tests/seeds/CMakeFiles/test_seeds_seed_chained.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 22%] Building CXX object tests/seeds/CMakeFiles/test_seeds_seed_chained.dir/test_seeds_seed_chained.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/seeds/CMakeFiles/test_seeds_seed_chained.dir/test_seeds_seed_chained.cpp.o -MF CMakeFiles/test_seeds_seed_chained.dir/test_seeds_seed_chained.cpp.o.d -o CMakeFiles/test_seeds_seed_chained.dir/test_seeds_seed_chained.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/seeds/test_seeds_seed_chained.cpp [ 22%] Linking CXX executable ../../bin/test_seeds_seed_base cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_seeds_seed_base.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_seeds_seed_base.dir/link.d CMakeFiles/test_seeds_seed_base.dir/test_seeds_seed_base.cpp.o -o ../../bin/test_seeds_seed_base -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 22%] Built target test_seeds_seed_base make -f tests/seeds/CMakeFiles/test_seeds_seed_diagonal.dir/build.make tests/seeds/CMakeFiles/test_seeds_seed_diagonal.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/seeds /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds/CMakeFiles/test_seeds_seed_diagonal.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/seeds/CMakeFiles/test_seeds_seed_diagonal.dir/build.make tests/seeds/CMakeFiles/test_seeds_seed_diagonal.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 22%] Building CXX object tests/seeds/CMakeFiles/test_seeds_seed_diagonal.dir/test_seeds_seed_diagonal.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/seeds/CMakeFiles/test_seeds_seed_diagonal.dir/test_seeds_seed_diagonal.cpp.o -MF CMakeFiles/test_seeds_seed_diagonal.dir/test_seeds_seed_diagonal.cpp.o.d -o CMakeFiles/test_seeds_seed_diagonal.dir/test_seeds_seed_diagonal.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/seeds/test_seeds_seed_diagonal.cpp [ 22%] Linking CXX executable ../../bin/test_seeds_global_chaining cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_seeds_global_chaining.dir/link.txt --verbose=1 [ 22%] Linking CXX executable ../../bin/test_seeds_extension cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_seeds_extension.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_seeds_global_chaining.dir/link.d CMakeFiles/test_seeds_global_chaining.dir/test_seeds_global_chaining.cpp.o -o ../../bin/test_seeds_global_chaining -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_seeds_extension.dir/link.d CMakeFiles/test_seeds_extension.dir/test_seeds_extension.cpp.o -o ../../bin/test_seeds_extension -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 22%] Built target test_seeds_global_chaining make -f tests/seeds/CMakeFiles/test_seeds_seed_set_base.dir/build.make tests/seeds/CMakeFiles/test_seeds_seed_set_base.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/seeds /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds/CMakeFiles/test_seeds_seed_set_base.dir/DependInfo.cmake "--color=" [ 22%] Built target test_seeds_extension make -f tests/seeds/CMakeFiles/test_seeds_seed_set_unordered.dir/build.make tests/seeds/CMakeFiles/test_seeds_seed_set_unordered.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/seeds /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds/CMakeFiles/test_seeds_seed_set_unordered.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/seeds/CMakeFiles/test_seeds_seed_set_base.dir/build.make tests/seeds/CMakeFiles/test_seeds_seed_set_base.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/seeds/CMakeFiles/test_seeds_seed_set_unordered.dir/build.make tests/seeds/CMakeFiles/test_seeds_seed_set_unordered.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 22%] Building CXX object tests/seeds/CMakeFiles/test_seeds_seed_set_base.dir/test_seeds_seed_set_base.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/seeds/CMakeFiles/test_seeds_seed_set_base.dir/test_seeds_seed_set_base.cpp.o -MF CMakeFiles/test_seeds_seed_set_base.dir/test_seeds_seed_set_base.cpp.o.d -o CMakeFiles/test_seeds_seed_set_base.dir/test_seeds_seed_set_base.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/seeds/test_seeds_seed_set_base.cpp [ 22%] Building CXX object tests/seeds/CMakeFiles/test_seeds_seed_set_unordered.dir/test_seeds_seed_set_unordered.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/seeds/CMakeFiles/test_seeds_seed_set_unordered.dir/test_seeds_seed_set_unordered.cpp.o -MF CMakeFiles/test_seeds_seed_set_unordered.dir/test_seeds_seed_set_unordered.cpp.o.d -o CMakeFiles/test_seeds_seed_set_unordered.dir/test_seeds_seed_set_unordered.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/seeds/test_seeds_seed_set_unordered.cpp [ 22%] Linking CXX executable ../../bin/test_seeds_seed_chained cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_seeds_seed_chained.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_seeds_seed_chained.dir/link.d CMakeFiles/test_seeds_seed_chained.dir/test_seeds_seed_chained.cpp.o -o ../../bin/test_seeds_seed_chained -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 22%] Built target test_seeds_seed_chained make -f tests/seeds/CMakeFiles/test_seeds_align_banded_chain_impl.dir/build.make tests/seeds/CMakeFiles/test_seeds_align_banded_chain_impl.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/seeds /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds/CMakeFiles/test_seeds_align_banded_chain_impl.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/seeds/CMakeFiles/test_seeds_align_banded_chain_impl.dir/build.make tests/seeds/CMakeFiles/test_seeds_align_banded_chain_impl.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 22%] Building CXX object tests/seeds/CMakeFiles/test_seeds_align_banded_chain_impl.dir/test_align_banded_chain_impl.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/seeds/CMakeFiles/test_seeds_align_banded_chain_impl.dir/test_align_banded_chain_impl.cpp.o -MF CMakeFiles/test_seeds_align_banded_chain_impl.dir/test_align_banded_chain_impl.cpp.o.d -o CMakeFiles/test_seeds_align_banded_chain_impl.dir/test_align_banded_chain_impl.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/seeds/test_align_banded_chain_impl.cpp [ 22%] Linking CXX executable ../../bin/test_seeds_seed_diagonal cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_seeds_seed_diagonal.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_seeds_seed_diagonal.dir/link.d CMakeFiles/test_seeds_seed_diagonal.dir/test_seeds_seed_diagonal.cpp.o -o ../../bin/test_seeds_seed_diagonal -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 22%] Built target test_seeds_seed_diagonal make -f tests/seeds/CMakeFiles/test_seeds_banded_chain_alignment_interface.dir/build.make tests/seeds/CMakeFiles/test_seeds_banded_chain_alignment_interface.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/seeds /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds/CMakeFiles/test_seeds_banded_chain_alignment_interface.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/seeds/CMakeFiles/test_seeds_banded_chain_alignment_interface.dir/build.make tests/seeds/CMakeFiles/test_seeds_banded_chain_alignment_interface.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 22%] Building CXX object tests/seeds/CMakeFiles/test_seeds_banded_chain_alignment_interface.dir/test_banded_chain_alignment_interface.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/seeds/CMakeFiles/test_seeds_banded_chain_alignment_interface.dir/test_banded_chain_alignment_interface.cpp.o -MF CMakeFiles/test_seeds_banded_chain_alignment_interface.dir/test_banded_chain_alignment_interface.cpp.o.d -o CMakeFiles/test_seeds_banded_chain_alignment_interface.dir/test_banded_chain_alignment_interface.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/seeds/test_banded_chain_alignment_interface.cpp [ 22%] Linking CXX executable ../../bin/test_seeds_seed_set_unordered cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_seeds_seed_set_unordered.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_seeds_seed_set_unordered.dir/link.d CMakeFiles/test_seeds_seed_set_unordered.dir/test_seeds_seed_set_unordered.cpp.o -o ../../bin/test_seeds_seed_set_unordered -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 22%] Built target test_seeds_seed_set_unordered make -f tests/seeds/CMakeFiles/test_seeds_align_banded_chain_issue_2540.dir/build.make tests/seeds/CMakeFiles/test_seeds_align_banded_chain_issue_2540.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/seeds /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds/CMakeFiles/test_seeds_align_banded_chain_issue_2540.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/seeds/CMakeFiles/test_seeds_align_banded_chain_issue_2540.dir/build.make tests/seeds/CMakeFiles/test_seeds_align_banded_chain_issue_2540.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 22%] Building CXX object tests/seeds/CMakeFiles/test_seeds_align_banded_chain_issue_2540.dir/test_align_banded_chain_issue_2540.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/seeds/CMakeFiles/test_seeds_align_banded_chain_issue_2540.dir/test_align_banded_chain_issue_2540.cpp.o -MF CMakeFiles/test_seeds_align_banded_chain_issue_2540.dir/test_align_banded_chain_issue_2540.cpp.o.d -o CMakeFiles/test_seeds_align_banded_chain_issue_2540.dir/test_align_banded_chain_issue_2540.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/seeds/test_align_banded_chain_issue_2540.cpp [ 22%] Linking CXX executable ../../bin/test_realign cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/realign && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_realign.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_realign.dir/link.d CMakeFiles/test_realign.dir/test_realign.cpp.o -o ../../bin/test_realign -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 22%] Built target test_realign make -f tests/seq_io/CMakeFiles/test_seq_io.dir/build.make tests/seq_io/CMakeFiles/test_seq_io.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/seq_io /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seq_io /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seq_io/CMakeFiles/test_seq_io.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/seq_io/CMakeFiles/test_seq_io.dir/build.make tests/seq_io/CMakeFiles/test_seq_io.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 22%] Building CXX object tests/seq_io/CMakeFiles/test_seq_io.dir/test_seq_io.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seq_io && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/seq_io/CMakeFiles/test_seq_io.dir/test_seq_io.cpp.o -MF CMakeFiles/test_seq_io.dir/test_seq_io.cpp.o.d -o CMakeFiles/test_seq_io.dir/test_seq_io.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/seq_io/test_seq_io.cpp [ 23%] Linking CXX executable ../../bin/test_seeds_seed_set_base cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_seeds_seed_set_base.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_seeds_seed_set_base.dir/link.d CMakeFiles/test_seeds_seed_set_base.dir/test_seeds_seed_set_base.cpp.o -o ../../bin/test_seeds_seed_set_base -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 23%] Built target test_seeds_seed_set_base make -f tests/sequence/CMakeFiles/test_sequence.dir/build.make tests/sequence/CMakeFiles/test_sequence.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/sequence /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/sequence /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/sequence/CMakeFiles/test_sequence.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/sequence/CMakeFiles/test_sequence.dir/build.make tests/sequence/CMakeFiles/test_sequence.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 23%] Building CXX object tests/sequence/CMakeFiles/test_sequence.dir/test_sequence.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/sequence && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/sequence/CMakeFiles/test_sequence.dir/test_sequence.cpp.o -MF CMakeFiles/test_sequence.dir/test_sequence.cpp.o.d -o CMakeFiles/test_sequence.dir/test_sequence.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/sequence/test_sequence.cpp [ 23%] Linking CXX executable ../../bin/test_rna_io cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/rna_io && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_rna_io.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_rna_io.dir/link.d CMakeFiles/test_rna_io.dir/test_rna_io.cpp.o -o ../../bin/test_rna_io -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 23%] Built target test_rna_io make -f tests/sequence/CMakeFiles/test_sequence_v2.dir/build.make tests/sequence/CMakeFiles/test_sequence_v2.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/sequence /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/sequence /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/sequence/CMakeFiles/test_sequence_v2.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/sequence/CMakeFiles/test_sequence_v2.dir/build.make tests/sequence/CMakeFiles/test_sequence_v2.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 23%] Building CXX object tests/sequence/CMakeFiles/test_sequence_v2.dir/test_sequence_v2.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/sequence && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/sequence/CMakeFiles/test_sequence_v2.dir/test_sequence_v2.cpp.o -MF CMakeFiles/test_sequence_v2.dir/test_sequence_v2.cpp.o.d -o CMakeFiles/test_sequence_v2.dir/test_sequence_v2.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/sequence/test_sequence_v2.cpp [ 23%] Linking CXX executable ../../bin/test_reduced_aminoacid cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/reduced_aminoacid && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_reduced_aminoacid.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_reduced_aminoacid.dir/link.d CMakeFiles/test_reduced_aminoacid.dir/test_reduced_aminoacid.cpp.o -o ../../bin/test_reduced_aminoacid -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 23%] Built target test_reduced_aminoacid make -f tests/sequence/CMakeFiles/test_stringset_v2.dir/build.make tests/sequence/CMakeFiles/test_stringset_v2.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/sequence /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/sequence /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/sequence/CMakeFiles/test_stringset_v2.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/sequence/CMakeFiles/test_stringset_v2.dir/build.make tests/sequence/CMakeFiles/test_stringset_v2.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 23%] Building CXX object tests/sequence/CMakeFiles/test_stringset_v2.dir/test_stringset_v2.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/sequence && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/sequence/CMakeFiles/test_stringset_v2.dir/test_stringset_v2.cpp.o -MF CMakeFiles/test_stringset_v2.dir/test_stringset_v2.cpp.o.d -o CMakeFiles/test_stringset_v2.dir/test_stringset_v2.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/sequence/test_stringset_v2.cpp [ 23%] Linking CXX executable ../../bin/test_seeds_align_banded_chain_issue_2540 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_seeds_align_banded_chain_issue_2540.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_seeds_align_banded_chain_issue_2540.dir/link.d CMakeFiles/test_seeds_align_banded_chain_issue_2540.dir/test_align_banded_chain_issue_2540.cpp.o -o ../../bin/test_seeds_align_banded_chain_issue_2540 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 23%] Built target test_seeds_align_banded_chain_issue_2540 make -f tests/sequence_journaled/CMakeFiles/test_sequence_journaled.dir/build.make tests/sequence_journaled/CMakeFiles/test_sequence_journaled.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/sequence_journaled /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/sequence_journaled /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/sequence_journaled/CMakeFiles/test_sequence_journaled.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/sequence_journaled/CMakeFiles/test_sequence_journaled.dir/build.make tests/sequence_journaled/CMakeFiles/test_sequence_journaled.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 23%] Building CXX object tests/sequence_journaled/CMakeFiles/test_sequence_journaled.dir/test_sequence_journaled.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/sequence_journaled && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/sequence_journaled/CMakeFiles/test_sequence_journaled.dir/test_sequence_journaled.cpp.o -MF CMakeFiles/test_sequence_journaled.dir/test_sequence_journaled.cpp.o.d -o CMakeFiles/test_sequence_journaled.dir/test_sequence_journaled.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/sequence_journaled/test_sequence_journaled.cpp [ 23%] Linking CXX executable ../../bin/test_seq_io cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seq_io && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_seq_io.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_seq_io.dir/link.d CMakeFiles/test_seq_io.dir/test_seq_io.cpp.o -o ../../bin/test_seq_io -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 23%] Built target test_seq_io make -f tests/simd/CMakeFiles/test_simd_vector.dir/build.make tests/simd/CMakeFiles/test_simd_vector.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/simd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/simd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/simd/CMakeFiles/test_simd_vector.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/simd/CMakeFiles/test_simd_vector.dir/build.make tests/simd/CMakeFiles/test_simd_vector.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 23%] Building CXX object tests/simd/CMakeFiles/test_simd_vector.dir/test_simd_vector.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/simd && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/simd/CMakeFiles/test_simd_vector.dir/test_simd_vector.cpp.o -MF CMakeFiles/test_simd_vector.dir/test_simd_vector.cpp.o.d -o CMakeFiles/test_simd_vector.dir/test_simd_vector.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/simd/test_simd_vector.cpp [ 24%] Linking CXX executable ../../bin/test_simd_vector cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/simd && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_simd_vector.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_simd_vector.dir/link.d CMakeFiles/test_simd_vector.dir/test_simd_vector.cpp.o -o ../../bin/test_simd_vector -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 24%] Built target test_simd_vector make -f tests/simple_intervals_io/CMakeFiles/test_simple_intervals_io.dir/build.make tests/simple_intervals_io/CMakeFiles/test_simple_intervals_io.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/simple_intervals_io /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/simple_intervals_io /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/simple_intervals_io/CMakeFiles/test_simple_intervals_io.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/simple_intervals_io/CMakeFiles/test_simple_intervals_io.dir/build.make tests/simple_intervals_io/CMakeFiles/test_simple_intervals_io.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 24%] Building CXX object tests/simple_intervals_io/CMakeFiles/test_simple_intervals_io.dir/test_simple_intervals_io.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/simple_intervals_io && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/simple_intervals_io/CMakeFiles/test_simple_intervals_io.dir/test_simple_intervals_io.cpp.o -MF CMakeFiles/test_simple_intervals_io.dir/test_simple_intervals_io.cpp.o.d -o CMakeFiles/test_simple_intervals_io.dir/test_simple_intervals_io.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/simple_intervals_io/test_simple_intervals_io.cpp [ 24%] Linking CXX executable ../../bin/test_sequence cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/sequence && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sequence.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_sequence.dir/link.d CMakeFiles/test_sequence.dir/test_sequence.cpp.o -o ../../bin/test_sequence -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 24%] Built target test_sequence make -f tests/statistics/CMakeFiles/test_statistics.dir/build.make tests/statistics/CMakeFiles/test_statistics.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/statistics /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/statistics /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/statistics/CMakeFiles/test_statistics.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/statistics/CMakeFiles/test_statistics.dir/build.make tests/statistics/CMakeFiles/test_statistics.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 24%] Building CXX object tests/statistics/CMakeFiles/test_statistics.dir/test_statistics.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/statistics && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/statistics/CMakeFiles/test_statistics.dir/test_statistics.cpp.o -MF CMakeFiles/test_statistics.dir/test_statistics.cpp.o.d -o CMakeFiles/test_statistics.dir/test_statistics.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/statistics/test_statistics.cpp [ 24%] Linking CXX executable ../../bin/test_sequence_journaled cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/sequence_journaled && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sequence_journaled.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_sequence_journaled.dir/link.d CMakeFiles/test_sequence_journaled.dir/test_sequence_journaled.cpp.o -o ../../bin/test_sequence_journaled -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 24%] Built target test_sequence_journaled make -f tests/store/CMakeFiles/test_store.dir/build.make tests/store/CMakeFiles/test_store.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/store /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/store /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/store/CMakeFiles/test_store.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/store/CMakeFiles/test_store.dir/build.make tests/store/CMakeFiles/test_store.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 24%] Building CXX object tests/store/CMakeFiles/test_store.dir/test_store.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/store && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/store/CMakeFiles/test_store.dir/test_store.cpp.o -MF CMakeFiles/test_store.dir/test_store.cpp.o.d -o CMakeFiles/test_store.dir/test_store.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/store/test_store.cpp [ 24%] Linking CXX executable ../../bin/test_simple_intervals_io cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/simple_intervals_io && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_simple_intervals_io.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_simple_intervals_io.dir/link.d CMakeFiles/test_simple_intervals_io.dir/test_simple_intervals_io.cpp.o -o ../../bin/test_simple_intervals_io -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 24%] Built target test_simple_intervals_io make -f tests/stream/CMakeFiles/test_stream.dir/build.make tests/stream/CMakeFiles/test_stream.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/stream /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/stream /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/stream/CMakeFiles/test_stream.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/stream/CMakeFiles/test_stream.dir/build.make tests/stream/CMakeFiles/test_stream.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 24%] Building CXX object tests/stream/CMakeFiles/test_stream.dir/test_stream.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/stream && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/stream/CMakeFiles/test_stream.dir/test_stream.cpp.o -MF CMakeFiles/test_stream.dir/test_stream.cpp.o.d -o CMakeFiles/test_stream.dir/test_stream.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/stream/test_stream.cpp [ 24%] Linking CXX executable ../../bin/test_statistics cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/statistics && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_statistics.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_statistics.dir/link.d CMakeFiles/test_statistics.dir/test_statistics.cpp.o -o ../../bin/test_statistics -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 24%] Built target test_statistics make -f tests/swift_local/CMakeFiles/test_find_swift.dir/build.make tests/swift_local/CMakeFiles/test_find_swift.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/swift_local /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/swift_local /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/swift_local/CMakeFiles/test_find_swift.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/swift_local/CMakeFiles/test_find_swift.dir/build.make tests/swift_local/CMakeFiles/test_find_swift.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 24%] Building CXX object tests/swift_local/CMakeFiles/test_find_swift.dir/test_find_swift.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/swift_local && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/swift_local/CMakeFiles/test_find_swift.dir/test_find_swift.cpp.o -MF CMakeFiles/test_find_swift.dir/test_find_swift.cpp.o.d -o CMakeFiles/test_find_swift.dir/test_find_swift.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/swift_local/test_find_swift.cpp [ 24%] Linking CXX executable ../../bin/test_find_swift cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/swift_local && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_find_swift.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_find_swift.dir/link.d CMakeFiles/test_find_swift.dir/test_find_swift.cpp.o -o ../../bin/test_find_swift -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 24%] Built target test_find_swift make -f tests/tabix_io/CMakeFiles/test_tabix_io.dir/build.make tests/tabix_io/CMakeFiles/test_tabix_io.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/tabix_io /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/tabix_io /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/tabix_io/CMakeFiles/test_tabix_io.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/tabix_io/CMakeFiles/test_tabix_io.dir/build.make tests/tabix_io/CMakeFiles/test_tabix_io.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 24%] Building CXX object tests/tabix_io/CMakeFiles/test_tabix_io.dir/test_tabix_io.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/tabix_io && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/tabix_io/CMakeFiles/test_tabix_io.dir/test_tabix_io.cpp.o -MF CMakeFiles/test_tabix_io.dir/test_tabix_io.cpp.o.d -o CMakeFiles/test_tabix_io.dir/test_tabix_io.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/tabix_io/test_tabix_io.cpp [ 24%] Linking CXX executable ../../bin/test_stream cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/stream && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_stream.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_stream.dir/link.d CMakeFiles/test_stream.dir/test_stream.cpp.o -o ../../bin/test_stream -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 24%] Built target test_stream make -f tests/translation/CMakeFiles/test_translation.dir/build.make tests/translation/CMakeFiles/test_translation.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/translation /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/translation /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/translation/CMakeFiles/test_translation.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/translation/CMakeFiles/test_translation.dir/build.make tests/translation/CMakeFiles/test_translation.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 24%] Building CXX object tests/translation/CMakeFiles/test_translation.dir/test_translation.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/translation && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/translation/CMakeFiles/test_translation.dir/test_translation.cpp.o -MF CMakeFiles/test_translation.dir/test_translation.cpp.o.d -o CMakeFiles/test_translation.dir/test_translation.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/translation/test_translation.cpp [ 25%] Linking CXX executable ../../bin/test_tabix_io cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/tabix_io && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_tabix_io.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_tabix_io.dir/link.d CMakeFiles/test_tabix_io.dir/test_tabix_io.cpp.o -o ../../bin/test_tabix_io -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 25%] Built target test_tabix_io make -f tests/ucsc_io/CMakeFiles/test_ucsc_io.dir/build.make tests/ucsc_io/CMakeFiles/test_ucsc_io.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/ucsc_io /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/ucsc_io /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/ucsc_io/CMakeFiles/test_ucsc_io.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/ucsc_io/CMakeFiles/test_ucsc_io.dir/build.make tests/ucsc_io/CMakeFiles/test_ucsc_io.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 25%] Building CXX object tests/ucsc_io/CMakeFiles/test_ucsc_io.dir/test_ucsc_io.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/ucsc_io && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/ucsc_io/CMakeFiles/test_ucsc_io.dir/test_ucsc_io.cpp.o -MF CMakeFiles/test_ucsc_io.dir/test_ucsc_io.cpp.o.d -o CMakeFiles/test_ucsc_io.dir/test_ucsc_io.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/ucsc_io/test_ucsc_io.cpp [ 25%] Linking CXX executable ../../bin/test_ucsc_io cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/ucsc_io && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_ucsc_io.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_ucsc_io.dir/link.d CMakeFiles/test_ucsc_io.dir/test_ucsc_io.cpp.o -o ../../bin/test_ucsc_io -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 25%] Built target test_ucsc_io make -f tests/vcf_io/CMakeFiles/test_vcf_io.dir/build.make tests/vcf_io/CMakeFiles/test_vcf_io.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/tests/vcf_io /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/vcf_io /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/vcf_io/CMakeFiles/test_vcf_io.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f tests/vcf_io/CMakeFiles/test_vcf_io.dir/build.make tests/vcf_io/CMakeFiles/test_vcf_io.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 25%] Building CXX object tests/vcf_io/CMakeFiles/test_vcf_io.dir/test_vcf_io.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/vcf_io && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_ENABLE_TESTING=1 -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT tests/vcf_io/CMakeFiles/test_vcf_io.dir/test_vcf_io.cpp.o -MF CMakeFiles/test_vcf_io.dir/test_vcf_io.cpp.o.d -o CMakeFiles/test_vcf_io.dir/test_vcf_io.cpp.o -c /build/reproducible-path/seqan2-2.5.2/tests/vcf_io/test_vcf_io.cpp [ 25%] Linking CXX executable ../../bin/test_store cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/store && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_store.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_store.dir/link.d CMakeFiles/test_store.dir/test_store.cpp.o -o ../../bin/test_store -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 25%] Built target test_store make -f demos/CMakeFiles/demo_blast_blast_in_lowlevel.dir/build.make demos/CMakeFiles/demo_blast_blast_in_lowlevel.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_blast_blast_in_lowlevel.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_blast_blast_in_lowlevel.dir/build.make demos/CMakeFiles/demo_blast_blast_in_lowlevel.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 25%] Building CXX object demos/CMakeFiles/demo_blast_blast_in_lowlevel.dir/blast/blast_in_lowlevel.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_blast_blast_in_lowlevel.dir/blast/blast_in_lowlevel.cpp.o -MF CMakeFiles/demo_blast_blast_in_lowlevel.dir/blast/blast_in_lowlevel.cpp.o.d -o CMakeFiles/demo_blast_blast_in_lowlevel.dir/blast/blast_in_lowlevel.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/blast/blast_in_lowlevel.cpp [ 26%] Linking CXX executable ../bin/demo_blast_blast_in_lowlevel cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_blast_blast_in_lowlevel.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_blast_blast_in_lowlevel.dir/link.d CMakeFiles/demo_blast_blast_in_lowlevel.dir/blast/blast_in_lowlevel.cpp.o -o ../bin/demo_blast_blast_in_lowlevel -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 26%] Built target demo_blast_blast_in_lowlevel make -f demos/CMakeFiles/demo_dox_align_align.dir/build.make demos/CMakeFiles/demo_dox_align_align.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_align_align.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_align_align.dir/build.make demos/CMakeFiles/demo_dox_align_align.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 26%] Building CXX object demos/CMakeFiles/demo_dox_align_align.dir/dox/align/align.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_align_align.dir/dox/align/align.cpp.o -MF CMakeFiles/demo_dox_align_align.dir/dox/align/align.cpp.o.d -o CMakeFiles/demo_dox_align_align.dir/dox/align/align.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/align/align.cpp [ 26%] Linking CXX executable ../../bin/test_translation cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/translation && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_translation.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_translation.dir/link.d CMakeFiles/test_translation.dir/test_translation.cpp.o -o ../../bin/test_translation -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 26%] Built target test_translation make -f demos/CMakeFiles/demo_dox_align_compute_alignment_stats.dir/build.make demos/CMakeFiles/demo_dox_align_compute_alignment_stats.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_align_compute_alignment_stats.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_align_compute_alignment_stats.dir/build.make demos/CMakeFiles/demo_dox_align_compute_alignment_stats.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 26%] Building CXX object demos/CMakeFiles/demo_dox_align_compute_alignment_stats.dir/dox/align/compute_alignment_stats.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_align_compute_alignment_stats.dir/dox/align/compute_alignment_stats.cpp.o -MF CMakeFiles/demo_dox_align_compute_alignment_stats.dir/dox/align/compute_alignment_stats.cpp.o.d -o CMakeFiles/demo_dox_align_compute_alignment_stats.dir/dox/align/compute_alignment_stats.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/align/compute_alignment_stats.cpp [ 26%] Linking CXX executable ../bin/demo_dox_align_align cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_align_align.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_align_align.dir/link.d CMakeFiles/demo_dox_align_align.dir/dox/align/align.cpp.o -o ../bin/demo_dox_align_align -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 26%] Built target demo_dox_align_align make -f demos/CMakeFiles/demo_dox_align_gaps_example.dir/build.make demos/CMakeFiles/demo_dox_align_gaps_example.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_align_gaps_example.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_align_gaps_example.dir/build.make demos/CMakeFiles/demo_dox_align_gaps_example.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 26%] Building CXX object demos/CMakeFiles/demo_dox_align_gaps_example.dir/dox/align/gaps_example.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_align_gaps_example.dir/dox/align/gaps_example.cpp.o -MF CMakeFiles/demo_dox_align_gaps_example.dir/dox/align/gaps_example.cpp.o.d -o CMakeFiles/demo_dox_align_gaps_example.dir/dox/align/gaps_example.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/align/gaps_example.cpp [ 26%] Linking CXX executable ../bin/demo_dox_align_compute_alignment_stats cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_align_compute_alignment_stats.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_align_compute_alignment_stats.dir/link.d CMakeFiles/demo_dox_align_compute_alignment_stats.dir/dox/align/compute_alignment_stats.cpp.o -o ../bin/demo_dox_align_compute_alignment_stats -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 26%] Built target demo_dox_align_compute_alignment_stats make -f demos/CMakeFiles/demo_dox_align_global_alignment_banded.dir/build.make demos/CMakeFiles/demo_dox_align_global_alignment_banded.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_align_global_alignment_banded.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_align_global_alignment_banded.dir/build.make demos/CMakeFiles/demo_dox_align_global_alignment_banded.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 26%] Building CXX object demos/CMakeFiles/demo_dox_align_global_alignment_banded.dir/dox/align/global_alignment_banded.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_align_global_alignment_banded.dir/dox/align/global_alignment_banded.cpp.o -MF CMakeFiles/demo_dox_align_global_alignment_banded.dir/dox/align/global_alignment_banded.cpp.o.d -o CMakeFiles/demo_dox_align_global_alignment_banded.dir/dox/align/global_alignment_banded.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/align/global_alignment_banded.cpp [ 26%] Linking CXX executable ../../bin/test_stringset_v2 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/sequence && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_stringset_v2.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_stringset_v2.dir/link.d CMakeFiles/test_stringset_v2.dir/test_stringset_v2.cpp.o -o ../../bin/test_stringset_v2 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 26%] Built target test_stringset_v2 make -f demos/CMakeFiles/demo_dox_align_global_alignment_unbanded.dir/build.make demos/CMakeFiles/demo_dox_align_global_alignment_unbanded.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_align_global_alignment_unbanded.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_align_global_alignment_unbanded.dir/build.make demos/CMakeFiles/demo_dox_align_global_alignment_unbanded.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 26%] Building CXX object demos/CMakeFiles/demo_dox_align_global_alignment_unbanded.dir/dox/align/global_alignment_unbanded.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_align_global_alignment_unbanded.dir/dox/align/global_alignment_unbanded.cpp.o -MF CMakeFiles/demo_dox_align_global_alignment_unbanded.dir/dox/align/global_alignment_unbanded.cpp.o.d -o CMakeFiles/demo_dox_align_global_alignment_unbanded.dir/dox/align/global_alignment_unbanded.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/align/global_alignment_unbanded.cpp [ 26%] Linking CXX executable ../../bin/test_vcf_io cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/vcf_io && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_vcf_io.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_vcf_io.dir/link.d CMakeFiles/test_vcf_io.dir/test_vcf_io.cpp.o -o ../../bin/test_vcf_io -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 26%] Built target test_vcf_io make -f demos/CMakeFiles/demo_dox_align_global_alignment_unbanded_execution_policy.dir/build.make demos/CMakeFiles/demo_dox_align_global_alignment_unbanded_execution_policy.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_align_global_alignment_unbanded_execution_policy.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_align_global_alignment_unbanded_execution_policy.dir/build.make demos/CMakeFiles/demo_dox_align_global_alignment_unbanded_execution_policy.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 26%] Building CXX object demos/CMakeFiles/demo_dox_align_global_alignment_unbanded_execution_policy.dir/dox/align/global_alignment_unbanded_execution_policy.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_align_global_alignment_unbanded_execution_policy.dir/dox/align/global_alignment_unbanded_execution_policy.cpp.o -MF CMakeFiles/demo_dox_align_global_alignment_unbanded_execution_policy.dir/dox/align/global_alignment_unbanded_execution_policy.cpp.o.d -o CMakeFiles/demo_dox_align_global_alignment_unbanded_execution_policy.dir/dox/align/global_alignment_unbanded_execution_policy.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/align/global_alignment_unbanded_execution_policy.cpp [ 26%] Linking CXX executable ../bin/demo_dox_align_gaps_example cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_align_gaps_example.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_align_gaps_example.dir/link.d CMakeFiles/demo_dox_align_gaps_example.dir/dox/align/gaps_example.cpp.o -o ../bin/demo_dox_align_gaps_example -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 26%] Built target demo_dox_align_gaps_example make -f demos/CMakeFiles/demo_dox_align_global_alignment_unbanded_score_execution_policy_parallel.dir/build.make demos/CMakeFiles/demo_dox_align_global_alignment_unbanded_score_execution_policy_parallel.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_align_global_alignment_unbanded_score_execution_policy_parallel.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_align_global_alignment_unbanded_score_execution_policy_parallel.dir/build.make demos/CMakeFiles/demo_dox_align_global_alignment_unbanded_score_execution_policy_parallel.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 26%] Building CXX object demos/CMakeFiles/demo_dox_align_global_alignment_unbanded_score_execution_policy_parallel.dir/dox/align/global_alignment_unbanded_score_execution_policy_parallel.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_align_global_alignment_unbanded_score_execution_policy_parallel.dir/dox/align/global_alignment_unbanded_score_execution_policy_parallel.cpp.o -MF CMakeFiles/demo_dox_align_global_alignment_unbanded_score_execution_policy_parallel.dir/dox/align/global_alignment_unbanded_score_execution_policy_parallel.cpp.o.d -o CMakeFiles/demo_dox_align_global_alignment_unbanded_score_execution_policy_parallel.dir/dox/align/global_alignment_unbanded_score_execution_policy_parallel.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/align/global_alignment_unbanded_score_execution_policy_parallel.cpp [ 26%] Linking CXX executable ../../bin/test_seeds_align_banded_chain_impl cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_seeds_align_banded_chain_impl.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_seeds_align_banded_chain_impl.dir/link.d CMakeFiles/test_seeds_align_banded_chain_impl.dir/test_align_banded_chain_impl.cpp.o -o ../../bin/test_seeds_align_banded_chain_impl -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 26%] Built target test_seeds_align_banded_chain_impl make -f demos/CMakeFiles/demo_dox_align_global_alignment_unbanded_score_execution_policy_wavefront.dir/build.make demos/CMakeFiles/demo_dox_align_global_alignment_unbanded_score_execution_policy_wavefront.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_align_global_alignment_unbanded_score_execution_policy_wavefront.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_align_global_alignment_unbanded_score_execution_policy_wavefront.dir/build.make demos/CMakeFiles/demo_dox_align_global_alignment_unbanded_score_execution_policy_wavefront.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 26%] Building CXX object demos/CMakeFiles/demo_dox_align_global_alignment_unbanded_score_execution_policy_wavefront.dir/dox/align/global_alignment_unbanded_score_execution_policy_wavefront.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_align_global_alignment_unbanded_score_execution_policy_wavefront.dir/dox/align/global_alignment_unbanded_score_execution_policy_wavefront.cpp.o -MF CMakeFiles/demo_dox_align_global_alignment_unbanded_score_execution_policy_wavefront.dir/dox/align/global_alignment_unbanded_score_execution_policy_wavefront.cpp.o.d -o CMakeFiles/demo_dox_align_global_alignment_unbanded_score_execution_policy_wavefront.dir/dox/align/global_alignment_unbanded_score_execution_policy_wavefront.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/align/global_alignment_unbanded_score_execution_policy_wavefront.cpp [ 27%] Linking CXX executable ../bin/demo_dox_align_global_alignment_unbanded cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_align_global_alignment_unbanded.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_align_global_alignment_unbanded.dir/link.d CMakeFiles/demo_dox_align_global_alignment_unbanded.dir/dox/align/global_alignment_unbanded.cpp.o -o ../bin/demo_dox_align_global_alignment_unbanded -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 27%] Built target demo_dox_align_global_alignment_unbanded make -f demos/CMakeFiles/demo_dox_align_integrate_align.dir/build.make demos/CMakeFiles/demo_dox_align_integrate_align.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_align_integrate_align.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_align_integrate_align.dir/build.make demos/CMakeFiles/demo_dox_align_integrate_align.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 27%] Building CXX object demos/CMakeFiles/demo_dox_align_integrate_align.dir/dox/align/integrate_align.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_align_integrate_align.dir/dox/align/integrate_align.cpp.o -MF CMakeFiles/demo_dox_align_integrate_align.dir/dox/align/integrate_align.cpp.o.d -o CMakeFiles/demo_dox_align_integrate_align.dir/dox/align/integrate_align.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/align/integrate_align.cpp [ 27%] Linking CXX executable ../bin/demo_dox_align_global_alignment_banded cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_align_global_alignment_banded.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_align_global_alignment_banded.dir/link.d CMakeFiles/demo_dox_align_global_alignment_banded.dir/dox/align/global_alignment_banded.cpp.o -o ../bin/demo_dox_align_global_alignment_banded -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 27%] Built target demo_dox_align_global_alignment_banded make -f demos/CMakeFiles/demo_dox_align_local_alignment_unbanded_execution_policy.dir/build.make demos/CMakeFiles/demo_dox_align_local_alignment_unbanded_execution_policy.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_align_local_alignment_unbanded_execution_policy.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_align_local_alignment_unbanded_execution_policy.dir/build.make demos/CMakeFiles/demo_dox_align_local_alignment_unbanded_execution_policy.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 27%] Building CXX object demos/CMakeFiles/demo_dox_align_local_alignment_unbanded_execution_policy.dir/dox/align/local_alignment_unbanded_execution_policy.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_align_local_alignment_unbanded_execution_policy.dir/dox/align/local_alignment_unbanded_execution_policy.cpp.o -MF CMakeFiles/demo_dox_align_local_alignment_unbanded_execution_policy.dir/dox/align/local_alignment_unbanded_execution_policy.cpp.o.d -o CMakeFiles/demo_dox_align_local_alignment_unbanded_execution_policy.dir/dox/align/local_alignment_unbanded_execution_policy.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/align/local_alignment_unbanded_execution_policy.cpp [ 27%] Linking CXX executable ../bin/demo_dox_align_global_alignment_unbanded_score_execution_policy_parallel cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_align_global_alignment_unbanded_score_execution_policy_parallel.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. [ 27%] Linking CXX executable ../bin/demo_dox_align_global_alignment_unbanded_execution_policy cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_align_global_alignment_unbanded_execution_policy.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_align_global_alignment_unbanded_score_execution_policy_parallel.dir/link.d CMakeFiles/demo_dox_align_global_alignment_unbanded_score_execution_policy_parallel.dir/dox/align/global_alignment_unbanded_score_execution_policy_parallel.cpp.o -o ../bin/demo_dox_align_global_alignment_unbanded_score_execution_policy_parallel -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 27%] Built target demo_dox_align_global_alignment_unbanded_score_execution_policy_parallel make -f demos/CMakeFiles/demo_dox_align_local_alignment_unbanded_score_execution_policy_parallel.dir/build.make demos/CMakeFiles/demo_dox_align_local_alignment_unbanded_score_execution_policy_parallel.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_align_local_alignment_unbanded_score_execution_policy_parallel.dir/DependInfo.cmake "--color=" /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_align_local_alignment_unbanded_score_execution_policy_parallel.dir/build.make demos/CMakeFiles/demo_dox_align_local_alignment_unbanded_score_execution_policy_parallel.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 27%] Building CXX object demos/CMakeFiles/demo_dox_align_local_alignment_unbanded_score_execution_policy_parallel.dir/dox/align/local_alignment_unbanded_score_execution_policy_parallel.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_align_local_alignment_unbanded_score_execution_policy_parallel.dir/dox/align/local_alignment_unbanded_score_execution_policy_parallel.cpp.o -MF CMakeFiles/demo_dox_align_local_alignment_unbanded_score_execution_policy_parallel.dir/dox/align/local_alignment_unbanded_score_execution_policy_parallel.cpp.o.d -o CMakeFiles/demo_dox_align_local_alignment_unbanded_score_execution_policy_parallel.dir/dox/align/local_alignment_unbanded_score_execution_policy_parallel.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/align/local_alignment_unbanded_score_execution_policy_parallel.cpp /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_align_global_alignment_unbanded_execution_policy.dir/link.d CMakeFiles/demo_dox_align_global_alignment_unbanded_execution_policy.dir/dox/align/global_alignment_unbanded_execution_policy.cpp.o -o ../bin/demo_dox_align_global_alignment_unbanded_execution_policy -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 27%] Built target demo_dox_align_global_alignment_unbanded_execution_policy make -f demos/CMakeFiles/demo_dox_align_local_alignment_unbanded_score_execution_policy_wavefront.dir/build.make demos/CMakeFiles/demo_dox_align_local_alignment_unbanded_score_execution_policy_wavefront.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_align_local_alignment_unbanded_score_execution_policy_wavefront.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_align_local_alignment_unbanded_score_execution_policy_wavefront.dir/build.make demos/CMakeFiles/demo_dox_align_local_alignment_unbanded_score_execution_policy_wavefront.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 27%] Building CXX object demos/CMakeFiles/demo_dox_align_local_alignment_unbanded_score_execution_policy_wavefront.dir/dox/align/local_alignment_unbanded_score_execution_policy_wavefront.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_align_local_alignment_unbanded_score_execution_policy_wavefront.dir/dox/align/local_alignment_unbanded_score_execution_policy_wavefront.cpp.o -MF CMakeFiles/demo_dox_align_local_alignment_unbanded_score_execution_policy_wavefront.dir/dox/align/local_alignment_unbanded_score_execution_policy_wavefront.cpp.o.d -o CMakeFiles/demo_dox_align_local_alignment_unbanded_score_execution_policy_wavefront.dir/dox/align/local_alignment_unbanded_score_execution_policy_wavefront.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/align/local_alignment_unbanded_score_execution_policy_wavefront.cpp [ 27%] Linking CXX executable ../bin/demo_dox_align_integrate_align cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_align_integrate_align.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_align_integrate_align.dir/link.d CMakeFiles/demo_dox_align_integrate_align.dir/dox/align/integrate_align.cpp.o -o ../bin/demo_dox_align_integrate_align -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 27%] Built target demo_dox_align_integrate_align make -f demos/CMakeFiles/demo_dox_align_extend_extend_alignment.dir/build.make demos/CMakeFiles/demo_dox_align_extend_extend_alignment.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_align_extend_extend_alignment.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_align_extend_extend_alignment.dir/build.make demos/CMakeFiles/demo_dox_align_extend_extend_alignment.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 27%] Building CXX object demos/CMakeFiles/demo_dox_align_extend_extend_alignment.dir/dox/align_extend/extend_alignment.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_align_extend_extend_alignment.dir/dox/align_extend/extend_alignment.cpp.o -MF CMakeFiles/demo_dox_align_extend_extend_alignment.dir/dox/align_extend/extend_alignment.cpp.o.d -o CMakeFiles/demo_dox_align_extend_extend_alignment.dir/dox/align_extend/extend_alignment.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/align_extend/extend_alignment.cpp [ 28%] Linking CXX executable ../bin/demo_dox_align_local_alignment_unbanded_score_execution_policy_parallel cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_align_local_alignment_unbanded_score_execution_policy_parallel.dir/link.txt --verbose=1 [ 28%] Linking CXX executable ../bin/demo_dox_align_local_alignment_unbanded_execution_policy cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_align_local_alignment_unbanded_execution_policy.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_align_local_alignment_unbanded_score_execution_policy_parallel.dir/link.d CMakeFiles/demo_dox_align_local_alignment_unbanded_score_execution_policy_parallel.dir/dox/align/local_alignment_unbanded_score_execution_policy_parallel.cpp.o -o ../bin/demo_dox_align_local_alignment_unbanded_score_execution_policy_parallel -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 28%] Built target demo_dox_align_local_alignment_unbanded_score_execution_policy_parallel make -f demos/CMakeFiles/demo_dox_align_profile_profile_seq_frac_score.dir/build.make demos/CMakeFiles/demo_dox_align_profile_profile_seq_frac_score.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_align_profile_profile_seq_frac_score.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_align_profile_profile_seq_frac_score.dir/build.make demos/CMakeFiles/demo_dox_align_profile_profile_seq_frac_score.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 28%] Building CXX object demos/CMakeFiles/demo_dox_align_profile_profile_seq_frac_score.dir/dox/align_profile/profile_seq_frac_score.cpp.o /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_align_local_alignment_unbanded_execution_policy.dir/link.d CMakeFiles/demo_dox_align_local_alignment_unbanded_execution_policy.dir/dox/align/local_alignment_unbanded_execution_policy.cpp.o -o ../bin/demo_dox_align_local_alignment_unbanded_execution_policy -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_align_profile_profile_seq_frac_score.dir/dox/align_profile/profile_seq_frac_score.cpp.o -MF CMakeFiles/demo_dox_align_profile_profile_seq_frac_score.dir/dox/align_profile/profile_seq_frac_score.cpp.o.d -o CMakeFiles/demo_dox_align_profile_profile_seq_frac_score.dir/dox/align_profile/profile_seq_frac_score.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/align_profile/profile_seq_frac_score.cpp make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 28%] Built target demo_dox_align_local_alignment_unbanded_execution_policy make -f demos/CMakeFiles/demo_dox_align_profile_profile_seq_score.dir/build.make demos/CMakeFiles/demo_dox_align_profile_profile_seq_score.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_align_profile_profile_seq_score.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_align_profile_profile_seq_score.dir/build.make demos/CMakeFiles/demo_dox_align_profile_profile_seq_score.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 28%] Building CXX object demos/CMakeFiles/demo_dox_align_profile_profile_seq_score.dir/dox/align_profile/profile_seq_score.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_align_profile_profile_seq_score.dir/dox/align_profile/profile_seq_score.cpp.o -MF CMakeFiles/demo_dox_align_profile_profile_seq_score.dir/dox/align_profile/profile_seq_score.cpp.o.d -o CMakeFiles/demo_dox_align_profile_profile_seq_score.dir/dox/align_profile/profile_seq_score.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/align_profile/profile_seq_score.cpp [ 28%] Linking CXX executable ../bin/demo_dox_align_global_alignment_unbanded_score_execution_policy_wavefront cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_align_global_alignment_unbanded_score_execution_policy_wavefront.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_align_global_alignment_unbanded_score_execution_policy_wavefront.dir/link.d CMakeFiles/demo_dox_align_global_alignment_unbanded_score_execution_policy_wavefront.dir/dox/align/global_alignment_unbanded_score_execution_policy_wavefront.cpp.o -o ../bin/demo_dox_align_global_alignment_unbanded_score_execution_policy_wavefront -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 28%] Built target demo_dox_align_global_alignment_unbanded_score_execution_policy_wavefront make -f demos/CMakeFiles/demo_dox_align_split_split_alignment.dir/build.make demos/CMakeFiles/demo_dox_align_split_split_alignment.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_align_split_split_alignment.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_align_split_split_alignment.dir/build.make demos/CMakeFiles/demo_dox_align_split_split_alignment.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 28%] Building CXX object demos/CMakeFiles/demo_dox_align_split_split_alignment.dir/dox/align_split/split_alignment.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_align_split_split_alignment.dir/dox/align_split/split_alignment.cpp.o -MF CMakeFiles/demo_dox_align_split_split_alignment.dir/dox/align_split/split_alignment.cpp.o.d -o CMakeFiles/demo_dox_align_split_split_alignment.dir/dox/align_split/split_alignment.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/align_split/split_alignment.cpp [ 28%] Linking CXX executable ../bin/demo_dox_align_local_alignment_unbanded_score_execution_policy_wavefront cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_align_local_alignment_unbanded_score_execution_policy_wavefront.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_align_local_alignment_unbanded_score_execution_policy_wavefront.dir/link.d CMakeFiles/demo_dox_align_local_alignment_unbanded_score_execution_policy_wavefront.dir/dox/align/local_alignment_unbanded_score_execution_policy_wavefront.cpp.o -o ../bin/demo_dox_align_local_alignment_unbanded_score_execution_policy_wavefront -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 28%] Built target demo_dox_align_local_alignment_unbanded_score_execution_policy_wavefront make -f demos/CMakeFiles/demo_dox_arg_parse_argument_parser.dir/build.make demos/CMakeFiles/demo_dox_arg_parse_argument_parser.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_arg_parse_argument_parser.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_arg_parse_argument_parser.dir/build.make demos/CMakeFiles/demo_dox_arg_parse_argument_parser.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 28%] Building CXX object demos/CMakeFiles/demo_dox_arg_parse_argument_parser.dir/dox/arg_parse/argument_parser.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_arg_parse_argument_parser.dir/dox/arg_parse/argument_parser.cpp.o -MF CMakeFiles/demo_dox_arg_parse_argument_parser.dir/dox/arg_parse/argument_parser.cpp.o.d -o CMakeFiles/demo_dox_arg_parse_argument_parser.dir/dox/arg_parse/argument_parser.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/arg_parse/argument_parser.cpp [ 28%] Linking CXX executable ../bin/demo_dox_align_profile_profile_seq_frac_score cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_align_profile_profile_seq_frac_score.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_align_profile_profile_seq_frac_score.dir/link.d CMakeFiles/demo_dox_align_profile_profile_seq_frac_score.dir/dox/align_profile/profile_seq_frac_score.cpp.o -o ../bin/demo_dox_align_profile_profile_seq_frac_score -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 28%] Built target demo_dox_align_profile_profile_seq_frac_score make -f demos/CMakeFiles/demo_dox_bam_io_bam_file_in.dir/build.make demos/CMakeFiles/demo_dox_bam_io_bam_file_in.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_bam_io_bam_file_in.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_bam_io_bam_file_in.dir/build.make demos/CMakeFiles/demo_dox_bam_io_bam_file_in.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 28%] Building CXX object demos/CMakeFiles/demo_dox_bam_io_bam_file_in.dir/dox/bam_io/bam_file_in.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_bam_io_bam_file_in.dir/dox/bam_io/bam_file_in.cpp.o -MF CMakeFiles/demo_dox_bam_io_bam_file_in.dir/dox/bam_io/bam_file_in.cpp.o.d -o CMakeFiles/demo_dox_bam_io_bam_file_in.dir/dox/bam_io/bam_file_in.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/bam_io/bam_file_in.cpp [ 28%] Linking CXX executable ../bin/demo_dox_align_profile_profile_seq_score cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_align_profile_profile_seq_score.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_align_profile_profile_seq_score.dir/link.d CMakeFiles/demo_dox_align_profile_profile_seq_score.dir/dox/align_profile/profile_seq_score.cpp.o -o ../bin/demo_dox_align_profile_profile_seq_score -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 28%] Built target demo_dox_align_profile_profile_seq_score make -f demos/CMakeFiles/demo_dox_bam_io_bam_tags_dict.dir/build.make demos/CMakeFiles/demo_dox_bam_io_bam_tags_dict.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_bam_io_bam_tags_dict.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_bam_io_bam_tags_dict.dir/build.make demos/CMakeFiles/demo_dox_bam_io_bam_tags_dict.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 29%] Building CXX object demos/CMakeFiles/demo_dox_bam_io_bam_tags_dict.dir/dox/bam_io/bam_tags_dict.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_bam_io_bam_tags_dict.dir/dox/bam_io/bam_tags_dict.cpp.o -MF CMakeFiles/demo_dox_bam_io_bam_tags_dict.dir/dox/bam_io/bam_tags_dict.cpp.o.d -o CMakeFiles/demo_dox_bam_io_bam_tags_dict.dir/dox/bam_io/bam_tags_dict.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/bam_io/bam_tags_dict.cpp [ 29%] Linking CXX executable ../bin/demo_dox_align_split_split_alignment cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_align_split_split_alignment.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_align_split_split_alignment.dir/link.d CMakeFiles/demo_dox_align_split_split_alignment.dir/dox/align_split/split_alignment.cpp.o -o ../bin/demo_dox_align_split_split_alignment -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 29%] Built target demo_dox_align_split_split_alignment make -f demos/CMakeFiles/demo_dox_basic_enable_if.dir/build.make demos/CMakeFiles/demo_dox_basic_enable_if.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_basic_enable_if.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_basic_enable_if.dir/build.make demos/CMakeFiles/demo_dox_basic_enable_if.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 29%] Building CXX object demos/CMakeFiles/demo_dox_basic_enable_if.dir/dox/basic/enable_if.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_basic_enable_if.dir/dox/basic/enable_if.cpp.o -MF CMakeFiles/demo_dox_basic_enable_if.dir/dox/basic/enable_if.cpp.o.d -o CMakeFiles/demo_dox_basic_enable_if.dir/dox/basic/enable_if.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/basic/enable_if.cpp [ 29%] Linking CXX executable ../bin/demo_dox_basic_enable_if cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_basic_enable_if.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_basic_enable_if.dir/link.d CMakeFiles/demo_dox_basic_enable_if.dir/dox/basic/enable_if.cpp.o -o ../bin/demo_dox_basic_enable_if -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 29%] Built target demo_dox_basic_enable_if make -f demos/CMakeFiles/demo_dox_basic_metaprogramming_control.dir/build.make demos/CMakeFiles/demo_dox_basic_metaprogramming_control.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_basic_metaprogramming_control.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_basic_metaprogramming_control.dir/build.make demos/CMakeFiles/demo_dox_basic_metaprogramming_control.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 29%] Building CXX object demos/CMakeFiles/demo_dox_basic_metaprogramming_control.dir/dox/basic/metaprogramming_control.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_basic_metaprogramming_control.dir/dox/basic/metaprogramming_control.cpp.o -MF CMakeFiles/demo_dox_basic_metaprogramming_control.dir/dox/basic/metaprogramming_control.cpp.o.d -o CMakeFiles/demo_dox_basic_metaprogramming_control.dir/dox/basic/metaprogramming_control.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/basic/metaprogramming_control.cpp [ 29%] Linking CXX executable ../bin/demo_dox_basic_metaprogramming_control cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_basic_metaprogramming_control.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_basic_metaprogramming_control.dir/link.d CMakeFiles/demo_dox_basic_metaprogramming_control.dir/dox/basic/metaprogramming_control.cpp.o -o ../bin/demo_dox_basic_metaprogramming_control -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 29%] Built target demo_dox_basic_metaprogramming_control make -f demos/CMakeFiles/demo_dox_basic_metaprogramming_logic.dir/build.make demos/CMakeFiles/demo_dox_basic_metaprogramming_logic.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_basic_metaprogramming_logic.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_basic_metaprogramming_logic.dir/build.make demos/CMakeFiles/demo_dox_basic_metaprogramming_logic.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 29%] Building CXX object demos/CMakeFiles/demo_dox_basic_metaprogramming_logic.dir/dox/basic/metaprogramming_logic.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_basic_metaprogramming_logic.dir/dox/basic/metaprogramming_logic.cpp.o -MF CMakeFiles/demo_dox_basic_metaprogramming_logic.dir/dox/basic/metaprogramming_logic.cpp.o.d -o CMakeFiles/demo_dox_basic_metaprogramming_logic.dir/dox/basic/metaprogramming_logic.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/basic/metaprogramming_logic.cpp [ 29%] Linking CXX executable ../bin/demo_dox_align_extend_extend_alignment [ 29%] Linking CXX executable ../bin/demo_dox_basic_metaprogramming_logic cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_basic_metaprogramming_logic.dir/link.txt --verbose=1 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_align_extend_extend_alignment.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_basic_metaprogramming_logic.dir/link.d CMakeFiles/demo_dox_basic_metaprogramming_logic.dir/dox/basic/metaprogramming_logic.cpp.o -o ../bin/demo_dox_basic_metaprogramming_logic -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 29%] Built target demo_dox_basic_metaprogramming_logic make -f demos/CMakeFiles/demo_dox_basic_metaprogramming_math.dir/build.make demos/CMakeFiles/demo_dox_basic_metaprogramming_math.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_basic_metaprogramming_math.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_basic_metaprogramming_math.dir/build.make demos/CMakeFiles/demo_dox_basic_metaprogramming_math.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 29%] Building CXX object demos/CMakeFiles/demo_dox_basic_metaprogramming_math.dir/dox/basic/metaprogramming_math.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_basic_metaprogramming_math.dir/dox/basic/metaprogramming_math.cpp.o -MF CMakeFiles/demo_dox_basic_metaprogramming_math.dir/dox/basic/metaprogramming_math.cpp.o.d -o CMakeFiles/demo_dox_basic_metaprogramming_math.dir/dox/basic/metaprogramming_math.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/basic/metaprogramming_math.cpp /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_align_extend_extend_alignment.dir/link.d CMakeFiles/demo_dox_align_extend_extend_alignment.dir/dox/align_extend/extend_alignment.cpp.o -o ../bin/demo_dox_align_extend_extend_alignment -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 29%] Built target demo_dox_align_extend_extend_alignment make -f demos/CMakeFiles/demo_dox_basic_metaprogramming_switch.dir/build.make demos/CMakeFiles/demo_dox_basic_metaprogramming_switch.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_basic_metaprogramming_switch.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_basic_metaprogramming_switch.dir/build.make demos/CMakeFiles/demo_dox_basic_metaprogramming_switch.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 29%] Building CXX object demos/CMakeFiles/demo_dox_basic_metaprogramming_switch.dir/dox/basic/metaprogramming_switch.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_basic_metaprogramming_switch.dir/dox/basic/metaprogramming_switch.cpp.o -MF CMakeFiles/demo_dox_basic_metaprogramming_switch.dir/dox/basic/metaprogramming_switch.cpp.o.d -o CMakeFiles/demo_dox_basic_metaprogramming_switch.dir/dox/basic/metaprogramming_switch.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/basic/metaprogramming_switch.cpp [ 29%] Linking CXX executable ../bin/demo_dox_basic_metaprogramming_math cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_basic_metaprogramming_math.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. [ 29%] Linking CXX executable ../bin/demo_dox_basic_metaprogramming_switch cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_basic_metaprogramming_switch.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_basic_metaprogramming_math.dir/link.d CMakeFiles/demo_dox_basic_metaprogramming_math.dir/dox/basic/metaprogramming_math.cpp.o -o ../bin/demo_dox_basic_metaprogramming_math -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 29%] Built target demo_dox_basic_metaprogramming_math make -f demos/CMakeFiles/demo_dox_basic_simple_type_construction.dir/build.make demos/CMakeFiles/demo_dox_basic_simple_type_construction.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_basic_simple_type_construction.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_basic_simple_type_construction.dir/build.make demos/CMakeFiles/demo_dox_basic_simple_type_construction.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. [ 30%] Building CXX object demos/CMakeFiles/demo_dox_basic_simple_type_construction.dir/dox/basic/simple_type_construction.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_basic_simple_type_construction.dir/dox/basic/simple_type_construction.cpp.o -MF CMakeFiles/demo_dox_basic_simple_type_construction.dir/dox/basic/simple_type_construction.cpp.o.d -o CMakeFiles/demo_dox_basic_simple_type_construction.dir/dox/basic/simple_type_construction.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/basic/simple_type_construction.cpp /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_basic_metaprogramming_switch.dir/link.d CMakeFiles/demo_dox_basic_metaprogramming_switch.dir/dox/basic/metaprogramming_switch.cpp.o -o ../bin/demo_dox_basic_metaprogramming_switch -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 30%] Built target demo_dox_basic_metaprogramming_switch make -f demos/CMakeFiles/demo_dox_basic_zip_iterator.dir/build.make demos/CMakeFiles/demo_dox_basic_zip_iterator.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_basic_zip_iterator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_basic_zip_iterator.dir/build.make demos/CMakeFiles/demo_dox_basic_zip_iterator.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 30%] Building CXX object demos/CMakeFiles/demo_dox_basic_zip_iterator.dir/dox/basic/zip_iterator.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_basic_zip_iterator.dir/dox/basic/zip_iterator.cpp.o -MF CMakeFiles/demo_dox_basic_zip_iterator.dir/dox/basic/zip_iterator.cpp.o.d -o CMakeFiles/demo_dox_basic_zip_iterator.dir/dox/basic/zip_iterator.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/basic/zip_iterator.cpp [ 30%] Linking CXX executable ../bin/demo_dox_basic_simple_type_construction cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_basic_simple_type_construction.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_basic_simple_type_construction.dir/link.d CMakeFiles/demo_dox_basic_simple_type_construction.dir/dox/basic/simple_type_construction.cpp.o -o ../bin/demo_dox_basic_simple_type_construction -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 30%] Linking CXX executable ../bin/demo_dox_bam_io_bam_tags_dict cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_bam_io_bam_tags_dict.dir/link.txt --verbose=1 [ 30%] Built target demo_dox_basic_simple_type_construction make -f demos/CMakeFiles/demo_dox_bed_io_UNUSED_bed_stream_read.dir/build.make demos/CMakeFiles/demo_dox_bed_io_UNUSED_bed_stream_read.dir/depend /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_bed_io_UNUSED_bed_stream_read.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_bed_io_UNUSED_bed_stream_read.dir/build.make demos/CMakeFiles/demo_dox_bed_io_UNUSED_bed_stream_read.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_bam_io_bam_tags_dict.dir/link.d CMakeFiles/demo_dox_bam_io_bam_tags_dict.dir/dox/bam_io/bam_tags_dict.cpp.o -o ../bin/demo_dox_bam_io_bam_tags_dict -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 30%] Building CXX object demos/CMakeFiles/demo_dox_bed_io_UNUSED_bed_stream_read.dir/dox/bed_io/UNUSED_bed_stream_read.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_bed_io_UNUSED_bed_stream_read.dir/dox/bed_io/UNUSED_bed_stream_read.cpp.o -MF CMakeFiles/demo_dox_bed_io_UNUSED_bed_stream_read.dir/dox/bed_io/UNUSED_bed_stream_read.cpp.o.d -o CMakeFiles/demo_dox_bed_io_UNUSED_bed_stream_read.dir/dox/bed_io/UNUSED_bed_stream_read.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/bed_io/UNUSED_bed_stream_read.cpp [ 30%] Built target demo_dox_bam_io_bam_tags_dict make -f demos/CMakeFiles/demo_dox_consensus_consensus_alignment.dir/build.make demos/CMakeFiles/demo_dox_consensus_consensus_alignment.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_consensus_consensus_alignment.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_consensus_consensus_alignment.dir/build.make demos/CMakeFiles/demo_dox_consensus_consensus_alignment.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 30%] Building CXX object demos/CMakeFiles/demo_dox_consensus_consensus_alignment.dir/dox/consensus/consensus_alignment.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_consensus_consensus_alignment.dir/dox/consensus/consensus_alignment.cpp.o -MF CMakeFiles/demo_dox_consensus_consensus_alignment.dir/dox/consensus/consensus_alignment.cpp.o.d -o CMakeFiles/demo_dox_consensus_consensus_alignment.dir/dox/consensus/consensus_alignment.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/consensus/consensus_alignment.cpp [ 30%] Linking CXX executable ../bin/demo_dox_basic_zip_iterator cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_basic_zip_iterator.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_basic_zip_iterator.dir/link.d CMakeFiles/demo_dox_basic_zip_iterator.dir/dox/basic/zip_iterator.cpp.o -o ../bin/demo_dox_basic_zip_iterator -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 30%] Built target demo_dox_basic_zip_iterator make -f demos/CMakeFiles/demo_dox_find_finder_aho_corasick.dir/build.make demos/CMakeFiles/demo_dox_find_finder_aho_corasick.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_find_finder_aho_corasick.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_find_finder_aho_corasick.dir/build.make demos/CMakeFiles/demo_dox_find_finder_aho_corasick.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 30%] Building CXX object demos/CMakeFiles/demo_dox_find_finder_aho_corasick.dir/dox/find/finder_aho_corasick.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_find_finder_aho_corasick.dir/dox/find/finder_aho_corasick.cpp.o -MF CMakeFiles/demo_dox_find_finder_aho_corasick.dir/dox/find/finder_aho_corasick.cpp.o.d -o CMakeFiles/demo_dox_find_finder_aho_corasick.dir/dox/find/finder_aho_corasick.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/find/finder_aho_corasick.cpp [ 30%] Linking CXX executable ../bin/demo_dox_bam_io_bam_file_in cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_bam_io_bam_file_in.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_bam_io_bam_file_in.dir/link.d CMakeFiles/demo_dox_bam_io_bam_file_in.dir/dox/bam_io/bam_file_in.cpp.o -o ../bin/demo_dox_bam_io_bam_file_in -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 30%] Built target demo_dox_bam_io_bam_file_in make -f demos/CMakeFiles/demo_dox_find_finder_index.dir/build.make demos/CMakeFiles/demo_dox_find_finder_index.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_find_finder_index.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_find_finder_index.dir/build.make demos/CMakeFiles/demo_dox_find_finder_index.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 30%] Building CXX object demos/CMakeFiles/demo_dox_find_finder_index.dir/dox/find/finder_index.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_find_finder_index.dir/dox/find/finder_index.cpp.o -MF CMakeFiles/demo_dox_find_finder_index.dir/dox/find/finder_index.cpp.o.d -o CMakeFiles/demo_dox_find_finder_index.dir/dox/find/finder_index.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/find/finder_index.cpp [ 30%] Linking CXX executable ../bin/demo_dox_bed_io_UNUSED_bed_stream_read cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_bed_io_UNUSED_bed_stream_read.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_bed_io_UNUSED_bed_stream_read.dir/link.d CMakeFiles/demo_dox_bed_io_UNUSED_bed_stream_read.dir/dox/bed_io/UNUSED_bed_stream_read.cpp.o -o ../bin/demo_dox_bed_io_UNUSED_bed_stream_read -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 30%] Linking CXX executable ../bin/demo_dox_arg_parse_argument_parser [ 30%] Built target demo_dox_bed_io_UNUSED_bed_stream_read cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_arg_parse_argument_parser.dir/link.txt --verbose=1 make -f demos/CMakeFiles/demo_dox_find_finder_online.dir/build.make demos/CMakeFiles/demo_dox_find_finder_online.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_find_finder_online.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_find_finder_online.dir/build.make demos/CMakeFiles/demo_dox_find_finder_online.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 31%] Building CXX object demos/CMakeFiles/demo_dox_find_finder_online.dir/dox/find/finder_online.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_find_finder_online.dir/dox/find/finder_online.cpp.o -MF CMakeFiles/demo_dox_find_finder_online.dir/dox/find/finder_online.cpp.o.d -o CMakeFiles/demo_dox_find_finder_online.dir/dox/find/finder_online.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/find/finder_online.cpp /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_arg_parse_argument_parser.dir/link.d CMakeFiles/demo_dox_arg_parse_argument_parser.dir/dox/arg_parse/argument_parser.cpp.o -o ../bin/demo_dox_arg_parse_argument_parser -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 31%] Built target demo_dox_arg_parse_argument_parser make -f demos/CMakeFiles/demo_dox_gff_io_UNUSED_gff_stream_read.dir/build.make demos/CMakeFiles/demo_dox_gff_io_UNUSED_gff_stream_read.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_gff_io_UNUSED_gff_stream_read.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_gff_io_UNUSED_gff_stream_read.dir/build.make demos/CMakeFiles/demo_dox_gff_io_UNUSED_gff_stream_read.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 31%] Building CXX object demos/CMakeFiles/demo_dox_gff_io_UNUSED_gff_stream_read.dir/dox/gff_io/UNUSED_gff_stream_read.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_gff_io_UNUSED_gff_stream_read.dir/dox/gff_io/UNUSED_gff_stream_read.cpp.o -MF CMakeFiles/demo_dox_gff_io_UNUSED_gff_stream_read.dir/dox/gff_io/UNUSED_gff_stream_read.cpp.o.d -o CMakeFiles/demo_dox_gff_io_UNUSED_gff_stream_read.dir/dox/gff_io/UNUSED_gff_stream_read.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/gff_io/UNUSED_gff_stream_read.cpp [ 31%] Linking CXX executable ../bin/demo_dox_find_finder_aho_corasick cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_find_finder_aho_corasick.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_find_finder_aho_corasick.dir/link.d CMakeFiles/demo_dox_find_finder_aho_corasick.dir/dox/find/finder_aho_corasick.cpp.o -o ../bin/demo_dox_find_finder_aho_corasick -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 31%] Built target demo_dox_find_finder_aho_corasick make -f demos/CMakeFiles/demo_dox_graph_algorithms_all_pairs_shortest_path.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_all_pairs_shortest_path.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_all_pairs_shortest_path.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_graph_algorithms_all_pairs_shortest_path.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_all_pairs_shortest_path.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 31%] Building CXX object demos/CMakeFiles/demo_dox_graph_algorithms_all_pairs_shortest_path.dir/dox/graph_algorithms/all_pairs_shortest_path.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_graph_algorithms_all_pairs_shortest_path.dir/dox/graph_algorithms/all_pairs_shortest_path.cpp.o -MF CMakeFiles/demo_dox_graph_algorithms_all_pairs_shortest_path.dir/dox/graph_algorithms/all_pairs_shortest_path.cpp.o.d -o CMakeFiles/demo_dox_graph_algorithms_all_pairs_shortest_path.dir/dox/graph_algorithms/all_pairs_shortest_path.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/graph_algorithms/all_pairs_shortest_path.cpp [ 31%] Linking CXX executable ../bin/demo_dox_find_finder_online cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_find_finder_online.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_find_finder_online.dir/link.d CMakeFiles/demo_dox_find_finder_online.dir/dox/find/finder_online.cpp.o -o ../bin/demo_dox_find_finder_online -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 31%] Built target demo_dox_find_finder_online make -f demos/CMakeFiles/demo_dox_graph_algorithms_bellman_ford_algorithm.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_bellman_ford_algorithm.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_bellman_ford_algorithm.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_graph_algorithms_bellman_ford_algorithm.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_bellman_ford_algorithm.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 31%] Building CXX object demos/CMakeFiles/demo_dox_graph_algorithms_bellman_ford_algorithm.dir/dox/graph_algorithms/bellman_ford_algorithm.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_graph_algorithms_bellman_ford_algorithm.dir/dox/graph_algorithms/bellman_ford_algorithm.cpp.o -MF CMakeFiles/demo_dox_graph_algorithms_bellman_ford_algorithm.dir/dox/graph_algorithms/bellman_ford_algorithm.cpp.o.d -o CMakeFiles/demo_dox_graph_algorithms_bellman_ford_algorithm.dir/dox/graph_algorithms/bellman_ford_algorithm.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/graph_algorithms/bellman_ford_algorithm.cpp [ 31%] Linking CXX executable ../bin/demo_dox_graph_algorithms_bellman_ford_algorithm cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_graph_algorithms_bellman_ford_algorithm.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_graph_algorithms_bellman_ford_algorithm.dir/link.d CMakeFiles/demo_dox_graph_algorithms_bellman_ford_algorithm.dir/dox/graph_algorithms/bellman_ford_algorithm.cpp.o -o ../bin/demo_dox_graph_algorithms_bellman_ford_algorithm -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 31%] Built target demo_dox_graph_algorithms_bellman_ford_algorithm make -f demos/CMakeFiles/demo_dox_graph_algorithms_breadth_first_search.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_breadth_first_search.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_breadth_first_search.dir/DependInfo.cmake "--color=" [ 31%] Linking CXX executable ../bin/demo_dox_graph_algorithms_all_pairs_shortest_path cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_graph_algorithms_all_pairs_shortest_path.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_graph_algorithms_breadth_first_search.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_breadth_first_search.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 31%] Building CXX object demos/CMakeFiles/demo_dox_graph_algorithms_breadth_first_search.dir/dox/graph_algorithms/breadth_first_search.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_graph_algorithms_breadth_first_search.dir/dox/graph_algorithms/breadth_first_search.cpp.o -MF CMakeFiles/demo_dox_graph_algorithms_breadth_first_search.dir/dox/graph_algorithms/breadth_first_search.cpp.o.d -o CMakeFiles/demo_dox_graph_algorithms_breadth_first_search.dir/dox/graph_algorithms/breadth_first_search.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/graph_algorithms/breadth_first_search.cpp /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_graph_algorithms_all_pairs_shortest_path.dir/link.d CMakeFiles/demo_dox_graph_algorithms_all_pairs_shortest_path.dir/dox/graph_algorithms/all_pairs_shortest_path.cpp.o -o ../bin/demo_dox_graph_algorithms_all_pairs_shortest_path -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 31%] Built target demo_dox_graph_algorithms_all_pairs_shortest_path make -f demos/CMakeFiles/demo_dox_graph_algorithms_dag_shortest_path.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_dag_shortest_path.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_dag_shortest_path.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_graph_algorithms_dag_shortest_path.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_dag_shortest_path.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 31%] Building CXX object demos/CMakeFiles/demo_dox_graph_algorithms_dag_shortest_path.dir/dox/graph_algorithms/dag_shortest_path.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_graph_algorithms_dag_shortest_path.dir/dox/graph_algorithms/dag_shortest_path.cpp.o -MF CMakeFiles/demo_dox_graph_algorithms_dag_shortest_path.dir/dox/graph_algorithms/dag_shortest_path.cpp.o.d -o CMakeFiles/demo_dox_graph_algorithms_dag_shortest_path.dir/dox/graph_algorithms/dag_shortest_path.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/graph_algorithms/dag_shortest_path.cpp [ 31%] Linking CXX executable ../bin/demo_dox_gff_io_UNUSED_gff_stream_read cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_gff_io_UNUSED_gff_stream_read.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_gff_io_UNUSED_gff_stream_read.dir/link.d CMakeFiles/demo_dox_gff_io_UNUSED_gff_stream_read.dir/dox/gff_io/UNUSED_gff_stream_read.cpp.o -o ../bin/demo_dox_gff_io_UNUSED_gff_stream_read -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 31%] Built target demo_dox_gff_io_UNUSED_gff_stream_read make -f demos/CMakeFiles/demo_dox_graph_algorithms_depth_first_search.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_depth_first_search.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_depth_first_search.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_graph_algorithms_depth_first_search.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_depth_first_search.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 31%] Building CXX object demos/CMakeFiles/demo_dox_graph_algorithms_depth_first_search.dir/dox/graph_algorithms/depth_first_search.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_graph_algorithms_depth_first_search.dir/dox/graph_algorithms/depth_first_search.cpp.o -MF CMakeFiles/demo_dox_graph_algorithms_depth_first_search.dir/dox/graph_algorithms/depth_first_search.cpp.o.d -o CMakeFiles/demo_dox_graph_algorithms_depth_first_search.dir/dox/graph_algorithms/depth_first_search.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/graph_algorithms/depth_first_search.cpp [ 31%] Linking CXX executable ../bin/demo_dox_graph_algorithms_breadth_first_search cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_graph_algorithms_breadth_first_search.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_graph_algorithms_breadth_first_search.dir/link.d CMakeFiles/demo_dox_graph_algorithms_breadth_first_search.dir/dox/graph_algorithms/breadth_first_search.cpp.o -o ../bin/demo_dox_graph_algorithms_breadth_first_search -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 31%] Built target demo_dox_graph_algorithms_breadth_first_search make -f demos/CMakeFiles/demo_dox_graph_algorithms_dijkstra.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_dijkstra.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_dijkstra.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_graph_algorithms_dijkstra.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_dijkstra.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 31%] Building CXX object demos/CMakeFiles/demo_dox_graph_algorithms_dijkstra.dir/dox/graph_algorithms/dijkstra.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_graph_algorithms_dijkstra.dir/dox/graph_algorithms/dijkstra.cpp.o -MF CMakeFiles/demo_dox_graph_algorithms_dijkstra.dir/dox/graph_algorithms/dijkstra.cpp.o.d -o CMakeFiles/demo_dox_graph_algorithms_dijkstra.dir/dox/graph_algorithms/dijkstra.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/graph_algorithms/dijkstra.cpp [ 32%] Linking CXX executable ../bin/demo_dox_graph_algorithms_depth_first_search cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_graph_algorithms_depth_first_search.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_graph_algorithms_depth_first_search.dir/link.d CMakeFiles/demo_dox_graph_algorithms_depth_first_search.dir/dox/graph_algorithms/depth_first_search.cpp.o -o ../bin/demo_dox_graph_algorithms_depth_first_search -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 32%] Built target demo_dox_graph_algorithms_depth_first_search make -f demos/CMakeFiles/demo_dox_graph_algorithms_floyd_warshall_algorithm.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_floyd_warshall_algorithm.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_floyd_warshall_algorithm.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_graph_algorithms_floyd_warshall_algorithm.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_floyd_warshall_algorithm.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 32%] Building CXX object demos/CMakeFiles/demo_dox_graph_algorithms_floyd_warshall_algorithm.dir/dox/graph_algorithms/floyd_warshall_algorithm.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_graph_algorithms_floyd_warshall_algorithm.dir/dox/graph_algorithms/floyd_warshall_algorithm.cpp.o -MF CMakeFiles/demo_dox_graph_algorithms_floyd_warshall_algorithm.dir/dox/graph_algorithms/floyd_warshall_algorithm.cpp.o.d -o CMakeFiles/demo_dox_graph_algorithms_floyd_warshall_algorithm.dir/dox/graph_algorithms/floyd_warshall_algorithm.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/graph_algorithms/floyd_warshall_algorithm.cpp [ 32%] Linking CXX executable ../bin/demo_dox_graph_algorithms_dag_shortest_path cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_graph_algorithms_dag_shortest_path.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_graph_algorithms_dag_shortest_path.dir/link.d CMakeFiles/demo_dox_graph_algorithms_dag_shortest_path.dir/dox/graph_algorithms/dag_shortest_path.cpp.o -o ../bin/demo_dox_graph_algorithms_dag_shortest_path -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 32%] Built target demo_dox_graph_algorithms_dag_shortest_path make -f demos/CMakeFiles/demo_dox_graph_algorithms_ford_fulkerson_algorithm.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_ford_fulkerson_algorithm.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_ford_fulkerson_algorithm.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_graph_algorithms_ford_fulkerson_algorithm.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_ford_fulkerson_algorithm.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 32%] Building CXX object demos/CMakeFiles/demo_dox_graph_algorithms_ford_fulkerson_algorithm.dir/dox/graph_algorithms/ford_fulkerson_algorithm.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_graph_algorithms_ford_fulkerson_algorithm.dir/dox/graph_algorithms/ford_fulkerson_algorithm.cpp.o -MF CMakeFiles/demo_dox_graph_algorithms_ford_fulkerson_algorithm.dir/dox/graph_algorithms/ford_fulkerson_algorithm.cpp.o.d -o CMakeFiles/demo_dox_graph_algorithms_ford_fulkerson_algorithm.dir/dox/graph_algorithms/ford_fulkerson_algorithm.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/graph_algorithms/ford_fulkerson_algorithm.cpp [ 32%] Linking CXX executable ../bin/demo_dox_graph_algorithms_floyd_warshall_algorithm cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_graph_algorithms_floyd_warshall_algorithm.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_graph_algorithms_floyd_warshall_algorithm.dir/link.d CMakeFiles/demo_dox_graph_algorithms_floyd_warshall_algorithm.dir/dox/graph_algorithms/floyd_warshall_algorithm.cpp.o -o ../bin/demo_dox_graph_algorithms_floyd_warshall_algorithm -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 32%] Built target demo_dox_graph_algorithms_floyd_warshall_algorithm make -f demos/CMakeFiles/demo_dox_graph_algorithms_heaviest_increasing_subsequence.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_heaviest_increasing_subsequence.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_heaviest_increasing_subsequence.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_graph_algorithms_heaviest_increasing_subsequence.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_heaviest_increasing_subsequence.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 32%] Building CXX object demos/CMakeFiles/demo_dox_graph_algorithms_heaviest_increasing_subsequence.dir/dox/graph_algorithms/heaviest_increasing_subsequence.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_graph_algorithms_heaviest_increasing_subsequence.dir/dox/graph_algorithms/heaviest_increasing_subsequence.cpp.o -MF CMakeFiles/demo_dox_graph_algorithms_heaviest_increasing_subsequence.dir/dox/graph_algorithms/heaviest_increasing_subsequence.cpp.o.d -o CMakeFiles/demo_dox_graph_algorithms_heaviest_increasing_subsequence.dir/dox/graph_algorithms/heaviest_increasing_subsequence.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/graph_algorithms/heaviest_increasing_subsequence.cpp [ 32%] Linking CXX executable ../bin/demo_dox_graph_algorithms_ford_fulkerson_algorithm cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_graph_algorithms_ford_fulkerson_algorithm.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_graph_algorithms_ford_fulkerson_algorithm.dir/link.d CMakeFiles/demo_dox_graph_algorithms_ford_fulkerson_algorithm.dir/dox/graph_algorithms/ford_fulkerson_algorithm.cpp.o -o ../bin/demo_dox_graph_algorithms_ford_fulkerson_algorithm -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 32%] Built target demo_dox_graph_algorithms_ford_fulkerson_algorithm make -f demos/CMakeFiles/demo_dox_graph_algorithms_kruskals_algorithm.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_kruskals_algorithm.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_kruskals_algorithm.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_graph_algorithms_kruskals_algorithm.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_kruskals_algorithm.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 32%] Building CXX object demos/CMakeFiles/demo_dox_graph_algorithms_kruskals_algorithm.dir/dox/graph_algorithms/kruskals_algorithm.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_graph_algorithms_kruskals_algorithm.dir/dox/graph_algorithms/kruskals_algorithm.cpp.o -MF CMakeFiles/demo_dox_graph_algorithms_kruskals_algorithm.dir/dox/graph_algorithms/kruskals_algorithm.cpp.o.d -o CMakeFiles/demo_dox_graph_algorithms_kruskals_algorithm.dir/dox/graph_algorithms/kruskals_algorithm.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/graph_algorithms/kruskals_algorithm.cpp [ 32%] Linking CXX executable ../bin/demo_dox_graph_algorithms_dijkstra cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_graph_algorithms_dijkstra.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_graph_algorithms_dijkstra.dir/link.d CMakeFiles/demo_dox_graph_algorithms_dijkstra.dir/dox/graph_algorithms/dijkstra.cpp.o -o ../bin/demo_dox_graph_algorithms_dijkstra -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 32%] Built target demo_dox_graph_algorithms_dijkstra make -f demos/CMakeFiles/demo_dox_graph_algorithms_longest_common_subsequence.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_longest_common_subsequence.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_longest_common_subsequence.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_graph_algorithms_longest_common_subsequence.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_longest_common_subsequence.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 32%] Building CXX object demos/CMakeFiles/demo_dox_graph_algorithms_longest_common_subsequence.dir/dox/graph_algorithms/longest_common_subsequence.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_graph_algorithms_longest_common_subsequence.dir/dox/graph_algorithms/longest_common_subsequence.cpp.o -MF CMakeFiles/demo_dox_graph_algorithms_longest_common_subsequence.dir/dox/graph_algorithms/longest_common_subsequence.cpp.o.d -o CMakeFiles/demo_dox_graph_algorithms_longest_common_subsequence.dir/dox/graph_algorithms/longest_common_subsequence.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/graph_algorithms/longest_common_subsequence.cpp [ 32%] Linking CXX executable ../bin/demo_dox_graph_algorithms_heaviest_increasing_subsequence cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_graph_algorithms_heaviest_increasing_subsequence.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_graph_algorithms_heaviest_increasing_subsequence.dir/link.d CMakeFiles/demo_dox_graph_algorithms_heaviest_increasing_subsequence.dir/dox/graph_algorithms/heaviest_increasing_subsequence.cpp.o -o ../bin/demo_dox_graph_algorithms_heaviest_increasing_subsequence -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 32%] Built target demo_dox_graph_algorithms_heaviest_increasing_subsequence make -f demos/CMakeFiles/demo_dox_graph_algorithms_longest_increasing_subsequence.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_longest_increasing_subsequence.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_longest_increasing_subsequence.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_graph_algorithms_longest_increasing_subsequence.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_longest_increasing_subsequence.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 32%] Building CXX object demos/CMakeFiles/demo_dox_graph_algorithms_longest_increasing_subsequence.dir/dox/graph_algorithms/longest_increasing_subsequence.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_graph_algorithms_longest_increasing_subsequence.dir/dox/graph_algorithms/longest_increasing_subsequence.cpp.o -MF CMakeFiles/demo_dox_graph_algorithms_longest_increasing_subsequence.dir/dox/graph_algorithms/longest_increasing_subsequence.cpp.o.d -o CMakeFiles/demo_dox_graph_algorithms_longest_increasing_subsequence.dir/dox/graph_algorithms/longest_increasing_subsequence.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/graph_algorithms/longest_increasing_subsequence.cpp [ 32%] Linking CXX executable ../bin/demo_dox_graph_algorithms_kruskals_algorithm cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_graph_algorithms_kruskals_algorithm.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_graph_algorithms_kruskals_algorithm.dir/link.d CMakeFiles/demo_dox_graph_algorithms_kruskals_algorithm.dir/dox/graph_algorithms/kruskals_algorithm.cpp.o -o ../bin/demo_dox_graph_algorithms_kruskals_algorithm -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 32%] Built target demo_dox_graph_algorithms_kruskals_algorithm make -f demos/CMakeFiles/demo_dox_graph_algorithms_prims_algorithm.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_prims_algorithm.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_prims_algorithm.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_graph_algorithms_prims_algorithm.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_prims_algorithm.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 32%] Linking CXX executable ../bin/demo_dox_graph_algorithms_longest_increasing_subsequence cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_graph_algorithms_longest_increasing_subsequence.dir/link.txt --verbose=1 [ 32%] Building CXX object demos/CMakeFiles/demo_dox_graph_algorithms_prims_algorithm.dir/dox/graph_algorithms/prims_algorithm.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_graph_algorithms_prims_algorithm.dir/dox/graph_algorithms/prims_algorithm.cpp.o -MF CMakeFiles/demo_dox_graph_algorithms_prims_algorithm.dir/dox/graph_algorithms/prims_algorithm.cpp.o.d -o CMakeFiles/demo_dox_graph_algorithms_prims_algorithm.dir/dox/graph_algorithms/prims_algorithm.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/graph_algorithms/prims_algorithm.cpp /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_graph_algorithms_longest_increasing_subsequence.dir/link.d CMakeFiles/demo_dox_graph_algorithms_longest_increasing_subsequence.dir/dox/graph_algorithms/longest_increasing_subsequence.cpp.o -o ../bin/demo_dox_graph_algorithms_longest_increasing_subsequence -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 32%] Built target demo_dox_graph_algorithms_longest_increasing_subsequence make -f demos/CMakeFiles/demo_dox_graph_algorithms_strongly_connected_components.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_strongly_connected_components.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_strongly_connected_components.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_graph_algorithms_strongly_connected_components.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_strongly_connected_components.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 32%] Building CXX object demos/CMakeFiles/demo_dox_graph_algorithms_strongly_connected_components.dir/dox/graph_algorithms/strongly_connected_components.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_graph_algorithms_strongly_connected_components.dir/dox/graph_algorithms/strongly_connected_components.cpp.o -MF CMakeFiles/demo_dox_graph_algorithms_strongly_connected_components.dir/dox/graph_algorithms/strongly_connected_components.cpp.o.d -o CMakeFiles/demo_dox_graph_algorithms_strongly_connected_components.dir/dox/graph_algorithms/strongly_connected_components.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/graph_algorithms/strongly_connected_components.cpp [ 32%] Linking CXX executable ../bin/demo_dox_find_finder_index cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_find_finder_index.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_find_finder_index.dir/link.d CMakeFiles/demo_dox_find_finder_index.dir/dox/find/finder_index.cpp.o -o ../bin/demo_dox_find_finder_index -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 32%] Built target demo_dox_find_finder_index make -f demos/CMakeFiles/demo_dox_graph_algorithms_topological_sort.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_topological_sort.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_topological_sort.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_graph_algorithms_topological_sort.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_topological_sort.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 32%] Building CXX object demos/CMakeFiles/demo_dox_graph_algorithms_topological_sort.dir/dox/graph_algorithms/topological_sort.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_graph_algorithms_topological_sort.dir/dox/graph_algorithms/topological_sort.cpp.o -MF CMakeFiles/demo_dox_graph_algorithms_topological_sort.dir/dox/graph_algorithms/topological_sort.cpp.o.d -o CMakeFiles/demo_dox_graph_algorithms_topological_sort.dir/dox/graph_algorithms/topological_sort.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/graph_algorithms/topological_sort.cpp [ 32%] Linking CXX executable ../bin/demo_dox_graph_algorithms_prims_algorithm cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_graph_algorithms_prims_algorithm.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_graph_algorithms_prims_algorithm.dir/link.d CMakeFiles/demo_dox_graph_algorithms_prims_algorithm.dir/dox/graph_algorithms/prims_algorithm.cpp.o -o ../bin/demo_dox_graph_algorithms_prims_algorithm -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 32%] Built target demo_dox_graph_algorithms_prims_algorithm make -f demos/CMakeFiles/demo_dox_graph_algorithms_transitive_closure.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_transitive_closure.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_graph_algorithms_transitive_closure.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_graph_algorithms_transitive_closure.dir/build.make demos/CMakeFiles/demo_dox_graph_algorithms_transitive_closure.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 32%] Building CXX object demos/CMakeFiles/demo_dox_graph_algorithms_transitive_closure.dir/dox/graph_algorithms/transitive_closure.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_graph_algorithms_transitive_closure.dir/dox/graph_algorithms/transitive_closure.cpp.o -MF CMakeFiles/demo_dox_graph_algorithms_transitive_closure.dir/dox/graph_algorithms/transitive_closure.cpp.o.d -o CMakeFiles/demo_dox_graph_algorithms_transitive_closure.dir/dox/graph_algorithms/transitive_closure.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/graph_algorithms/transitive_closure.cpp [ 34%] Linking CXX executable ../bin/demo_dox_graph_algorithms_longest_common_subsequence cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_graph_algorithms_longest_common_subsequence.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_graph_algorithms_longest_common_subsequence.dir/link.d CMakeFiles/demo_dox_graph_algorithms_longest_common_subsequence.dir/dox/graph_algorithms/longest_common_subsequence.cpp.o -o ../bin/demo_dox_graph_algorithms_longest_common_subsequence -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 34%] Built target demo_dox_graph_algorithms_longest_common_subsequence make -f demos/CMakeFiles/demo_dox_graph_align_graph_align.dir/build.make demos/CMakeFiles/demo_dox_graph_align_graph_align.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_graph_align_graph_align.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_graph_align_graph_align.dir/build.make demos/CMakeFiles/demo_dox_graph_align_graph_align.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 34%] Building CXX object demos/CMakeFiles/demo_dox_graph_align_graph_align.dir/dox/graph_align/graph_align.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_graph_align_graph_align.dir/dox/graph_align/graph_align.cpp.o -MF CMakeFiles/demo_dox_graph_align_graph_align.dir/dox/graph_align/graph_align.cpp.o.d -o CMakeFiles/demo_dox_graph_align_graph_align.dir/dox/graph_align/graph_align.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/graph_align/graph_align.cpp [ 34%] Linking CXX executable ../bin/demo_dox_graph_algorithms_topological_sort cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_graph_algorithms_topological_sort.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_graph_algorithms_topological_sort.dir/link.d CMakeFiles/demo_dox_graph_algorithms_topological_sort.dir/dox/graph_algorithms/topological_sort.cpp.o -o ../bin/demo_dox_graph_algorithms_topological_sort -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 34%] Built target demo_dox_graph_algorithms_topological_sort make -f demos/CMakeFiles/demo_dox_graph_types_graph_algo_dijkstra.dir/build.make demos/CMakeFiles/demo_dox_graph_types_graph_algo_dijkstra.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_graph_types_graph_algo_dijkstra.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_graph_types_graph_algo_dijkstra.dir/build.make demos/CMakeFiles/demo_dox_graph_types_graph_algo_dijkstra.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 34%] Building CXX object demos/CMakeFiles/demo_dox_graph_types_graph_algo_dijkstra.dir/dox/graph_types/graph_algo_dijkstra.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_graph_types_graph_algo_dijkstra.dir/dox/graph_types/graph_algo_dijkstra.cpp.o -MF CMakeFiles/demo_dox_graph_types_graph_algo_dijkstra.dir/dox/graph_types/graph_algo_dijkstra.cpp.o.d -o CMakeFiles/demo_dox_graph_types_graph_algo_dijkstra.dir/dox/graph_types/graph_algo_dijkstra.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/graph_types/graph_algo_dijkstra.cpp [ 34%] Linking CXX executable ../bin/demo_dox_graph_algorithms_strongly_connected_components cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_graph_algorithms_strongly_connected_components.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_graph_algorithms_strongly_connected_components.dir/link.d CMakeFiles/demo_dox_graph_algorithms_strongly_connected_components.dir/dox/graph_algorithms/strongly_connected_components.cpp.o -o ../bin/demo_dox_graph_algorithms_strongly_connected_components -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 34%] Built target demo_dox_graph_algorithms_strongly_connected_components make -f demos/CMakeFiles/demo_dox_index_UNUSED_shape.dir/build.make demos/CMakeFiles/demo_dox_index_UNUSED_shape.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_index_UNUSED_shape.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_index_UNUSED_shape.dir/build.make demos/CMakeFiles/demo_dox_index_UNUSED_shape.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 34%] Building CXX object demos/CMakeFiles/demo_dox_index_UNUSED_shape.dir/dox/index/UNUSED_shape.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_index_UNUSED_shape.dir/dox/index/UNUSED_shape.cpp.o -MF CMakeFiles/demo_dox_index_UNUSED_shape.dir/dox/index/UNUSED_shape.cpp.o.d -o CMakeFiles/demo_dox_index_UNUSED_shape.dir/dox/index/UNUSED_shape.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/index/UNUSED_shape.cpp [ 34%] Linking CXX executable ../bin/demo_dox_graph_algorithms_transitive_closure cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_graph_algorithms_transitive_closure.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_graph_algorithms_transitive_closure.dir/link.d CMakeFiles/demo_dox_graph_algorithms_transitive_closure.dir/dox/graph_algorithms/transitive_closure.cpp.o -o ../bin/demo_dox_graph_algorithms_transitive_closure -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 34%] Built target demo_dox_graph_algorithms_transitive_closure make -f demos/CMakeFiles/demo_dox_index_UNUSED_shape_hash.dir/build.make demos/CMakeFiles/demo_dox_index_UNUSED_shape_hash.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_index_UNUSED_shape_hash.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_index_UNUSED_shape_hash.dir/build.make demos/CMakeFiles/demo_dox_index_UNUSED_shape_hash.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 34%] Building CXX object demos/CMakeFiles/demo_dox_index_UNUSED_shape_hash.dir/dox/index/UNUSED_shape_hash.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_index_UNUSED_shape_hash.dir/dox/index/UNUSED_shape_hash.cpp.o -MF CMakeFiles/demo_dox_index_UNUSED_shape_hash.dir/dox/index/UNUSED_shape_hash.cpp.o.d -o CMakeFiles/demo_dox_index_UNUSED_shape_hash.dir/dox/index/UNUSED_shape_hash.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/index/UNUSED_shape_hash.cpp [ 34%] Linking CXX executable ../bin/demo_dox_index_UNUSED_shape cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_index_UNUSED_shape.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_index_UNUSED_shape.dir/link.d CMakeFiles/demo_dox_index_UNUSED_shape.dir/dox/index/UNUSED_shape.cpp.o -o ../bin/demo_dox_index_UNUSED_shape -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 34%] Built target demo_dox_index_UNUSED_shape make -f demos/CMakeFiles/demo_dox_index_UNUSED_shape_hash_next.dir/build.make demos/CMakeFiles/demo_dox_index_UNUSED_shape_hash_next.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_index_UNUSED_shape_hash_next.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_index_UNUSED_shape_hash_next.dir/build.make demos/CMakeFiles/demo_dox_index_UNUSED_shape_hash_next.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 34%] Building CXX object demos/CMakeFiles/demo_dox_index_UNUSED_shape_hash_next.dir/dox/index/UNUSED_shape_hash_next.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_index_UNUSED_shape_hash_next.dir/dox/index/UNUSED_shape_hash_next.cpp.o -MF CMakeFiles/demo_dox_index_UNUSED_shape_hash_next.dir/dox/index/UNUSED_shape_hash_next.cpp.o.d -o CMakeFiles/demo_dox_index_UNUSED_shape_hash_next.dir/dox/index/UNUSED_shape_hash_next.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/index/UNUSED_shape_hash_next.cpp [ 34%] Linking CXX executable ../bin/demo_dox_graph_types_graph_algo_dijkstra cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_graph_types_graph_algo_dijkstra.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_graph_types_graph_algo_dijkstra.dir/link.d CMakeFiles/demo_dox_graph_types_graph_algo_dijkstra.dir/dox/graph_types/graph_algo_dijkstra.cpp.o -o ../bin/demo_dox_graph_types_graph_algo_dijkstra -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 34%] Built target demo_dox_graph_types_graph_algo_dijkstra make -f demos/CMakeFiles/demo_dox_index_begin_atEnd_representative.dir/build.make demos/CMakeFiles/demo_dox_index_begin_atEnd_representative.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_index_begin_atEnd_representative.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_index_begin_atEnd_representative.dir/build.make demos/CMakeFiles/demo_dox_index_begin_atEnd_representative.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 34%] Building CXX object demos/CMakeFiles/demo_dox_index_begin_atEnd_representative.dir/dox/index/begin_atEnd_representative.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_index_begin_atEnd_representative.dir/dox/index/begin_atEnd_representative.cpp.o -MF CMakeFiles/demo_dox_index_begin_atEnd_representative.dir/dox/index/begin_atEnd_representative.cpp.o.d -o CMakeFiles/demo_dox_index_begin_atEnd_representative.dir/dox/index/begin_atEnd_representative.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/index/begin_atEnd_representative.cpp [ 34%] Linking CXX executable ../bin/demo_dox_index_UNUSED_shape_hash cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_index_UNUSED_shape_hash.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_index_UNUSED_shape_hash.dir/link.d CMakeFiles/demo_dox_index_UNUSED_shape_hash.dir/dox/index/UNUSED_shape_hash.cpp.o -o ../bin/demo_dox_index_UNUSED_shape_hash -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 34%] Built target demo_dox_index_UNUSED_shape_hash make -f demos/CMakeFiles/demo_dox_index_begin_atEnd_representative_bottomUp.dir/build.make demos/CMakeFiles/demo_dox_index_begin_atEnd_representative_bottomUp.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_index_begin_atEnd_representative_bottomUp.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_index_begin_atEnd_representative_bottomUp.dir/build.make demos/CMakeFiles/demo_dox_index_begin_atEnd_representative_bottomUp.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 34%] Building CXX object demos/CMakeFiles/demo_dox_index_begin_atEnd_representative_bottomUp.dir/dox/index/begin_atEnd_representative_bottomUp.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_index_begin_atEnd_representative_bottomUp.dir/dox/index/begin_atEnd_representative_bottomUp.cpp.o -MF CMakeFiles/demo_dox_index_begin_atEnd_representative_bottomUp.dir/dox/index/begin_atEnd_representative_bottomUp.cpp.o.d -o CMakeFiles/demo_dox_index_begin_atEnd_representative_bottomUp.dir/dox/index/begin_atEnd_representative_bottomUp.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/index/begin_atEnd_representative_bottomUp.cpp [ 34%] Linking CXX executable ../bin/demo_dox_index_UNUSED_shape_hash_next cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_index_UNUSED_shape_hash_next.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_index_UNUSED_shape_hash_next.dir/link.d CMakeFiles/demo_dox_index_UNUSED_shape_hash_next.dir/dox/index/UNUSED_shape_hash_next.cpp.o -o ../bin/demo_dox_index_UNUSED_shape_hash_next -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 34%] Built target demo_dox_index_UNUSED_shape_hash_next make -f demos/CMakeFiles/demo_dox_index_begin_range_goDown_representative_repLength.dir/build.make demos/CMakeFiles/demo_dox_index_begin_range_goDown_representative_repLength.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_index_begin_range_goDown_representative_repLength.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_index_begin_range_goDown_representative_repLength.dir/build.make demos/CMakeFiles/demo_dox_index_begin_range_goDown_representative_repLength.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 35%] Building CXX object demos/CMakeFiles/demo_dox_index_begin_range_goDown_representative_repLength.dir/dox/index/begin_range_goDown_representative_repLength.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_index_begin_range_goDown_representative_repLength.dir/dox/index/begin_range_goDown_representative_repLength.cpp.o -MF CMakeFiles/demo_dox_index_begin_range_goDown_representative_repLength.dir/dox/index/begin_range_goDown_representative_repLength.cpp.o.d -o CMakeFiles/demo_dox_index_begin_range_goDown_representative_repLength.dir/dox/index/begin_range_goDown_representative_repLength.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/index/begin_range_goDown_representative_repLength.cpp [ 36%] Linking CXX executable ../bin/demo_dox_graph_align_graph_align cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_graph_align_graph_align.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_graph_align_graph_align.dir/link.d CMakeFiles/demo_dox_graph_align_graph_align.dir/dox/graph_align/graph_align.cpp.o -o ../bin/demo_dox_graph_align_graph_align -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 36%] Built target demo_dox_graph_align_graph_align make -f demos/CMakeFiles/demo_dox_index_counting.dir/build.make demos/CMakeFiles/demo_dox_index_counting.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_index_counting.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_index_counting.dir/build.make demos/CMakeFiles/demo_dox_index_counting.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 36%] Building CXX object demos/CMakeFiles/demo_dox_index_counting.dir/dox/index/counting.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_index_counting.dir/dox/index/counting.cpp.o -MF CMakeFiles/demo_dox_index_counting.dir/dox/index/counting.cpp.o.d -o CMakeFiles/demo_dox_index_counting.dir/dox/index/counting.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/index/counting.cpp [ 36%] Linking CXX executable ../bin/demo_dox_index_begin_atEnd_representative_bottomUp cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_index_begin_atEnd_representative_bottomUp.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_index_begin_atEnd_representative_bottomUp.dir/link.d CMakeFiles/demo_dox_index_begin_atEnd_representative_bottomUp.dir/dox/index/begin_atEnd_representative_bottomUp.cpp.o -o ../bin/demo_dox_index_begin_atEnd_representative_bottomUp -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 36%] Built target demo_dox_index_begin_atEnd_representative_bottomUp make -f demos/CMakeFiles/demo_dox_index_find_repeats.dir/build.make demos/CMakeFiles/demo_dox_index_find_repeats.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_index_find_repeats.dir/DependInfo.cmake "--color=" [ 36%] Linking CXX executable ../bin/demo_dox_index_begin_atEnd_representative cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_index_begin_atEnd_representative.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_index_find_repeats.dir/build.make demos/CMakeFiles/demo_dox_index_find_repeats.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 36%] Building CXX object demos/CMakeFiles/demo_dox_index_find_repeats.dir/dox/index/find_repeats.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_index_find_repeats.dir/dox/index/find_repeats.cpp.o -MF CMakeFiles/demo_dox_index_find_repeats.dir/dox/index/find_repeats.cpp.o.d -o CMakeFiles/demo_dox_index_find_repeats.dir/dox/index/find_repeats.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/index/find_repeats.cpp /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_index_begin_atEnd_representative.dir/link.d CMakeFiles/demo_dox_index_begin_atEnd_representative.dir/dox/index/begin_atEnd_representative.cpp.o -o ../bin/demo_dox_index_begin_atEnd_representative -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 36%] Built target demo_dox_index_begin_atEnd_representative make -f demos/CMakeFiles/demo_dox_index_finder.dir/build.make demos/CMakeFiles/demo_dox_index_finder.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_index_finder.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_index_finder.dir/build.make demos/CMakeFiles/demo_dox_index_finder.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 36%] Building CXX object demos/CMakeFiles/demo_dox_index_finder.dir/dox/index/finder.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_index_finder.dir/dox/index/finder.cpp.o -MF CMakeFiles/demo_dox_index_finder.dir/dox/index/finder.cpp.o.d -o CMakeFiles/demo_dox_index_finder.dir/dox/index/finder.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/index/finder.cpp [ 36%] Linking CXX executable ../bin/demo_dox_index_begin_range_goDown_representative_repLength cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_index_begin_range_goDown_representative_repLength.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_index_begin_range_goDown_representative_repLength.dir/link.d CMakeFiles/demo_dox_index_begin_range_goDown_representative_repLength.dir/dox/index/begin_range_goDown_representative_repLength.cpp.o -o ../bin/demo_dox_index_begin_range_goDown_representative_repLength -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 36%] Built target demo_dox_index_begin_range_goDown_representative_repLength make -f demos/CMakeFiles/demo_dox_index_getOccurrences_getFrequency_range_getFibre.dir/build.make demos/CMakeFiles/demo_dox_index_getOccurrences_getFrequency_range_getFibre.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_index_getOccurrences_getFrequency_range_getFibre.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_index_getOccurrences_getFrequency_range_getFibre.dir/build.make demos/CMakeFiles/demo_dox_index_getOccurrences_getFrequency_range_getFibre.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 36%] Building CXX object demos/CMakeFiles/demo_dox_index_getOccurrences_getFrequency_range_getFibre.dir/dox/index/getOccurrences_getFrequency_range_getFibre.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_index_getOccurrences_getFrequency_range_getFibre.dir/dox/index/getOccurrences_getFrequency_range_getFibre.cpp.o -MF CMakeFiles/demo_dox_index_getOccurrences_getFrequency_range_getFibre.dir/dox/index/getOccurrences_getFrequency_range_getFibre.cpp.o.d -o CMakeFiles/demo_dox_index_getOccurrences_getFrequency_range_getFibre.dir/dox/index/getOccurrences_getFrequency_range_getFibre.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/index/getOccurrences_getFrequency_range_getFibre.cpp [ 36%] Linking CXX executable ../bin/demo_dox_index_counting cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_index_counting.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_index_counting.dir/link.d CMakeFiles/demo_dox_index_counting.dir/dox/index/counting.cpp.o -o ../bin/demo_dox_index_counting -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 36%] Built target demo_dox_index_counting make -f demos/CMakeFiles/demo_dox_index_iterator.dir/build.make demos/CMakeFiles/demo_dox_index_iterator.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_index_iterator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_index_iterator.dir/build.make demos/CMakeFiles/demo_dox_index_iterator.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 36%] Building CXX object demos/CMakeFiles/demo_dox_index_iterator.dir/dox/index/iterator.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_index_iterator.dir/dox/index/iterator.cpp.o -MF CMakeFiles/demo_dox_index_iterator.dir/dox/index/iterator.cpp.o.d -o CMakeFiles/demo_dox_index_iterator.dir/dox/index/iterator.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/index/iterator.cpp [ 36%] Linking CXX executable ../bin/demo_dox_consensus_consensus_alignment cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_consensus_consensus_alignment.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_consensus_consensus_alignment.dir/link.d CMakeFiles/demo_dox_consensus_consensus_alignment.dir/dox/consensus/consensus_alignment.cpp.o -o ../bin/demo_dox_consensus_consensus_alignment -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 36%] Built target demo_dox_consensus_consensus_alignment make -f demos/CMakeFiles/demo_dox_index_iterator_short.dir/build.make demos/CMakeFiles/demo_dox_index_iterator_short.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_index_iterator_short.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_index_iterator_short.dir/build.make demos/CMakeFiles/demo_dox_index_iterator_short.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 37%] Building CXX object demos/CMakeFiles/demo_dox_index_iterator_short.dir/dox/index/iterator_short.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_index_iterator_short.dir/dox/index/iterator_short.cpp.o -MF CMakeFiles/demo_dox_index_iterator_short.dir/dox/index/iterator_short.cpp.o.d -o CMakeFiles/demo_dox_index_iterator_short.dir/dox/index/iterator_short.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/index/iterator_short.cpp [ 37%] Linking CXX executable ../bin/demo_dox_index_finder cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_index_finder.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_index_finder.dir/link.d CMakeFiles/demo_dox_index_finder.dir/dox/index/finder.cpp.o -o ../bin/demo_dox_index_finder -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 37%] Built target demo_dox_index_finder make -f demos/CMakeFiles/demo_dox_index_length_countSequences.dir/build.make demos/CMakeFiles/demo_dox_index_length_countSequences.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_index_length_countSequences.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_index_length_countSequences.dir/build.make demos/CMakeFiles/demo_dox_index_length_countSequences.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 37%] Building CXX object demos/CMakeFiles/demo_dox_index_length_countSequences.dir/dox/index/length_countSequences.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_index_length_countSequences.dir/dox/index/length_countSequences.cpp.o -MF CMakeFiles/demo_dox_index_length_countSequences.dir/dox/index/length_countSequences.cpp.o.d -o CMakeFiles/demo_dox_index_length_countSequences.dir/dox/index/length_countSequences.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/index/length_countSequences.cpp [ 37%] Linking CXX executable ../bin/demo_dox_index_iterator cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_index_iterator.dir/link.txt --verbose=1 [ 37%] Linking CXX executable ../bin/demo_dox_index_iterator_short /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_index_iterator_short.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_index_iterator.dir/link.d CMakeFiles/demo_dox_index_iterator.dir/dox/index/iterator.cpp.o -o ../bin/demo_dox_index_iterator -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 37%] Built target demo_dox_index_iterator make -f demos/CMakeFiles/demo_dox_index_maxrepeats.dir/build.make demos/CMakeFiles/demo_dox_index_maxrepeats.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_index_maxrepeats.dir/DependInfo.cmake "--color=" /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_index_maxrepeats.dir/build.make demos/CMakeFiles/demo_dox_index_maxrepeats.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_index_iterator_short.dir/link.d CMakeFiles/demo_dox_index_iterator_short.dir/dox/index/iterator_short.cpp.o -o ../bin/demo_dox_index_iterator_short -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 37%] Building CXX object demos/CMakeFiles/demo_dox_index_maxrepeats.dir/dox/index/maxrepeats.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_index_maxrepeats.dir/dox/index/maxrepeats.cpp.o -MF CMakeFiles/demo_dox_index_maxrepeats.dir/dox/index/maxrepeats.cpp.o.d -o CMakeFiles/demo_dox_index_maxrepeats.dir/dox/index/maxrepeats.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/index/maxrepeats.cpp [ 37%] Built target demo_dox_index_iterator_short make -f demos/CMakeFiles/demo_dox_index_mummy.dir/build.make demos/CMakeFiles/demo_dox_index_mummy.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_index_mummy.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_index_mummy.dir/build.make demos/CMakeFiles/demo_dox_index_mummy.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 37%] Building CXX object demos/CMakeFiles/demo_dox_index_mummy.dir/dox/index/mummy.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_index_mummy.dir/dox/index/mummy.cpp.o -MF CMakeFiles/demo_dox_index_mummy.dir/dox/index/mummy.cpp.o.d -o CMakeFiles/demo_dox_index_mummy.dir/dox/index/mummy.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/index/mummy.cpp [ 37%] Linking CXX executable ../bin/demo_dox_index_find_repeats cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_index_find_repeats.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_index_find_repeats.dir/link.d CMakeFiles/demo_dox_index_find_repeats.dir/dox/index/find_repeats.cpp.o -o ../bin/demo_dox_index_find_repeats -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 37%] Built target demo_dox_index_find_repeats make -f demos/CMakeFiles/demo_dox_index_mums.dir/build.make demos/CMakeFiles/demo_dox_index_mums.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_index_mums.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_index_mums.dir/build.make demos/CMakeFiles/demo_dox_index_mums.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 37%] Building CXX object demos/CMakeFiles/demo_dox_index_mums.dir/dox/index/mums.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_index_mums.dir/dox/index/mums.cpp.o -MF CMakeFiles/demo_dox_index_mums.dir/dox/index/mums.cpp.o.d -o CMakeFiles/demo_dox_index_mums.dir/dox/index/mums.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/index/mums.cpp [ 37%] Linking CXX executable ../bin/demo_dox_index_maxrepeats cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_index_maxrepeats.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_index_maxrepeats.dir/link.d CMakeFiles/demo_dox_index_maxrepeats.dir/dox/index/maxrepeats.cpp.o -o ../bin/demo_dox_index_maxrepeats -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 37%] Built target demo_dox_index_maxrepeats make -f demos/CMakeFiles/demo_dox_index_node_predicate.dir/build.make demos/CMakeFiles/demo_dox_index_node_predicate.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_index_node_predicate.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_index_node_predicate.dir/build.make demos/CMakeFiles/demo_dox_index_node_predicate.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 37%] Building CXX object demos/CMakeFiles/demo_dox_index_node_predicate.dir/dox/index/node_predicate.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_index_node_predicate.dir/dox/index/node_predicate.cpp.o -MF CMakeFiles/demo_dox_index_node_predicate.dir/dox/index/node_predicate.cpp.o.d -o CMakeFiles/demo_dox_index_node_predicate.dir/dox/index/node_predicate.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/index/node_predicate.cpp [ 37%] Linking CXX executable ../bin/demo_dox_index_node_predicate cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_index_node_predicate.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_index_node_predicate.dir/link.d CMakeFiles/demo_dox_index_node_predicate.dir/dox/index/node_predicate.cpp.o -o ../bin/demo_dox_index_node_predicate -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 37%] Built target demo_dox_index_node_predicate make -f demos/CMakeFiles/demo_dox_index_open_save.dir/build.make demos/CMakeFiles/demo_dox_index_open_save.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_index_open_save.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_index_open_save.dir/build.make demos/CMakeFiles/demo_dox_index_open_save.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 38%] Building CXX object demos/CMakeFiles/demo_dox_index_open_save.dir/dox/index/open_save.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_index_open_save.dir/dox/index/open_save.cpp.o -MF CMakeFiles/demo_dox_index_open_save.dir/dox/index/open_save.cpp.o.d -o CMakeFiles/demo_dox_index_open_save.dir/dox/index/open_save.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/index/open_save.cpp [ 38%] Linking CXX executable ../../bin/test_sequence_v2 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/sequence && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_sequence_v2.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_sequence_v2.dir/link.d CMakeFiles/test_sequence_v2.dir/test_sequence_v2.cpp.o -o ../../bin/test_sequence_v2 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 38%] Linking CXX executable ../bin/demo_dox_index_getOccurrences_getFrequency_range_getFibre cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_index_getOccurrences_getFrequency_range_getFibre.dir/link.txt --verbose=1 [ 38%] Built target test_sequence_v2 make -f demos/CMakeFiles/demo_dox_index_shape_hash_init.dir/build.make demos/CMakeFiles/demo_dox_index_shape_hash_init.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_index_shape_hash_init.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_index_shape_hash_init.dir/build.make demos/CMakeFiles/demo_dox_index_shape_hash_init.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 38%] Building CXX object demos/CMakeFiles/demo_dox_index_shape_hash_init.dir/dox/index/shape_hash_init.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_index_shape_hash_init.dir/dox/index/shape_hash_init.cpp.o -MF CMakeFiles/demo_dox_index_shape_hash_init.dir/dox/index/shape_hash_init.cpp.o.d -o CMakeFiles/demo_dox_index_shape_hash_init.dir/dox/index/shape_hash_init.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/index/shape_hash_init.cpp /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_index_getOccurrences_getFrequency_range_getFibre.dir/link.d CMakeFiles/demo_dox_index_getOccurrences_getFrequency_range_getFibre.dir/dox/index/getOccurrences_getFrequency_range_getFibre.cpp.o -o ../bin/demo_dox_index_getOccurrences_getFrequency_range_getFibre -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 38%] Built target demo_dox_index_getOccurrences_getFrequency_range_getFibre make -f demos/CMakeFiles/demo_dox_index_sufarray.dir/build.make demos/CMakeFiles/demo_dox_index_sufarray.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_index_sufarray.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_index_sufarray.dir/build.make demos/CMakeFiles/demo_dox_index_sufarray.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 38%] Building CXX object demos/CMakeFiles/demo_dox_index_sufarray.dir/dox/index/sufarray.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_index_sufarray.dir/dox/index/sufarray.cpp.o -MF CMakeFiles/demo_dox_index_sufarray.dir/dox/index/sufarray.cpp.o.d -o CMakeFiles/demo_dox_index_sufarray.dir/dox/index/sufarray.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/index/sufarray.cpp [ 38%] Linking CXX executable ../bin/demo_dox_index_shape_hash_init cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_index_shape_hash_init.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_index_shape_hash_init.dir/link.d CMakeFiles/demo_dox_index_shape_hash_init.dir/dox/index/shape_hash_init.cpp.o -o ../bin/demo_dox_index_shape_hash_init -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 38%] Built target demo_dox_index_shape_hash_init make -f demos/CMakeFiles/demo_dox_index_supermaxrepeats.dir/build.make demos/CMakeFiles/demo_dox_index_supermaxrepeats.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_index_supermaxrepeats.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_index_supermaxrepeats.dir/build.make demos/CMakeFiles/demo_dox_index_supermaxrepeats.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 38%] Building CXX object demos/CMakeFiles/demo_dox_index_supermaxrepeats.dir/dox/index/supermaxrepeats.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_index_supermaxrepeats.dir/dox/index/supermaxrepeats.cpp.o -MF CMakeFiles/demo_dox_index_supermaxrepeats.dir/dox/index/supermaxrepeats.cpp.o.d -o CMakeFiles/demo_dox_index_supermaxrepeats.dir/dox/index/supermaxrepeats.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/index/supermaxrepeats.cpp [ 38%] Linking CXX executable ../bin/demo_dox_index_length_countSequences cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_index_length_countSequences.dir/link.txt --verbose=1 [ 38%] Linking CXX executable ../bin/demo_dox_index_sufarray cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_index_sufarray.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_index_sufarray.dir/link.d CMakeFiles/demo_dox_index_sufarray.dir/dox/index/sufarray.cpp.o -o ../bin/demo_dox_index_sufarray -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 38%] Built target demo_dox_index_sufarray make -f demos/CMakeFiles/demo_dox_index_textAt_indexText_saAt_indexRequire.dir/build.make demos/CMakeFiles/demo_dox_index_textAt_indexText_saAt_indexRequire.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_index_textAt_indexText_saAt_indexRequire.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_index_textAt_indexText_saAt_indexRequire.dir/build.make demos/CMakeFiles/demo_dox_index_textAt_indexText_saAt_indexRequire.dir/build /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_index_length_countSequences.dir/link.d CMakeFiles/demo_dox_index_length_countSequences.dir/dox/index/length_countSequences.cpp.o -o ../bin/demo_dox_index_length_countSequences -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 38%] Building CXX object demos/CMakeFiles/demo_dox_index_textAt_indexText_saAt_indexRequire.dir/dox/index/textAt_indexText_saAt_indexRequire.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_index_textAt_indexText_saAt_indexRequire.dir/dox/index/textAt_indexText_saAt_indexRequire.cpp.o -MF CMakeFiles/demo_dox_index_textAt_indexText_saAt_indexRequire.dir/dox/index/textAt_indexText_saAt_indexRequire.cpp.o.d -o CMakeFiles/demo_dox_index_textAt_indexText_saAt_indexRequire.dir/dox/index/textAt_indexText_saAt_indexRequire.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/index/textAt_indexText_saAt_indexRequire.cpp [ 38%] Built target demo_dox_index_length_countSequences make -f demos/CMakeFiles/demo_dox_misc_enumerate_strings.dir/build.make demos/CMakeFiles/demo_dox_misc_enumerate_strings.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_misc_enumerate_strings.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_misc_enumerate_strings.dir/build.make demos/CMakeFiles/demo_dox_misc_enumerate_strings.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 38%] Building CXX object demos/CMakeFiles/demo_dox_misc_enumerate_strings.dir/dox/misc/enumerate_strings.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_misc_enumerate_strings.dir/dox/misc/enumerate_strings.cpp.o -MF CMakeFiles/demo_dox_misc_enumerate_strings.dir/dox/misc/enumerate_strings.cpp.o.d -o CMakeFiles/demo_dox_misc_enumerate_strings.dir/dox/misc/enumerate_strings.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/misc/enumerate_strings.cpp [ 38%] Linking CXX executable ../bin/demo_dox_misc_enumerate_strings cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_misc_enumerate_strings.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_misc_enumerate_strings.dir/link.d CMakeFiles/demo_dox_misc_enumerate_strings.dir/dox/misc/enumerate_strings.cpp.o -o ../bin/demo_dox_misc_enumerate_strings -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 38%] Built target demo_dox_misc_enumerate_strings make -f demos/CMakeFiles/demo_dox_misc_get_terminal_size.dir/build.make demos/CMakeFiles/demo_dox_misc_get_terminal_size.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_misc_get_terminal_size.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_misc_get_terminal_size.dir/build.make demos/CMakeFiles/demo_dox_misc_get_terminal_size.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 38%] Building CXX object demos/CMakeFiles/demo_dox_misc_get_terminal_size.dir/dox/misc/get_terminal_size.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_misc_get_terminal_size.dir/dox/misc/get_terminal_size.cpp.o -MF CMakeFiles/demo_dox_misc_get_terminal_size.dir/dox/misc/get_terminal_size.cpp.o.d -o CMakeFiles/demo_dox_misc_get_terminal_size.dir/dox/misc/get_terminal_size.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/misc/get_terminal_size.cpp [ 38%] Linking CXX executable ../bin/demo_dox_index_supermaxrepeats cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_index_supermaxrepeats.dir/link.txt --verbose=1 [ 39%] Linking CXX executable ../bin/demo_dox_misc_get_terminal_size cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_misc_get_terminal_size.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_index_supermaxrepeats.dir/link.d CMakeFiles/demo_dox_index_supermaxrepeats.dir/dox/index/supermaxrepeats.cpp.o -o ../bin/demo_dox_index_supermaxrepeats -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 39%] Built target demo_dox_index_supermaxrepeats make -f demos/CMakeFiles/demo_dox_misc_interval_tree_example.dir/build.make demos/CMakeFiles/demo_dox_misc_interval_tree_example.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_misc_interval_tree_example.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_misc_interval_tree_example.dir/build.make demos/CMakeFiles/demo_dox_misc_interval_tree_example.dir/build /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 39%] Building CXX object demos/CMakeFiles/demo_dox_misc_interval_tree_example.dir/dox/misc/interval_tree_example.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_misc_interval_tree_example.dir/dox/misc/interval_tree_example.cpp.o -MF CMakeFiles/demo_dox_misc_interval_tree_example.dir/dox/misc/interval_tree_example.cpp.o.d -o CMakeFiles/demo_dox_misc_interval_tree_example.dir/dox/misc/interval_tree_example.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/misc/interval_tree_example.cpp /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_misc_get_terminal_size.dir/link.d CMakeFiles/demo_dox_misc_get_terminal_size.dir/dox/misc/get_terminal_size.cpp.o -o ../bin/demo_dox_misc_get_terminal_size -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 39%] Built target demo_dox_misc_get_terminal_size make -f demos/CMakeFiles/demo_dox_misc_name_store_cache.dir/build.make demos/CMakeFiles/demo_dox_misc_name_store_cache.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_misc_name_store_cache.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_misc_name_store_cache.dir/build.make demos/CMakeFiles/demo_dox_misc_name_store_cache.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 39%] Building CXX object demos/CMakeFiles/demo_dox_misc_name_store_cache.dir/dox/misc/name_store_cache.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_misc_name_store_cache.dir/dox/misc/name_store_cache.cpp.o -MF CMakeFiles/demo_dox_misc_name_store_cache.dir/dox/misc/name_store_cache.cpp.o.d -o CMakeFiles/demo_dox_misc_name_store_cache.dir/dox/misc/name_store_cache.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/misc/name_store_cache.cpp [ 39%] Linking CXX executable ../bin/demo_dox_index_textAt_indexText_saAt_indexRequire cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_index_textAt_indexText_saAt_indexRequire.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_index_textAt_indexText_saAt_indexRequire.dir/link.d CMakeFiles/demo_dox_index_textAt_indexText_saAt_indexRequire.dir/dox/index/textAt_indexText_saAt_indexRequire.cpp.o -o ../bin/demo_dox_index_textAt_indexText_saAt_indexRequire -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 39%] Built target demo_dox_index_textAt_indexText_saAt_indexRequire make -f demos/CMakeFiles/demo_dox_modifier_cyclic_shape.dir/build.make demos/CMakeFiles/demo_dox_modifier_cyclic_shape.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_modifier_cyclic_shape.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_modifier_cyclic_shape.dir/build.make demos/CMakeFiles/demo_dox_modifier_cyclic_shape.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 39%] Building CXX object demos/CMakeFiles/demo_dox_modifier_cyclic_shape.dir/dox/modifier/cyclic_shape.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_modifier_cyclic_shape.dir/dox/modifier/cyclic_shape.cpp.o -MF CMakeFiles/demo_dox_modifier_cyclic_shape.dir/dox/modifier/cyclic_shape.cpp.o.d -o CMakeFiles/demo_dox_modifier_cyclic_shape.dir/dox/modifier/cyclic_shape.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/modifier/cyclic_shape.cpp [ 39%] Linking CXX executable ../bin/demo_dox_misc_name_store_cache cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_misc_name_store_cache.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_misc_name_store_cache.dir/link.d CMakeFiles/demo_dox_misc_name_store_cache.dir/dox/misc/name_store_cache.cpp.o -o ../bin/demo_dox_misc_name_store_cache -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 39%] Built target demo_dox_misc_name_store_cache make -f demos/CMakeFiles/demo_dox_modifier_cyclic_shape_snippets.dir/build.make demos/CMakeFiles/demo_dox_modifier_cyclic_shape_snippets.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_modifier_cyclic_shape_snippets.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_modifier_cyclic_shape_snippets.dir/build.make demos/CMakeFiles/demo_dox_modifier_cyclic_shape_snippets.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 39%] Building CXX object demos/CMakeFiles/demo_dox_modifier_cyclic_shape_snippets.dir/dox/modifier/cyclic_shape_snippets.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_modifier_cyclic_shape_snippets.dir/dox/modifier/cyclic_shape_snippets.cpp.o -MF CMakeFiles/demo_dox_modifier_cyclic_shape_snippets.dir/dox/modifier/cyclic_shape_snippets.cpp.o.d -o CMakeFiles/demo_dox_modifier_cyclic_shape_snippets.dir/dox/modifier/cyclic_shape_snippets.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/modifier/cyclic_shape_snippets.cpp [ 39%] Linking CXX executable ../bin/demo_dox_modifier_cyclic_shape cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_modifier_cyclic_shape.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_modifier_cyclic_shape.dir/link.d CMakeFiles/demo_dox_modifier_cyclic_shape.dir/dox/modifier/cyclic_shape.cpp.o -o ../bin/demo_dox_modifier_cyclic_shape -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 39%] Built target demo_dox_modifier_cyclic_shape make -f demos/CMakeFiles/demo_dox_modifier_modified_string.dir/build.make demos/CMakeFiles/demo_dox_modifier_modified_string.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_modifier_modified_string.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_modifier_modified_string.dir/build.make demos/CMakeFiles/demo_dox_modifier_modified_string.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 39%] Building CXX object demos/CMakeFiles/demo_dox_modifier_modified_string.dir/dox/modifier/modified_string.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_modifier_modified_string.dir/dox/modifier/modified_string.cpp.o -MF CMakeFiles/demo_dox_modifier_modified_string.dir/dox/modifier/modified_string.cpp.o.d -o CMakeFiles/demo_dox_modifier_modified_string.dir/dox/modifier/modified_string.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/modifier/modified_string.cpp [ 39%] Linking CXX executable ../bin/demo_dox_index_mums cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_index_mums.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_index_mums.dir/link.d CMakeFiles/demo_dox_index_mums.dir/dox/index/mums.cpp.o -o ../bin/demo_dox_index_mums -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 39%] Built target demo_dox_index_mums make -f demos/CMakeFiles/demo_dox_modifier_modified_string_mod_view.dir/build.make demos/CMakeFiles/demo_dox_modifier_modified_string_mod_view.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_modifier_modified_string_mod_view.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_modifier_modified_string_mod_view.dir/build.make demos/CMakeFiles/demo_dox_modifier_modified_string_mod_view.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 39%] Building CXX object demos/CMakeFiles/demo_dox_modifier_modified_string_mod_view.dir/dox/modifier/modified_string_mod_view.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_modifier_modified_string_mod_view.dir/dox/modifier/modified_string_mod_view.cpp.o -MF CMakeFiles/demo_dox_modifier_modified_string_mod_view.dir/dox/modifier/modified_string_mod_view.cpp.o.d -o CMakeFiles/demo_dox_modifier_modified_string_mod_view.dir/dox/modifier/modified_string_mod_view.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/modifier/modified_string_mod_view.cpp [ 39%] Linking CXX executable ../bin/demo_dox_modifier_cyclic_shape_snippets cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_modifier_cyclic_shape_snippets.dir/link.txt --verbose=1 [ 39%] Linking CXX executable ../bin/demo_dox_misc_interval_tree_example cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_misc_interval_tree_example.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_modifier_cyclic_shape_snippets.dir/link.d CMakeFiles/demo_dox_modifier_cyclic_shape_snippets.dir/dox/modifier/cyclic_shape_snippets.cpp.o -o ../bin/demo_dox_modifier_cyclic_shape_snippets -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 39%] Built target demo_dox_modifier_cyclic_shape_snippets make -f demos/CMakeFiles/demo_dox_modifier_modified_string_nested.dir/build.make demos/CMakeFiles/demo_dox_modifier_modified_string_nested.dir/depend /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_modifier_modified_string_nested.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_modifier_modified_string_nested.dir/build.make demos/CMakeFiles/demo_dox_modifier_modified_string_nested.dir/build [ 39%] Linking CXX executable ../bin/demo_dox_modifier_modified_string make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_modifier_modified_string.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_misc_interval_tree_example.dir/link.d CMakeFiles/demo_dox_misc_interval_tree_example.dir/dox/misc/interval_tree_example.cpp.o -o ../bin/demo_dox_misc_interval_tree_example -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 39%] Building CXX object demos/CMakeFiles/demo_dox_modifier_modified_string_nested.dir/dox/modifier/modified_string_nested.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_modifier_modified_string_nested.dir/dox/modifier/modified_string_nested.cpp.o -MF CMakeFiles/demo_dox_modifier_modified_string_nested.dir/dox/modifier/modified_string_nested.cpp.o.d -o CMakeFiles/demo_dox_modifier_modified_string_nested.dir/dox/modifier/modified_string_nested.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/modifier/modified_string_nested.cpp [ 39%] Built target demo_dox_misc_interval_tree_example make -f demos/CMakeFiles/demo_dox_parallel_queue_example.dir/build.make demos/CMakeFiles/demo_dox_parallel_queue_example.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_parallel_queue_example.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_parallel_queue_example.dir/build.make demos/CMakeFiles/demo_dox_parallel_queue_example.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. [ 39%] Building CXX object demos/CMakeFiles/demo_dox_parallel_queue_example.dir/dox/parallel/queue_example.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_parallel_queue_example.dir/dox/parallel/queue_example.cpp.o -MF CMakeFiles/demo_dox_parallel_queue_example.dir/dox/parallel/queue_example.cpp.o.d -o CMakeFiles/demo_dox_parallel_queue_example.dir/dox/parallel/queue_example.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/parallel/queue_example.cpp /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_modifier_modified_string.dir/link.d CMakeFiles/demo_dox_modifier_modified_string.dir/dox/modifier/modified_string.cpp.o -o ../bin/demo_dox_modifier_modified_string -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 39%] Built target demo_dox_modifier_modified_string make -f demos/CMakeFiles/demo_dox_parallel_splitter_example.dir/build.make demos/CMakeFiles/demo_dox_parallel_splitter_example.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_parallel_splitter_example.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_parallel_splitter_example.dir/build.make demos/CMakeFiles/demo_dox_parallel_splitter_example.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 39%] Building CXX object demos/CMakeFiles/demo_dox_parallel_splitter_example.dir/dox/parallel/splitter_example.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_parallel_splitter_example.dir/dox/parallel/splitter_example.cpp.o -MF CMakeFiles/demo_dox_parallel_splitter_example.dir/dox/parallel/splitter_example.cpp.o.d -o CMakeFiles/demo_dox_parallel_splitter_example.dir/dox/parallel/splitter_example.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/parallel/splitter_example.cpp [ 40%] Linking CXX executable ../bin/demo_dox_modifier_modified_string_mod_view cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_modifier_modified_string_mod_view.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_modifier_modified_string_mod_view.dir/link.d CMakeFiles/demo_dox_modifier_modified_string_mod_view.dir/dox/modifier/modified_string_mod_view.cpp.o -o ../bin/demo_dox_modifier_modified_string_mod_view -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 40%] Built target demo_dox_modifier_modified_string_mod_view make -f demos/CMakeFiles/demo_dox_pipe_pool_sorter.dir/build.make demos/CMakeFiles/demo_dox_pipe_pool_sorter.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_pipe_pool_sorter.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_pipe_pool_sorter.dir/build.make demos/CMakeFiles/demo_dox_pipe_pool_sorter.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 40%] Building CXX object demos/CMakeFiles/demo_dox_pipe_pool_sorter.dir/dox/pipe/pool_sorter.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_pipe_pool_sorter.dir/dox/pipe/pool_sorter.cpp.o -MF CMakeFiles/demo_dox_pipe_pool_sorter.dir/dox/pipe/pool_sorter.cpp.o.d -o CMakeFiles/demo_dox_pipe_pool_sorter.dir/dox/pipe/pool_sorter.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/pipe/pool_sorter.cpp [ 40%] Linking CXX executable ../bin/demo_dox_parallel_splitter_example cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_parallel_splitter_example.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. [ 40%] Linking CXX executable ../bin/demo_dox_parallel_queue_example cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_parallel_queue_example.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_parallel_splitter_example.dir/link.d CMakeFiles/demo_dox_parallel_splitter_example.dir/dox/parallel/splitter_example.cpp.o -o ../bin/demo_dox_parallel_splitter_example -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 40%] Built target demo_dox_parallel_splitter_example make -f demos/CMakeFiles/demo_dox_score_score.dir/build.make demos/CMakeFiles/demo_dox_score_score.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_score_score.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_score_score.dir/build.make demos/CMakeFiles/demo_dox_score_score.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. [ 40%] Building CXX object demos/CMakeFiles/demo_dox_score_score.dir/dox/score/score.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_score_score.dir/dox/score/score.cpp.o -MF CMakeFiles/demo_dox_score_score.dir/dox/score/score.cpp.o.d -o CMakeFiles/demo_dox_score_score.dir/dox/score/score.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/score/score.cpp /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_parallel_queue_example.dir/link.d CMakeFiles/demo_dox_parallel_queue_example.dir/dox/parallel/queue_example.cpp.o -o ../bin/demo_dox_parallel_queue_example -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 40%] Built target demo_dox_parallel_queue_example make -f demos/CMakeFiles/demo_dox_seeds_seeds_add_seed.dir/build.make demos/CMakeFiles/demo_dox_seeds_seeds_add_seed.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_seeds_seeds_add_seed.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_seeds_seeds_add_seed.dir/build.make demos/CMakeFiles/demo_dox_seeds_seeds_add_seed.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 40%] Building CXX object demos/CMakeFiles/demo_dox_seeds_seeds_add_seed.dir/dox/seeds/seeds_add_seed.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_seeds_seeds_add_seed.dir/dox/seeds/seeds_add_seed.cpp.o -MF CMakeFiles/demo_dox_seeds_seeds_add_seed.dir/dox/seeds/seeds_add_seed.cpp.o.d -o CMakeFiles/demo_dox_seeds_seeds_add_seed.dir/dox/seeds/seeds_add_seed.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/seeds/seeds_add_seed.cpp [ 40%] Linking CXX executable ../bin/demo_dox_modifier_modified_string_nested cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_modifier_modified_string_nested.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_modifier_modified_string_nested.dir/link.d CMakeFiles/demo_dox_modifier_modified_string_nested.dir/dox/modifier/modified_string_nested.cpp.o -o ../bin/demo_dox_modifier_modified_string_nested -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 40%] Built target demo_dox_modifier_modified_string_nested make -f demos/CMakeFiles/demo_dox_seeds_seeds_chaining.dir/build.make demos/CMakeFiles/demo_dox_seeds_seeds_chaining.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_seeds_seeds_chaining.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_seeds_seeds_chaining.dir/build.make demos/CMakeFiles/demo_dox_seeds_seeds_chaining.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 40%] Building CXX object demos/CMakeFiles/demo_dox_seeds_seeds_chaining.dir/dox/seeds/seeds_chaining.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_seeds_seeds_chaining.dir/dox/seeds/seeds_chaining.cpp.o -MF CMakeFiles/demo_dox_seeds_seeds_chaining.dir/dox/seeds/seeds_chaining.cpp.o.d -o CMakeFiles/demo_dox_seeds_seeds_chaining.dir/dox/seeds/seeds_chaining.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/seeds/seeds_chaining.cpp [ 40%] Linking CXX executable ../bin/demo_dox_pipe_pool_sorter cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_pipe_pool_sorter.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_pipe_pool_sorter.dir/link.d CMakeFiles/demo_dox_pipe_pool_sorter.dir/dox/pipe/pool_sorter.cpp.o -o ../bin/demo_dox_pipe_pool_sorter -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 40%] Built target demo_dox_pipe_pool_sorter make -f demos/CMakeFiles/demo_dox_seeds_seeds_extension.dir/build.make demos/CMakeFiles/demo_dox_seeds_seeds_extension.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_seeds_seeds_extension.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_seeds_seeds_extension.dir/build.make demos/CMakeFiles/demo_dox_seeds_seeds_extension.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 40%] Building CXX object demos/CMakeFiles/demo_dox_seeds_seeds_extension.dir/dox/seeds/seeds_extension.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_seeds_seeds_extension.dir/dox/seeds/seeds_extension.cpp.o -MF CMakeFiles/demo_dox_seeds_seeds_extension.dir/dox/seeds/seeds_extension.cpp.o.d -o CMakeFiles/demo_dox_seeds_seeds_extension.dir/dox/seeds/seeds_extension.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/seeds/seeds_extension.cpp [ 41%] Linking CXX executable ../bin/demo_dox_seeds_seeds_add_seed cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_seeds_seeds_add_seed.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_seeds_seeds_add_seed.dir/link.d CMakeFiles/demo_dox_seeds_seeds_add_seed.dir/dox/seeds/seeds_add_seed.cpp.o -o ../bin/demo_dox_seeds_seeds_add_seed -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 41%] Built target demo_dox_seeds_seeds_add_seed make -f demos/CMakeFiles/demo_dox_seq_io_fai_index_example.dir/build.make demos/CMakeFiles/demo_dox_seq_io_fai_index_example.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_seq_io_fai_index_example.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_seq_io_fai_index_example.dir/build.make demos/CMakeFiles/demo_dox_seq_io_fai_index_example.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 41%] Building CXX object demos/CMakeFiles/demo_dox_seq_io_fai_index_example.dir/dox/seq_io/fai_index_example.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_seq_io_fai_index_example.dir/dox/seq_io/fai_index_example.cpp.o -MF CMakeFiles/demo_dox_seq_io_fai_index_example.dir/dox/seq_io/fai_index_example.cpp.o.d -o CMakeFiles/demo_dox_seq_io_fai_index_example.dir/dox/seq_io/fai_index_example.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/seq_io/fai_index_example.cpp [ 41%] Linking CXX executable ../bin/demo_dox_index_open_save cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_index_open_save.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_index_open_save.dir/link.d CMakeFiles/demo_dox_index_open_save.dir/dox/index/open_save.cpp.o -o ../bin/demo_dox_index_open_save -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 41%] Built target demo_dox_index_open_save make -f demos/CMakeFiles/demo_dox_sequence_UNUSED_infix.dir/build.make demos/CMakeFiles/demo_dox_sequence_UNUSED_infix.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_sequence_UNUSED_infix.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_sequence_UNUSED_infix.dir/build.make demos/CMakeFiles/demo_dox_sequence_UNUSED_infix.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 41%] Building CXX object demos/CMakeFiles/demo_dox_sequence_UNUSED_infix.dir/dox/sequence/UNUSED_infix.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_sequence_UNUSED_infix.dir/dox/sequence/UNUSED_infix.cpp.o -MF CMakeFiles/demo_dox_sequence_UNUSED_infix.dir/dox/sequence/UNUSED_infix.cpp.o.d -o CMakeFiles/demo_dox_sequence_UNUSED_infix.dir/dox/sequence/UNUSED_infix.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/sequence/UNUSED_infix.cpp [ 41%] Linking CXX executable ../bin/demo_dox_seeds_seeds_chaining cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_seeds_seeds_chaining.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_seeds_seeds_chaining.dir/link.d CMakeFiles/demo_dox_seeds_seeds_chaining.dir/dox/seeds/seeds_chaining.cpp.o -o ../bin/demo_dox_seeds_seeds_chaining -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 41%] Built target demo_dox_seeds_seeds_chaining make -f demos/CMakeFiles/demo_dox_sequence_UNUSED_prefix.dir/build.make demos/CMakeFiles/demo_dox_sequence_UNUSED_prefix.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_sequence_UNUSED_prefix.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_sequence_UNUSED_prefix.dir/build.make demos/CMakeFiles/demo_dox_sequence_UNUSED_prefix.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 41%] Building CXX object demos/CMakeFiles/demo_dox_sequence_UNUSED_prefix.dir/dox/sequence/UNUSED_prefix.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_sequence_UNUSED_prefix.dir/dox/sequence/UNUSED_prefix.cpp.o -MF CMakeFiles/demo_dox_sequence_UNUSED_prefix.dir/dox/sequence/UNUSED_prefix.cpp.o.d -o CMakeFiles/demo_dox_sequence_UNUSED_prefix.dir/dox/sequence/UNUSED_prefix.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/sequence/UNUSED_prefix.cpp [ 41%] Linking CXX executable ../bin/demo_dox_seeds_seeds_extension cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_seeds_seeds_extension.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_seeds_seeds_extension.dir/link.d CMakeFiles/demo_dox_seeds_seeds_extension.dir/dox/seeds/seeds_extension.cpp.o -o ../bin/demo_dox_seeds_seeds_extension -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 41%] Built target demo_dox_seeds_seeds_extension make -f demos/CMakeFiles/demo_dox_sequence_UNUSED_suffix.dir/build.make demos/CMakeFiles/demo_dox_sequence_UNUSED_suffix.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_sequence_UNUSED_suffix.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_sequence_UNUSED_suffix.dir/build.make demos/CMakeFiles/demo_dox_sequence_UNUSED_suffix.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 41%] Building CXX object demos/CMakeFiles/demo_dox_sequence_UNUSED_suffix.dir/dox/sequence/UNUSED_suffix.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_sequence_UNUSED_suffix.dir/dox/sequence/UNUSED_suffix.cpp.o -MF CMakeFiles/demo_dox_sequence_UNUSED_suffix.dir/dox/sequence/UNUSED_suffix.cpp.o.d -o CMakeFiles/demo_dox_sequence_UNUSED_suffix.dir/dox/sequence/UNUSED_suffix.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/sequence/UNUSED_suffix.cpp [ 41%] Linking CXX executable ../bin/demo_dox_score_score cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_score_score.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_score_score.dir/link.d CMakeFiles/demo_dox_score_score.dir/dox/score/score.cpp.o -o ../bin/demo_dox_score_score -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 41%] Built target demo_dox_score_score make -f demos/CMakeFiles/demo_dox_sequence_container_view_zip.dir/build.make demos/CMakeFiles/demo_dox_sequence_container_view_zip.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_sequence_container_view_zip.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_sequence_container_view_zip.dir/build.make demos/CMakeFiles/demo_dox_sequence_container_view_zip.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 42%] Building CXX object demos/CMakeFiles/demo_dox_sequence_container_view_zip.dir/dox/sequence/container_view_zip.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_sequence_container_view_zip.dir/dox/sequence/container_view_zip.cpp.o -MF CMakeFiles/demo_dox_sequence_container_view_zip.dir/dox/sequence/container_view_zip.cpp.o.d -o CMakeFiles/demo_dox_sequence_container_view_zip.dir/dox/sequence/container_view_zip.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/sequence/container_view_zip.cpp [ 42%] Linking CXX executable ../bin/demo_dox_sequence_UNUSED_infix cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_sequence_UNUSED_infix.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_sequence_UNUSED_infix.dir/link.d CMakeFiles/demo_dox_sequence_UNUSED_infix.dir/dox/sequence/UNUSED_infix.cpp.o -o ../bin/demo_dox_sequence_UNUSED_infix -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 42%] Built target demo_dox_sequence_UNUSED_infix make -f demos/CMakeFiles/demo_dox_sequence_segment.dir/build.make demos/CMakeFiles/demo_dox_sequence_segment.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_sequence_segment.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_sequence_segment.dir/build.make demos/CMakeFiles/demo_dox_sequence_segment.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 42%] Building CXX object demos/CMakeFiles/demo_dox_sequence_segment.dir/dox/sequence/segment.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_sequence_segment.dir/dox/sequence/segment.cpp.o -MF CMakeFiles/demo_dox_sequence_segment.dir/dox/sequence/segment.cpp.o.d -o CMakeFiles/demo_dox_sequence_segment.dir/dox/sequence/segment.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/sequence/segment.cpp [ 42%] Linking CXX executable ../bin/demo_dox_sequence_UNUSED_prefix cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_sequence_UNUSED_prefix.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_sequence_UNUSED_prefix.dir/link.d CMakeFiles/demo_dox_sequence_UNUSED_prefix.dir/dox/sequence/UNUSED_prefix.cpp.o -o ../bin/demo_dox_sequence_UNUSED_prefix -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 42%] Built target demo_dox_sequence_UNUSED_prefix make -f demos/CMakeFiles/demo_dox_sequence_string.dir/build.make demos/CMakeFiles/demo_dox_sequence_string.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_sequence_string.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_sequence_string.dir/build.make demos/CMakeFiles/demo_dox_sequence_string.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 42%] Building CXX object demos/CMakeFiles/demo_dox_sequence_string.dir/dox/sequence/string.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_sequence_string.dir/dox/sequence/string.cpp.o -MF CMakeFiles/demo_dox_sequence_string.dir/dox/sequence/string.cpp.o.d -o CMakeFiles/demo_dox_sequence_string.dir/dox/sequence/string.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/sequence/string.cpp [ 42%] Linking CXX executable ../bin/demo_dox_sequence_UNUSED_suffix cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_sequence_UNUSED_suffix.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_sequence_UNUSED_suffix.dir/link.d CMakeFiles/demo_dox_sequence_UNUSED_suffix.dir/dox/sequence/UNUSED_suffix.cpp.o -o ../bin/demo_dox_sequence_UNUSED_suffix -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 42%] Built target demo_dox_sequence_UNUSED_suffix make -f demos/CMakeFiles/demo_dox_sequence_string2.dir/build.make demos/CMakeFiles/demo_dox_sequence_string2.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_sequence_string2.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_sequence_string2.dir/build.make demos/CMakeFiles/demo_dox_sequence_string2.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 42%] Building CXX object demos/CMakeFiles/demo_dox_sequence_string2.dir/dox/sequence/string2.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_sequence_string2.dir/dox/sequence/string2.cpp.o -MF CMakeFiles/demo_dox_sequence_string2.dir/dox/sequence/string2.cpp.o.d -o CMakeFiles/demo_dox_sequence_string2.dir/dox/sequence/string2.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/sequence/string2.cpp [ 42%] Linking CXX executable ../bin/demo_dox_sequence_container_view_zip cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_sequence_container_view_zip.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_sequence_container_view_zip.dir/link.d CMakeFiles/demo_dox_sequence_container_view_zip.dir/dox/sequence/container_view_zip.cpp.o -o ../bin/demo_dox_sequence_container_view_zip -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 42%] Built target demo_dox_sequence_container_view_zip make -f demos/CMakeFiles/demo_dox_sequence_stringset.dir/build.make demos/CMakeFiles/demo_dox_sequence_stringset.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_sequence_stringset.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_sequence_stringset.dir/build.make demos/CMakeFiles/demo_dox_sequence_stringset.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 42%] Building CXX object demos/CMakeFiles/demo_dox_sequence_stringset.dir/dox/sequence/stringset.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_sequence_stringset.dir/dox/sequence/stringset.cpp.o -MF CMakeFiles/demo_dox_sequence_stringset.dir/dox/sequence/stringset.cpp.o.d -o CMakeFiles/demo_dox_sequence_stringset.dir/dox/sequence/stringset.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/sequence/stringset.cpp [ 42%] Linking CXX executable ../bin/demo_dox_sequence_segment cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_sequence_segment.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_sequence_segment.dir/link.d CMakeFiles/demo_dox_sequence_segment.dir/dox/sequence/segment.cpp.o -o ../bin/demo_dox_sequence_segment -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 42%] Built target demo_dox_sequence_segment make -f demos/CMakeFiles/demo_dox_statistics_build_markov_model.dir/build.make demos/CMakeFiles/demo_dox_statistics_build_markov_model.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_statistics_build_markov_model.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_statistics_build_markov_model.dir/build.make demos/CMakeFiles/demo_dox_statistics_build_markov_model.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 42%] Building CXX object demos/CMakeFiles/demo_dox_statistics_build_markov_model.dir/dox/statistics/build_markov_model.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_statistics_build_markov_model.dir/dox/statistics/build_markov_model.cpp.o -MF CMakeFiles/demo_dox_statistics_build_markov_model.dir/dox/statistics/build_markov_model.cpp.o.d -o CMakeFiles/demo_dox_statistics_build_markov_model.dir/dox/statistics/build_markov_model.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/statistics/build_markov_model.cpp [ 42%] Linking CXX executable ../bin/demo_dox_sequence_string cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_sequence_string.dir/link.txt --verbose=1 [ 42%] Linking CXX executable ../bin/demo_dox_sequence_string2 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_sequence_string2.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_sequence_string.dir/link.d CMakeFiles/demo_dox_sequence_string.dir/dox/sequence/string.cpp.o -o ../bin/demo_dox_sequence_string -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 42%] Built target demo_dox_sequence_string /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_sequence_string2.dir/link.d CMakeFiles/demo_dox_sequence_string2.dir/dox/sequence/string2.cpp.o -o ../bin/demo_dox_sequence_string2 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make -f demos/CMakeFiles/demo_dox_statistics_load_markov_model.dir/build.make demos/CMakeFiles/demo_dox_statistics_load_markov_model.dir/depend make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_statistics_load_markov_model.dir/DependInfo.cmake "--color=" [ 42%] Built target demo_dox_sequence_string2 make -f demos/CMakeFiles/demo_dox_store_store_example.dir/build.make demos/CMakeFiles/demo_dox_store_store_example.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_store_store_example.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_statistics_load_markov_model.dir/build.make demos/CMakeFiles/demo_dox_statistics_load_markov_model.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 43%] Building CXX object demos/CMakeFiles/demo_dox_statistics_load_markov_model.dir/dox/statistics/load_markov_model.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_statistics_load_markov_model.dir/dox/statistics/load_markov_model.cpp.o -MF CMakeFiles/demo_dox_statistics_load_markov_model.dir/dox/statistics/load_markov_model.cpp.o.d -o CMakeFiles/demo_dox_statistics_load_markov_model.dir/dox/statistics/load_markov_model.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/statistics/load_markov_model.cpp make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_store_store_example.dir/build.make demos/CMakeFiles/demo_dox_store_store_example.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 43%] Building CXX object demos/CMakeFiles/demo_dox_store_store_example.dir/dox/store/store_example.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_store_store_example.dir/dox/store/store_example.cpp.o -MF CMakeFiles/demo_dox_store_store_example.dir/dox/store/store_example.cpp.o.d -o CMakeFiles/demo_dox_store_store_example.dir/dox/store/store_example.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/store/store_example.cpp [ 43%] Linking CXX executable ../bin/demo_dox_seq_io_fai_index_example cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_seq_io_fai_index_example.dir/link.txt --verbose=1 [ 43%] Linking CXX executable ../bin/demo_dox_index_mummy cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_index_mummy.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_seq_io_fai_index_example.dir/link.d CMakeFiles/demo_dox_seq_io_fai_index_example.dir/dox/seq_io/fai_index_example.cpp.o -o ../bin/demo_dox_seq_io_fai_index_example -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 43%] Built target demo_dox_seq_io_fai_index_example make -f demos/CMakeFiles/demo_dox_stream_lexical_cast.dir/build.make demos/CMakeFiles/demo_dox_stream_lexical_cast.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_dox_stream_lexical_cast.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_dox_stream_lexical_cast.dir/build.make demos/CMakeFiles/demo_dox_stream_lexical_cast.dir/build /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 43%] Building CXX object demos/CMakeFiles/demo_dox_stream_lexical_cast.dir/dox/stream/lexical_cast.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_dox_stream_lexical_cast.dir/dox/stream/lexical_cast.cpp.o -MF CMakeFiles/demo_dox_stream_lexical_cast.dir/dox/stream/lexical_cast.cpp.o.d -o CMakeFiles/demo_dox_stream_lexical_cast.dir/dox/stream/lexical_cast.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/dox/stream/lexical_cast.cpp /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_index_mummy.dir/link.d CMakeFiles/demo_dox_index_mummy.dir/dox/index/mummy.cpp.o -o ../bin/demo_dox_index_mummy -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 43%] Built target demo_dox_index_mummy make -f demos/CMakeFiles/demo_howto_align_gaps_clipping.dir/build.make demos/CMakeFiles/demo_howto_align_gaps_clipping.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_howto_align_gaps_clipping.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_howto_align_gaps_clipping.dir/build.make demos/CMakeFiles/demo_howto_align_gaps_clipping.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 43%] Building CXX object demos/CMakeFiles/demo_howto_align_gaps_clipping.dir/howto/align_gaps_clipping.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_howto_align_gaps_clipping.dir/howto/align_gaps_clipping.cpp.o -MF CMakeFiles/demo_howto_align_gaps_clipping.dir/howto/align_gaps_clipping.cpp.o.d -o CMakeFiles/demo_howto_align_gaps_clipping.dir/howto/align_gaps_clipping.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/howto/align_gaps_clipping.cpp [ 43%] Linking CXX executable ../bin/demo_dox_sequence_stringset cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_sequence_stringset.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_sequence_stringset.dir/link.d CMakeFiles/demo_dox_sequence_stringset.dir/dox/sequence/stringset.cpp.o -o ../bin/demo_dox_sequence_stringset -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 43%] Built target demo_dox_sequence_stringset make -f demos/CMakeFiles/demo_howto_custom_file_endings.dir/build.make demos/CMakeFiles/demo_howto_custom_file_endings.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_howto_custom_file_endings.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_howto_custom_file_endings.dir/build.make demos/CMakeFiles/demo_howto_custom_file_endings.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 43%] Building CXX object demos/CMakeFiles/demo_howto_custom_file_endings.dir/howto/custom_file_endings.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_howto_custom_file_endings.dir/howto/custom_file_endings.cpp.o -MF CMakeFiles/demo_howto_custom_file_endings.dir/howto/custom_file_endings.cpp.o.d -o CMakeFiles/demo_howto_custom_file_endings.dir/howto/custom_file_endings.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/howto/custom_file_endings.cpp [ 43%] Linking CXX executable ../bin/demo_dox_stream_lexical_cast cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_stream_lexical_cast.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_stream_lexical_cast.dir/link.d CMakeFiles/demo_dox_stream_lexical_cast.dir/dox/stream/lexical_cast.cpp.o -o ../bin/demo_dox_stream_lexical_cast -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 43%] Built target demo_dox_stream_lexical_cast make -f demos/CMakeFiles/demo_howto_efficiently_import_sequences.dir/build.make demos/CMakeFiles/demo_howto_efficiently_import_sequences.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_howto_efficiently_import_sequences.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_howto_efficiently_import_sequences.dir/build.make demos/CMakeFiles/demo_howto_efficiently_import_sequences.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 43%] Building CXX object demos/CMakeFiles/demo_howto_efficiently_import_sequences.dir/howto/efficiently_import_sequences.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_howto_efficiently_import_sequences.dir/howto/efficiently_import_sequences.cpp.o -MF CMakeFiles/demo_howto_efficiently_import_sequences.dir/howto/efficiently_import_sequences.cpp.o.d -o CMakeFiles/demo_howto_efficiently_import_sequences.dir/howto/efficiently_import_sequences.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/howto/efficiently_import_sequences.cpp [ 43%] Linking CXX executable ../bin/demo_howto_align_gaps_clipping cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_howto_align_gaps_clipping.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_howto_align_gaps_clipping.dir/link.d CMakeFiles/demo_howto_align_gaps_clipping.dir/howto/align_gaps_clipping.cpp.o -o ../bin/demo_howto_align_gaps_clipping -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 43%] Built target demo_howto_align_gaps_clipping make -f demos/CMakeFiles/demo_howto_filter_similar_sequences.dir/build.make demos/CMakeFiles/demo_howto_filter_similar_sequences.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_howto_filter_similar_sequences.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_howto_filter_similar_sequences.dir/build.make demos/CMakeFiles/demo_howto_filter_similar_sequences.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 44%] Building CXX object demos/CMakeFiles/demo_howto_filter_similar_sequences.dir/howto/filter_similar_sequences.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_howto_filter_similar_sequences.dir/howto/filter_similar_sequences.cpp.o -MF CMakeFiles/demo_howto_filter_similar_sequences.dir/howto/filter_similar_sequences.cpp.o.d -o CMakeFiles/demo_howto_filter_similar_sequences.dir/howto/filter_similar_sequences.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/howto/filter_similar_sequences.cpp [ 44%] Linking CXX executable ../bin/demo_dox_statistics_load_markov_model cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_statistics_load_markov_model.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_statistics_load_markov_model.dir/link.d CMakeFiles/demo_dox_statistics_load_markov_model.dir/dox/statistics/load_markov_model.cpp.o -o ../bin/demo_dox_statistics_load_markov_model -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 44%] Built target demo_dox_statistics_load_markov_model make -f demos/CMakeFiles/demo_howto_scores_init_score.dir/build.make demos/CMakeFiles/demo_howto_scores_init_score.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_howto_scores_init_score.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_howto_scores_init_score.dir/build.make demos/CMakeFiles/demo_howto_scores_init_score.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 44%] Building CXX object demos/CMakeFiles/demo_howto_scores_init_score.dir/howto/scores/init_score.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_howto_scores_init_score.dir/howto/scores/init_score.cpp.o -MF CMakeFiles/demo_howto_scores_init_score.dir/howto/scores/init_score.cpp.o.d -o CMakeFiles/demo_howto_scores_init_score.dir/howto/scores/init_score.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/howto/scores/init_score.cpp [ 44%] Linking CXX executable ../bin/demo_howto_scores_init_score cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_howto_scores_init_score.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_howto_scores_init_score.dir/link.d CMakeFiles/demo_howto_scores_init_score.dir/howto/scores/init_score.cpp.o -o ../bin/demo_howto_scores_init_score -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 44%] Built target demo_howto_scores_init_score make -f demos/CMakeFiles/demo_howto_scores_load_score.dir/build.make demos/CMakeFiles/demo_howto_scores_load_score.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_howto_scores_load_score.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_howto_scores_load_score.dir/build.make demos/CMakeFiles/demo_howto_scores_load_score.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 44%] Building CXX object demos/CMakeFiles/demo_howto_scores_load_score.dir/howto/scores/load_score.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_howto_scores_load_score.dir/howto/scores/load_score.cpp.o -MF CMakeFiles/demo_howto_scores_load_score.dir/howto/scores/load_score.cpp.o.d -o CMakeFiles/demo_howto_scores_load_score.dir/howto/scores/load_score.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/howto/scores/load_score.cpp [ 44%] Linking CXX executable ../bin/demo_howto_custom_file_endings cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_howto_custom_file_endings.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_howto_custom_file_endings.dir/link.d CMakeFiles/demo_howto_custom_file_endings.dir/howto/custom_file_endings.cpp.o -o ../bin/demo_howto_custom_file_endings -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 44%] Built target demo_howto_custom_file_endings make -f demos/CMakeFiles/demo_howto_using_zip_iterator.dir/build.make demos/CMakeFiles/demo_howto_using_zip_iterator.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_howto_using_zip_iterator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_howto_using_zip_iterator.dir/build.make demos/CMakeFiles/demo_howto_using_zip_iterator.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 44%] Building CXX object demos/CMakeFiles/demo_howto_using_zip_iterator.dir/howto/using_zip_iterator.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_howto_using_zip_iterator.dir/howto/using_zip_iterator.cpp.o -MF CMakeFiles/demo_howto_using_zip_iterator.dir/howto/using_zip_iterator.cpp.o.d -o CMakeFiles/demo_howto_using_zip_iterator.dir/howto/using_zip_iterator.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/howto/using_zip_iterator.cpp [ 44%] Linking CXX executable ../bin/demo_howto_efficiently_import_sequences cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_howto_efficiently_import_sequences.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_howto_efficiently_import_sequences.dir/link.d CMakeFiles/demo_howto_efficiently_import_sequences.dir/howto/efficiently_import_sequences.cpp.o -o ../bin/demo_howto_efficiently_import_sequences -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 44%] Built target demo_howto_efficiently_import_sequences make -f demos/CMakeFiles/demo_tabix_io_tabix_vcf.dir/build.make demos/CMakeFiles/demo_tabix_io_tabix_vcf.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tabix_io_tabix_vcf.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tabix_io_tabix_vcf.dir/build.make demos/CMakeFiles/demo_tabix_io_tabix_vcf.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 44%] Building CXX object demos/CMakeFiles/demo_tabix_io_tabix_vcf.dir/tabix_io/tabix_vcf.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tabix_io_tabix_vcf.dir/tabix_io/tabix_vcf.cpp.o -MF CMakeFiles/demo_tabix_io_tabix_vcf.dir/tabix_io/tabix_vcf.cpp.o.d -o CMakeFiles/demo_tabix_io_tabix_vcf.dir/tabix_io/tabix_vcf.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tabix_io/tabix_vcf.cpp [ 44%] Linking CXX executable ../bin/demo_howto_scores_load_score cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_howto_scores_load_score.dir/link.txt --verbose=1 [ 44%] Linking CXX executable ../bin/demo_dox_statistics_build_markov_model cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_statistics_build_markov_model.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_howto_scores_load_score.dir/link.d CMakeFiles/demo_howto_scores_load_score.dir/howto/scores/load_score.cpp.o -o ../bin/demo_howto_scores_load_score -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 44%] Built target demo_howto_scores_load_score make -f demos/CMakeFiles/demo_tutorial_a_first_example_base.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_base.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_a_first_example_base.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_a_first_example_base.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_base.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_statistics_build_markov_model.dir/link.d CMakeFiles/demo_dox_statistics_build_markov_model.dir/dox/statistics/build_markov_model.cpp.o -o ../bin/demo_dox_statistics_build_markov_model -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 44%] Building CXX object demos/CMakeFiles/demo_tutorial_a_first_example_base.dir/tutorial/a_first_example/base.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_a_first_example_base.dir/tutorial/a_first_example/base.cpp.o -MF CMakeFiles/demo_tutorial_a_first_example_base.dir/tutorial/a_first_example/base.cpp.o.d -o CMakeFiles/demo_tutorial_a_first_example_base.dir/tutorial/a_first_example/base.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/a_first_example/base.cpp [ 44%] Built target demo_dox_statistics_build_markov_model make -f demos/CMakeFiles/demo_tutorial_a_first_example_basic_code.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_basic_code.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_a_first_example_basic_code.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_a_first_example_basic_code.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_basic_code.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 44%] Building CXX object demos/CMakeFiles/demo_tutorial_a_first_example_basic_code.dir/tutorial/a_first_example/basic_code.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_a_first_example_basic_code.dir/tutorial/a_first_example/basic_code.cpp.o -MF CMakeFiles/demo_tutorial_a_first_example_basic_code.dir/tutorial/a_first_example/basic_code.cpp.o.d -o CMakeFiles/demo_tutorial_a_first_example_basic_code.dir/tutorial/a_first_example/basic_code.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/a_first_example/basic_code.cpp [ 44%] Linking CXX executable ../bin/demo_howto_using_zip_iterator cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_howto_using_zip_iterator.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_howto_using_zip_iterator.dir/link.d CMakeFiles/demo_howto_using_zip_iterator.dir/howto/using_zip_iterator.cpp.o -o ../bin/demo_howto_using_zip_iterator -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 44%] Built target demo_howto_using_zip_iterator make -f demos/CMakeFiles/demo_tutorial_a_first_example_basic_code_detailed.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_basic_code_detailed.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_a_first_example_basic_code_detailed.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_a_first_example_basic_code_detailed.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_basic_code_detailed.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 44%] Building CXX object demos/CMakeFiles/demo_tutorial_a_first_example_basic_code_detailed.dir/tutorial/a_first_example/basic_code_detailed.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_a_first_example_basic_code_detailed.dir/tutorial/a_first_example/basic_code_detailed.cpp.o -MF CMakeFiles/demo_tutorial_a_first_example_basic_code_detailed.dir/tutorial/a_first_example/basic_code_detailed.cpp.o.d -o CMakeFiles/demo_tutorial_a_first_example_basic_code_detailed.dir/tutorial/a_first_example/basic_code_detailed.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/a_first_example/basic_code_detailed.cpp [ 45%] Linking CXX executable ../bin/demo_tutorial_a_first_example_basic_code cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_a_first_example_basic_code.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_a_first_example_basic_code.dir/link.d CMakeFiles/demo_tutorial_a_first_example_basic_code.dir/tutorial/a_first_example/basic_code.cpp.o -o ../bin/demo_tutorial_a_first_example_basic_code -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 45%] Built target demo_tutorial_a_first_example_basic_code make -f demos/CMakeFiles/demo_tutorial_a_first_example_code_encapsulation.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_code_encapsulation.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_a_first_example_code_encapsulation.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_a_first_example_code_encapsulation.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_code_encapsulation.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 45%] Building CXX object demos/CMakeFiles/demo_tutorial_a_first_example_code_encapsulation.dir/tutorial/a_first_example/code_encapsulation.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_a_first_example_code_encapsulation.dir/tutorial/a_first_example/code_encapsulation.cpp.o -MF CMakeFiles/demo_tutorial_a_first_example_code_encapsulation.dir/tutorial/a_first_example/code_encapsulation.cpp.o.d -o CMakeFiles/demo_tutorial_a_first_example_code_encapsulation.dir/tutorial/a_first_example/code_encapsulation.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/a_first_example/code_encapsulation.cpp [ 45%] Linking CXX executable ../bin/demo_tutorial_a_first_example_basic_code_detailed cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_a_first_example_basic_code_detailed.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_a_first_example_basic_code_detailed.dir/link.d CMakeFiles/demo_tutorial_a_first_example_basic_code_detailed.dir/tutorial/a_first_example/basic_code_detailed.cpp.o -o ../bin/demo_tutorial_a_first_example_basic_code_detailed -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 45%] Built target demo_tutorial_a_first_example_basic_code_detailed make -f demos/CMakeFiles/demo_tutorial_a_first_example_example_tags.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_example_tags.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_a_first_example_example_tags.dir/DependInfo.cmake "--color=" [ 45%] Linking CXX executable ../bin/demo_howto_filter_similar_sequences cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_howto_filter_similar_sequences.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_a_first_example_example_tags.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_example_tags.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 45%] Building CXX object demos/CMakeFiles/demo_tutorial_a_first_example_example_tags.dir/tutorial/a_first_example/example_tags.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_a_first_example_example_tags.dir/tutorial/a_first_example/example_tags.cpp.o -MF CMakeFiles/demo_tutorial_a_first_example_example_tags.dir/tutorial/a_first_example/example_tags.cpp.o.d -o CMakeFiles/demo_tutorial_a_first_example_example_tags.dir/tutorial/a_first_example/example_tags.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/a_first_example/example_tags.cpp [ 45%] Linking CXX executable ../bin/demo_tutorial_a_first_example_example_tags /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_a_first_example_example_tags.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_a_first_example_example_tags.dir/link.d CMakeFiles/demo_tutorial_a_first_example_example_tags.dir/tutorial/a_first_example/example_tags.cpp.o -o ../bin/demo_tutorial_a_first_example_example_tags -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_howto_filter_similar_sequences.dir/link.d CMakeFiles/demo_howto_filter_similar_sequences.dir/howto/filter_similar_sequences.cpp.o -o ../bin/demo_howto_filter_similar_sequences -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 45%] Built target demo_tutorial_a_first_example_example_tags make -f demos/CMakeFiles/demo_tutorial_a_first_example_example_tags_for_print.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_example_tags_for_print.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_a_first_example_example_tags_for_print.dir/DependInfo.cmake "--color=" [ 45%] Built target demo_howto_filter_similar_sequences make -f demos/CMakeFiles/demo_tutorial_a_first_example_example_tempSubclassing.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_example_tempSubclassing.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_a_first_example_example_tempSubclassing.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_a_first_example_example_tags_for_print.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_example_tags_for_print.dir/build make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_a_first_example_example_tempSubclassing.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_example_tempSubclassing.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 45%] Building CXX object demos/CMakeFiles/demo_tutorial_a_first_example_example_tags_for_print.dir/tutorial/a_first_example/example_tags_for_print.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_a_first_example_example_tags_for_print.dir/tutorial/a_first_example/example_tags_for_print.cpp.o -MF CMakeFiles/demo_tutorial_a_first_example_example_tags_for_print.dir/tutorial/a_first_example/example_tags_for_print.cpp.o.d -o CMakeFiles/demo_tutorial_a_first_example_example_tags_for_print.dir/tutorial/a_first_example/example_tags_for_print.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/a_first_example/example_tags_for_print.cpp [ 45%] Building CXX object demos/CMakeFiles/demo_tutorial_a_first_example_example_tempSubclassing.dir/tutorial/a_first_example/example_tempSubclassing.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_a_first_example_example_tempSubclassing.dir/tutorial/a_first_example/example_tempSubclassing.cpp.o -MF CMakeFiles/demo_tutorial_a_first_example_example_tempSubclassing.dir/tutorial/a_first_example/example_tempSubclassing.cpp.o.d -o CMakeFiles/demo_tutorial_a_first_example_example_tempSubclassing.dir/tutorial/a_first_example/example_tempSubclassing.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/a_first_example/example_tempSubclassing.cpp [ 45%] Linking CXX executable ../bin/demo_tutorial_a_first_example_example_tempSubclassing cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_a_first_example_example_tempSubclassing.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_a_first_example_example_tempSubclassing.dir/link.d CMakeFiles/demo_tutorial_a_first_example_example_tempSubclassing.dir/tutorial/a_first_example/example_tempSubclassing.cpp.o -o ../bin/demo_tutorial_a_first_example_example_tempSubclassing -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 45%] Built target demo_tutorial_a_first_example_example_tempSubclassing make -f demos/CMakeFiles/demo_tutorial_a_first_example_final_result.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_final_result.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_a_first_example_final_result.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_a_first_example_final_result.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_final_result.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 45%] Building CXX object demos/CMakeFiles/demo_tutorial_a_first_example_final_result.dir/tutorial/a_first_example/final_result.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_a_first_example_final_result.dir/tutorial/a_first_example/final_result.cpp.o -MF CMakeFiles/demo_tutorial_a_first_example_final_result.dir/tutorial/a_first_example/final_result.cpp.o.d -o CMakeFiles/demo_tutorial_a_first_example_final_result.dir/tutorial/a_first_example/final_result.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/a_first_example/final_result.cpp [ 45%] Linking CXX executable ../../bin/test_seeds_banded_chain_alignment_interface cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds && /usr/bin/cmake -E cmake_link_script CMakeFiles/test_seeds_banded_chain_alignment_interface.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. [ 45%] Linking CXX executable ../bin/demo_tutorial_a_first_example_base cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_a_first_example_base.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_a_first_example_base.dir/link.d CMakeFiles/demo_tutorial_a_first_example_base.dir/tutorial/a_first_example/base.cpp.o -o ../bin/demo_tutorial_a_first_example_base -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 45%] Built target demo_tutorial_a_first_example_base /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/test_seeds_banded_chain_alignment_interface.dir/link.d CMakeFiles/test_seeds_banded_chain_alignment_interface.dir/test_banded_chain_alignment_interface.cpp.o -o ../../bin/test_seeds_banded_chain_alignment_interface -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make -f demos/CMakeFiles/demo_tutorial_a_first_example_solution_1.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_solution_1.dir/depend make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_a_first_example_solution_1.dir/DependInfo.cmake "--color=" [ 45%] Built target test_seeds_banded_chain_alignment_interface make -f demos/CMakeFiles/demo_tutorial_a_first_example_solution_2.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_solution_2.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_a_first_example_solution_2.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_a_first_example_solution_1.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_solution_1.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_a_first_example_solution_2.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_solution_2.dir/build [ 45%] Building CXX object demos/CMakeFiles/demo_tutorial_a_first_example_solution_1.dir/tutorial/a_first_example/solution_1.cpp.o make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_a_first_example_solution_1.dir/tutorial/a_first_example/solution_1.cpp.o -MF CMakeFiles/demo_tutorial_a_first_example_solution_1.dir/tutorial/a_first_example/solution_1.cpp.o.d -o CMakeFiles/demo_tutorial_a_first_example_solution_1.dir/tutorial/a_first_example/solution_1.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/a_first_example/solution_1.cpp [ 45%] Building CXX object demos/CMakeFiles/demo_tutorial_a_first_example_solution_2.dir/tutorial/a_first_example/solution_2.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_a_first_example_solution_2.dir/tutorial/a_first_example/solution_2.cpp.o -MF CMakeFiles/demo_tutorial_a_first_example_solution_2.dir/tutorial/a_first_example/solution_2.cpp.o.d -o CMakeFiles/demo_tutorial_a_first_example_solution_2.dir/tutorial/a_first_example/solution_2.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/a_first_example/solution_2.cpp [ 45%] Linking CXX executable ../bin/demo_tutorial_a_first_example_code_encapsulation cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_a_first_example_code_encapsulation.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_a_first_example_code_encapsulation.dir/link.d CMakeFiles/demo_tutorial_a_first_example_code_encapsulation.dir/tutorial/a_first_example/code_encapsulation.cpp.o -o ../bin/demo_tutorial_a_first_example_code_encapsulation -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 45%] Built target demo_tutorial_a_first_example_code_encapsulation make -f demos/CMakeFiles/demo_tutorial_a_first_example_solution_3.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_solution_3.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_a_first_example_solution_3.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_a_first_example_solution_3.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_solution_3.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 45%] Building CXX object demos/CMakeFiles/demo_tutorial_a_first_example_solution_3.dir/tutorial/a_first_example/solution_3.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_a_first_example_solution_3.dir/tutorial/a_first_example/solution_3.cpp.o -MF CMakeFiles/demo_tutorial_a_first_example_solution_3.dir/tutorial/a_first_example/solution_3.cpp.o.d -o CMakeFiles/demo_tutorial_a_first_example_solution_3.dir/tutorial/a_first_example/solution_3.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/a_first_example/solution_3.cpp [ 45%] Linking CXX executable ../bin/demo_tutorial_a_first_example_example_tags_for_print cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_a_first_example_example_tags_for_print.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_a_first_example_example_tags_for_print.dir/link.d CMakeFiles/demo_tutorial_a_first_example_example_tags_for_print.dir/tutorial/a_first_example/example_tags_for_print.cpp.o -o ../bin/demo_tutorial_a_first_example_example_tags_for_print -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 45%] Built target demo_tutorial_a_first_example_example_tags_for_print make -f demos/CMakeFiles/demo_tutorial_a_first_example_solution_4.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_solution_4.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_a_first_example_solution_4.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_a_first_example_solution_4.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_solution_4.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 45%] Building CXX object demos/CMakeFiles/demo_tutorial_a_first_example_solution_4.dir/tutorial/a_first_example/solution_4.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_a_first_example_solution_4.dir/tutorial/a_first_example/solution_4.cpp.o -MF CMakeFiles/demo_tutorial_a_first_example_solution_4.dir/tutorial/a_first_example/solution_4.cpp.o.d -o CMakeFiles/demo_tutorial_a_first_example_solution_4.dir/tutorial/a_first_example/solution_4.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/a_first_example/solution_4.cpp [ 46%] Linking CXX executable ../bin/demo_tutorial_a_first_example_final_result cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_a_first_example_final_result.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_a_first_example_final_result.dir/link.d CMakeFiles/demo_tutorial_a_first_example_final_result.dir/tutorial/a_first_example/final_result.cpp.o -o ../bin/demo_tutorial_a_first_example_final_result -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 46%] Built target demo_tutorial_a_first_example_final_result make -f demos/CMakeFiles/demo_tutorial_a_first_example_solution_4_templateSubclassing.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_solution_4_templateSubclassing.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_a_first_example_solution_4_templateSubclassing.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_a_first_example_solution_4_templateSubclassing.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_solution_4_templateSubclassing.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 46%] Building CXX object demos/CMakeFiles/demo_tutorial_a_first_example_solution_4_templateSubclassing.dir/tutorial/a_first_example/solution_4_templateSubclassing.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_a_first_example_solution_4_templateSubclassing.dir/tutorial/a_first_example/solution_4_templateSubclassing.cpp.o -MF CMakeFiles/demo_tutorial_a_first_example_solution_4_templateSubclassing.dir/tutorial/a_first_example/solution_4_templateSubclassing.cpp.o.d -o CMakeFiles/demo_tutorial_a_first_example_solution_4_templateSubclassing.dir/tutorial/a_first_example/solution_4_templateSubclassing.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/a_first_example/solution_4_templateSubclassing.cpp [ 46%] Linking CXX executable ../bin/demo_tutorial_a_first_example_solution_1 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_a_first_example_solution_1.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. [ 46%] Linking CXX executable ../bin/demo_dox_store_store_example cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_dox_store_store_example.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_a_first_example_solution_1.dir/link.d CMakeFiles/demo_tutorial_a_first_example_solution_1.dir/tutorial/a_first_example/solution_1.cpp.o -o ../bin/demo_tutorial_a_first_example_solution_1 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 46%] Built target demo_tutorial_a_first_example_solution_1 make -f demos/CMakeFiles/demo_tutorial_a_first_example_solution_5.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_solution_5.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_a_first_example_solution_5.dir/DependInfo.cmake "--color=" /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_a_first_example_solution_5.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_solution_5.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 46%] Building CXX object demos/CMakeFiles/demo_tutorial_a_first_example_solution_5.dir/tutorial/a_first_example/solution_5.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_a_first_example_solution_5.dir/tutorial/a_first_example/solution_5.cpp.o -MF CMakeFiles/demo_tutorial_a_first_example_solution_5.dir/tutorial/a_first_example/solution_5.cpp.o.d -o CMakeFiles/demo_tutorial_a_first_example_solution_5.dir/tutorial/a_first_example/solution_5.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/a_first_example/solution_5.cpp /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_dox_store_store_example.dir/link.d CMakeFiles/demo_dox_store_store_example.dir/dox/store/store_example.cpp.o -o ../bin/demo_dox_store_store_example -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 46%] Built target demo_dox_store_store_example make -f demos/CMakeFiles/demo_tutorial_a_first_example_solution_6.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_solution_6.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_a_first_example_solution_6.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_a_first_example_solution_6.dir/build.make demos/CMakeFiles/demo_tutorial_a_first_example_solution_6.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 46%] Building CXX object demos/CMakeFiles/demo_tutorial_a_first_example_solution_6.dir/tutorial/a_first_example/solution_6.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_a_first_example_solution_6.dir/tutorial/a_first_example/solution_6.cpp.o -MF CMakeFiles/demo_tutorial_a_first_example_solution_6.dir/tutorial/a_first_example/solution_6.cpp.o.d -o CMakeFiles/demo_tutorial_a_first_example_solution_6.dir/tutorial/a_first_example/solution_6.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/a_first_example/solution_6.cpp [ 46%] Linking CXX executable ../bin/demo_tutorial_a_first_example_solution_2 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_a_first_example_solution_2.dir/link.txt --verbose=1 [ 46%] Linking CXX executable ../bin/demo_tutorial_a_first_example_solution_3 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_a_first_example_solution_3.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_a_first_example_solution_2.dir/link.d CMakeFiles/demo_tutorial_a_first_example_solution_2.dir/tutorial/a_first_example/solution_2.cpp.o -o ../bin/demo_tutorial_a_first_example_solution_2 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 46%] Built target demo_tutorial_a_first_example_solution_2 make -f demos/CMakeFiles/demo_tutorial_alignment_align.dir/build.make demos/CMakeFiles/demo_tutorial_alignment_align.dir/depend /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_alignment_align.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_alignment_align.dir/build.make demos/CMakeFiles/demo_tutorial_alignment_align.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 46%] Building CXX object demos/CMakeFiles/demo_tutorial_alignment_align.dir/tutorial/alignment/align.cpp.o /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_a_first_example_solution_3.dir/link.d CMakeFiles/demo_tutorial_a_first_example_solution_3.dir/tutorial/a_first_example/solution_3.cpp.o -o ../bin/demo_tutorial_a_first_example_solution_3 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_alignment_align.dir/tutorial/alignment/align.cpp.o -MF CMakeFiles/demo_tutorial_alignment_align.dir/tutorial/alignment/align.cpp.o.d -o CMakeFiles/demo_tutorial_alignment_align.dir/tutorial/alignment/align.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/alignment/align.cpp make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 46%] Built target demo_tutorial_a_first_example_solution_3 make -f demos/CMakeFiles/demo_tutorial_alignment_align_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_alignment_align_assignment1.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_alignment_align_assignment1.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_alignment_align_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_alignment_align_assignment1.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 46%] Building CXX object demos/CMakeFiles/demo_tutorial_alignment_align_assignment1.dir/tutorial/alignment/align_assignment1.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_alignment_align_assignment1.dir/tutorial/alignment/align_assignment1.cpp.o -MF CMakeFiles/demo_tutorial_alignment_align_assignment1.dir/tutorial/alignment/align_assignment1.cpp.o.d -o CMakeFiles/demo_tutorial_alignment_align_assignment1.dir/tutorial/alignment/align_assignment1.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/alignment/align_assignment1.cpp [ 46%] Linking CXX executable ../bin/demo_tutorial_a_first_example_solution_4 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_a_first_example_solution_4.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_a_first_example_solution_4.dir/link.d CMakeFiles/demo_tutorial_a_first_example_solution_4.dir/tutorial/a_first_example/solution_4.cpp.o -o ../bin/demo_tutorial_a_first_example_solution_4 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 46%] Built target demo_tutorial_a_first_example_solution_4 make -f demos/CMakeFiles/demo_tutorial_alignment_graph.dir/build.make demos/CMakeFiles/demo_tutorial_alignment_graph.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_alignment_graph.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_alignment_graph.dir/build.make demos/CMakeFiles/demo_tutorial_alignment_graph.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 46%] Building CXX object demos/CMakeFiles/demo_tutorial_alignment_graph.dir/tutorial/alignment/graph.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_alignment_graph.dir/tutorial/alignment/graph.cpp.o -MF CMakeFiles/demo_tutorial_alignment_graph.dir/tutorial/alignment/graph.cpp.o.d -o CMakeFiles/demo_tutorial_alignment_graph.dir/tutorial/alignment/graph.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/alignment/graph.cpp [ 46%] Linking CXX executable ../bin/demo_tabix_io_tabix_vcf cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tabix_io_tabix_vcf.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tabix_io_tabix_vcf.dir/link.d CMakeFiles/demo_tabix_io_tabix_vcf.dir/tabix_io/tabix_vcf.cpp.o -o ../bin/demo_tabix_io_tabix_vcf -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 46%] Built target demo_tabix_io_tabix_vcf make -f demos/CMakeFiles/demo_tutorial_alignment_graph_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_alignment_graph_assignment1.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_alignment_graph_assignment1.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_alignment_graph_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_alignment_graph_assignment1.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 46%] Building CXX object demos/CMakeFiles/demo_tutorial_alignment_graph_assignment1.dir/tutorial/alignment/graph_assignment1.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_alignment_graph_assignment1.dir/tutorial/alignment/graph_assignment1.cpp.o -MF CMakeFiles/demo_tutorial_alignment_graph_assignment1.dir/tutorial/alignment/graph_assignment1.cpp.o.d -o CMakeFiles/demo_tutorial_alignment_graph_assignment1.dir/tutorial/alignment/graph_assignment1.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/alignment/graph_assignment1.cpp [ 46%] Linking CXX executable ../bin/demo_tutorial_a_first_example_solution_4_templateSubclassing cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_a_first_example_solution_4_templateSubclassing.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_a_first_example_solution_4_templateSubclassing.dir/link.d CMakeFiles/demo_tutorial_a_first_example_solution_4_templateSubclassing.dir/tutorial/a_first_example/solution_4_templateSubclassing.cpp.o -o ../bin/demo_tutorial_a_first_example_solution_4_templateSubclassing -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 46%] Built target demo_tutorial_a_first_example_solution_4_templateSubclassing make -f demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_affine_dgs.dir/build.make demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_affine_dgs.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_affine_dgs.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_affine_dgs.dir/build.make demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_affine_dgs.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 46%] Building CXX object demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_affine_dgs.dir/tutorial/alignment/scoring_scheme_affine_dgs.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_affine_dgs.dir/tutorial/alignment/scoring_scheme_affine_dgs.cpp.o -MF CMakeFiles/demo_tutorial_alignment_scoring_scheme_affine_dgs.dir/tutorial/alignment/scoring_scheme_affine_dgs.cpp.o.d -o CMakeFiles/demo_tutorial_alignment_scoring_scheme_affine_dgs.dir/tutorial/alignment/scoring_scheme_affine_dgs.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/alignment/scoring_scheme_affine_dgs.cpp [ 47%] Linking CXX executable ../bin/demo_tutorial_a_first_example_solution_5 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_a_first_example_solution_5.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_a_first_example_solution_5.dir/link.d CMakeFiles/demo_tutorial_a_first_example_solution_5.dir/tutorial/a_first_example/solution_5.cpp.o -o ../bin/demo_tutorial_a_first_example_solution_5 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 47%] Built target demo_tutorial_a_first_example_solution_5 make -f demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_matrix.dir/build.make demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_matrix.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_matrix.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_matrix.dir/build.make demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_matrix.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 48%] Building CXX object demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_matrix.dir/tutorial/alignment/scoring_scheme_matrix.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_matrix.dir/tutorial/alignment/scoring_scheme_matrix.cpp.o -MF CMakeFiles/demo_tutorial_alignment_scoring_scheme_matrix.dir/tutorial/alignment/scoring_scheme_matrix.cpp.o.d -o CMakeFiles/demo_tutorial_alignment_scoring_scheme_matrix.dir/tutorial/alignment/scoring_scheme_matrix.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/alignment/scoring_scheme_matrix.cpp [ 48%] Linking CXX executable ../bin/demo_tutorial_a_first_example_solution_6 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_a_first_example_solution_6.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_a_first_example_solution_6.dir/link.d CMakeFiles/demo_tutorial_a_first_example_solution_6.dir/tutorial/a_first_example/solution_6.cpp.o -o ../bin/demo_tutorial_a_first_example_solution_6 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 48%] Built target demo_tutorial_a_first_example_solution_6 make -f demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_simple.dir/build.make demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_simple.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_simple.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_simple.dir/build.make demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_simple.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 48%] Building CXX object demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_simple.dir/tutorial/alignment/scoring_scheme_simple.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_alignment_scoring_scheme_simple.dir/tutorial/alignment/scoring_scheme_simple.cpp.o -MF CMakeFiles/demo_tutorial_alignment_scoring_scheme_simple.dir/tutorial/alignment/scoring_scheme_simple.cpp.o.d -o CMakeFiles/demo_tutorial_alignment_scoring_scheme_simple.dir/tutorial/alignment/scoring_scheme_simple.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/alignment/scoring_scheme_simple.cpp [ 48%] Linking CXX executable ../bin/demo_tutorial_alignment_align_assignment1 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_alignment_align_assignment1.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_alignment_align_assignment1.dir/link.d CMakeFiles/demo_tutorial_alignment_align_assignment1.dir/tutorial/alignment/align_assignment1.cpp.o -o ../bin/demo_tutorial_alignment_align_assignment1 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 48%] Built target demo_tutorial_alignment_align_assignment1 make -f demos/CMakeFiles/demo_tutorial_alphabets_assignment_1.dir/build.make demos/CMakeFiles/demo_tutorial_alphabets_assignment_1.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_alphabets_assignment_1.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_alphabets_assignment_1.dir/build.make demos/CMakeFiles/demo_tutorial_alphabets_assignment_1.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 48%] Building CXX object demos/CMakeFiles/demo_tutorial_alphabets_assignment_1.dir/tutorial/alphabets/assignment_1.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_alphabets_assignment_1.dir/tutorial/alphabets/assignment_1.cpp.o -MF CMakeFiles/demo_tutorial_alphabets_assignment_1.dir/tutorial/alphabets/assignment_1.cpp.o.d -o CMakeFiles/demo_tutorial_alphabets_assignment_1.dir/tutorial/alphabets/assignment_1.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/alphabets/assignment_1.cpp [ 48%] Linking CXX executable ../bin/demo_tutorial_alignment_align cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_alignment_align.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_alignment_align.dir/link.d CMakeFiles/demo_tutorial_alignment_align.dir/tutorial/alignment/align.cpp.o -o ../bin/demo_tutorial_alignment_align -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 48%] Built target demo_tutorial_alignment_align make -f demos/CMakeFiles/demo_tutorial_alphabets_assignment_1_solution.dir/build.make demos/CMakeFiles/demo_tutorial_alphabets_assignment_1_solution.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_alphabets_assignment_1_solution.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_alphabets_assignment_1_solution.dir/build.make demos/CMakeFiles/demo_tutorial_alphabets_assignment_1_solution.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 48%] Building CXX object demos/CMakeFiles/demo_tutorial_alphabets_assignment_1_solution.dir/tutorial/alphabets/assignment_1_solution.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_alphabets_assignment_1_solution.dir/tutorial/alphabets/assignment_1_solution.cpp.o -MF CMakeFiles/demo_tutorial_alphabets_assignment_1_solution.dir/tutorial/alphabets/assignment_1_solution.cpp.o.d -o CMakeFiles/demo_tutorial_alphabets_assignment_1_solution.dir/tutorial/alphabets/assignment_1_solution.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/alphabets/assignment_1_solution.cpp [ 48%] Linking CXX executable ../bin/demo_tutorial_alphabets_assignment_1 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_alphabets_assignment_1.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_alphabets_assignment_1.dir/link.d CMakeFiles/demo_tutorial_alphabets_assignment_1.dir/tutorial/alphabets/assignment_1.cpp.o -o ../bin/demo_tutorial_alphabets_assignment_1 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 48%] Built target demo_tutorial_alphabets_assignment_1 make -f demos/CMakeFiles/demo_tutorial_alphabets_example_bitsPerValue.dir/build.make demos/CMakeFiles/demo_tutorial_alphabets_example_bitsPerValue.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_alphabets_example_bitsPerValue.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_alphabets_example_bitsPerValue.dir/build.make demos/CMakeFiles/demo_tutorial_alphabets_example_bitsPerValue.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 48%] Building CXX object demos/CMakeFiles/demo_tutorial_alphabets_example_bitsPerValue.dir/tutorial/alphabets/example_bitsPerValue.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_alphabets_example_bitsPerValue.dir/tutorial/alphabets/example_bitsPerValue.cpp.o -MF CMakeFiles/demo_tutorial_alphabets_example_bitsPerValue.dir/tutorial/alphabets/example_bitsPerValue.cpp.o.d -o CMakeFiles/demo_tutorial_alphabets_example_bitsPerValue.dir/tutorial/alphabets/example_bitsPerValue.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/alphabets/example_bitsPerValue.cpp [ 48%] Linking CXX executable ../bin/demo_tutorial_alphabets_assignment_1_solution cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_alphabets_assignment_1_solution.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_alphabets_assignment_1_solution.dir/link.d CMakeFiles/demo_tutorial_alphabets_assignment_1_solution.dir/tutorial/alphabets/assignment_1_solution.cpp.o -o ../bin/demo_tutorial_alphabets_assignment_1_solution -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a [ 48%] Linking CXX executable ../bin/demo_tutorial_alphabets_example_bitsPerValue make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_alphabets_example_bitsPerValue.dir/link.txt --verbose=1 [ 48%] Built target demo_tutorial_alphabets_assignment_1_solution make -f demos/CMakeFiles/demo_tutorial_alphabets_example_ordValue.dir/build.make demos/CMakeFiles/demo_tutorial_alphabets_example_ordValue.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_alphabets_example_ordValue.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_alphabets_example_ordValue.dir/build.make demos/CMakeFiles/demo_tutorial_alphabets_example_ordValue.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. [ 48%] Building CXX object demos/CMakeFiles/demo_tutorial_alphabets_example_ordValue.dir/tutorial/alphabets/example_ordValue.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_alphabets_example_ordValue.dir/tutorial/alphabets/example_ordValue.cpp.o -MF CMakeFiles/demo_tutorial_alphabets_example_ordValue.dir/tutorial/alphabets/example_ordValue.cpp.o.d -o CMakeFiles/demo_tutorial_alphabets_example_ordValue.dir/tutorial/alphabets/example_ordValue.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/alphabets/example_ordValue.cpp /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_alphabets_example_bitsPerValue.dir/link.d CMakeFiles/demo_tutorial_alphabets_example_bitsPerValue.dir/tutorial/alphabets/example_bitsPerValue.cpp.o -o ../bin/demo_tutorial_alphabets_example_bitsPerValue -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 48%] Built target demo_tutorial_alphabets_example_bitsPerValue make -f demos/CMakeFiles/demo_tutorial_alphabets_example_size.dir/build.make demos/CMakeFiles/demo_tutorial_alphabets_example_size.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_alphabets_example_size.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_alphabets_example_size.dir/build.make demos/CMakeFiles/demo_tutorial_alphabets_example_size.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 50%] Building CXX object demos/CMakeFiles/demo_tutorial_alphabets_example_size.dir/tutorial/alphabets/example_size.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_alphabets_example_size.dir/tutorial/alphabets/example_size.cpp.o -MF CMakeFiles/demo_tutorial_alphabets_example_size.dir/tutorial/alphabets/example_size.cpp.o.d -o CMakeFiles/demo_tutorial_alphabets_example_size.dir/tutorial/alphabets/example_size.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/alphabets/example_size.cpp [ 50%] Linking CXX executable ../bin/demo_tutorial_alphabets_example_ordValue cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_alphabets_example_ordValue.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_alphabets_example_ordValue.dir/link.d CMakeFiles/demo_tutorial_alphabets_example_ordValue.dir/tutorial/alphabets/example_ordValue.cpp.o -o ../bin/demo_tutorial_alphabets_example_ordValue -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 50%] Built target demo_tutorial_alphabets_example_ordValue make -f demos/CMakeFiles/demo_tutorial_background_and_motivation_example.dir/build.make demos/CMakeFiles/demo_tutorial_background_and_motivation_example.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_background_and_motivation_example.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_background_and_motivation_example.dir/build.make demos/CMakeFiles/demo_tutorial_background_and_motivation_example.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 50%] Building CXX object demos/CMakeFiles/demo_tutorial_background_and_motivation_example.dir/tutorial/background_and_motivation/example.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_background_and_motivation_example.dir/tutorial/background_and_motivation/example.cpp.o -MF CMakeFiles/demo_tutorial_background_and_motivation_example.dir/tutorial/background_and_motivation/example.cpp.o.d -o CMakeFiles/demo_tutorial_background_and_motivation_example.dir/tutorial/background_and_motivation/example.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/background_and_motivation/example.cpp [ 50%] Linking CXX executable ../bin/demo_tutorial_alphabets_example_size cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_alphabets_example_size.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_alphabets_example_size.dir/link.d CMakeFiles/demo_tutorial_alphabets_example_size.dir/tutorial/alphabets/example_size.cpp.o -o ../bin/demo_tutorial_alphabets_example_size -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 50%] Built target demo_tutorial_alphabets_example_size make -f demos/CMakeFiles/demo_tutorial_basic_techniques_base.dir/build.make demos/CMakeFiles/demo_tutorial_basic_techniques_base.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_basic_techniques_base.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_basic_techniques_base.dir/build.make demos/CMakeFiles/demo_tutorial_basic_techniques_base.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 50%] Building CXX object demos/CMakeFiles/demo_tutorial_basic_techniques_base.dir/tutorial/basic_techniques/base.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_basic_techniques_base.dir/tutorial/basic_techniques/base.cpp.o -MF CMakeFiles/demo_tutorial_basic_techniques_base.dir/tutorial/basic_techniques/base.cpp.o.d -o CMakeFiles/demo_tutorial_basic_techniques_base.dir/tutorial/basic_techniques/base.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/basic_techniques/base.cpp [ 50%] Linking CXX executable ../bin/demo_tutorial_background_and_motivation_example cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_background_and_motivation_example.dir/link.txt --verbose=1 [ 50%] Linking CXX executable ../bin/demo_tutorial_alignment_scoring_scheme_affine_dgs cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_alignment_scoring_scheme_affine_dgs.dir/link.txt --verbose=1 [ 50%] Linking CXX executable ../bin/demo_tutorial_basic_techniques_base /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_basic_techniques_base.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_background_and_motivation_example.dir/link.d CMakeFiles/demo_tutorial_background_and_motivation_example.dir/tutorial/background_and_motivation/example.cpp.o -o ../bin/demo_tutorial_background_and_motivation_example -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. [ 50%] Built target demo_tutorial_background_and_motivation_example make -f demos/CMakeFiles/demo_tutorial_basics_allocator.dir/build.make demos/CMakeFiles/demo_tutorial_basics_allocator.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_basics_allocator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_basics_allocator.dir/build.make demos/CMakeFiles/demo_tutorial_basics_allocator.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. [ 50%] Building CXX object demos/CMakeFiles/demo_tutorial_basics_allocator.dir/tutorial/basics/allocator.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_basics_allocator.dir/tutorial/basics/allocator.cpp.o -MF CMakeFiles/demo_tutorial_basics_allocator.dir/tutorial/basics/allocator.cpp.o.d -o CMakeFiles/demo_tutorial_basics_allocator.dir/tutorial/basics/allocator.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/basics/allocator.cpp /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_alignment_scoring_scheme_affine_dgs.dir/link.d CMakeFiles/demo_tutorial_alignment_scoring_scheme_affine_dgs.dir/tutorial/alignment/scoring_scheme_affine_dgs.cpp.o -o ../bin/demo_tutorial_alignment_scoring_scheme_affine_dgs -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 50%] Built target demo_tutorial_alignment_scoring_scheme_affine_dgs make -f demos/CMakeFiles/demo_tutorial_basics_base.dir/build.make demos/CMakeFiles/demo_tutorial_basics_base.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_basics_base.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_basics_base.dir/build.make demos/CMakeFiles/demo_tutorial_basics_base.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_basic_techniques_base.dir/link.d CMakeFiles/demo_tutorial_basic_techniques_base.dir/tutorial/basic_techniques/base.cpp.o -o ../bin/demo_tutorial_basic_techniques_base -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 50%] Building CXX object demos/CMakeFiles/demo_tutorial_basics_base.dir/tutorial/basics/base.cpp.o [ 50%] Built target demo_tutorial_basic_techniques_base cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_basics_base.dir/tutorial/basics/base.cpp.o -MF CMakeFiles/demo_tutorial_basics_base.dir/tutorial/basics/base.cpp.o.d -o CMakeFiles/demo_tutorial_basics_base.dir/tutorial/basics/base.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/basics/base.cpp make -f 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'/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 50%] Linking CXX executable ../bin/demo_tutorial_alignment_scoring_scheme_matrix cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_alignment_scoring_scheme_matrix.dir/link.txt --verbose=1 [ 50%] Building CXX object demos/CMakeFiles/demo_tutorial_basics_show_alphabets.dir/tutorial/basics/show_alphabets.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_basics_show_alphabets.dir/tutorial/basics/show_alphabets.cpp.o -MF CMakeFiles/demo_tutorial_basics_show_alphabets.dir/tutorial/basics/show_alphabets.cpp.o.d -o CMakeFiles/demo_tutorial_basics_show_alphabets.dir/tutorial/basics/show_alphabets.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/basics/show_alphabets.cpp [ 50%] Linking CXX executable ../bin/demo_tutorial_alignment_graph_assignment1 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_alignment_graph_assignment1.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. [ 50%] Linking CXX executable ../bin/demo_tutorial_alignment_graph cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_alignment_graph.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_alignment_scoring_scheme_matrix.dir/link.d CMakeFiles/demo_tutorial_alignment_scoring_scheme_matrix.dir/tutorial/alignment/scoring_scheme_matrix.cpp.o -o ../bin/demo_tutorial_alignment_scoring_scheme_matrix -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 50%] Built target demo_tutorial_alignment_scoring_scheme_matrix make -f demos/CMakeFiles/demo_tutorial_basics_strings.dir/build.make demos/CMakeFiles/demo_tutorial_basics_strings.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_basics_strings.dir/DependInfo.cmake "--color=" /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_basics_strings.dir/build.make demos/CMakeFiles/demo_tutorial_basics_strings.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_alignment_graph_assignment1.dir/link.d CMakeFiles/demo_tutorial_alignment_graph_assignment1.dir/tutorial/alignment/graph_assignment1.cpp.o -o ../bin/demo_tutorial_alignment_graph_assignment1 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 51%] Building CXX object demos/CMakeFiles/demo_tutorial_basics_strings.dir/tutorial/basics/strings.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_basics_strings.dir/tutorial/basics/strings.cpp.o -MF CMakeFiles/demo_tutorial_basics_strings.dir/tutorial/basics/strings.cpp.o.d -o CMakeFiles/demo_tutorial_basics_strings.dir/tutorial/basics/strings.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/basics/strings.cpp [ 51%] Linking CXX executable ../bin/demo_tutorial_alignment_scoring_scheme_simple cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_alignment_scoring_scheme_simple.dir/link.txt --verbose=1 [ 51%] Built target demo_tutorial_alignment_graph_assignment1 make -f demos/CMakeFiles/demo_tutorial_bed_io_base.dir/build.make demos/CMakeFiles/demo_tutorial_bed_io_base.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_bed_io_base.dir/DependInfo.cmake "--color=" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_alignment_graph.dir/link.d CMakeFiles/demo_tutorial_alignment_graph.dir/tutorial/alignment/graph.cpp.o -o ../bin/demo_tutorial_alignment_graph -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 51%] Built target demo_tutorial_alignment_graph make -f demos/CMakeFiles/demo_tutorial_bed_io_example1.dir/build.make demos/CMakeFiles/demo_tutorial_bed_io_example1.dir/depend make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_bed_io_base.dir/build.make demos/CMakeFiles/demo_tutorial_bed_io_base.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_bed_io_example1.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 51%] Building CXX object demos/CMakeFiles/demo_tutorial_bed_io_base.dir/tutorial/bed_io/base.cpp.o make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_bed_io_example1.dir/build.make demos/CMakeFiles/demo_tutorial_bed_io_example1.dir/build cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_bed_io_base.dir/tutorial/bed_io/base.cpp.o -MF CMakeFiles/demo_tutorial_bed_io_base.dir/tutorial/bed_io/base.cpp.o.d -o CMakeFiles/demo_tutorial_bed_io_base.dir/tutorial/bed_io/base.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/bed_io/base.cpp make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 51%] Building CXX object demos/CMakeFiles/demo_tutorial_bed_io_example1.dir/tutorial/bed_io/example1.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_bed_io_example1.dir/tutorial/bed_io/example1.cpp.o -MF CMakeFiles/demo_tutorial_bed_io_example1.dir/tutorial/bed_io/example1.cpp.o.d -o CMakeFiles/demo_tutorial_bed_io_example1.dir/tutorial/bed_io/example1.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/bed_io/example1.cpp /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_alignment_scoring_scheme_simple.dir/link.d CMakeFiles/demo_tutorial_alignment_scoring_scheme_simple.dir/tutorial/alignment/scoring_scheme_simple.cpp.o -o ../bin/demo_tutorial_alignment_scoring_scheme_simple -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 51%] Built target demo_tutorial_alignment_scoring_scheme_simple make -f demos/CMakeFiles/demo_tutorial_bed_io_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_bed_io_solution1.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_bed_io_solution1.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_bed_io_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_bed_io_solution1.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 51%] Building CXX object demos/CMakeFiles/demo_tutorial_bed_io_solution1.dir/tutorial/bed_io/solution1.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_bed_io_solution1.dir/tutorial/bed_io/solution1.cpp.o -MF CMakeFiles/demo_tutorial_bed_io_solution1.dir/tutorial/bed_io/solution1.cpp.o.d -o CMakeFiles/demo_tutorial_bed_io_solution1.dir/tutorial/bed_io/solution1.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/bed_io/solution1.cpp [ 51%] Linking CXX executable ../bin/demo_tutorial_basics_show_alphabets cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_basics_show_alphabets.dir/link.txt --verbose=1 [ 51%] Linking CXX executable ../bin/demo_tutorial_basics_allocator cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_basics_allocator.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_basics_allocator.dir/link.d CMakeFiles/demo_tutorial_basics_allocator.dir/tutorial/basics/allocator.cpp.o -o ../bin/demo_tutorial_basics_allocator -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_basics_show_alphabets.dir/link.d CMakeFiles/demo_tutorial_basics_show_alphabets.dir/tutorial/basics/show_alphabets.cpp.o -o ../bin/demo_tutorial_basics_show_alphabets -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a [ 51%] Built target demo_tutorial_basics_allocator make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_bed_io_solution2.dir/build.make demos/CMakeFiles/demo_tutorial_bed_io_solution2.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_bed_io_solution2.dir/DependInfo.cmake "--color=" [ 51%] Built target demo_tutorial_basics_show_alphabets make -f demos/CMakeFiles/demo_tutorial_bed_io_solution3.dir/build.make demos/CMakeFiles/demo_tutorial_bed_io_solution3.dir/depend make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_bed_io_solution2.dir/build.make demos/CMakeFiles/demo_tutorial_bed_io_solution2.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_bed_io_solution3.dir/DependInfo.cmake "--color=" [ 51%] Building CXX object demos/CMakeFiles/demo_tutorial_bed_io_solution2.dir/tutorial/bed_io/solution2.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_bed_io_solution2.dir/tutorial/bed_io/solution2.cpp.o -MF CMakeFiles/demo_tutorial_bed_io_solution2.dir/tutorial/bed_io/solution2.cpp.o.d -o CMakeFiles/demo_tutorial_bed_io_solution2.dir/tutorial/bed_io/solution2.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/bed_io/solution2.cpp make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_bed_io_solution3.dir/build.make demos/CMakeFiles/demo_tutorial_bed_io_solution3.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 51%] Building CXX object demos/CMakeFiles/demo_tutorial_bed_io_solution3.dir/tutorial/bed_io/solution3.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_bed_io_solution3.dir/tutorial/bed_io/solution3.cpp.o -MF CMakeFiles/demo_tutorial_bed_io_solution3.dir/tutorial/bed_io/solution3.cpp.o.d -o CMakeFiles/demo_tutorial_bed_io_solution3.dir/tutorial/bed_io/solution3.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/bed_io/solution3.cpp [ 51%] Linking CXX executable ../bin/demo_tutorial_basics_base cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_basics_base.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_basics_base.dir/link.d CMakeFiles/demo_tutorial_basics_base.dir/tutorial/basics/base.cpp.o -o ../bin/demo_tutorial_basics_base -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 51%] Built target demo_tutorial_basics_base make -f demos/CMakeFiles/demo_tutorial_blast_io_read_assignment.dir/build.make demos/CMakeFiles/demo_tutorial_blast_io_read_assignment.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_blast_io_read_assignment.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_blast_io_read_assignment.dir/build.make demos/CMakeFiles/demo_tutorial_blast_io_read_assignment.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 52%] Building CXX object demos/CMakeFiles/demo_tutorial_blast_io_read_assignment.dir/tutorial/blast_io/read_assignment.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_blast_io_read_assignment.dir/tutorial/blast_io/read_assignment.cpp.o -MF CMakeFiles/demo_tutorial_blast_io_read_assignment.dir/tutorial/blast_io/read_assignment.cpp.o.d -o CMakeFiles/demo_tutorial_blast_io_read_assignment.dir/tutorial/blast_io/read_assignment.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/blast_io/read_assignment.cpp [ 52%] Linking CXX executable ../bin/demo_tutorial_bed_io_base cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_bed_io_base.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_bed_io_base.dir/link.d CMakeFiles/demo_tutorial_bed_io_base.dir/tutorial/bed_io/base.cpp.o -o ../bin/demo_tutorial_bed_io_base -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 52%] Built target demo_tutorial_bed_io_base make -f demos/CMakeFiles/demo_tutorial_blast_io_write_assignment.dir/build.make demos/CMakeFiles/demo_tutorial_blast_io_write_assignment.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_blast_io_write_assignment.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_blast_io_write_assignment.dir/build.make demos/CMakeFiles/demo_tutorial_blast_io_write_assignment.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 52%] Building CXX object demos/CMakeFiles/demo_tutorial_blast_io_write_assignment.dir/tutorial/blast_io/write_assignment.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_blast_io_write_assignment.dir/tutorial/blast_io/write_assignment.cpp.o -MF CMakeFiles/demo_tutorial_blast_io_write_assignment.dir/tutorial/blast_io/write_assignment.cpp.o.d -o CMakeFiles/demo_tutorial_blast_io_write_assignment.dir/tutorial/blast_io/write_assignment.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/blast_io/write_assignment.cpp [ 52%] Linking CXX executable ../bin/demo_tutorial_basics_strings cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_basics_strings.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_basics_strings.dir/link.d CMakeFiles/demo_tutorial_basics_strings.dir/tutorial/basics/strings.cpp.o -o ../bin/demo_tutorial_basics_strings -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 52%] Built target demo_tutorial_basics_strings make -f demos/CMakeFiles/demo_tutorial_consensus_alignment_with_positions.dir/build.make demos/CMakeFiles/demo_tutorial_consensus_alignment_with_positions.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_consensus_alignment_with_positions.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_consensus_alignment_with_positions.dir/build.make demos/CMakeFiles/demo_tutorial_consensus_alignment_with_positions.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 52%] Building CXX object demos/CMakeFiles/demo_tutorial_consensus_alignment_with_positions.dir/tutorial/consensus_alignment/with_positions.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_consensus_alignment_with_positions.dir/tutorial/consensus_alignment/with_positions.cpp.o -MF CMakeFiles/demo_tutorial_consensus_alignment_with_positions.dir/tutorial/consensus_alignment/with_positions.cpp.o.d -o CMakeFiles/demo_tutorial_consensus_alignment_with_positions.dir/tutorial/consensus_alignment/with_positions.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/consensus_alignment/with_positions.cpp [ 52%] Linking CXX executable ../bin/demo_tutorial_bed_io_solution3 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_bed_io_solution3.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_bed_io_solution3.dir/link.d CMakeFiles/demo_tutorial_bed_io_solution3.dir/tutorial/bed_io/solution3.cpp.o -o ../bin/demo_tutorial_bed_io_solution3 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 52%] Built target demo_tutorial_bed_io_solution3 make -f demos/CMakeFiles/demo_tutorial_consensus_alignment_without_positions.dir/build.make demos/CMakeFiles/demo_tutorial_consensus_alignment_without_positions.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_consensus_alignment_without_positions.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_consensus_alignment_without_positions.dir/build.make demos/CMakeFiles/demo_tutorial_consensus_alignment_without_positions.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 52%] Building CXX object demos/CMakeFiles/demo_tutorial_consensus_alignment_without_positions.dir/tutorial/consensus_alignment/without_positions.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_consensus_alignment_without_positions.dir/tutorial/consensus_alignment/without_positions.cpp.o -MF CMakeFiles/demo_tutorial_consensus_alignment_without_positions.dir/tutorial/consensus_alignment/without_positions.cpp.o.d -o CMakeFiles/demo_tutorial_consensus_alignment_without_positions.dir/tutorial/consensus_alignment/without_positions.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/consensus_alignment/without_positions.cpp [ 52%] Linking CXX executable ../bin/demo_tutorial_bed_io_solution1 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_bed_io_solution1.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_bed_io_solution1.dir/link.d CMakeFiles/demo_tutorial_bed_io_solution1.dir/tutorial/bed_io/solution1.cpp.o -o ../bin/demo_tutorial_bed_io_solution1 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 52%] Built target demo_tutorial_bed_io_solution1 make -f demos/CMakeFiles/demo_tutorial_file_io_overview_example1.dir/build.make demos/CMakeFiles/demo_tutorial_file_io_overview_example1.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_file_io_overview_example1.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_file_io_overview_example1.dir/build.make demos/CMakeFiles/demo_tutorial_file_io_overview_example1.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 52%] Building CXX object demos/CMakeFiles/demo_tutorial_file_io_overview_example1.dir/tutorial/file_io_overview/example1.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_file_io_overview_example1.dir/tutorial/file_io_overview/example1.cpp.o -MF CMakeFiles/demo_tutorial_file_io_overview_example1.dir/tutorial/file_io_overview/example1.cpp.o.d -o CMakeFiles/demo_tutorial_file_io_overview_example1.dir/tutorial/file_io_overview/example1.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/file_io_overview/example1.cpp [ 52%] Linking CXX executable ../bin/demo_tutorial_bed_io_example1 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_bed_io_example1.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_bed_io_example1.dir/link.d CMakeFiles/demo_tutorial_bed_io_example1.dir/tutorial/bed_io/example1.cpp.o -o ../bin/demo_tutorial_bed_io_example1 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 52%] Built target demo_tutorial_bed_io_example1 make -f demos/CMakeFiles/demo_tutorial_file_io_overview_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_file_io_overview_solution1.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_file_io_overview_solution1.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_file_io_overview_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_file_io_overview_solution1.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 52%] Building CXX object demos/CMakeFiles/demo_tutorial_file_io_overview_solution1.dir/tutorial/file_io_overview/solution1.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_file_io_overview_solution1.dir/tutorial/file_io_overview/solution1.cpp.o -MF CMakeFiles/demo_tutorial_file_io_overview_solution1.dir/tutorial/file_io_overview/solution1.cpp.o.d -o CMakeFiles/demo_tutorial_file_io_overview_solution1.dir/tutorial/file_io_overview/solution1.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/file_io_overview/solution1.cpp [ 52%] Linking CXX executable ../bin/demo_tutorial_bed_io_solution2 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_bed_io_solution2.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_bed_io_solution2.dir/link.d CMakeFiles/demo_tutorial_bed_io_solution2.dir/tutorial/bed_io/solution2.cpp.o -o ../bin/demo_tutorial_bed_io_solution2 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 52%] Built target demo_tutorial_bed_io_solution2 make -f demos/CMakeFiles/demo_tutorial_file_io_overview_solution2.dir/build.make demos/CMakeFiles/demo_tutorial_file_io_overview_solution2.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_file_io_overview_solution2.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_file_io_overview_solution2.dir/build.make demos/CMakeFiles/demo_tutorial_file_io_overview_solution2.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 52%] Building CXX object demos/CMakeFiles/demo_tutorial_file_io_overview_solution2.dir/tutorial/file_io_overview/solution2.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_file_io_overview_solution2.dir/tutorial/file_io_overview/solution2.cpp.o -MF CMakeFiles/demo_tutorial_file_io_overview_solution2.dir/tutorial/file_io_overview/solution2.cpp.o.d -o CMakeFiles/demo_tutorial_file_io_overview_solution2.dir/tutorial/file_io_overview/solution2.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/file_io_overview/solution2.cpp [ 52%] Linking CXX executable ../bin/demo_tutorial_blast_io_write_assignment cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_blast_io_write_assignment.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_blast_io_write_assignment.dir/link.d CMakeFiles/demo_tutorial_blast_io_write_assignment.dir/tutorial/blast_io/write_assignment.cpp.o -o ../bin/demo_tutorial_blast_io_write_assignment -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 52%] Built target demo_tutorial_blast_io_write_assignment make -f demos/CMakeFiles/demo_tutorial_file_io_overview_solution3.dir/build.make demos/CMakeFiles/demo_tutorial_file_io_overview_solution3.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_file_io_overview_solution3.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_file_io_overview_solution3.dir/build.make demos/CMakeFiles/demo_tutorial_file_io_overview_solution3.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 52%] Building CXX object demos/CMakeFiles/demo_tutorial_file_io_overview_solution3.dir/tutorial/file_io_overview/solution3.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_file_io_overview_solution3.dir/tutorial/file_io_overview/solution3.cpp.o -MF CMakeFiles/demo_tutorial_file_io_overview_solution3.dir/tutorial/file_io_overview/solution3.cpp.o.d -o CMakeFiles/demo_tutorial_file_io_overview_solution3.dir/tutorial/file_io_overview/solution3.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/file_io_overview/solution3.cpp [ 52%] Linking CXX executable ../bin/demo_tutorial_blast_io_read_assignment cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_blast_io_read_assignment.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_blast_io_read_assignment.dir/link.d CMakeFiles/demo_tutorial_blast_io_read_assignment.dir/tutorial/blast_io/read_assignment.cpp.o -o ../bin/demo_tutorial_blast_io_read_assignment -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 52%] Built target demo_tutorial_blast_io_read_assignment make -f demos/CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads.dir/build.make demos/CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads.dir/build.make demos/CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 52%] Building CXX object demos/CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads.dir/tutorial/fragment_store/access_aligned_reads.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads.dir/tutorial/fragment_store/access_aligned_reads.cpp.o -MF CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads.dir/tutorial/fragment_store/access_aligned_reads.cpp.o.d -o CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads.dir/tutorial/fragment_store/access_aligned_reads.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/fragment_store/access_aligned_reads.cpp [ 52%] Linking CXX executable ../bin/demo_tutorial_file_io_overview_example1 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_file_io_overview_example1.dir/link.txt --verbose=1 [ 53%] Linking CXX executable ../bin/demo_tutorial_file_io_overview_solution2 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_file_io_overview_solution2.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_file_io_overview_example1.dir/link.d CMakeFiles/demo_tutorial_file_io_overview_example1.dir/tutorial/file_io_overview/example1.cpp.o -o ../bin/demo_tutorial_file_io_overview_example1 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 53%] Built target demo_tutorial_file_io_overview_example1 make -f demos/CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads2.dir/build.make demos/CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads2.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads2.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads2.dir/build.make demos/CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads2.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_file_io_overview_solution2.dir/link.d CMakeFiles/demo_tutorial_file_io_overview_solution2.dir/tutorial/file_io_overview/solution2.cpp.o -o ../bin/demo_tutorial_file_io_overview_solution2 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 53%] Building CXX object demos/CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads2.dir/tutorial/fragment_store/access_aligned_reads2.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads2.dir/tutorial/fragment_store/access_aligned_reads2.cpp.o -MF CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads2.dir/tutorial/fragment_store/access_aligned_reads2.cpp.o.d -o CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads2.dir/tutorial/fragment_store/access_aligned_reads2.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/fragment_store/access_aligned_reads2.cpp [ 53%] Built target demo_tutorial_file_io_overview_solution2 make -f demos/CMakeFiles/demo_tutorial_fragment_store_base.dir/build.make demos/CMakeFiles/demo_tutorial_fragment_store_base.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_fragment_store_base.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_fragment_store_base.dir/build.make demos/CMakeFiles/demo_tutorial_fragment_store_base.dir/build [ 53%] Linking CXX executable ../bin/demo_tutorial_file_io_overview_solution1 make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_file_io_overview_solution1.dir/link.txt --verbose=1 [ 53%] Building CXX object demos/CMakeFiles/demo_tutorial_fragment_store_base.dir/tutorial/fragment_store/base.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_fragment_store_base.dir/tutorial/fragment_store/base.cpp.o -MF CMakeFiles/demo_tutorial_fragment_store_base.dir/tutorial/fragment_store/base.cpp.o.d -o CMakeFiles/demo_tutorial_fragment_store_base.dir/tutorial/fragment_store/base.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/fragment_store/base.cpp /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_file_io_overview_solution1.dir/link.d CMakeFiles/demo_tutorial_file_io_overview_solution1.dir/tutorial/file_io_overview/solution1.cpp.o -o ../bin/demo_tutorial_file_io_overview_solution1 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 53%] Built target demo_tutorial_file_io_overview_solution1 make -f demos/CMakeFiles/demo_tutorial_fragment_store_display_aligned_reads.dir/build.make demos/CMakeFiles/demo_tutorial_fragment_store_display_aligned_reads.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_fragment_store_display_aligned_reads.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_fragment_store_display_aligned_reads.dir/build.make demos/CMakeFiles/demo_tutorial_fragment_store_display_aligned_reads.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 53%] Building CXX object demos/CMakeFiles/demo_tutorial_fragment_store_display_aligned_reads.dir/tutorial/fragment_store/display_aligned_reads.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_fragment_store_display_aligned_reads.dir/tutorial/fragment_store/display_aligned_reads.cpp.o -MF CMakeFiles/demo_tutorial_fragment_store_display_aligned_reads.dir/tutorial/fragment_store/display_aligned_reads.cpp.o.d -o CMakeFiles/demo_tutorial_fragment_store_display_aligned_reads.dir/tutorial/fragment_store/display_aligned_reads.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/fragment_store/display_aligned_reads.cpp [ 53%] Linking CXX executable ../bin/demo_tutorial_file_io_overview_solution3 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_file_io_overview_solution3.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_file_io_overview_solution3.dir/link.d CMakeFiles/demo_tutorial_file_io_overview_solution3.dir/tutorial/file_io_overview/solution3.cpp.o -o ../bin/demo_tutorial_file_io_overview_solution3 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 53%] Built target demo_tutorial_file_io_overview_solution3 make -f demos/CMakeFiles/demo_tutorial_generic_programming_example_hashing.dir/build.make demos/CMakeFiles/demo_tutorial_generic_programming_example_hashing.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_generic_programming_example_hashing.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_generic_programming_example_hashing.dir/build.make demos/CMakeFiles/demo_tutorial_generic_programming_example_hashing.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 53%] Building CXX object demos/CMakeFiles/demo_tutorial_generic_programming_example_hashing.dir/tutorial/generic_programming/example_hashing.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_generic_programming_example_hashing.dir/tutorial/generic_programming/example_hashing.cpp.o -MF CMakeFiles/demo_tutorial_generic_programming_example_hashing.dir/tutorial/generic_programming/example_hashing.cpp.o.d -o CMakeFiles/demo_tutorial_generic_programming_example_hashing.dir/tutorial/generic_programming/example_hashing.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/generic_programming/example_hashing.cpp [ 53%] Linking CXX executable ../bin/demo_tutorial_fragment_store_base cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_fragment_store_base.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_fragment_store_base.dir/link.d CMakeFiles/demo_tutorial_fragment_store_base.dir/tutorial/fragment_store/base.cpp.o -o ../bin/demo_tutorial_fragment_store_base -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 53%] Built target demo_tutorial_fragment_store_base make -f demos/CMakeFiles/demo_tutorial_generic_programming_template_subclassing.dir/build.make demos/CMakeFiles/demo_tutorial_generic_programming_template_subclassing.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_generic_programming_template_subclassing.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_generic_programming_template_subclassing.dir/build.make demos/CMakeFiles/demo_tutorial_generic_programming_template_subclassing.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 53%] Building CXX object demos/CMakeFiles/demo_tutorial_generic_programming_template_subclassing.dir/tutorial/generic_programming/template_subclassing.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_generic_programming_template_subclassing.dir/tutorial/generic_programming/template_subclassing.cpp.o -MF CMakeFiles/demo_tutorial_generic_programming_template_subclassing.dir/tutorial/generic_programming/template_subclassing.cpp.o.d -o CMakeFiles/demo_tutorial_generic_programming_template_subclassing.dir/tutorial/generic_programming/template_subclassing.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/generic_programming/template_subclassing.cpp [ 54%] Linking CXX executable ../bin/demo_tutorial_generic_programming_example_hashing cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_generic_programming_example_hashing.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_generic_programming_example_hashing.dir/link.d CMakeFiles/demo_tutorial_generic_programming_example_hashing.dir/tutorial/generic_programming/example_hashing.cpp.o -o ../bin/demo_tutorial_generic_programming_example_hashing -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 54%] Linking CXX executable ../bin/demo_tutorial_generic_programming_template_subclassing cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_generic_programming_template_subclassing.dir/link.txt --verbose=1 [ 54%] Built target demo_tutorial_generic_programming_example_hashing make -f demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_1_hint.dir/build.make demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_1_hint.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_1_hint.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_1_hint.dir/build.make demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_1_hint.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 54%] Building CXX object demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_1_hint.dir/tutorial/genome_annotations/assignment_1_hint.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_1_hint.dir/tutorial/genome_annotations/assignment_1_hint.cpp.o -MF CMakeFiles/demo_tutorial_genome_annotations_assignment_1_hint.dir/tutorial/genome_annotations/assignment_1_hint.cpp.o.d -o CMakeFiles/demo_tutorial_genome_annotations_assignment_1_hint.dir/tutorial/genome_annotations/assignment_1_hint.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/genome_annotations/assignment_1_hint.cpp /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_generic_programming_template_subclassing.dir/link.d CMakeFiles/demo_tutorial_generic_programming_template_subclassing.dir/tutorial/generic_programming/template_subclassing.cpp.o -o ../bin/demo_tutorial_generic_programming_template_subclassing -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 54%] Built target demo_tutorial_generic_programming_template_subclassing make -f demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_1_solution.dir/build.make demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_1_solution.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_1_solution.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_1_solution.dir/build.make demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_1_solution.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 54%] Building CXX object demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_1_solution.dir/tutorial/genome_annotations/assignment_1_solution.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_1_solution.dir/tutorial/genome_annotations/assignment_1_solution.cpp.o -MF CMakeFiles/demo_tutorial_genome_annotations_assignment_1_solution.dir/tutorial/genome_annotations/assignment_1_solution.cpp.o.d -o CMakeFiles/demo_tutorial_genome_annotations_assignment_1_solution.dir/tutorial/genome_annotations/assignment_1_solution.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/genome_annotations/assignment_1_solution.cpp [ 54%] Linking CXX executable ../bin/demo_tutorial_genome_annotations_assignment_1_solution cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_genome_annotations_assignment_1_solution.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_genome_annotations_assignment_1_solution.dir/link.d CMakeFiles/demo_tutorial_genome_annotations_assignment_1_solution.dir/tutorial/genome_annotations/assignment_1_solution.cpp.o -o ../bin/demo_tutorial_genome_annotations_assignment_1_solution -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 54%] Built target demo_tutorial_genome_annotations_assignment_1_solution make -f demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_2_solution.dir/build.make demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_2_solution.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_2_solution.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_2_solution.dir/build.make demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_2_solution.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 54%] Building CXX object demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_2_solution.dir/tutorial/genome_annotations/assignment_2_solution.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_2_solution.dir/tutorial/genome_annotations/assignment_2_solution.cpp.o -MF CMakeFiles/demo_tutorial_genome_annotations_assignment_2_solution.dir/tutorial/genome_annotations/assignment_2_solution.cpp.o.d -o CMakeFiles/demo_tutorial_genome_annotations_assignment_2_solution.dir/tutorial/genome_annotations/assignment_2_solution.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/genome_annotations/assignment_2_solution.cpp [ 54%] Linking CXX executable ../bin/demo_tutorial_genome_annotations_assignment_1_hint cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_genome_annotations_assignment_1_hint.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_genome_annotations_assignment_1_hint.dir/link.d CMakeFiles/demo_tutorial_genome_annotations_assignment_1_hint.dir/tutorial/genome_annotations/assignment_1_hint.cpp.o -o ../bin/demo_tutorial_genome_annotations_assignment_1_hint -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 54%] Built target demo_tutorial_genome_annotations_assignment_1_hint make -f demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_3_solution.dir/build.make demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_3_solution.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_3_solution.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_3_solution.dir/build.make demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_3_solution.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 54%] Building CXX object demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_3_solution.dir/tutorial/genome_annotations/assignment_3_solution.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_3_solution.dir/tutorial/genome_annotations/assignment_3_solution.cpp.o -MF CMakeFiles/demo_tutorial_genome_annotations_assignment_3_solution.dir/tutorial/genome_annotations/assignment_3_solution.cpp.o.d -o CMakeFiles/demo_tutorial_genome_annotations_assignment_3_solution.dir/tutorial/genome_annotations/assignment_3_solution.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/genome_annotations/assignment_3_solution.cpp [ 54%] Linking CXX executable ../bin/demo_tutorial_fragment_store_access_aligned_reads cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads.dir/link.d CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads.dir/tutorial/fragment_store/access_aligned_reads.cpp.o -o ../bin/demo_tutorial_fragment_store_access_aligned_reads -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 54%] Built target demo_tutorial_fragment_store_access_aligned_reads make -f demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_4_solution.dir/build.make demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_4_solution.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_4_solution.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_4_solution.dir/build.make demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_4_solution.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 54%] Building CXX object demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_4_solution.dir/tutorial/genome_annotations/assignment_4_solution.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_genome_annotations_assignment_4_solution.dir/tutorial/genome_annotations/assignment_4_solution.cpp.o -MF CMakeFiles/demo_tutorial_genome_annotations_assignment_4_solution.dir/tutorial/genome_annotations/assignment_4_solution.cpp.o.d -o CMakeFiles/demo_tutorial_genome_annotations_assignment_4_solution.dir/tutorial/genome_annotations/assignment_4_solution.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/genome_annotations/assignment_4_solution.cpp [ 54%] Linking CXX executable ../bin/demo_tutorial_fragment_store_access_aligned_reads2 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads2.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads2.dir/link.d CMakeFiles/demo_tutorial_fragment_store_access_aligned_reads2.dir/tutorial/fragment_store/access_aligned_reads2.cpp.o -o ../bin/demo_tutorial_fragment_store_access_aligned_reads2 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 54%] Built target demo_tutorial_fragment_store_access_aligned_reads2 make -f demos/CMakeFiles/demo_tutorial_genome_annotations_base.dir/build.make demos/CMakeFiles/demo_tutorial_genome_annotations_base.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_genome_annotations_base.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_genome_annotations_base.dir/build.make demos/CMakeFiles/demo_tutorial_genome_annotations_base.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 54%] Building CXX object demos/CMakeFiles/demo_tutorial_genome_annotations_base.dir/tutorial/genome_annotations/base.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_genome_annotations_base.dir/tutorial/genome_annotations/base.cpp.o -MF CMakeFiles/demo_tutorial_genome_annotations_base.dir/tutorial/genome_annotations/base.cpp.o.d -o CMakeFiles/demo_tutorial_genome_annotations_base.dir/tutorial/genome_annotations/base.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/genome_annotations/base.cpp [ 54%] Linking CXX executable ../bin/demo_tutorial_fragment_store_display_aligned_reads cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_fragment_store_display_aligned_reads.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_fragment_store_display_aligned_reads.dir/link.d CMakeFiles/demo_tutorial_fragment_store_display_aligned_reads.dir/tutorial/fragment_store/display_aligned_reads.cpp.o -o ../bin/demo_tutorial_fragment_store_display_aligned_reads -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 54%] Built target demo_tutorial_fragment_store_display_aligned_reads make -f demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_base.dir/build.make demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_base.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_base.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_base.dir/build.make demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_base.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 54%] Building CXX object demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_base.dir/tutorial/gff_and_gtf_io/base.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_base.dir/tutorial/gff_and_gtf_io/base.cpp.o -MF CMakeFiles/demo_tutorial_gff_and_gtf_io_base.dir/tutorial/gff_and_gtf_io/base.cpp.o.d -o CMakeFiles/demo_tutorial_gff_and_gtf_io_base.dir/tutorial/gff_and_gtf_io/base.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/gff_and_gtf_io/base.cpp [ 54%] Linking CXX executable ../bin/demo_tutorial_consensus_alignment_with_positions cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_consensus_alignment_with_positions.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_consensus_alignment_with_positions.dir/link.d CMakeFiles/demo_tutorial_consensus_alignment_with_positions.dir/tutorial/consensus_alignment/with_positions.cpp.o -o ../bin/demo_tutorial_consensus_alignment_with_positions -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 54%] Built target demo_tutorial_consensus_alignment_with_positions make -f demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_example1.dir/build.make demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_example1.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_example1.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_example1.dir/build.make demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_example1.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 54%] Building CXX object demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_example1.dir/tutorial/gff_and_gtf_io/example1.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_example1.dir/tutorial/gff_and_gtf_io/example1.cpp.o -MF CMakeFiles/demo_tutorial_gff_and_gtf_io_example1.dir/tutorial/gff_and_gtf_io/example1.cpp.o.d -o CMakeFiles/demo_tutorial_gff_and_gtf_io_example1.dir/tutorial/gff_and_gtf_io/example1.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/gff_and_gtf_io/example1.cpp [ 54%] Linking CXX executable ../bin/demo_tutorial_genome_annotations_assignment_2_solution cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_genome_annotations_assignment_2_solution.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_genome_annotations_assignment_2_solution.dir/link.d CMakeFiles/demo_tutorial_genome_annotations_assignment_2_solution.dir/tutorial/genome_annotations/assignment_2_solution.cpp.o -o ../bin/demo_tutorial_genome_annotations_assignment_2_solution -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 54%] Linking CXX executable ../bin/demo_tutorial_gff_and_gtf_io_base cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_gff_and_gtf_io_base.dir/link.txt --verbose=1 [ 54%] Built target demo_tutorial_genome_annotations_assignment_2_solution make -f demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_example2.dir/build.make demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_example2.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_example2.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_example2.dir/build.make demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_example2.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 54%] Building CXX object demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_example2.dir/tutorial/gff_and_gtf_io/example2.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_example2.dir/tutorial/gff_and_gtf_io/example2.cpp.o -MF CMakeFiles/demo_tutorial_gff_and_gtf_io_example2.dir/tutorial/gff_and_gtf_io/example2.cpp.o.d -o CMakeFiles/demo_tutorial_gff_and_gtf_io_example2.dir/tutorial/gff_and_gtf_io/example2.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/gff_and_gtf_io/example2.cpp /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_gff_and_gtf_io_base.dir/link.d CMakeFiles/demo_tutorial_gff_and_gtf_io_base.dir/tutorial/gff_and_gtf_io/base.cpp.o -o ../bin/demo_tutorial_gff_and_gtf_io_base -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 54%] Built target demo_tutorial_gff_and_gtf_io_base make -f demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution1.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution1.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution1.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 54%] Building CXX object demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution1.dir/tutorial/gff_and_gtf_io/solution1.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution1.dir/tutorial/gff_and_gtf_io/solution1.cpp.o -MF CMakeFiles/demo_tutorial_gff_and_gtf_io_solution1.dir/tutorial/gff_and_gtf_io/solution1.cpp.o.d -o CMakeFiles/demo_tutorial_gff_and_gtf_io_solution1.dir/tutorial/gff_and_gtf_io/solution1.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/gff_and_gtf_io/solution1.cpp [ 54%] Linking CXX executable ../bin/demo_tutorial_consensus_alignment_without_positions cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_consensus_alignment_without_positions.dir/link.txt --verbose=1 [ 54%] Linking CXX executable ../bin/demo_tutorial_genome_annotations_assignment_3_solution cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_genome_annotations_assignment_3_solution.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_consensus_alignment_without_positions.dir/link.d CMakeFiles/demo_tutorial_consensus_alignment_without_positions.dir/tutorial/consensus_alignment/without_positions.cpp.o -o ../bin/demo_tutorial_consensus_alignment_without_positions -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_genome_annotations_assignment_3_solution.dir/link.d CMakeFiles/demo_tutorial_genome_annotations_assignment_3_solution.dir/tutorial/genome_annotations/assignment_3_solution.cpp.o -o ../bin/demo_tutorial_genome_annotations_assignment_3_solution -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 54%] Built target demo_tutorial_consensus_alignment_without_positions make -f demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution2.dir/build.make demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution2.dir/depend [ 54%] Built target demo_tutorial_genome_annotations_assignment_3_solution make -f demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution3.dir/build.make demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution3.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution2.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution3.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution2.dir/build.make demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution2.dir/build make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution3.dir/build.make demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution3.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 54%] Building CXX object demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution2.dir/tutorial/gff_and_gtf_io/solution2.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution2.dir/tutorial/gff_and_gtf_io/solution2.cpp.o -MF CMakeFiles/demo_tutorial_gff_and_gtf_io_solution2.dir/tutorial/gff_and_gtf_io/solution2.cpp.o.d -o CMakeFiles/demo_tutorial_gff_and_gtf_io_solution2.dir/tutorial/gff_and_gtf_io/solution2.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/gff_and_gtf_io/solution2.cpp [ 55%] Building CXX object demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution3.dir/tutorial/gff_and_gtf_io/solution3.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_gff_and_gtf_io_solution3.dir/tutorial/gff_and_gtf_io/solution3.cpp.o -MF CMakeFiles/demo_tutorial_gff_and_gtf_io_solution3.dir/tutorial/gff_and_gtf_io/solution3.cpp.o.d -o CMakeFiles/demo_tutorial_gff_and_gtf_io_solution3.dir/tutorial/gff_and_gtf_io/solution3.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/gff_and_gtf_io/solution3.cpp [ 56%] Linking CXX executable ../bin/demo_tutorial_genome_annotations_assignment_4_solution cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_genome_annotations_assignment_4_solution.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_genome_annotations_assignment_4_solution.dir/link.d CMakeFiles/demo_tutorial_genome_annotations_assignment_4_solution.dir/tutorial/genome_annotations/assignment_4_solution.cpp.o -o ../bin/demo_tutorial_genome_annotations_assignment_4_solution -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 56%] Built target demo_tutorial_genome_annotations_assignment_4_solution make -f demos/CMakeFiles/demo_tutorial_graph_graph_algo_scc.dir/build.make demos/CMakeFiles/demo_tutorial_graph_graph_algo_scc.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_graph_graph_algo_scc.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_graph_graph_algo_scc.dir/build.make demos/CMakeFiles/demo_tutorial_graph_graph_algo_scc.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 56%] Building CXX object demos/CMakeFiles/demo_tutorial_graph_graph_algo_scc.dir/tutorial/graph/graph_algo_scc.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_graph_graph_algo_scc.dir/tutorial/graph/graph_algo_scc.cpp.o -MF CMakeFiles/demo_tutorial_graph_graph_algo_scc.dir/tutorial/graph/graph_algo_scc.cpp.o.d -o CMakeFiles/demo_tutorial_graph_graph_algo_scc.dir/tutorial/graph/graph_algo_scc.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/graph/graph_algo_scc.cpp [ 56%] Linking CXX executable ../bin/demo_tutorial_genome_annotations_base cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_genome_annotations_base.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_genome_annotations_base.dir/link.d CMakeFiles/demo_tutorial_genome_annotations_base.dir/tutorial/genome_annotations/base.cpp.o -o ../bin/demo_tutorial_genome_annotations_base -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 56%] Built target demo_tutorial_genome_annotations_base make -f demos/CMakeFiles/demo_tutorial_graph_graph_dijkstra.dir/build.make demos/CMakeFiles/demo_tutorial_graph_graph_dijkstra.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_graph_graph_dijkstra.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_graph_graph_dijkstra.dir/build.make demos/CMakeFiles/demo_tutorial_graph_graph_dijkstra.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 56%] Building CXX object demos/CMakeFiles/demo_tutorial_graph_graph_dijkstra.dir/tutorial/graph/graph_dijkstra.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_graph_graph_dijkstra.dir/tutorial/graph/graph_dijkstra.cpp.o -MF CMakeFiles/demo_tutorial_graph_graph_dijkstra.dir/tutorial/graph/graph_dijkstra.cpp.o.d -o CMakeFiles/demo_tutorial_graph_graph_dijkstra.dir/tutorial/graph/graph_dijkstra.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/graph/graph_dijkstra.cpp [ 56%] Linking CXX executable ../bin/demo_tutorial_gff_and_gtf_io_solution3 [ 56%] Linking CXX executable ../bin/demo_tutorial_graph_graph_algo_scc cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_gff_and_gtf_io_solution3.dir/link.txt --verbose=1 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_graph_graph_algo_scc.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libbz2.so/usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_graph_graph_algo_scc.dir/link.d CMakeFiles/demo_tutorial_graph_graph_algo_scc.dir/tutorial/graph/graph_algo_scc.cpp.o -o ../bin/demo_tutorial_graph_graph_algo_scc -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' : warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. [ 56%] Built target demo_tutorial_graph_graph_algo_scc make -f demos/CMakeFiles/demo_tutorial_graph_graph_hmm.dir/build.make demos/CMakeFiles/demo_tutorial_graph_graph_hmm.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_graph_graph_hmm.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_graph_graph_hmm.dir/build.make demos/CMakeFiles/demo_tutorial_graph_graph_hmm.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 56%] Building CXX object demos/CMakeFiles/demo_tutorial_graph_graph_hmm.dir/tutorial/graph/graph_hmm.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_graph_graph_hmm.dir/tutorial/graph/graph_hmm.cpp.o -MF CMakeFiles/demo_tutorial_graph_graph_hmm.dir/tutorial/graph/graph_hmm.cpp.o.d -o CMakeFiles/demo_tutorial_graph_graph_hmm.dir/tutorial/graph/graph_hmm.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/graph/graph_hmm.cpp /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_gff_and_gtf_io_solution3.dir/link.d CMakeFiles/demo_tutorial_gff_and_gtf_io_solution3.dir/tutorial/gff_and_gtf_io/solution3.cpp.o -o ../bin/demo_tutorial_gff_and_gtf_io_solution3 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 56%] Built target demo_tutorial_gff_and_gtf_io_solution3 make -f demos/CMakeFiles/demo_tutorial_graph_solution_1.dir/build.make demos/CMakeFiles/demo_tutorial_graph_solution_1.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_graph_solution_1.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_graph_solution_1.dir/build.make demos/CMakeFiles/demo_tutorial_graph_solution_1.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 56%] Building CXX object demos/CMakeFiles/demo_tutorial_graph_solution_1.dir/tutorial/graph/solution_1.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_graph_solution_1.dir/tutorial/graph/solution_1.cpp.o -MF CMakeFiles/demo_tutorial_graph_solution_1.dir/tutorial/graph/solution_1.cpp.o.d -o CMakeFiles/demo_tutorial_graph_solution_1.dir/tutorial/graph/solution_1.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/graph/solution_1.cpp [ 56%] Linking CXX executable ../bin/demo_tutorial_gff_and_gtf_io_example1 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_gff_and_gtf_io_example1.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_gff_and_gtf_io_example1.dir/link.d CMakeFiles/demo_tutorial_gff_and_gtf_io_example1.dir/tutorial/gff_and_gtf_io/example1.cpp.o -o ../bin/demo_tutorial_gff_and_gtf_io_example1 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 56%] Built target demo_tutorial_gff_and_gtf_io_example1 make -f demos/CMakeFiles/demo_tutorial_index_iterators_index_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_index_iterators_index_assignment1.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_index_iterators_index_assignment1.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_index_iterators_index_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_index_iterators_index_assignment1.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 56%] Building CXX object demos/CMakeFiles/demo_tutorial_index_iterators_index_assignment1.dir/tutorial/index_iterators/index_assignment1.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_index_iterators_index_assignment1.dir/tutorial/index_iterators/index_assignment1.cpp.o -MF CMakeFiles/demo_tutorial_index_iterators_index_assignment1.dir/tutorial/index_iterators/index_assignment1.cpp.o.d -o CMakeFiles/demo_tutorial_index_iterators_index_assignment1.dir/tutorial/index_iterators/index_assignment1.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/index_iterators/index_assignment1.cpp [ 56%] Linking CXX executable ../bin/demo_tutorial_gff_and_gtf_io_solution1 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_gff_and_gtf_io_solution1.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_gff_and_gtf_io_solution1.dir/link.d CMakeFiles/demo_tutorial_gff_and_gtf_io_solution1.dir/tutorial/gff_and_gtf_io/solution1.cpp.o -o ../bin/demo_tutorial_gff_and_gtf_io_solution1 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 56%] Linking CXX executable ../bin/demo_tutorial_gff_and_gtf_io_solution2 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_gff_and_gtf_io_solution2.dir/link.txt --verbose=1 [ 56%] Built target demo_tutorial_gff_and_gtf_io_solution1 make -f demos/CMakeFiles/demo_tutorial_index_iterators_index_assignment2.dir/build.make demos/CMakeFiles/demo_tutorial_index_iterators_index_assignment2.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_index_iterators_index_assignment2.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_index_iterators_index_assignment2.dir/build.make demos/CMakeFiles/demo_tutorial_index_iterators_index_assignment2.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 57%] Building CXX object demos/CMakeFiles/demo_tutorial_index_iterators_index_assignment2.dir/tutorial/index_iterators/index_assignment2.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_index_iterators_index_assignment2.dir/tutorial/index_iterators/index_assignment2.cpp.o -MF CMakeFiles/demo_tutorial_index_iterators_index_assignment2.dir/tutorial/index_iterators/index_assignment2.cpp.o.d -o CMakeFiles/demo_tutorial_index_iterators_index_assignment2.dir/tutorial/index_iterators/index_assignment2.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/index_iterators/index_assignment2.cpp /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_gff_and_gtf_io_solution2.dir/link.d CMakeFiles/demo_tutorial_gff_and_gtf_io_solution2.dir/tutorial/gff_and_gtf_io/solution2.cpp.o -o ../bin/demo_tutorial_gff_and_gtf_io_solution2 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 57%] Built target demo_tutorial_gff_and_gtf_io_solution2 make -f demos/CMakeFiles/demo_tutorial_index_iterators_index_bidirectional_search.dir/build.make demos/CMakeFiles/demo_tutorial_index_iterators_index_bidirectional_search.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_index_iterators_index_bidirectional_search.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_index_iterators_index_bidirectional_search.dir/build.make demos/CMakeFiles/demo_tutorial_index_iterators_index_bidirectional_search.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 57%] Building CXX object demos/CMakeFiles/demo_tutorial_index_iterators_index_bidirectional_search.dir/tutorial/index_iterators/index_bidirectional_search.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_index_iterators_index_bidirectional_search.dir/tutorial/index_iterators/index_bidirectional_search.cpp.o -MF CMakeFiles/demo_tutorial_index_iterators_index_bidirectional_search.dir/tutorial/index_iterators/index_bidirectional_search.cpp.o.d -o CMakeFiles/demo_tutorial_index_iterators_index_bidirectional_search.dir/tutorial/index_iterators/index_bidirectional_search.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/index_iterators/index_bidirectional_search.cpp [ 57%] Linking CXX executable ../bin/demo_tutorial_gff_and_gtf_io_example2 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_gff_and_gtf_io_example2.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_gff_and_gtf_io_example2.dir/link.d CMakeFiles/demo_tutorial_gff_and_gtf_io_example2.dir/tutorial/gff_and_gtf_io/example2.cpp.o -o ../bin/demo_tutorial_gff_and_gtf_io_example2 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 57%] Built target demo_tutorial_gff_and_gtf_io_example2 make -f demos/CMakeFiles/demo_tutorial_index_iterators_index_preorder.dir/build.make demos/CMakeFiles/demo_tutorial_index_iterators_index_preorder.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_index_iterators_index_preorder.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_index_iterators_index_preorder.dir/build.make demos/CMakeFiles/demo_tutorial_index_iterators_index_preorder.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 57%] Building CXX object demos/CMakeFiles/demo_tutorial_index_iterators_index_preorder.dir/tutorial/index_iterators/index_preorder.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_index_iterators_index_preorder.dir/tutorial/index_iterators/index_preorder.cpp.o -MF CMakeFiles/demo_tutorial_index_iterators_index_preorder.dir/tutorial/index_iterators/index_preorder.cpp.o.d -o CMakeFiles/demo_tutorial_index_iterators_index_preorder.dir/tutorial/index_iterators/index_preorder.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/index_iterators/index_preorder.cpp [ 57%] Linking CXX executable ../bin/demo_tutorial_graph_solution_1 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_graph_solution_1.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_graph_solution_1.dir/link.d CMakeFiles/demo_tutorial_graph_solution_1.dir/tutorial/graph/solution_1.cpp.o -o ../bin/demo_tutorial_graph_solution_1 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 57%] Built target demo_tutorial_graph_solution_1 make -f demos/CMakeFiles/demo_tutorial_index_iterators_index_property_maps.dir/build.make demos/CMakeFiles/demo_tutorial_index_iterators_index_property_maps.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_index_iterators_index_property_maps.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_index_iterators_index_property_maps.dir/build.make demos/CMakeFiles/demo_tutorial_index_iterators_index_property_maps.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 57%] Linking CXX executable ../bin/demo_tutorial_graph_graph_hmm cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_graph_graph_hmm.dir/link.txt --verbose=1 [ 57%] Building CXX object demos/CMakeFiles/demo_tutorial_index_iterators_index_property_maps.dir/tutorial/index_iterators/index_property_maps.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_index_iterators_index_property_maps.dir/tutorial/index_iterators/index_property_maps.cpp.o -MF CMakeFiles/demo_tutorial_index_iterators_index_property_maps.dir/tutorial/index_iterators/index_property_maps.cpp.o.d -o CMakeFiles/demo_tutorial_index_iterators_index_property_maps.dir/tutorial/index_iterators/index_property_maps.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/index_iterators/index_property_maps.cpp /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_graph_graph_hmm.dir/link.d CMakeFiles/demo_tutorial_graph_graph_hmm.dir/tutorial/graph/graph_hmm.cpp.o -o ../bin/demo_tutorial_graph_graph_hmm -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 57%] Built target demo_tutorial_graph_graph_hmm make -f demos/CMakeFiles/demo_tutorial_index_iterators_index_search.dir/build.make demos/CMakeFiles/demo_tutorial_index_iterators_index_search.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_index_iterators_index_search.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_index_iterators_index_search.dir/build.make demos/CMakeFiles/demo_tutorial_index_iterators_index_search.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 57%] Building CXX object demos/CMakeFiles/demo_tutorial_index_iterators_index_search.dir/tutorial/index_iterators/index_search.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_index_iterators_index_search.dir/tutorial/index_iterators/index_search.cpp.o -MF CMakeFiles/demo_tutorial_index_iterators_index_search.dir/tutorial/index_iterators/index_search.cpp.o.d -o CMakeFiles/demo_tutorial_index_iterators_index_search.dir/tutorial/index_iterators/index_search.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/index_iterators/index_search.cpp [ 57%] Linking CXX executable ../bin/demo_tutorial_graph_graph_dijkstra cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_graph_graph_dijkstra.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_graph_graph_dijkstra.dir/link.d CMakeFiles/demo_tutorial_graph_graph_dijkstra.dir/tutorial/graph/graph_dijkstra.cpp.o -o ../bin/demo_tutorial_graph_graph_dijkstra -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 57%] Built target demo_tutorial_graph_graph_dijkstra make -f demos/CMakeFiles/demo_tutorial_index_iterators_index_search2.dir/build.make demos/CMakeFiles/demo_tutorial_index_iterators_index_search2.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_index_iterators_index_search2.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_index_iterators_index_search2.dir/build.make demos/CMakeFiles/demo_tutorial_index_iterators_index_search2.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 57%] Building CXX object demos/CMakeFiles/demo_tutorial_index_iterators_index_search2.dir/tutorial/index_iterators/index_search2.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_index_iterators_index_search2.dir/tutorial/index_iterators/index_search2.cpp.o -MF CMakeFiles/demo_tutorial_index_iterators_index_search2.dir/tutorial/index_iterators/index_search2.cpp.o.d -o CMakeFiles/demo_tutorial_index_iterators_index_search2.dir/tutorial/index_iterators/index_search2.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/index_iterators/index_search2.cpp [ 57%] Linking CXX executable ../bin/demo_tutorial_index_iterators_index_preorder cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_index_iterators_index_preorder.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_index_iterators_index_preorder.dir/link.d CMakeFiles/demo_tutorial_index_iterators_index_preorder.dir/tutorial/index_iterators/index_preorder.cpp.o -o ../bin/demo_tutorial_index_iterators_index_preorder -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 57%] Built target demo_tutorial_index_iterators_index_preorder make -f demos/CMakeFiles/demo_tutorial_index_iterators_iterator_assignment2.dir/build.make demos/CMakeFiles/demo_tutorial_index_iterators_iterator_assignment2.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_index_iterators_iterator_assignment2.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_index_iterators_iterator_assignment2.dir/build.make demos/CMakeFiles/demo_tutorial_index_iterators_iterator_assignment2.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 58%] Building CXX object demos/CMakeFiles/demo_tutorial_index_iterators_iterator_assignment2.dir/tutorial/index_iterators/iterator_assignment2.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_index_iterators_iterator_assignment2.dir/tutorial/index_iterators/iterator_assignment2.cpp.o -MF CMakeFiles/demo_tutorial_index_iterators_iterator_assignment2.dir/tutorial/index_iterators/iterator_assignment2.cpp.o.d -o CMakeFiles/demo_tutorial_index_iterators_iterator_assignment2.dir/tutorial/index_iterators/iterator_assignment2.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/index_iterators/iterator_assignment2.cpp [ 58%] Linking CXX executable ../bin/demo_tutorial_index_iterators_index_property_maps cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_index_iterators_index_property_maps.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_index_iterators_index_property_maps.dir/link.d CMakeFiles/demo_tutorial_index_iterators_index_property_maps.dir/tutorial/index_iterators/index_property_maps.cpp.o -o ../bin/demo_tutorial_index_iterators_index_property_maps -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 58%] Built target demo_tutorial_index_iterators_index_property_maps make -f demos/CMakeFiles/demo_tutorial_index_iterators_iterator_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_index_iterators_iterator_solution1.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_index_iterators_iterator_solution1.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_index_iterators_iterator_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_index_iterators_iterator_solution1.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 58%] Building CXX object demos/CMakeFiles/demo_tutorial_index_iterators_iterator_solution1.dir/tutorial/index_iterators/iterator_solution1.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_index_iterators_iterator_solution1.dir/tutorial/index_iterators/iterator_solution1.cpp.o -MF CMakeFiles/demo_tutorial_index_iterators_iterator_solution1.dir/tutorial/index_iterators/iterator_solution1.cpp.o.d -o CMakeFiles/demo_tutorial_index_iterators_iterator_solution1.dir/tutorial/index_iterators/iterator_solution1.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/index_iterators/iterator_solution1.cpp [ 58%] Linking CXX executable ../bin/demo_tutorial_index_iterators_index_search cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_index_iterators_index_search.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_index_iterators_index_search.dir/link.d CMakeFiles/demo_tutorial_index_iterators_index_search.dir/tutorial/index_iterators/index_search.cpp.o -o ../bin/demo_tutorial_index_iterators_index_search -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 58%] Built target demo_tutorial_index_iterators_index_search make -f demos/CMakeFiles/demo_tutorial_index_iterators_iterator_solution2.dir/build.make demos/CMakeFiles/demo_tutorial_index_iterators_iterator_solution2.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_index_iterators_iterator_solution2.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_index_iterators_iterator_solution2.dir/build.make demos/CMakeFiles/demo_tutorial_index_iterators_iterator_solution2.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 58%] Building CXX object demos/CMakeFiles/demo_tutorial_index_iterators_iterator_solution2.dir/tutorial/index_iterators/iterator_solution2.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_index_iterators_iterator_solution2.dir/tutorial/index_iterators/iterator_solution2.cpp.o -MF CMakeFiles/demo_tutorial_index_iterators_iterator_solution2.dir/tutorial/index_iterators/iterator_solution2.cpp.o.d -o CMakeFiles/demo_tutorial_index_iterators_iterator_solution2.dir/tutorial/index_iterators/iterator_solution2.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/index_iterators/iterator_solution2.cpp [ 58%] Linking CXX executable ../bin/demo_tutorial_index_iterators_index_search2 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_index_iterators_index_search2.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_index_iterators_index_search2.dir/link.d CMakeFiles/demo_tutorial_index_iterators_index_search2.dir/tutorial/index_iterators/index_search2.cpp.o -o ../bin/demo_tutorial_index_iterators_index_search2 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 58%] Built target demo_tutorial_index_iterators_index_search2 make -f demos/CMakeFiles/demo_tutorial_index_iterators_iterator_solution3.dir/build.make demos/CMakeFiles/demo_tutorial_index_iterators_iterator_solution3.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_index_iterators_iterator_solution3.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_index_iterators_iterator_solution3.dir/build.make demos/CMakeFiles/demo_tutorial_index_iterators_iterator_solution3.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 58%] Building CXX object demos/CMakeFiles/demo_tutorial_index_iterators_iterator_solution3.dir/tutorial/index_iterators/iterator_solution3.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_index_iterators_iterator_solution3.dir/tutorial/index_iterators/iterator_solution3.cpp.o -MF CMakeFiles/demo_tutorial_index_iterators_iterator_solution3.dir/tutorial/index_iterators/iterator_solution3.cpp.o.d -o CMakeFiles/demo_tutorial_index_iterators_iterator_solution3.dir/tutorial/index_iterators/iterator_solution3.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/index_iterators/iterator_solution3.cpp [ 58%] Linking CXX executable ../bin/demo_tutorial_index_iterators_iterator_assignment2 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_index_iterators_iterator_assignment2.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_index_iterators_iterator_assignment2.dir/link.d CMakeFiles/demo_tutorial_index_iterators_iterator_assignment2.dir/tutorial/index_iterators/iterator_assignment2.cpp.o -o ../bin/demo_tutorial_index_iterators_iterator_assignment2 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 58%] Built target demo_tutorial_index_iterators_iterator_assignment2 make -f demos/CMakeFiles/demo_tutorial_indexed_fasta_io_base.dir/build.make demos/CMakeFiles/demo_tutorial_indexed_fasta_io_base.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_indexed_fasta_io_base.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_indexed_fasta_io_base.dir/build.make demos/CMakeFiles/demo_tutorial_indexed_fasta_io_base.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 58%] Building CXX object demos/CMakeFiles/demo_tutorial_indexed_fasta_io_base.dir/tutorial/indexed_fasta_io/base.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_indexed_fasta_io_base.dir/tutorial/indexed_fasta_io/base.cpp.o -MF CMakeFiles/demo_tutorial_indexed_fasta_io_base.dir/tutorial/indexed_fasta_io/base.cpp.o.d -o CMakeFiles/demo_tutorial_indexed_fasta_io_base.dir/tutorial/indexed_fasta_io/base.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/indexed_fasta_io/base.cpp [ 58%] Linking CXX executable ../bin/demo_tutorial_index_iterators_iterator_solution2 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_index_iterators_iterator_solution2.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_index_iterators_iterator_solution2.dir/link.d CMakeFiles/demo_tutorial_index_iterators_iterator_solution2.dir/tutorial/index_iterators/iterator_solution2.cpp.o -o ../bin/demo_tutorial_index_iterators_iterator_solution2 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 58%] Built target demo_tutorial_index_iterators_iterator_solution2 make -f demos/CMakeFiles/demo_tutorial_indexed_fasta_io_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_indexed_fasta_io_solution1.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_indexed_fasta_io_solution1.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_indexed_fasta_io_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_indexed_fasta_io_solution1.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 58%] Building CXX object demos/CMakeFiles/demo_tutorial_indexed_fasta_io_solution1.dir/tutorial/indexed_fasta_io/solution1.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_indexed_fasta_io_solution1.dir/tutorial/indexed_fasta_io/solution1.cpp.o -MF CMakeFiles/demo_tutorial_indexed_fasta_io_solution1.dir/tutorial/indexed_fasta_io/solution1.cpp.o.d -o CMakeFiles/demo_tutorial_indexed_fasta_io_solution1.dir/tutorial/indexed_fasta_io/solution1.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/indexed_fasta_io/solution1.cpp [ 58%] Linking CXX executable ../bin/demo_tutorial_index_iterators_iterator_solution3 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_index_iterators_iterator_solution3.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_index_iterators_iterator_solution3.dir/link.d CMakeFiles/demo_tutorial_index_iterators_iterator_solution3.dir/tutorial/index_iterators/iterator_solution3.cpp.o -o ../bin/demo_tutorial_index_iterators_iterator_solution3 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 58%] Built target demo_tutorial_index_iterators_iterator_solution3 make -f demos/CMakeFiles/demo_tutorial_indexed_fasta_io_solution2.dir/build.make demos/CMakeFiles/demo_tutorial_indexed_fasta_io_solution2.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_indexed_fasta_io_solution2.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_indexed_fasta_io_solution2.dir/build.make demos/CMakeFiles/demo_tutorial_indexed_fasta_io_solution2.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 58%] Building CXX object demos/CMakeFiles/demo_tutorial_indexed_fasta_io_solution2.dir/tutorial/indexed_fasta_io/solution2.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_indexed_fasta_io_solution2.dir/tutorial/indexed_fasta_io/solution2.cpp.o -MF CMakeFiles/demo_tutorial_indexed_fasta_io_solution2.dir/tutorial/indexed_fasta_io/solution2.cpp.o.d -o CMakeFiles/demo_tutorial_indexed_fasta_io_solution2.dir/tutorial/indexed_fasta_io/solution2.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/indexed_fasta_io/solution2.cpp [ 58%] Linking CXX executable ../bin/demo_tutorial_index_iterators_index_bidirectional_search cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_index_iterators_index_bidirectional_search.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_index_iterators_index_bidirectional_search.dir/link.d CMakeFiles/demo_tutorial_index_iterators_index_bidirectional_search.dir/tutorial/index_iterators/index_bidirectional_search.cpp.o -o ../bin/demo_tutorial_index_iterators_index_bidirectional_search -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 58%] Built target demo_tutorial_index_iterators_index_bidirectional_search make -f demos/CMakeFiles/demo_tutorial_indices_assignment_1.dir/build.make demos/CMakeFiles/demo_tutorial_indices_assignment_1.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_indices_assignment_1.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_indices_assignment_1.dir/build.make demos/CMakeFiles/demo_tutorial_indices_assignment_1.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 58%] Building CXX object demos/CMakeFiles/demo_tutorial_indices_assignment_1.dir/tutorial/indices/assignment_1.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_indices_assignment_1.dir/tutorial/indices/assignment_1.cpp.o -MF CMakeFiles/demo_tutorial_indices_assignment_1.dir/tutorial/indices/assignment_1.cpp.o.d -o CMakeFiles/demo_tutorial_indices_assignment_1.dir/tutorial/indices/assignment_1.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/indices/assignment_1.cpp [ 58%] Linking CXX executable ../bin/demo_tutorial_indexed_fasta_io_base cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_indexed_fasta_io_base.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_indexed_fasta_io_base.dir/link.d CMakeFiles/demo_tutorial_indexed_fasta_io_base.dir/tutorial/indexed_fasta_io/base.cpp.o -o ../bin/demo_tutorial_indexed_fasta_io_base -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 58%] Built target demo_tutorial_indexed_fasta_io_base make -f demos/CMakeFiles/demo_tutorial_indices_assignment_2.dir/build.make demos/CMakeFiles/demo_tutorial_indices_assignment_2.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_indices_assignment_2.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_indices_assignment_2.dir/build.make demos/CMakeFiles/demo_tutorial_indices_assignment_2.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 58%] Building CXX object demos/CMakeFiles/demo_tutorial_indices_assignment_2.dir/tutorial/indices/assignment_2.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_indices_assignment_2.dir/tutorial/indices/assignment_2.cpp.o -MF CMakeFiles/demo_tutorial_indices_assignment_2.dir/tutorial/indices/assignment_2.cpp.o.d -o CMakeFiles/demo_tutorial_indices_assignment_2.dir/tutorial/indices/assignment_2.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/indices/assignment_2.cpp [ 58%] Linking CXX executable ../bin/demo_tutorial_indexed_fasta_io_solution1 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_indexed_fasta_io_solution1.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_indexed_fasta_io_solution1.dir/link.d CMakeFiles/demo_tutorial_indexed_fasta_io_solution1.dir/tutorial/indexed_fasta_io/solution1.cpp.o -o ../bin/demo_tutorial_indexed_fasta_io_solution1 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 58%] Built target demo_tutorial_indexed_fasta_io_solution1 make -f demos/CMakeFiles/demo_tutorial_indices_base.dir/build.make demos/CMakeFiles/demo_tutorial_indices_base.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_indices_base.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_indices_base.dir/build.make demos/CMakeFiles/demo_tutorial_indices_base.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 58%] Building CXX object demos/CMakeFiles/demo_tutorial_indices_base.dir/tutorial/indices/base.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_indices_base.dir/tutorial/indices/base.cpp.o -MF CMakeFiles/demo_tutorial_indices_base.dir/tutorial/indices/base.cpp.o.d -o CMakeFiles/demo_tutorial_indices_base.dir/tutorial/indices/base.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/indices/base.cpp [ 58%] Linking CXX executable ../bin/demo_tutorial_indices_assignment_1 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_indices_assignment_1.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_indices_assignment_1.dir/link.d CMakeFiles/demo_tutorial_indices_assignment_1.dir/tutorial/indices/assignment_1.cpp.o -o ../bin/demo_tutorial_indices_assignment_1 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 58%] Built target demo_tutorial_indices_assignment_1 make -f demos/CMakeFiles/demo_tutorial_indices_find2_index_approx.dir/build.make demos/CMakeFiles/demo_tutorial_indices_find2_index_approx.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_indices_find2_index_approx.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_indices_find2_index_approx.dir/build.make demos/CMakeFiles/demo_tutorial_indices_find2_index_approx.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 58%] Building CXX object demos/CMakeFiles/demo_tutorial_indices_find2_index_approx.dir/tutorial/indices/find2_index_approx.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_indices_find2_index_approx.dir/tutorial/indices/find2_index_approx.cpp.o -MF CMakeFiles/demo_tutorial_indices_find2_index_approx.dir/tutorial/indices/find2_index_approx.cpp.o.d -o CMakeFiles/demo_tutorial_indices_find2_index_approx.dir/tutorial/indices/find2_index_approx.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/indices/find2_index_approx.cpp [ 58%] Linking CXX executable ../bin/demo_tutorial_index_iterators_index_assignment1 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_index_iterators_index_assignment1.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. [ 58%] Linking CXX executable ../bin/demo_tutorial_indices_assignment_2 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_indices_assignment_2.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_index_iterators_index_assignment1.dir/link.d CMakeFiles/demo_tutorial_index_iterators_index_assignment1.dir/tutorial/index_iterators/index_assignment1.cpp.o -o ../bin/demo_tutorial_index_iterators_index_assignment1 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 58%] Built target demo_tutorial_index_iterators_index_assignment1 make -f demos/CMakeFiles/demo_tutorial_indices_fm_index.dir/build.make demos/CMakeFiles/demo_tutorial_indices_fm_index.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_indices_fm_index.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_indices_fm_index.dir/build.make demos/CMakeFiles/demo_tutorial_indices_fm_index.dir/build /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_indices_assignment_2.dir/link.d CMakeFiles/demo_tutorial_indices_assignment_2.dir/tutorial/indices/assignment_2.cpp.o -o ../bin/demo_tutorial_indices_assignment_2 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 58%] Built target demo_tutorial_indices_assignment_2 make -f demos/CMakeFiles/demo_tutorial_iterators_assignment_1.dir/build.make demos/CMakeFiles/demo_tutorial_iterators_assignment_1.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_iterators_assignment_1.dir/DependInfo.cmake "--color=" [ 58%] Building CXX object demos/CMakeFiles/demo_tutorial_indices_fm_index.dir/tutorial/indices/fm_index.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_indices_fm_index.dir/tutorial/indices/fm_index.cpp.o -MF CMakeFiles/demo_tutorial_indices_fm_index.dir/tutorial/indices/fm_index.cpp.o.d -o CMakeFiles/demo_tutorial_indices_fm_index.dir/tutorial/indices/fm_index.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/indices/fm_index.cpp make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_iterators_assignment_1.dir/build.make demos/CMakeFiles/demo_tutorial_iterators_assignment_1.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 58%] Building CXX object demos/CMakeFiles/demo_tutorial_iterators_assignment_1.dir/tutorial/iterators/assignment_1.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_iterators_assignment_1.dir/tutorial/iterators/assignment_1.cpp.o -MF CMakeFiles/demo_tutorial_iterators_assignment_1.dir/tutorial/iterators/assignment_1.cpp.o.d -o CMakeFiles/demo_tutorial_iterators_assignment_1.dir/tutorial/iterators/assignment_1.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/iterators/assignment_1.cpp [ 58%] Linking CXX executable ../bin/demo_tutorial_index_iterators_index_assignment2 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_index_iterators_index_assignment2.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_index_iterators_index_assignment2.dir/link.d CMakeFiles/demo_tutorial_index_iterators_index_assignment2.dir/tutorial/index_iterators/index_assignment2.cpp.o -o ../bin/demo_tutorial_index_iterators_index_assignment2 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 58%] Built target demo_tutorial_index_iterators_index_assignment2 make -f demos/CMakeFiles/demo_tutorial_iterators_assignment_1_solution.dir/build.make demos/CMakeFiles/demo_tutorial_iterators_assignment_1_solution.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_iterators_assignment_1_solution.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_iterators_assignment_1_solution.dir/build.make demos/CMakeFiles/demo_tutorial_iterators_assignment_1_solution.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 58%] Building CXX object demos/CMakeFiles/demo_tutorial_iterators_assignment_1_solution.dir/tutorial/iterators/assignment_1_solution.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_iterators_assignment_1_solution.dir/tutorial/iterators/assignment_1_solution.cpp.o -MF CMakeFiles/demo_tutorial_iterators_assignment_1_solution.dir/tutorial/iterators/assignment_1_solution.cpp.o.d -o CMakeFiles/demo_tutorial_iterators_assignment_1_solution.dir/tutorial/iterators/assignment_1_solution.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/iterators/assignment_1_solution.cpp [ 59%] Linking CXX executable ../bin/demo_tutorial_indexed_fasta_io_solution2 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_indexed_fasta_io_solution2.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_indexed_fasta_io_solution2.dir/link.d CMakeFiles/demo_tutorial_indexed_fasta_io_solution2.dir/tutorial/indexed_fasta_io/solution2.cpp.o -o ../bin/demo_tutorial_indexed_fasta_io_solution2 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 59%] Built target demo_tutorial_indexed_fasta_io_solution2 make -f demos/CMakeFiles/demo_tutorial_iterators_assignment_2_solution.dir/build.make demos/CMakeFiles/demo_tutorial_iterators_assignment_2_solution.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_iterators_assignment_2_solution.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_iterators_assignment_2_solution.dir/build.make demos/CMakeFiles/demo_tutorial_iterators_assignment_2_solution.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 59%] Building CXX object demos/CMakeFiles/demo_tutorial_iterators_assignment_2_solution.dir/tutorial/iterators/assignment_2_solution.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_iterators_assignment_2_solution.dir/tutorial/iterators/assignment_2_solution.cpp.o -MF CMakeFiles/demo_tutorial_iterators_assignment_2_solution.dir/tutorial/iterators/assignment_2_solution.cpp.o.d -o CMakeFiles/demo_tutorial_iterators_assignment_2_solution.dir/tutorial/iterators/assignment_2_solution.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/iterators/assignment_2_solution.cpp [ 60%] Linking CXX executable ../bin/demo_tutorial_iterators_assignment_1 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_iterators_assignment_1.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_iterators_assignment_1.dir/link.d CMakeFiles/demo_tutorial_iterators_assignment_1.dir/tutorial/iterators/assignment_1.cpp.o -o ../bin/demo_tutorial_iterators_assignment_1 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 60%] Built target demo_tutorial_iterators_assignment_1 make -f demos/CMakeFiles/demo_tutorial_iterators_assignment_3_workshop.dir/build.make demos/CMakeFiles/demo_tutorial_iterators_assignment_3_workshop.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_iterators_assignment_3_workshop.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_iterators_assignment_3_workshop.dir/build.make demos/CMakeFiles/demo_tutorial_iterators_assignment_3_workshop.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 60%] Building CXX object demos/CMakeFiles/demo_tutorial_iterators_assignment_3_workshop.dir/tutorial/iterators/assignment_3_workshop.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_iterators_assignment_3_workshop.dir/tutorial/iterators/assignment_3_workshop.cpp.o -MF CMakeFiles/demo_tutorial_iterators_assignment_3_workshop.dir/tutorial/iterators/assignment_3_workshop.cpp.o.d -o CMakeFiles/demo_tutorial_iterators_assignment_3_workshop.dir/tutorial/iterators/assignment_3_workshop.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/iterators/assignment_3_workshop.cpp [ 60%] Linking CXX executable ../bin/demo_tutorial_indices_fm_index cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_indices_fm_index.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_indices_fm_index.dir/link.d CMakeFiles/demo_tutorial_indices_fm_index.dir/tutorial/indices/fm_index.cpp.o -o ../bin/demo_tutorial_indices_fm_index -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 60%] Built target demo_tutorial_indices_fm_index make -f demos/CMakeFiles/demo_tutorial_iterators_assignment_3_workshop_solution.dir/build.make demos/CMakeFiles/demo_tutorial_iterators_assignment_3_workshop_solution.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_iterators_assignment_3_workshop_solution.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_iterators_assignment_3_workshop_solution.dir/build.make demos/CMakeFiles/demo_tutorial_iterators_assignment_3_workshop_solution.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 60%] Building CXX object demos/CMakeFiles/demo_tutorial_iterators_assignment_3_workshop_solution.dir/tutorial/iterators/assignment_3_workshop_solution.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_iterators_assignment_3_workshop_solution.dir/tutorial/iterators/assignment_3_workshop_solution.cpp.o -MF CMakeFiles/demo_tutorial_iterators_assignment_3_workshop_solution.dir/tutorial/iterators/assignment_3_workshop_solution.cpp.o.d -o CMakeFiles/demo_tutorial_iterators_assignment_3_workshop_solution.dir/tutorial/iterators/assignment_3_workshop_solution.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/iterators/assignment_3_workshop_solution.cpp [ 60%] Linking CXX executable ../bin/demo_tutorial_iterators_assignment_1_solution cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_iterators_assignment_1_solution.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_iterators_assignment_1_solution.dir/link.d CMakeFiles/demo_tutorial_iterators_assignment_1_solution.dir/tutorial/iterators/assignment_1_solution.cpp.o -o ../bin/demo_tutorial_iterators_assignment_1_solution -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 60%] Built target demo_tutorial_iterators_assignment_1_solution make -f demos/CMakeFiles/demo_tutorial_iterators_assignment_4_workshop_solution.dir/build.make demos/CMakeFiles/demo_tutorial_iterators_assignment_4_workshop_solution.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_iterators_assignment_4_workshop_solution.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_iterators_assignment_4_workshop_solution.dir/build.make demos/CMakeFiles/demo_tutorial_iterators_assignment_4_workshop_solution.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 60%] Linking CXX executable ../bin/demo_tutorial_iterators_assignment_2_solution cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_iterators_assignment_2_solution.dir/link.txt --verbose=1 [ 60%] Building CXX object demos/CMakeFiles/demo_tutorial_iterators_assignment_4_workshop_solution.dir/tutorial/iterators/assignment_4_workshop_solution.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_iterators_assignment_4_workshop_solution.dir/tutorial/iterators/assignment_4_workshop_solution.cpp.o -MF CMakeFiles/demo_tutorial_iterators_assignment_4_workshop_solution.dir/tutorial/iterators/assignment_4_workshop_solution.cpp.o.d -o CMakeFiles/demo_tutorial_iterators_assignment_4_workshop_solution.dir/tutorial/iterators/assignment_4_workshop_solution.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/iterators/assignment_4_workshop_solution.cpp /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_iterators_assignment_2_solution.dir/link.d CMakeFiles/demo_tutorial_iterators_assignment_2_solution.dir/tutorial/iterators/assignment_2_solution.cpp.o -o ../bin/demo_tutorial_iterators_assignment_2_solution -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 60%] Built target demo_tutorial_iterators_assignment_2_solution make -f demos/CMakeFiles/demo_tutorial_iterators_base.dir/build.make demos/CMakeFiles/demo_tutorial_iterators_base.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_iterators_base.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_iterators_base.dir/build.make demos/CMakeFiles/demo_tutorial_iterators_base.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 60%] Building CXX object demos/CMakeFiles/demo_tutorial_iterators_base.dir/tutorial/iterators/base.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_iterators_base.dir/tutorial/iterators/base.cpp.o -MF CMakeFiles/demo_tutorial_iterators_base.dir/tutorial/iterators/base.cpp.o.d -o CMakeFiles/demo_tutorial_iterators_base.dir/tutorial/iterators/base.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/iterators/base.cpp [ 61%] Linking CXX executable ../../bin/yara_mapper cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/yara && /usr/bin/cmake -E cmake_link_script CMakeFiles/yara_mapper.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. [ 62%] Linking CXX executable ../bin/demo_tutorial_iterators_base cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_iterators_base.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_iterators_base.dir/link.d CMakeFiles/demo_tutorial_iterators_base.dir/tutorial/iterators/base.cpp.o -o ../bin/demo_tutorial_iterators_base -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 62%] Built target demo_tutorial_iterators_base make -f demos/CMakeFiles/demo_tutorial_iterators_sequence_iterator_demo.dir/build.make demos/CMakeFiles/demo_tutorial_iterators_sequence_iterator_demo.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_iterators_sequence_iterator_demo.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_iterators_sequence_iterator_demo.dir/build.make demos/CMakeFiles/demo_tutorial_iterators_sequence_iterator_demo.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 62%] Building CXX object demos/CMakeFiles/demo_tutorial_iterators_sequence_iterator_demo.dir/tutorial/iterators/sequence_iterator_demo.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_iterators_sequence_iterator_demo.dir/tutorial/iterators/sequence_iterator_demo.cpp.o -MF CMakeFiles/demo_tutorial_iterators_sequence_iterator_demo.dir/tutorial/iterators/sequence_iterator_demo.cpp.o.d -o CMakeFiles/demo_tutorial_iterators_sequence_iterator_demo.dir/tutorial/iterators/sequence_iterator_demo.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/iterators/sequence_iterator_demo.cpp /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/yara_mapper.dir/link.d CMakeFiles/yara_mapper.dir/mapper.cpp.o -o ../../bin/yara_mapper -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 62%] Built target yara_mapper make -f demos/CMakeFiles/demo_tutorial_journaled_set_base.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_set_base.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_journaled_set_base.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_journaled_set_base.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_set_base.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 62%] Building CXX object demos/CMakeFiles/demo_tutorial_journaled_set_base.dir/tutorial/journaled_set/base.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_journaled_set_base.dir/tutorial/journaled_set/base.cpp.o -MF CMakeFiles/demo_tutorial_journaled_set_base.dir/tutorial/journaled_set/base.cpp.o.d -o CMakeFiles/demo_tutorial_journaled_set_base.dir/tutorial/journaled_set/base.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/journaled_set/base.cpp [ 62%] Linking CXX executable ../bin/demo_tutorial_iterators_assignment_3_workshop cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_iterators_assignment_3_workshop.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_iterators_assignment_3_workshop.dir/link.d CMakeFiles/demo_tutorial_iterators_assignment_3_workshop.dir/tutorial/iterators/assignment_3_workshop.cpp.o -o ../bin/demo_tutorial_iterators_assignment_3_workshop -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 62%] Built target demo_tutorial_iterators_assignment_3_workshop make -f demos/CMakeFiles/demo_tutorial_journaled_set_example_join.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_set_example_join.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_journaled_set_example_join.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_journaled_set_example_join.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_set_example_join.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 62%] Building CXX object demos/CMakeFiles/demo_tutorial_journaled_set_example_join.dir/tutorial/journaled_set/example_join.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_journaled_set_example_join.dir/tutorial/journaled_set/example_join.cpp.o -MF CMakeFiles/demo_tutorial_journaled_set_example_join.dir/tutorial/journaled_set/example_join.cpp.o.d -o CMakeFiles/demo_tutorial_journaled_set_example_join.dir/tutorial/journaled_set/example_join.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/journaled_set/example_join.cpp [ 62%] Linking CXX executable ../bin/demo_tutorial_journaled_set_base cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_journaled_set_base.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_journaled_set_base.dir/link.d CMakeFiles/demo_tutorial_journaled_set_base.dir/tutorial/journaled_set/base.cpp.o -o ../bin/demo_tutorial_journaled_set_base -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 62%] Built target demo_tutorial_journaled_set_base make -f demos/CMakeFiles/demo_tutorial_journaled_set_example_journal_string_basic.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_set_example_journal_string_basic.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_journaled_set_example_journal_string_basic.dir/DependInfo.cmake "--color=" [ 62%] Linking CXX executable ../bin/demo_tutorial_iterators_assignment_3_workshop_solution cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_iterators_assignment_3_workshop_solution.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_journaled_set_example_journal_string_basic.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_set_example_journal_string_basic.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 62%] Building CXX object demos/CMakeFiles/demo_tutorial_journaled_set_example_journal_string_basic.dir/tutorial/journaled_set/example_journal_string_basic.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_journaled_set_example_journal_string_basic.dir/tutorial/journaled_set/example_journal_string_basic.cpp.o -MF CMakeFiles/demo_tutorial_journaled_set_example_journal_string_basic.dir/tutorial/journaled_set/example_journal_string_basic.cpp.o.d -o CMakeFiles/demo_tutorial_journaled_set_example_journal_string_basic.dir/tutorial/journaled_set/example_journal_string_basic.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/journaled_set/example_journal_string_basic.cpp /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_iterators_assignment_3_workshop_solution.dir/link.d CMakeFiles/demo_tutorial_iterators_assignment_3_workshop_solution.dir/tutorial/iterators/assignment_3_workshop_solution.cpp.o -o ../bin/demo_tutorial_iterators_assignment_3_workshop_solution -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 62%] Linking CXX executable ../bin/demo_tutorial_iterators_assignment_4_workshop_solution cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_iterators_assignment_4_workshop_solution.dir/link.txt --verbose=1 [ 62%] Built target demo_tutorial_iterators_assignment_3_workshop_solution make -f demos/CMakeFiles/demo_tutorial_journaled_set_example_online_search.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_set_example_online_search.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_journaled_set_example_online_search.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_journaled_set_example_online_search.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_set_example_online_search.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 62%] Building CXX object demos/CMakeFiles/demo_tutorial_journaled_set_example_online_search.dir/tutorial/journaled_set/example_online_search.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_journaled_set_example_online_search.dir/tutorial/journaled_set/example_online_search.cpp.o -MF CMakeFiles/demo_tutorial_journaled_set_example_online_search.dir/tutorial/journaled_set/example_online_search.cpp.o.d -o CMakeFiles/demo_tutorial_journaled_set_example_online_search.dir/tutorial/journaled_set/example_online_search.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/journaled_set/example_online_search.cpp /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_iterators_assignment_4_workshop_solution.dir/link.d CMakeFiles/demo_tutorial_iterators_assignment_4_workshop_solution.dir/tutorial/iterators/assignment_4_workshop_solution.cpp.o -o ../bin/demo_tutorial_iterators_assignment_4_workshop_solution -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 62%] Built target demo_tutorial_iterators_assignment_4_workshop_solution make -f demos/CMakeFiles/demo_tutorial_journaled_set_example_online_search_assignment1_hint.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_set_example_online_search_assignment1_hint.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_journaled_set_example_online_search_assignment1_hint.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_journaled_set_example_online_search_assignment1_hint.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_set_example_online_search_assignment1_hint.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 62%] Building CXX object demos/CMakeFiles/demo_tutorial_journaled_set_example_online_search_assignment1_hint.dir/tutorial/journaled_set/example_online_search_assignment1_hint.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_journaled_set_example_online_search_assignment1_hint.dir/tutorial/journaled_set/example_online_search_assignment1_hint.cpp.o -MF CMakeFiles/demo_tutorial_journaled_set_example_online_search_assignment1_hint.dir/tutorial/journaled_set/example_online_search_assignment1_hint.cpp.o.d -o CMakeFiles/demo_tutorial_journaled_set_example_online_search_assignment1_hint.dir/tutorial/journaled_set/example_online_search_assignment1_hint.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/journaled_set/example_online_search_assignment1_hint.cpp [ 62%] Linking CXX executable ../bin/demo_tutorial_iterators_sequence_iterator_demo cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_iterators_sequence_iterator_demo.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_iterators_sequence_iterator_demo.dir/link.d CMakeFiles/demo_tutorial_iterators_sequence_iterator_demo.dir/tutorial/iterators/sequence_iterator_demo.cpp.o -o ../bin/demo_tutorial_iterators_sequence_iterator_demo -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 62%] Built target demo_tutorial_iterators_sequence_iterator_demo make -f demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment1.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment1.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment1.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 63%] Building CXX object demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment1.dir/tutorial/journaled_set/solution_online_search_assignment1.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment1.dir/tutorial/journaled_set/solution_online_search_assignment1.cpp.o -MF CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment1.dir/tutorial/journaled_set/solution_online_search_assignment1.cpp.o.d -o CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment1.dir/tutorial/journaled_set/solution_online_search_assignment1.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/journaled_set/solution_online_search_assignment1.cpp [ 63%] Linking CXX executable ../bin/demo_tutorial_index_iterators_iterator_solution1 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_index_iterators_iterator_solution1.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_index_iterators_iterator_solution1.dir/link.d CMakeFiles/demo_tutorial_index_iterators_iterator_solution1.dir/tutorial/index_iterators/iterator_solution1.cpp.o -o ../bin/demo_tutorial_index_iterators_iterator_solution1 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 63%] Built target demo_tutorial_index_iterators_iterator_solution1 make -f demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment2.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment2.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment2.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment2.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment2.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 63%] Building CXX object demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment2.dir/tutorial/journaled_set/solution_online_search_assignment2.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment2.dir/tutorial/journaled_set/solution_online_search_assignment2.cpp.o -MF CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment2.dir/tutorial/journaled_set/solution_online_search_assignment2.cpp.o.d -o CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment2.dir/tutorial/journaled_set/solution_online_search_assignment2.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/journaled_set/solution_online_search_assignment2.cpp [ 63%] Linking CXX executable ../bin/demo_tutorial_journaled_set_example_journal_string_basic cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_journaled_set_example_journal_string_basic.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_journaled_set_example_journal_string_basic.dir/link.d CMakeFiles/demo_tutorial_journaled_set_example_journal_string_basic.dir/tutorial/journaled_set/example_journal_string_basic.cpp.o -o ../bin/demo_tutorial_journaled_set_example_journal_string_basic -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 63%] Built target demo_tutorial_journaled_set_example_journal_string_basic make -f demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment3.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment3.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment3.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment3.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment3.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 63%] Building CXX object demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment3.dir/tutorial/journaled_set/solution_online_search_assignment3.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment3.dir/tutorial/journaled_set/solution_online_search_assignment3.cpp.o -MF CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment3.dir/tutorial/journaled_set/solution_online_search_assignment3.cpp.o.d -o CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment3.dir/tutorial/journaled_set/solution_online_search_assignment3.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/journaled_set/solution_online_search_assignment3.cpp [ 63%] Linking CXX executable ../bin/demo_tutorial_journaled_set_example_join cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_journaled_set_example_join.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_journaled_set_example_join.dir/link.d CMakeFiles/demo_tutorial_journaled_set_example_join.dir/tutorial/journaled_set/example_join.cpp.o -o ../bin/demo_tutorial_journaled_set_example_join -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 63%] Built target demo_tutorial_journaled_set_example_join make -f demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment4.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment4.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment4.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment4.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment4.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 63%] Building CXX object demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment4.dir/tutorial/journaled_set/solution_online_search_assignment4.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment4.dir/tutorial/journaled_set/solution_online_search_assignment4.cpp.o -MF CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment4.dir/tutorial/journaled_set/solution_online_search_assignment4.cpp.o.d -o CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment4.dir/tutorial/journaled_set/solution_online_search_assignment4.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/journaled_set/solution_online_search_assignment4.cpp [ 63%] Linking CXX executable ../bin/demo_tutorial_journaled_set_example_online_search_assignment1_hint cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_journaled_set_example_online_search_assignment1_hint.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_journaled_set_example_online_search_assignment1_hint.dir/link.d CMakeFiles/demo_tutorial_journaled_set_example_online_search_assignment1_hint.dir/tutorial/journaled_set/example_online_search_assignment1_hint.cpp.o -o ../bin/demo_tutorial_journaled_set_example_online_search_assignment1_hint -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 63%] Built target demo_tutorial_journaled_set_example_online_search_assignment1_hint make -f demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_finder.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_finder.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_finder.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_finder.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_finder.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 63%] Building CXX object demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_finder.dir/tutorial/journaled_set/solution_online_search_finder.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_journaled_set_solution_online_search_finder.dir/tutorial/journaled_set/solution_online_search_finder.cpp.o -MF CMakeFiles/demo_tutorial_journaled_set_solution_online_search_finder.dir/tutorial/journaled_set/solution_online_search_finder.cpp.o.d -o CMakeFiles/demo_tutorial_journaled_set_solution_online_search_finder.dir/tutorial/journaled_set/solution_online_search_finder.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/journaled_set/solution_online_search_finder.cpp [ 63%] Linking CXX executable ../bin/demo_tutorial_indices_find2_index_approx cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_indices_find2_index_approx.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_indices_find2_index_approx.dir/link.d CMakeFiles/demo_tutorial_indices_find2_index_approx.dir/tutorial/indices/find2_index_approx.cpp.o -o ../bin/demo_tutorial_indices_find2_index_approx -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 63%] Built target demo_tutorial_indices_find2_index_approx make -f demos/CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 63%] Building CXX object demos/CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base.dir/tutorial/journaled_string_tree/journaled_string_tree_base.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base.dir/tutorial/journaled_string_tree/journaled_string_tree_base.cpp.o -MF CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base.dir/tutorial/journaled_string_tree/journaled_string_tree_base.cpp.o.d -o CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base.dir/tutorial/journaled_string_tree/journaled_string_tree_base.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/journaled_string_tree/journaled_string_tree_base.cpp [ 63%] Linking CXX executable ../bin/demo_tutorial_journaled_set_solution_online_search_assignment1 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment1.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment1.dir/link.d CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment1.dir/tutorial/journaled_set/solution_online_search_assignment1.cpp.o -o ../bin/demo_tutorial_journaled_set_solution_online_search_assignment1 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 63%] Built target demo_tutorial_journaled_set_solution_online_search_assignment1 make -f demos/CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base_assignment1.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base_assignment1.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base_assignment1.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 64%] Building CXX object demos/CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base_assignment1.dir/tutorial/journaled_string_tree/journaled_string_tree_base_assignment1.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base_assignment1.dir/tutorial/journaled_string_tree/journaled_string_tree_base_assignment1.cpp.o -MF CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base_assignment1.dir/tutorial/journaled_string_tree/journaled_string_tree_base_assignment1.cpp.o.d -o CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base_assignment1.dir/tutorial/journaled_string_tree/journaled_string_tree_base_assignment1.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/journaled_string_tree/journaled_string_tree_base_assignment1.cpp [ 64%] Linking CXX executable ../bin/demo_tutorial_journaled_set_example_online_search cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_journaled_set_example_online_search.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_journaled_set_example_online_search.dir/link.d CMakeFiles/demo_tutorial_journaled_set_example_online_search.dir/tutorial/journaled_set/example_online_search.cpp.o -o ../bin/demo_tutorial_journaled_set_example_online_search -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 64%] Built target demo_tutorial_journaled_set_example_online_search make -f demos/CMakeFiles/demo_tutorial_metafunctions_assignment1_solution.dir/build.make demos/CMakeFiles/demo_tutorial_metafunctions_assignment1_solution.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_metafunctions_assignment1_solution.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_metafunctions_assignment1_solution.dir/build.make demos/CMakeFiles/demo_tutorial_metafunctions_assignment1_solution.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 64%] Building CXX object demos/CMakeFiles/demo_tutorial_metafunctions_assignment1_solution.dir/tutorial/metafunctions/assignment1_solution.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_metafunctions_assignment1_solution.dir/tutorial/metafunctions/assignment1_solution.cpp.o -MF CMakeFiles/demo_tutorial_metafunctions_assignment1_solution.dir/tutorial/metafunctions/assignment1_solution.cpp.o.d -o CMakeFiles/demo_tutorial_metafunctions_assignment1_solution.dir/tutorial/metafunctions/assignment1_solution.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/metafunctions/assignment1_solution.cpp [ 64%] Linking CXX executable ../bin/demo_tutorial_journaled_set_solution_online_search_assignment2 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment2.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment2.dir/link.d CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment2.dir/tutorial/journaled_set/solution_online_search_assignment2.cpp.o -o ../bin/demo_tutorial_journaled_set_solution_online_search_assignment2 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 64%] Built target demo_tutorial_journaled_set_solution_online_search_assignment2 make -f demos/CMakeFiles/demo_tutorial_metafunctions_base.dir/build.make demos/CMakeFiles/demo_tutorial_metafunctions_base.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_metafunctions_base.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_metafunctions_base.dir/build.make demos/CMakeFiles/demo_tutorial_metafunctions_base.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 64%] Building CXX object demos/CMakeFiles/demo_tutorial_metafunctions_base.dir/tutorial/metafunctions/base.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_metafunctions_base.dir/tutorial/metafunctions/base.cpp.o -MF CMakeFiles/demo_tutorial_metafunctions_base.dir/tutorial/metafunctions/base.cpp.o.d -o CMakeFiles/demo_tutorial_metafunctions_base.dir/tutorial/metafunctions/base.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/metafunctions/base.cpp [ 64%] Linking CXX executable ../bin/demo_tutorial_metafunctions_assignment1_solution cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_metafunctions_assignment1_solution.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_metafunctions_assignment1_solution.dir/link.d CMakeFiles/demo_tutorial_metafunctions_assignment1_solution.dir/tutorial/metafunctions/assignment1_solution.cpp.o -o ../bin/demo_tutorial_metafunctions_assignment1_solution -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 64%] Built target demo_tutorial_metafunctions_assignment1_solution make -f demos/CMakeFiles/demo_tutorial_modifiers_UNUSED_modcomplementdna.dir/build.make demos/CMakeFiles/demo_tutorial_modifiers_UNUSED_modcomplementdna.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_modifiers_UNUSED_modcomplementdna.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_modifiers_UNUSED_modcomplementdna.dir/build.make demos/CMakeFiles/demo_tutorial_modifiers_UNUSED_modcomplementdna.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 64%] Building CXX object demos/CMakeFiles/demo_tutorial_modifiers_UNUSED_modcomplementdna.dir/tutorial/modifiers/UNUSED_modcomplementdna.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_modifiers_UNUSED_modcomplementdna.dir/tutorial/modifiers/UNUSED_modcomplementdna.cpp.o -MF CMakeFiles/demo_tutorial_modifiers_UNUSED_modcomplementdna.dir/tutorial/modifiers/UNUSED_modcomplementdna.cpp.o.d -o CMakeFiles/demo_tutorial_modifiers_UNUSED_modcomplementdna.dir/tutorial/modifiers/UNUSED_modcomplementdna.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/modifiers/UNUSED_modcomplementdna.cpp [ 64%] Linking CXX executable ../bin/demo_tutorial_journaled_string_tree_journaled_string_tree_base cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. [ 64%] Linking CXX executable ../bin/demo_tutorial_metafunctions_base cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_metafunctions_base.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base.dir/link.d CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base.dir/tutorial/journaled_string_tree/journaled_string_tree_base.cpp.o -o ../bin/demo_tutorial_journaled_string_tree_journaled_string_tree_base -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 64%] Built target demo_tutorial_journaled_string_tree_journaled_string_tree_base make -f demos/CMakeFiles/demo_tutorial_modifiers_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_modifiers_assignment1.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_modifiers_assignment1.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_modifiers_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_modifiers_assignment1.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 64%] Building CXX object demos/CMakeFiles/demo_tutorial_modifiers_assignment1.dir/tutorial/modifiers/assignment1.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_modifiers_assignment1.dir/tutorial/modifiers/assignment1.cpp.o -MF CMakeFiles/demo_tutorial_modifiers_assignment1.dir/tutorial/modifiers/assignment1.cpp.o.d -o CMakeFiles/demo_tutorial_modifiers_assignment1.dir/tutorial/modifiers/assignment1.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/modifiers/assignment1.cpp /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_metafunctions_base.dir/link.d CMakeFiles/demo_tutorial_metafunctions_base.dir/tutorial/metafunctions/base.cpp.o -o ../bin/demo_tutorial_metafunctions_base -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 64%] Built target demo_tutorial_metafunctions_base make -f demos/CMakeFiles/demo_tutorial_modifiers_assignment1_solution.dir/build.make demos/CMakeFiles/demo_tutorial_modifiers_assignment1_solution.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_modifiers_assignment1_solution.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_modifiers_assignment1_solution.dir/build.make demos/CMakeFiles/demo_tutorial_modifiers_assignment1_solution.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 64%] Building CXX object demos/CMakeFiles/demo_tutorial_modifiers_assignment1_solution.dir/tutorial/modifiers/assignment1_solution.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_modifiers_assignment1_solution.dir/tutorial/modifiers/assignment1_solution.cpp.o -MF CMakeFiles/demo_tutorial_modifiers_assignment1_solution.dir/tutorial/modifiers/assignment1_solution.cpp.o.d -o CMakeFiles/demo_tutorial_modifiers_assignment1_solution.dir/tutorial/modifiers/assignment1_solution.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/modifiers/assignment1_solution.cpp [ 64%] Linking CXX executable ../bin/demo_tutorial_journaled_set_solution_online_search_assignment3 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment3.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment3.dir/link.d CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment3.dir/tutorial/journaled_set/solution_online_search_assignment3.cpp.o -o ../bin/demo_tutorial_journaled_set_solution_online_search_assignment3 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 64%] Built target demo_tutorial_journaled_set_solution_online_search_assignment3 make -f demos/CMakeFiles/demo_tutorial_modifiers_modreverse.dir/build.make demos/CMakeFiles/demo_tutorial_modifiers_modreverse.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_modifiers_modreverse.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_modifiers_modreverse.dir/build.make demos/CMakeFiles/demo_tutorial_modifiers_modreverse.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 64%] Linking CXX executable ../bin/demo_tutorial_indices_base cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_indices_base.dir/link.txt --verbose=1 [ 65%] Building CXX object demos/CMakeFiles/demo_tutorial_modifiers_modreverse.dir/tutorial/modifiers/modreverse.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_modifiers_modreverse.dir/tutorial/modifiers/modreverse.cpp.o -MF CMakeFiles/demo_tutorial_modifiers_modreverse.dir/tutorial/modifiers/modreverse.cpp.o.d -o CMakeFiles/demo_tutorial_modifiers_modreverse.dir/tutorial/modifiers/modreverse.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/modifiers/modreverse.cpp /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_indices_base.dir/link.d CMakeFiles/demo_tutorial_indices_base.dir/tutorial/indices/base.cpp.o -o ../bin/demo_tutorial_indices_base -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 65%] Built target demo_tutorial_indices_base make -f demos/CMakeFiles/demo_tutorial_modifiers_modview.dir/build.make demos/CMakeFiles/demo_tutorial_modifiers_modview.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_modifiers_modview.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_modifiers_modview.dir/build.make demos/CMakeFiles/demo_tutorial_modifiers_modview.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 65%] Building CXX object demos/CMakeFiles/demo_tutorial_modifiers_modview.dir/tutorial/modifiers/modview.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_modifiers_modview.dir/tutorial/modifiers/modview.cpp.o -MF CMakeFiles/demo_tutorial_modifiers_modview.dir/tutorial/modifiers/modview.cpp.o.d -o CMakeFiles/demo_tutorial_modifiers_modview.dir/tutorial/modifiers/modview.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/modifiers/modview.cpp [ 65%] Linking CXX executable ../bin/demo_tutorial_modifiers_UNUSED_modcomplementdna cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_modifiers_UNUSED_modcomplementdna.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_modifiers_UNUSED_modcomplementdna.dir/link.d CMakeFiles/demo_tutorial_modifiers_UNUSED_modcomplementdna.dir/tutorial/modifiers/UNUSED_modcomplementdna.cpp.o -o ../bin/demo_tutorial_modifiers_UNUSED_modcomplementdna -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 65%] Built target demo_tutorial_modifiers_UNUSED_modcomplementdna make -f demos/CMakeFiles/demo_tutorial_modifiers_nested.dir/build.make demos/CMakeFiles/demo_tutorial_modifiers_nested.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_modifiers_nested.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_modifiers_nested.dir/build.make demos/CMakeFiles/demo_tutorial_modifiers_nested.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 65%] Building CXX object demos/CMakeFiles/demo_tutorial_modifiers_nested.dir/tutorial/modifiers/nested.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_modifiers_nested.dir/tutorial/modifiers/nested.cpp.o -MF CMakeFiles/demo_tutorial_modifiers_nested.dir/tutorial/modifiers/nested.cpp.o.d -o CMakeFiles/demo_tutorial_modifiers_nested.dir/tutorial/modifiers/nested.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/modifiers/nested.cpp [ 65%] Linking CXX executable ../bin/demo_tutorial_modifiers_assignment1 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_modifiers_assignment1.dir/link.txt --verbose=1 [ 65%] Linking CXX executable ../bin/demo_tutorial_modifiers_assignment1_solution cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_modifiers_assignment1_solution.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_modifiers_assignment1.dir/link.d CMakeFiles/demo_tutorial_modifiers_assignment1.dir/tutorial/modifiers/assignment1.cpp.o -o ../bin/demo_tutorial_modifiers_assignment1 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 65%] Built target demo_tutorial_modifiers_assignment1 make -f demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_assignment1.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_assignment1.dir/DependInfo.cmake "--color=" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_modifiers_assignment1_solution.dir/link.d CMakeFiles/demo_tutorial_modifiers_assignment1_solution.dir/tutorial/modifiers/assignment1_solution.cpp.o -o ../bin/demo_tutorial_modifiers_assignment1_solution -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_assignment1.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 65%] Built target demo_tutorial_modifiers_assignment1_solution make -f demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_consensus.dir/build.make demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_consensus.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_consensus.dir/DependInfo.cmake "--color=" [ 65%] Building CXX object demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_assignment1.dir/tutorial/multiple_sequence_alignment/assignment1.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_assignment1.dir/tutorial/multiple_sequence_alignment/assignment1.cpp.o -MF CMakeFiles/demo_tutorial_multiple_sequence_alignment_assignment1.dir/tutorial/multiple_sequence_alignment/assignment1.cpp.o.d -o CMakeFiles/demo_tutorial_multiple_sequence_alignment_assignment1.dir/tutorial/multiple_sequence_alignment/assignment1.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/multiple_sequence_alignment/assignment1.cpp make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_consensus.dir/build.make demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_consensus.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 65%] Building CXX object demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_consensus.dir/tutorial/multiple_sequence_alignment/consensus.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_consensus.dir/tutorial/multiple_sequence_alignment/consensus.cpp.o -MF CMakeFiles/demo_tutorial_multiple_sequence_alignment_consensus.dir/tutorial/multiple_sequence_alignment/consensus.cpp.o.d -o CMakeFiles/demo_tutorial_multiple_sequence_alignment_consensus.dir/tutorial/multiple_sequence_alignment/consensus.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/multiple_sequence_alignment/consensus.cpp [ 65%] Linking CXX executable ../bin/demo_tutorial_modifiers_modview cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_modifiers_modview.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_modifiers_modview.dir/link.d CMakeFiles/demo_tutorial_modifiers_modview.dir/tutorial/modifiers/modview.cpp.o -o ../bin/demo_tutorial_modifiers_modview -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 65%] Built target demo_tutorial_modifiers_modview make -f demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_msa.dir/build.make demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_msa.dir/depend [ 65%] Linking CXX executable ../bin/demo_tutorial_modifiers_modreverse cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_modifiers_modreverse.dir/link.txt --verbose=1 make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_msa.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_msa.dir/build.make demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_msa.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 65%] Building CXX object demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_msa.dir/tutorial/multiple_sequence_alignment/msa.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_multiple_sequence_alignment_msa.dir/tutorial/multiple_sequence_alignment/msa.cpp.o -MF CMakeFiles/demo_tutorial_multiple_sequence_alignment_msa.dir/tutorial/multiple_sequence_alignment/msa.cpp.o.d -o CMakeFiles/demo_tutorial_multiple_sequence_alignment_msa.dir/tutorial/multiple_sequence_alignment/msa.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/multiple_sequence_alignment/msa.cpp /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_modifiers_modreverse.dir/link.d CMakeFiles/demo_tutorial_modifiers_modreverse.dir/tutorial/modifiers/modreverse.cpp.o -o ../bin/demo_tutorial_modifiers_modreverse -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 65%] Built target demo_tutorial_modifiers_modreverse make -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_banded.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_banded.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_banded.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_banded.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_banded.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 65%] Building CXX object demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_banded.dir/tutorial/pairwise_sequence_alignment/alignment_banded.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_banded.dir/tutorial/pairwise_sequence_alignment/alignment_banded.cpp.o -MF CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_banded.dir/tutorial/pairwise_sequence_alignment/alignment_banded.cpp.o.d -o CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_banded.dir/tutorial/pairwise_sequence_alignment/alignment_banded.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/pairwise_sequence_alignment/alignment_banded.cpp [ 65%] Linking CXX executable ../bin/demo_tutorial_modifiers_nested cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_modifiers_nested.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_modifiers_nested.dir/link.d CMakeFiles/demo_tutorial_modifiers_nested.dir/tutorial/modifiers/nested.cpp.o -o ../bin/demo_tutorial_modifiers_nested -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 65%] Built target demo_tutorial_modifiers_nested make -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment1.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment1.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment1.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 65%] Building CXX object demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment1.dir/tutorial/pairwise_sequence_alignment/alignment_global_assignment1.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment1.dir/tutorial/pairwise_sequence_alignment/alignment_global_assignment1.cpp.o -MF CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment1.dir/tutorial/pairwise_sequence_alignment/alignment_global_assignment1.cpp.o.d -o CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment1.dir/tutorial/pairwise_sequence_alignment/alignment_global_assignment1.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/pairwise_sequence_alignment/alignment_global_assignment1.cpp [ 65%] Linking CXX executable ../bin/demo_tutorial_journaled_string_tree_journaled_string_tree_base_assignment1 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base_assignment1.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base_assignment1.dir/link.d CMakeFiles/demo_tutorial_journaled_string_tree_journaled_string_tree_base_assignment1.dir/tutorial/journaled_string_tree/journaled_string_tree_base_assignment1.cpp.o -o ../bin/demo_tutorial_journaled_string_tree_journaled_string_tree_base_assignment1 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 65%] Built target demo_tutorial_journaled_string_tree_journaled_string_tree_base_assignment1 make -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment2.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment2.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment2.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment2.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment2.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 65%] Building CXX object demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment2.dir/tutorial/pairwise_sequence_alignment/alignment_global_assignment2.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment2.dir/tutorial/pairwise_sequence_alignment/alignment_global_assignment2.cpp.o -MF CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment2.dir/tutorial/pairwise_sequence_alignment/alignment_global_assignment2.cpp.o.d -o CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment2.dir/tutorial/pairwise_sequence_alignment/alignment_global_assignment2.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/pairwise_sequence_alignment/alignment_global_assignment2.cpp [ 65%] Linking CXX executable ../bin/demo_tutorial_journaled_set_solution_online_search_assignment4 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment4.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment4.dir/link.d CMakeFiles/demo_tutorial_journaled_set_solution_online_search_assignment4.dir/tutorial/journaled_set/solution_online_search_assignment4.cpp.o -o ../bin/demo_tutorial_journaled_set_solution_online_search_assignment4 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 65%] Built target demo_tutorial_journaled_set_solution_online_search_assignment4 make -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment3.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment3.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment3.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment3.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment3.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 65%] Building CXX object demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment3.dir/tutorial/pairwise_sequence_alignment/alignment_global_assignment3.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment3.dir/tutorial/pairwise_sequence_alignment/alignment_global_assignment3.cpp.o -MF CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment3.dir/tutorial/pairwise_sequence_alignment/alignment_global_assignment3.cpp.o.d -o CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment3.dir/tutorial/pairwise_sequence_alignment/alignment_global_assignment3.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/pairwise_sequence_alignment/alignment_global_assignment3.cpp [ 65%] Linking CXX executable ../bin/demo_tutorial_journaled_set_solution_online_search_finder cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_journaled_set_solution_online_search_finder.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_journaled_set_solution_online_search_finder.dir/link.d CMakeFiles/demo_tutorial_journaled_set_solution_online_search_finder.dir/tutorial/journaled_set/solution_online_search_finder.cpp.o -o ../bin/demo_tutorial_journaled_set_solution_online_search_finder -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 65%] Built target demo_tutorial_journaled_set_solution_online_search_finder make -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_overlap.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_overlap.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_overlap.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_overlap.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_overlap.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 65%] Building CXX object demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_overlap.dir/tutorial/pairwise_sequence_alignment/alignment_global_overlap.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_overlap.dir/tutorial/pairwise_sequence_alignment/alignment_global_overlap.cpp.o -MF CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_overlap.dir/tutorial/pairwise_sequence_alignment/alignment_global_overlap.cpp.o.d -o CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_overlap.dir/tutorial/pairwise_sequence_alignment/alignment_global_overlap.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/pairwise_sequence_alignment/alignment_global_overlap.cpp [ 67%] Linking CXX executable ../bin/demo_tutorial_pairwise_sequence_alignment_alignment_banded cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_banded.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. [ 67%] Linking CXX executable ../bin/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment1 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment1.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_banded.dir/link.d CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_banded.dir/tutorial/pairwise_sequence_alignment/alignment_banded.cpp.o -o ../bin/demo_tutorial_pairwise_sequence_alignment_alignment_banded -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 67%] Built target demo_tutorial_pairwise_sequence_alignment_alignment_banded make -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_specialised.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_specialised.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_specialised.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_specialised.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_specialised.dir/build /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 67%] Building CXX object demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_specialised.dir/tutorial/pairwise_sequence_alignment/alignment_global_specialised.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_specialised.dir/tutorial/pairwise_sequence_alignment/alignment_global_specialised.cpp.o -MF CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_specialised.dir/tutorial/pairwise_sequence_alignment/alignment_global_specialised.cpp.o.d -o CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_specialised.dir/tutorial/pairwise_sequence_alignment/alignment_global_specialised.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/pairwise_sequence_alignment/alignment_global_specialised.cpp /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment1.dir/link.d CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment1.dir/tutorial/pairwise_sequence_alignment/alignment_global_assignment1.cpp.o -o ../bin/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment1 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 67%] Built target demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment1 make -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_standard.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_standard.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_standard.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_standard.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_standard.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 67%] Building CXX object demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_standard.dir/tutorial/pairwise_sequence_alignment/alignment_global_standard.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_standard.dir/tutorial/pairwise_sequence_alignment/alignment_global_standard.cpp.o -MF CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_standard.dir/tutorial/pairwise_sequence_alignment/alignment_global_standard.cpp.o.d -o CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_standard.dir/tutorial/pairwise_sequence_alignment/alignment_global_standard.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/pairwise_sequence_alignment/alignment_global_standard.cpp [ 67%] Linking CXX executable ../bin/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment3 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment3.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment3.dir/link.d CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment3.dir/tutorial/pairwise_sequence_alignment/alignment_global_assignment3.cpp.o -o ../bin/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment3 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 67%] Built target demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment3 make -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 67%] Building CXX object demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local.dir/tutorial/pairwise_sequence_alignment/alignment_local.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local.dir/tutorial/pairwise_sequence_alignment/alignment_local.cpp.o -MF CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local.dir/tutorial/pairwise_sequence_alignment/alignment_local.cpp.o.d -o CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local.dir/tutorial/pairwise_sequence_alignment/alignment_local.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/pairwise_sequence_alignment/alignment_local.cpp [ 67%] Linking CXX executable ../bin/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment2 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment2.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment2.dir/link.d CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment2.dir/tutorial/pairwise_sequence_alignment/alignment_global_assignment2.cpp.o -o ../bin/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment2 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 67%] Built target demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment2 make -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local_assignment1.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local_assignment1.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local_assignment1.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 67%] Building CXX object demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local_assignment1.dir/tutorial/pairwise_sequence_alignment/alignment_local_assignment1.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local_assignment1.dir/tutorial/pairwise_sequence_alignment/alignment_local_assignment1.cpp.o -MF CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local_assignment1.dir/tutorial/pairwise_sequence_alignment/alignment_local_assignment1.cpp.o.d -o CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local_assignment1.dir/tutorial/pairwise_sequence_alignment/alignment_local_assignment1.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/pairwise_sequence_alignment/alignment_local_assignment1.cpp [ 67%] Linking CXX executable ../bin/demo_tutorial_pairwise_sequence_alignment_alignment_global_specialised cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_specialised.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_specialised.dir/link.d CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_specialised.dir/tutorial/pairwise_sequence_alignment/alignment_global_specialised.cpp.o -o ../bin/demo_tutorial_pairwise_sequence_alignment_alignment_global_specialised -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 67%] Built target demo_tutorial_pairwise_sequence_alignment_alignment_global_specialised make -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 67%] Building CXX object demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5.dir/tutorial/pairwise_sequence_alignment/assignment5.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5.dir/tutorial/pairwise_sequence_alignment/assignment5.cpp.o -MF CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5.dir/tutorial/pairwise_sequence_alignment/assignment5.cpp.o.d -o CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5.dir/tutorial/pairwise_sequence_alignment/assignment5.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/pairwise_sequence_alignment/assignment5.cpp [ 68%] Linking CXX executable ../bin/demo_tutorial_pairwise_sequence_alignment_alignment_global_standard cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_standard.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_standard.dir/link.d CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_standard.dir/tutorial/pairwise_sequence_alignment/alignment_global_standard.cpp.o -o ../bin/demo_tutorial_pairwise_sequence_alignment_alignment_global_standard -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 68%] Built target demo_tutorial_pairwise_sequence_alignment_alignment_global_standard make -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step1.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step1.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step1.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step1.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step1.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 68%] Building CXX object demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step1.dir/tutorial/pairwise_sequence_alignment/assignment5_step1.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step1.dir/tutorial/pairwise_sequence_alignment/assignment5_step1.cpp.o -MF CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step1.dir/tutorial/pairwise_sequence_alignment/assignment5_step1.cpp.o.d -o CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step1.dir/tutorial/pairwise_sequence_alignment/assignment5_step1.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/pairwise_sequence_alignment/assignment5_step1.cpp [ 68%] Linking CXX executable ../bin/demo_tutorial_pairwise_sequence_alignment_alignment_global_overlap cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_overlap.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_overlap.dir/link.d CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_global_overlap.dir/tutorial/pairwise_sequence_alignment/alignment_global_overlap.cpp.o -o ../bin/demo_tutorial_pairwise_sequence_alignment_alignment_global_overlap -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 68%] Built target demo_tutorial_pairwise_sequence_alignment_alignment_global_overlap make -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step2.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step2.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step2.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step2.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step2.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 68%] Building CXX object demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step2.dir/tutorial/pairwise_sequence_alignment/assignment5_step2.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step2.dir/tutorial/pairwise_sequence_alignment/assignment5_step2.cpp.o -MF CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step2.dir/tutorial/pairwise_sequence_alignment/assignment5_step2.cpp.o.d -o CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step2.dir/tutorial/pairwise_sequence_alignment/assignment5_step2.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/pairwise_sequence_alignment/assignment5_step2.cpp [ 68%] Linking CXX executable ../bin/demo_tutorial_pairwise_sequence_alignment_assignment5_step1 [ 68%] Linking CXX executable ../bin/demo_tutorial_pairwise_sequence_alignment_alignment_local cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local.dir/link.txt --verbose=1 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step1.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step1.dir/link.d CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step1.dir/tutorial/pairwise_sequence_alignment/assignment5_step1.cpp.o -o ../bin/demo_tutorial_pairwise_sequence_alignment_assignment5_step1 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local.dir/link.d CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local.dir/tutorial/pairwise_sequence_alignment/alignment_local.cpp.o -o ../bin/demo_tutorial_pairwise_sequence_alignment_alignment_local -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 68%] Built target demo_tutorial_pairwise_sequence_alignment_assignment5_step1 make -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step3.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step3.dir/depend [ 68%] Built target demo_tutorial_pairwise_sequence_alignment_alignment_local make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step3.dir/DependInfo.cmake "--color=" make -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step4.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step4.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step4.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step3.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step3.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step4.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step4.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 68%] Building CXX object demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step3.dir/tutorial/pairwise_sequence_alignment/assignment5_step3.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step3.dir/tutorial/pairwise_sequence_alignment/assignment5_step3.cpp.o -MF CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step3.dir/tutorial/pairwise_sequence_alignment/assignment5_step3.cpp.o.d -o CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step3.dir/tutorial/pairwise_sequence_alignment/assignment5_step3.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/pairwise_sequence_alignment/assignment5_step3.cpp [ 68%] Building CXX object demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step4.dir/tutorial/pairwise_sequence_alignment/assignment5_step4.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step4.dir/tutorial/pairwise_sequence_alignment/assignment5_step4.cpp.o -MF CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step4.dir/tutorial/pairwise_sequence_alignment/assignment5_step4.cpp.o.d -o CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step4.dir/tutorial/pairwise_sequence_alignment/assignment5_step4.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/pairwise_sequence_alignment/assignment5_step4.cpp [ 68%] Linking CXX executable ../bin/demo_tutorial_pairwise_sequence_alignment_alignment_local_assignment1 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local_assignment1.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local_assignment1.dir/link.d CMakeFiles/demo_tutorial_pairwise_sequence_alignment_alignment_local_assignment1.dir/tutorial/pairwise_sequence_alignment/alignment_local_assignment1.cpp.o -o ../bin/demo_tutorial_pairwise_sequence_alignment_alignment_local_assignment1 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 68%] Built target demo_tutorial_pairwise_sequence_alignment_alignment_local_assignment1 make -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step5.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step5.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step5.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step5.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step5.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 68%] Building CXX object demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step5.dir/tutorial/pairwise_sequence_alignment/assignment5_step5.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step5.dir/tutorial/pairwise_sequence_alignment/assignment5_step5.cpp.o -MF CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step5.dir/tutorial/pairwise_sequence_alignment/assignment5_step5.cpp.o.d -o CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step5.dir/tutorial/pairwise_sequence_alignment/assignment5_step5.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/pairwise_sequence_alignment/assignment5_step5.cpp [ 68%] Linking CXX executable ../bin/demo_tutorial_pairwise_sequence_alignment_assignment5 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5.dir/link.d CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5.dir/tutorial/pairwise_sequence_alignment/assignment5.cpp.o -o ../bin/demo_tutorial_pairwise_sequence_alignment_assignment5 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 68%] Built target demo_tutorial_pairwise_sequence_alignment_assignment5 make -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step6.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step6.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step6.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step6.dir/build.make demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step6.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 68%] Building CXX object demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step6.dir/tutorial/pairwise_sequence_alignment/assignment5_step6.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step6.dir/tutorial/pairwise_sequence_alignment/assignment5_step6.cpp.o -MF CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step6.dir/tutorial/pairwise_sequence_alignment/assignment5_step6.cpp.o.d -o CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step6.dir/tutorial/pairwise_sequence_alignment/assignment5_step6.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/pairwise_sequence_alignment/assignment5_step6.cpp [ 68%] Linking CXX executable ../bin/demo_tutorial_pairwise_sequence_alignment_assignment5_step2 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step2.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step2.dir/link.d CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step2.dir/tutorial/pairwise_sequence_alignment/assignment5_step2.cpp.o -o ../bin/demo_tutorial_pairwise_sequence_alignment_assignment5_step2 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 68%] Built target demo_tutorial_pairwise_sequence_alignment_assignment5_step2 make -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment2_solution.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment2_solution.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment2_solution.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment2_solution.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment2_solution.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 68%] Building CXX object demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment2_solution.dir/tutorial/parsing_command_line_arguments/assignment2_solution.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment2_solution.dir/tutorial/parsing_command_line_arguments/assignment2_solution.cpp.o -MF CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment2_solution.dir/tutorial/parsing_command_line_arguments/assignment2_solution.cpp.o.d -o CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment2_solution.dir/tutorial/parsing_command_line_arguments/assignment2_solution.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/parsing_command_line_arguments/assignment2_solution.cpp [ 69%] Linking CXX executable ../bin/demo_tutorial_pairwise_sequence_alignment_assignment5_step3 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step3.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step3.dir/link.d CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step3.dir/tutorial/pairwise_sequence_alignment/assignment5_step3.cpp.o -o ../bin/demo_tutorial_pairwise_sequence_alignment_assignment5_step3 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 69%] Built target demo_tutorial_pairwise_sequence_alignment_assignment5_step3 make -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment3_solution.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment3_solution.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment3_solution.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment3_solution.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment3_solution.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 69%] Building CXX object demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment3_solution.dir/tutorial/parsing_command_line_arguments/assignment3_solution.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment3_solution.dir/tutorial/parsing_command_line_arguments/assignment3_solution.cpp.o -MF CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment3_solution.dir/tutorial/parsing_command_line_arguments/assignment3_solution.cpp.o.d -o CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment3_solution.dir/tutorial/parsing_command_line_arguments/assignment3_solution.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/parsing_command_line_arguments/assignment3_solution.cpp [ 69%] Linking CXX executable ../bin/demo_tutorial_pairwise_sequence_alignment_assignment5_step4 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step4.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step4.dir/link.d CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step4.dir/tutorial/pairwise_sequence_alignment/assignment5_step4.cpp.o -o ../bin/demo_tutorial_pairwise_sequence_alignment_assignment5_step4 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 69%] Built target demo_tutorial_pairwise_sequence_alignment_assignment5_step4 make -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment4_solution.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment4_solution.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment4_solution.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment4_solution.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment4_solution.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 69%] Building CXX object demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment4_solution.dir/tutorial/parsing_command_line_arguments/assignment4_solution.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment4_solution.dir/tutorial/parsing_command_line_arguments/assignment4_solution.cpp.o -MF CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment4_solution.dir/tutorial/parsing_command_line_arguments/assignment4_solution.cpp.o.d -o CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment4_solution.dir/tutorial/parsing_command_line_arguments/assignment4_solution.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/parsing_command_line_arguments/assignment4_solution.cpp [ 69%] Linking CXX executable ../bin/demo_tutorial_pairwise_sequence_alignment_assignment5_step5 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step5.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step5.dir/link.d CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step5.dir/tutorial/pairwise_sequence_alignment/assignment5_step5.cpp.o -o ../bin/demo_tutorial_pairwise_sequence_alignment_assignment5_step5 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 69%] Built target demo_tutorial_pairwise_sequence_alignment_assignment5_step5 make -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment5_solution.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment5_solution.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment5_solution.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment5_solution.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment5_solution.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 70%] Building CXX object demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment5_solution.dir/tutorial/parsing_command_line_arguments/assignment5_solution.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment5_solution.dir/tutorial/parsing_command_line_arguments/assignment5_solution.cpp.o -MF CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment5_solution.dir/tutorial/parsing_command_line_arguments/assignment5_solution.cpp.o.d -o CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment5_solution.dir/tutorial/parsing_command_line_arguments/assignment5_solution.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/parsing_command_line_arguments/assignment5_solution.cpp [ 70%] Linking CXX executable ../bin/demo_tutorial_multiple_sequence_alignment_assignment1 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_multiple_sequence_alignment_assignment1.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_multiple_sequence_alignment_assignment1.dir/link.d CMakeFiles/demo_tutorial_multiple_sequence_alignment_assignment1.dir/tutorial/multiple_sequence_alignment/assignment1.cpp.o -o ../bin/demo_tutorial_multiple_sequence_alignment_assignment1 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 70%] Built target demo_tutorial_multiple_sequence_alignment_assignment1 make -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment6_solution.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment6_solution.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment6_solution.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment6_solution.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment6_solution.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 70%] Building CXX object demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment6_solution.dir/tutorial/parsing_command_line_arguments/assignment6_solution.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment6_solution.dir/tutorial/parsing_command_line_arguments/assignment6_solution.cpp.o -MF CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment6_solution.dir/tutorial/parsing_command_line_arguments/assignment6_solution.cpp.o.d -o CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment6_solution.dir/tutorial/parsing_command_line_arguments/assignment6_solution.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/parsing_command_line_arguments/assignment6_solution.cpp [ 70%] Linking CXX executable ../bin/demo_tutorial_pairwise_sequence_alignment_assignment5_step6 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step6.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step6.dir/link.d CMakeFiles/demo_tutorial_pairwise_sequence_alignment_assignment5_step6.dir/tutorial/pairwise_sequence_alignment/assignment5_step6.cpp.o -o ../bin/demo_tutorial_pairwise_sequence_alignment_assignment5_step6 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 70%] Built target demo_tutorial_pairwise_sequence_alignment_assignment5_step6 make -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_base.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_base.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_base.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_base.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_base.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 70%] Building CXX object demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_base.dir/tutorial/parsing_command_line_arguments/base.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_base.dir/tutorial/parsing_command_line_arguments/base.cpp.o -MF CMakeFiles/demo_tutorial_parsing_command_line_arguments_base.dir/tutorial/parsing_command_line_arguments/base.cpp.o.d -o CMakeFiles/demo_tutorial_parsing_command_line_arguments_base.dir/tutorial/parsing_command_line_arguments/base.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/parsing_command_line_arguments/base.cpp [ 70%] Linking CXX executable ../bin/demo_tutorial_multiple_sequence_alignment_consensus cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_multiple_sequence_alignment_consensus.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_multiple_sequence_alignment_consensus.dir/link.d CMakeFiles/demo_tutorial_multiple_sequence_alignment_consensus.dir/tutorial/multiple_sequence_alignment/consensus.cpp.o -o ../bin/demo_tutorial_multiple_sequence_alignment_consensus -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 70%] Built target demo_tutorial_multiple_sequence_alignment_consensus make -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example1.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example1.dir/depend [ 70%] Linking CXX executable ../bin/demo_tutorial_multiple_sequence_alignment_msa cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_multiple_sequence_alignment_msa.dir/link.txt --verbose=1 make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example1.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example1.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example1.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 70%] Building CXX object demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example1.dir/tutorial/parsing_command_line_arguments/example1.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example1.dir/tutorial/parsing_command_line_arguments/example1.cpp.o -MF CMakeFiles/demo_tutorial_parsing_command_line_arguments_example1.dir/tutorial/parsing_command_line_arguments/example1.cpp.o.d -o CMakeFiles/demo_tutorial_parsing_command_line_arguments_example1.dir/tutorial/parsing_command_line_arguments/example1.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/parsing_command_line_arguments/example1.cpp /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_multiple_sequence_alignment_msa.dir/link.d CMakeFiles/demo_tutorial_multiple_sequence_alignment_msa.dir/tutorial/multiple_sequence_alignment/msa.cpp.o -o ../bin/demo_tutorial_multiple_sequence_alignment_msa -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 70%] Built target demo_tutorial_multiple_sequence_alignment_msa make -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example1_detailed.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example1_detailed.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example1_detailed.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example1_detailed.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example1_detailed.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 70%] Building CXX object demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example1_detailed.dir/tutorial/parsing_command_line_arguments/example1_detailed.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example1_detailed.dir/tutorial/parsing_command_line_arguments/example1_detailed.cpp.o -MF CMakeFiles/demo_tutorial_parsing_command_line_arguments_example1_detailed.dir/tutorial/parsing_command_line_arguments/example1_detailed.cpp.o.d -o CMakeFiles/demo_tutorial_parsing_command_line_arguments_example1_detailed.dir/tutorial/parsing_command_line_arguments/example1_detailed.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/parsing_command_line_arguments/example1_detailed.cpp [ 70%] Linking CXX executable ../bin/demo_tutorial_parsing_command_line_arguments_base cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_parsing_command_line_arguments_base.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_parsing_command_line_arguments_base.dir/link.d CMakeFiles/demo_tutorial_parsing_command_line_arguments_base.dir/tutorial/parsing_command_line_arguments/base.cpp.o -o ../bin/demo_tutorial_parsing_command_line_arguments_base -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 70%] Built target demo_tutorial_parsing_command_line_arguments_base make -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_modifyString.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_modifyString.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_modifyString.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_modifyString.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_modifyString.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 70%] Building CXX object demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_modifyString.dir/tutorial/parsing_command_line_arguments/example_with_modifyString.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_modifyString.dir/tutorial/parsing_command_line_arguments/example_with_modifyString.cpp.o -MF CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_modifyString.dir/tutorial/parsing_command_line_arguments/example_with_modifyString.cpp.o.d -o CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_modifyString.dir/tutorial/parsing_command_line_arguments/example_with_modifyString.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/parsing_command_line_arguments/example_with_modifyString.cpp [ 70%] Linking CXX executable ../bin/demo_tutorial_parsing_command_line_arguments_assignment2_solution cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment2_solution.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment2_solution.dir/link.d CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment2_solution.dir/tutorial/parsing_command_line_arguments/assignment2_solution.cpp.o -o ../bin/demo_tutorial_parsing_command_line_arguments_assignment2_solution -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 70%] Built target demo_tutorial_parsing_command_line_arguments_assignment2_solution make -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_own_function.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_own_function.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_own_function.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_own_function.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_own_function.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 71%] Building CXX object demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_own_function.dir/tutorial/parsing_command_line_arguments/example_with_own_function.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_own_function.dir/tutorial/parsing_command_line_arguments/example_with_own_function.cpp.o -MF CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_own_function.dir/tutorial/parsing_command_line_arguments/example_with_own_function.cpp.o.d -o CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_own_function.dir/tutorial/parsing_command_line_arguments/example_with_own_function.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/parsing_command_line_arguments/example_with_own_function.cpp [ 71%] Linking CXX executable ../bin/demo_tutorial_parsing_command_line_arguments_assignment3_solution cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment3_solution.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment3_solution.dir/link.d CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment3_solution.dir/tutorial/parsing_command_line_arguments/assignment3_solution.cpp.o -o ../bin/demo_tutorial_parsing_command_line_arguments_assignment3_solution -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 71%] Built target demo_tutorial_parsing_command_line_arguments_assignment3_solution make -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_struct.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_struct.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_struct.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_struct.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_struct.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 71%] Building CXX object demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_struct.dir/tutorial/parsing_command_line_arguments/example_with_struct.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_struct.dir/tutorial/parsing_command_line_arguments/example_with_struct.cpp.o -MF CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_struct.dir/tutorial/parsing_command_line_arguments/example_with_struct.cpp.o.d -o CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_struct.dir/tutorial/parsing_command_line_arguments/example_with_struct.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/parsing_command_line_arguments/example_with_struct.cpp [ 71%] Linking CXX executable ../bin/demo_tutorial_parsing_command_line_arguments_assignment4_solution cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment4_solution.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment4_solution.dir/link.d CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment4_solution.dir/tutorial/parsing_command_line_arguments/assignment4_solution.cpp.o -o ../bin/demo_tutorial_parsing_command_line_arguments_assignment4_solution -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 71%] Built target demo_tutorial_parsing_command_line_arguments_assignment4_solution make -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_final_solution.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_final_solution.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_final_solution.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_final_solution.dir/build.make demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_final_solution.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 71%] Building CXX object demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_final_solution.dir/tutorial/parsing_command_line_arguments/final_solution.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_parsing_command_line_arguments_final_solution.dir/tutorial/parsing_command_line_arguments/final_solution.cpp.o -MF CMakeFiles/demo_tutorial_parsing_command_line_arguments_final_solution.dir/tutorial/parsing_command_line_arguments/final_solution.cpp.o.d -o CMakeFiles/demo_tutorial_parsing_command_line_arguments_final_solution.dir/tutorial/parsing_command_line_arguments/final_solution.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/parsing_command_line_arguments/final_solution.cpp [ 71%] Linking CXX executable ../bin/demo_tutorial_parsing_command_line_arguments_assignment5_solution cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment5_solution.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment5_solution.dir/link.d CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment5_solution.dir/tutorial/parsing_command_line_arguments/assignment5_solution.cpp.o -o ../bin/demo_tutorial_parsing_command_line_arguments_assignment5_solution -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 71%] Built target demo_tutorial_parsing_command_line_arguments_assignment5_solution make -f demos/CMakeFiles/demo_tutorial_pattern_matching_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_pattern_matching_assignment1.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_pattern_matching_assignment1.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_pattern_matching_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_pattern_matching_assignment1.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 71%] Building CXX object demos/CMakeFiles/demo_tutorial_pattern_matching_assignment1.dir/tutorial/pattern_matching/assignment1.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_pattern_matching_assignment1.dir/tutorial/pattern_matching/assignment1.cpp.o -MF CMakeFiles/demo_tutorial_pattern_matching_assignment1.dir/tutorial/pattern_matching/assignment1.cpp.o.d -o CMakeFiles/demo_tutorial_pattern_matching_assignment1.dir/tutorial/pattern_matching/assignment1.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/pattern_matching/assignment1.cpp [ 71%] Linking CXX executable ../bin/demo_tutorial_pattern_matching_assignment1 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_pattern_matching_assignment1.dir/link.txt --verbose=1 [ 71%] Linking CXX executable ../bin/demo_tutorial_parsing_command_line_arguments_assignment6_solution cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment6_solution.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_pattern_matching_assignment1.dir/link.d CMakeFiles/demo_tutorial_pattern_matching_assignment1.dir/tutorial/pattern_matching/assignment1.cpp.o -o ../bin/demo_tutorial_pattern_matching_assignment1 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 71%] Built target demo_tutorial_pattern_matching_assignment1 make -f demos/CMakeFiles/demo_tutorial_pattern_matching_assignment1_solution.dir/build.make demos/CMakeFiles/demo_tutorial_pattern_matching_assignment1_solution.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_pattern_matching_assignment1_solution.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_pattern_matching_assignment1_solution.dir/build.make demos/CMakeFiles/demo_tutorial_pattern_matching_assignment1_solution.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 71%] Building CXX object demos/CMakeFiles/demo_tutorial_pattern_matching_assignment1_solution.dir/tutorial/pattern_matching/assignment1_solution.cpp.o /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment6_solution.dir/link.d CMakeFiles/demo_tutorial_parsing_command_line_arguments_assignment6_solution.dir/tutorial/parsing_command_line_arguments/assignment6_solution.cpp.o -o ../bin/demo_tutorial_parsing_command_line_arguments_assignment6_solution -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_pattern_matching_assignment1_solution.dir/tutorial/pattern_matching/assignment1_solution.cpp.o -MF CMakeFiles/demo_tutorial_pattern_matching_assignment1_solution.dir/tutorial/pattern_matching/assignment1_solution.cpp.o.d -o CMakeFiles/demo_tutorial_pattern_matching_assignment1_solution.dir/tutorial/pattern_matching/assignment1_solution.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/pattern_matching/assignment1_solution.cpp make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 71%] Built target demo_tutorial_parsing_command_line_arguments_assignment6_solution make -f demos/CMakeFiles/demo_tutorial_pattern_matching_assignment2.dir/build.make demos/CMakeFiles/demo_tutorial_pattern_matching_assignment2.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_pattern_matching_assignment2.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_pattern_matching_assignment2.dir/build.make demos/CMakeFiles/demo_tutorial_pattern_matching_assignment2.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 71%] Building CXX object demos/CMakeFiles/demo_tutorial_pattern_matching_assignment2.dir/tutorial/pattern_matching/assignment2.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_pattern_matching_assignment2.dir/tutorial/pattern_matching/assignment2.cpp.o -MF CMakeFiles/demo_tutorial_pattern_matching_assignment2.dir/tutorial/pattern_matching/assignment2.cpp.o.d -o CMakeFiles/demo_tutorial_pattern_matching_assignment2.dir/tutorial/pattern_matching/assignment2.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/pattern_matching/assignment2.cpp [ 71%] Linking CXX executable ../bin/demo_tutorial_parsing_command_line_arguments_example1 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_parsing_command_line_arguments_example1.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_parsing_command_line_arguments_example1.dir/link.d CMakeFiles/demo_tutorial_parsing_command_line_arguments_example1.dir/tutorial/parsing_command_line_arguments/example1.cpp.o -o ../bin/demo_tutorial_parsing_command_line_arguments_example1 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 71%] Built target demo_tutorial_parsing_command_line_arguments_example1 make -f demos/CMakeFiles/demo_tutorial_pattern_matching_assignment2_solution.dir/build.make demos/CMakeFiles/demo_tutorial_pattern_matching_assignment2_solution.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_pattern_matching_assignment2_solution.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_pattern_matching_assignment2_solution.dir/build.make demos/CMakeFiles/demo_tutorial_pattern_matching_assignment2_solution.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 72%] Building CXX object demos/CMakeFiles/demo_tutorial_pattern_matching_assignment2_solution.dir/tutorial/pattern_matching/assignment2_solution.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_pattern_matching_assignment2_solution.dir/tutorial/pattern_matching/assignment2_solution.cpp.o -MF CMakeFiles/demo_tutorial_pattern_matching_assignment2_solution.dir/tutorial/pattern_matching/assignment2_solution.cpp.o.d -o CMakeFiles/demo_tutorial_pattern_matching_assignment2_solution.dir/tutorial/pattern_matching/assignment2_solution.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/pattern_matching/assignment2_solution.cpp [ 72%] Linking CXX executable ../bin/demo_tutorial_parsing_command_line_arguments_example1_detailed cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_parsing_command_line_arguments_example1_detailed.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_parsing_command_line_arguments_example1_detailed.dir/link.d CMakeFiles/demo_tutorial_parsing_command_line_arguments_example1_detailed.dir/tutorial/parsing_command_line_arguments/example1_detailed.cpp.o -o ../bin/demo_tutorial_parsing_command_line_arguments_example1_detailed -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 72%] Built target demo_tutorial_parsing_command_line_arguments_example1_detailed make -f demos/CMakeFiles/demo_tutorial_pattern_matching_assignment3.dir/build.make demos/CMakeFiles/demo_tutorial_pattern_matching_assignment3.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_pattern_matching_assignment3.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_pattern_matching_assignment3.dir/build.make demos/CMakeFiles/demo_tutorial_pattern_matching_assignment3.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 72%] Building CXX object demos/CMakeFiles/demo_tutorial_pattern_matching_assignment3.dir/tutorial/pattern_matching/assignment3.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_pattern_matching_assignment3.dir/tutorial/pattern_matching/assignment3.cpp.o -MF CMakeFiles/demo_tutorial_pattern_matching_assignment3.dir/tutorial/pattern_matching/assignment3.cpp.o.d -o CMakeFiles/demo_tutorial_pattern_matching_assignment3.dir/tutorial/pattern_matching/assignment3.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/pattern_matching/assignment3.cpp [ 72%] Linking CXX executable ../bin/demo_tutorial_pattern_matching_assignment2 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_pattern_matching_assignment2.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_pattern_matching_assignment2.dir/link.d CMakeFiles/demo_tutorial_pattern_matching_assignment2.dir/tutorial/pattern_matching/assignment2.cpp.o -o ../bin/demo_tutorial_pattern_matching_assignment2 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 72%] Built target demo_tutorial_pattern_matching_assignment2 make -f demos/CMakeFiles/demo_tutorial_pattern_matching_assignment3_solution.dir/build.make demos/CMakeFiles/demo_tutorial_pattern_matching_assignment3_solution.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_pattern_matching_assignment3_solution.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_pattern_matching_assignment3_solution.dir/build.make demos/CMakeFiles/demo_tutorial_pattern_matching_assignment3_solution.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 72%] Building CXX object demos/CMakeFiles/demo_tutorial_pattern_matching_assignment3_solution.dir/tutorial/pattern_matching/assignment3_solution.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_pattern_matching_assignment3_solution.dir/tutorial/pattern_matching/assignment3_solution.cpp.o -MF CMakeFiles/demo_tutorial_pattern_matching_assignment3_solution.dir/tutorial/pattern_matching/assignment3_solution.cpp.o.d -o CMakeFiles/demo_tutorial_pattern_matching_assignment3_solution.dir/tutorial/pattern_matching/assignment3_solution.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/pattern_matching/assignment3_solution.cpp [ 72%] Linking CXX executable ../bin/demo_tutorial_pattern_matching_assignment1_solution cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_pattern_matching_assignment1_solution.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_pattern_matching_assignment1_solution.dir/link.d CMakeFiles/demo_tutorial_pattern_matching_assignment1_solution.dir/tutorial/pattern_matching/assignment1_solution.cpp.o -o ../bin/demo_tutorial_pattern_matching_assignment1_solution -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 72%] Built target demo_tutorial_pattern_matching_assignment1_solution make -f demos/CMakeFiles/demo_tutorial_pattern_matching_find_approx.dir/build.make demos/CMakeFiles/demo_tutorial_pattern_matching_find_approx.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_pattern_matching_find_approx.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_pattern_matching_find_approx.dir/build.make demos/CMakeFiles/demo_tutorial_pattern_matching_find_approx.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 72%] Building CXX object demos/CMakeFiles/demo_tutorial_pattern_matching_find_approx.dir/tutorial/pattern_matching/find_approx.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_pattern_matching_find_approx.dir/tutorial/pattern_matching/find_approx.cpp.o -MF CMakeFiles/demo_tutorial_pattern_matching_find_approx.dir/tutorial/pattern_matching/find_approx.cpp.o.d -o CMakeFiles/demo_tutorial_pattern_matching_find_approx.dir/tutorial/pattern_matching/find_approx.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/pattern_matching/find_approx.cpp [ 72%] Linking CXX executable ../bin/demo_tutorial_pattern_matching_assignment2_solution cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_pattern_matching_assignment2_solution.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_pattern_matching_assignment2_solution.dir/link.d CMakeFiles/demo_tutorial_pattern_matching_assignment2_solution.dir/tutorial/pattern_matching/assignment2_solution.cpp.o -o ../bin/demo_tutorial_pattern_matching_assignment2_solution -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 72%] Built target demo_tutorial_pattern_matching_assignment2_solution make -f demos/CMakeFiles/demo_tutorial_pattern_matching_find_exact.dir/build.make demos/CMakeFiles/demo_tutorial_pattern_matching_find_exact.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_pattern_matching_find_exact.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_pattern_matching_find_exact.dir/build.make demos/CMakeFiles/demo_tutorial_pattern_matching_find_exact.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 72%] Building CXX object demos/CMakeFiles/demo_tutorial_pattern_matching_find_exact.dir/tutorial/pattern_matching/find_exact.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_pattern_matching_find_exact.dir/tutorial/pattern_matching/find_exact.cpp.o -MF CMakeFiles/demo_tutorial_pattern_matching_find_exact.dir/tutorial/pattern_matching/find_exact.cpp.o.d -o CMakeFiles/demo_tutorial_pattern_matching_find_exact.dir/tutorial/pattern_matching/find_exact.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/pattern_matching/find_exact.cpp [ 72%] Linking CXX executable ../bin/demo_tutorial_pattern_matching_assignment3 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_pattern_matching_assignment3.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_pattern_matching_assignment3.dir/link.d CMakeFiles/demo_tutorial_pattern_matching_assignment3.dir/tutorial/pattern_matching/assignment3.cpp.o -o ../bin/demo_tutorial_pattern_matching_assignment3 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 72%] Built target demo_tutorial_pattern_matching_assignment3 make -f demos/CMakeFiles/demo_tutorial_pattern_matching_find_index.dir/build.make demos/CMakeFiles/demo_tutorial_pattern_matching_find_index.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_pattern_matching_find_index.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_pattern_matching_find_index.dir/build.make demos/CMakeFiles/demo_tutorial_pattern_matching_find_index.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 72%] Building CXX object demos/CMakeFiles/demo_tutorial_pattern_matching_find_index.dir/tutorial/pattern_matching/find_index.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_pattern_matching_find_index.dir/tutorial/pattern_matching/find_index.cpp.o -MF CMakeFiles/demo_tutorial_pattern_matching_find_index.dir/tutorial/pattern_matching/find_index.cpp.o.d -o CMakeFiles/demo_tutorial_pattern_matching_find_index.dir/tutorial/pattern_matching/find_index.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/pattern_matching/find_index.cpp [ 72%] Linking CXX executable ../bin/demo_tutorial_pattern_matching_assignment3_solution cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_pattern_matching_assignment3_solution.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_pattern_matching_assignment3_solution.dir/link.d CMakeFiles/demo_tutorial_pattern_matching_assignment3_solution.dir/tutorial/pattern_matching/assignment3_solution.cpp.o -o ../bin/demo_tutorial_pattern_matching_assignment3_solution -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 72%] Built target demo_tutorial_pattern_matching_assignment3_solution make -f demos/CMakeFiles/demo_tutorial_pattern_matching_find_index_multiple.dir/build.make demos/CMakeFiles/demo_tutorial_pattern_matching_find_index_multiple.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_pattern_matching_find_index_multiple.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_pattern_matching_find_index_multiple.dir/build.make demos/CMakeFiles/demo_tutorial_pattern_matching_find_index_multiple.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 72%] Building CXX object demos/CMakeFiles/demo_tutorial_pattern_matching_find_index_multiple.dir/tutorial/pattern_matching/find_index_multiple.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_pattern_matching_find_index_multiple.dir/tutorial/pattern_matching/find_index_multiple.cpp.o -MF CMakeFiles/demo_tutorial_pattern_matching_find_index_multiple.dir/tutorial/pattern_matching/find_index_multiple.cpp.o.d -o CMakeFiles/demo_tutorial_pattern_matching_find_index_multiple.dir/tutorial/pattern_matching/find_index_multiple.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/pattern_matching/find_index_multiple.cpp [ 72%] Linking CXX executable ../bin/demo_tutorial_pattern_matching_find_approx cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_pattern_matching_find_approx.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. [ 72%] Linking CXX executable ../bin/demo_tutorial_pattern_matching_find_exact cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_pattern_matching_find_exact.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_pattern_matching_find_approx.dir/link.d CMakeFiles/demo_tutorial_pattern_matching_find_approx.dir/tutorial/pattern_matching/find_approx.cpp.o -o ../bin/demo_tutorial_pattern_matching_find_approx -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 72%] Built target demo_tutorial_pattern_matching_find_approx make -f demos/CMakeFiles/demo_tutorial_q_gram_index_index_assignment5.dir/build.make demos/CMakeFiles/demo_tutorial_q_gram_index_index_assignment5.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_q_gram_index_index_assignment5.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_q_gram_index_index_assignment5.dir/build.make demos/CMakeFiles/demo_tutorial_q_gram_index_index_assignment5.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 72%] Building CXX object demos/CMakeFiles/demo_tutorial_q_gram_index_index_assignment5.dir/tutorial/q_gram_index/index_assignment5.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_q_gram_index_index_assignment5.dir/tutorial/q_gram_index/index_assignment5.cpp.o -MF CMakeFiles/demo_tutorial_q_gram_index_index_assignment5.dir/tutorial/q_gram_index/index_assignment5.cpp.o.d -o CMakeFiles/demo_tutorial_q_gram_index_index_assignment5.dir/tutorial/q_gram_index/index_assignment5.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/q_gram_index/index_assignment5.cpp /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_pattern_matching_find_exact.dir/link.d CMakeFiles/demo_tutorial_pattern_matching_find_exact.dir/tutorial/pattern_matching/find_exact.cpp.o -o ../bin/demo_tutorial_pattern_matching_find_exact -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 72%] Built target demo_tutorial_pattern_matching_find_exact make -f demos/CMakeFiles/demo_tutorial_q_gram_index_index_assignment6.dir/build.make demos/CMakeFiles/demo_tutorial_q_gram_index_index_assignment6.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_q_gram_index_index_assignment6.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_q_gram_index_index_assignment6.dir/build.make demos/CMakeFiles/demo_tutorial_q_gram_index_index_assignment6.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 72%] Building CXX object demos/CMakeFiles/demo_tutorial_q_gram_index_index_assignment6.dir/tutorial/q_gram_index/index_assignment6.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_q_gram_index_index_assignment6.dir/tutorial/q_gram_index/index_assignment6.cpp.o -MF CMakeFiles/demo_tutorial_q_gram_index_index_assignment6.dir/tutorial/q_gram_index/index_assignment6.cpp.o.d -o CMakeFiles/demo_tutorial_q_gram_index_index_assignment6.dir/tutorial/q_gram_index/index_assignment6.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/q_gram_index/index_assignment6.cpp [ 72%] Linking CXX executable ../bin/demo_tutorial_parsing_command_line_arguments_example_with_modifyString cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_modifyString.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_modifyString.dir/link.d CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_modifyString.dir/tutorial/parsing_command_line_arguments/example_with_modifyString.cpp.o -o ../bin/demo_tutorial_parsing_command_line_arguments_example_with_modifyString -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 72%] Built target demo_tutorial_parsing_command_line_arguments_example_with_modifyString make -f demos/CMakeFiles/demo_tutorial_q_gram_index_index_qgram.dir/build.make demos/CMakeFiles/demo_tutorial_q_gram_index_index_qgram.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_q_gram_index_index_qgram.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_q_gram_index_index_qgram.dir/build.make demos/CMakeFiles/demo_tutorial_q_gram_index_index_qgram.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 72%] Building CXX object demos/CMakeFiles/demo_tutorial_q_gram_index_index_qgram.dir/tutorial/q_gram_index/index_qgram.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_q_gram_index_index_qgram.dir/tutorial/q_gram_index/index_qgram.cpp.o -MF CMakeFiles/demo_tutorial_q_gram_index_index_qgram.dir/tutorial/q_gram_index/index_qgram.cpp.o.d -o CMakeFiles/demo_tutorial_q_gram_index_index_qgram.dir/tutorial/q_gram_index/index_qgram.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/q_gram_index/index_qgram.cpp [ 72%] Linking CXX executable ../bin/demo_tutorial_q_gram_index_index_assignment5 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_q_gram_index_index_assignment5.dir/link.txt --verbose=1 [ 72%] Linking CXX executable ../bin/demo_tutorial_parsing_command_line_arguments_example_with_own_function cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_own_function.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_q_gram_index_index_assignment5.dir/link.d CMakeFiles/demo_tutorial_q_gram_index_index_assignment5.dir/tutorial/q_gram_index/index_assignment5.cpp.o -o ../bin/demo_tutorial_q_gram_index_index_assignment5 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 72%] Built target demo_tutorial_q_gram_index_index_assignment5 make -f demos/CMakeFiles/demo_tutorial_q_gram_index_index_qgram_hash.dir/build.make demos/CMakeFiles/demo_tutorial_q_gram_index_index_qgram_hash.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_q_gram_index_index_qgram_hash.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_q_gram_index_index_qgram_hash.dir/build.make demos/CMakeFiles/demo_tutorial_q_gram_index_index_qgram_hash.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 72%] Building CXX object demos/CMakeFiles/demo_tutorial_q_gram_index_index_qgram_hash.dir/tutorial/q_gram_index/index_qgram_hash.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_q_gram_index_index_qgram_hash.dir/tutorial/q_gram_index/index_qgram_hash.cpp.o -MF CMakeFiles/demo_tutorial_q_gram_index_index_qgram_hash.dir/tutorial/q_gram_index/index_qgram_hash.cpp.o.d -o CMakeFiles/demo_tutorial_q_gram_index_index_qgram_hash.dir/tutorial/q_gram_index/index_qgram_hash.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/q_gram_index/index_qgram_hash.cpp /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_own_function.dir/link.d CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_own_function.dir/tutorial/parsing_command_line_arguments/example_with_own_function.cpp.o -o ../bin/demo_tutorial_parsing_command_line_arguments_example_with_own_function -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 72%] Built target demo_tutorial_parsing_command_line_arguments_example_with_own_function make -f demos/CMakeFiles/demo_tutorial_realignment_step1.dir/build.make demos/CMakeFiles/demo_tutorial_realignment_step1.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_realignment_step1.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_realignment_step1.dir/build.make demos/CMakeFiles/demo_tutorial_realignment_step1.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 72%] Building CXX object demos/CMakeFiles/demo_tutorial_realignment_step1.dir/tutorial/realignment/step1.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_realignment_step1.dir/tutorial/realignment/step1.cpp.o -MF CMakeFiles/demo_tutorial_realignment_step1.dir/tutorial/realignment/step1.cpp.o.d -o CMakeFiles/demo_tutorial_realignment_step1.dir/tutorial/realignment/step1.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/realignment/step1.cpp [ 72%] Linking CXX executable ../bin/demo_tutorial_pattern_matching_find_index cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_pattern_matching_find_index.dir/link.txt --verbose=1 [ 72%] Linking CXX executable ../bin/demo_tutorial_q_gram_index_index_qgram cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_q_gram_index_index_qgram.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_q_gram_index_index_qgram.dir/link.d CMakeFiles/demo_tutorial_q_gram_index_index_qgram.dir/tutorial/q_gram_index/index_qgram.cpp.o -o ../bin/demo_tutorial_q_gram_index_index_qgram -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 72%] Built target demo_tutorial_q_gram_index_index_qgram make -f demos/CMakeFiles/demo_tutorial_realignment_step2.dir/build.make demos/CMakeFiles/demo_tutorial_realignment_step2.dir/depend /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_pattern_matching_find_index.dir/link.d CMakeFiles/demo_tutorial_pattern_matching_find_index.dir/tutorial/pattern_matching/find_index.cpp.o -o ../bin/demo_tutorial_pattern_matching_find_index -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_realignment_step2.dir/DependInfo.cmake "--color=" [ 72%] Built target demo_tutorial_pattern_matching_find_index make -f demos/CMakeFiles/demo_tutorial_sam_and_bam_io_base.dir/build.make demos/CMakeFiles/demo_tutorial_sam_and_bam_io_base.dir/depend make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_sam_and_bam_io_base.dir/DependInfo.cmake "--color=" make -f demos/CMakeFiles/demo_tutorial_realignment_step2.dir/build.make demos/CMakeFiles/demo_tutorial_realignment_step2.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 72%] Building CXX object demos/CMakeFiles/demo_tutorial_realignment_step2.dir/tutorial/realignment/step2.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_realignment_step2.dir/tutorial/realignment/step2.cpp.o -MF CMakeFiles/demo_tutorial_realignment_step2.dir/tutorial/realignment/step2.cpp.o.d -o CMakeFiles/demo_tutorial_realignment_step2.dir/tutorial/realignment/step2.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/realignment/step2.cpp make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_sam_and_bam_io_base.dir/build.make demos/CMakeFiles/demo_tutorial_sam_and_bam_io_base.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 72%] Building CXX object demos/CMakeFiles/demo_tutorial_sam_and_bam_io_base.dir/tutorial/sam_and_bam_io/base.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_sam_and_bam_io_base.dir/tutorial/sam_and_bam_io/base.cpp.o -MF CMakeFiles/demo_tutorial_sam_and_bam_io_base.dir/tutorial/sam_and_bam_io/base.cpp.o.d -o 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The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_struct.dir/link.d CMakeFiles/demo_tutorial_parsing_command_line_arguments_example_with_struct.dir/tutorial/parsing_command_line_arguments/example_with_struct.cpp.o -o ../bin/demo_tutorial_parsing_command_line_arguments_example_with_struct -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 72%] Built target demo_tutorial_parsing_command_line_arguments_example_with_struct make -f demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example1.dir/build.make demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example1.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example1.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example1.dir/build.make demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example1.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 72%] Building CXX object demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example1.dir/tutorial/sam_and_bam_io/example1.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example1.dir/tutorial/sam_and_bam_io/example1.cpp.o -MF CMakeFiles/demo_tutorial_sam_and_bam_io_example1.dir/tutorial/sam_and_bam_io/example1.cpp.o.d -o CMakeFiles/demo_tutorial_sam_and_bam_io_example1.dir/tutorial/sam_and_bam_io/example1.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/sam_and_bam_io/example1.cpp [ 72%] Linking CXX executable ../bin/demo_tutorial_q_gram_index_index_assignment6 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_q_gram_index_index_assignment6.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_q_gram_index_index_assignment6.dir/link.d CMakeFiles/demo_tutorial_q_gram_index_index_assignment6.dir/tutorial/q_gram_index/index_assignment6.cpp.o -o ../bin/demo_tutorial_q_gram_index_index_assignment6 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 72%] Built target demo_tutorial_q_gram_index_index_assignment6 make -f demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example2.dir/build.make demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example2.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example2.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example2.dir/build.make demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example2.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 72%] Building CXX object demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example2.dir/tutorial/sam_and_bam_io/example2.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example2.dir/tutorial/sam_and_bam_io/example2.cpp.o -MF CMakeFiles/demo_tutorial_sam_and_bam_io_example2.dir/tutorial/sam_and_bam_io/example2.cpp.o.d -o CMakeFiles/demo_tutorial_sam_and_bam_io_example2.dir/tutorial/sam_and_bam_io/example2.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/sam_and_bam_io/example2.cpp [ 72%] Linking CXX executable ../bin/demo_tutorial_parsing_command_line_arguments_final_solution cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_parsing_command_line_arguments_final_solution.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_parsing_command_line_arguments_final_solution.dir/link.d CMakeFiles/demo_tutorial_parsing_command_line_arguments_final_solution.dir/tutorial/parsing_command_line_arguments/final_solution.cpp.o -o ../bin/demo_tutorial_parsing_command_line_arguments_final_solution -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 72%] Built target demo_tutorial_parsing_command_line_arguments_final_solution make -f demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example7.dir/build.make demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example7.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example7.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example7.dir/build.make demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example7.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 72%] Building CXX object demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example7.dir/tutorial/sam_and_bam_io/example7.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_sam_and_bam_io_example7.dir/tutorial/sam_and_bam_io/example7.cpp.o -MF CMakeFiles/demo_tutorial_sam_and_bam_io_example7.dir/tutorial/sam_and_bam_io/example7.cpp.o.d -o CMakeFiles/demo_tutorial_sam_and_bam_io_example7.dir/tutorial/sam_and_bam_io/example7.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/sam_and_bam_io/example7.cpp [ 72%] Linking CXX executable ../bin/demo_tutorial_q_gram_index_index_qgram_hash cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_q_gram_index_index_qgram_hash.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_q_gram_index_index_qgram_hash.dir/link.d CMakeFiles/demo_tutorial_q_gram_index_index_qgram_hash.dir/tutorial/q_gram_index/index_qgram_hash.cpp.o -o ../bin/demo_tutorial_q_gram_index_index_qgram_hash -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 72%] Built target demo_tutorial_q_gram_index_index_qgram_hash make -f demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution1.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution1.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution1.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 72%] Building CXX object demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution1.dir/tutorial/sam_and_bam_io/solution1.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution1.dir/tutorial/sam_and_bam_io/solution1.cpp.o -MF CMakeFiles/demo_tutorial_sam_and_bam_io_solution1.dir/tutorial/sam_and_bam_io/solution1.cpp.o.d -o CMakeFiles/demo_tutorial_sam_and_bam_io_solution1.dir/tutorial/sam_and_bam_io/solution1.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/sam_and_bam_io/solution1.cpp [ 72%] Linking CXX executable ../bin/demo_tutorial_sam_and_bam_io_base cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sam_and_bam_io_base.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_sam_and_bam_io_base.dir/link.d CMakeFiles/demo_tutorial_sam_and_bam_io_base.dir/tutorial/sam_and_bam_io/base.cpp.o -o ../bin/demo_tutorial_sam_and_bam_io_base -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 72%] Built target demo_tutorial_sam_and_bam_io_base make -f demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution2.dir/build.make demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution2.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution2.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution2.dir/build.make demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution2.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 72%] Building CXX object demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution2.dir/tutorial/sam_and_bam_io/solution2.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution2.dir/tutorial/sam_and_bam_io/solution2.cpp.o -MF CMakeFiles/demo_tutorial_sam_and_bam_io_solution2.dir/tutorial/sam_and_bam_io/solution2.cpp.o.d -o CMakeFiles/demo_tutorial_sam_and_bam_io_solution2.dir/tutorial/sam_and_bam_io/solution2.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/sam_and_bam_io/solution2.cpp [ 72%] Linking CXX executable ../bin/demo_tutorial_sam_and_bam_io_example2 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sam_and_bam_io_example2.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_sam_and_bam_io_example2.dir/link.d CMakeFiles/demo_tutorial_sam_and_bam_io_example2.dir/tutorial/sam_and_bam_io/example2.cpp.o -o ../bin/demo_tutorial_sam_and_bam_io_example2 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 72%] Built target demo_tutorial_sam_and_bam_io_example2 make -f demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution3.dir/build.make demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution3.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution3.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution3.dir/build.make demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution3.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 72%] Building CXX object demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution3.dir/tutorial/sam_and_bam_io/solution3.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_sam_and_bam_io_solution3.dir/tutorial/sam_and_bam_io/solution3.cpp.o -MF CMakeFiles/demo_tutorial_sam_and_bam_io_solution3.dir/tutorial/sam_and_bam_io/solution3.cpp.o.d -o CMakeFiles/demo_tutorial_sam_and_bam_io_solution3.dir/tutorial/sam_and_bam_io/solution3.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/sam_and_bam_io/solution3.cpp [ 73%] Linking CXX executable ../bin/demo_tutorial_sam_and_bam_io_solution2 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sam_and_bam_io_solution2.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_sam_and_bam_io_solution2.dir/link.d CMakeFiles/demo_tutorial_sam_and_bam_io_solution2.dir/tutorial/sam_and_bam_io/solution2.cpp.o -o ../bin/demo_tutorial_sam_and_bam_io_solution2 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 73%] Built target demo_tutorial_sam_and_bam_io_solution2 make -f demos/CMakeFiles/demo_tutorial_seed_and_extend_example1.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_example1.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_seed_and_extend_example1.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_seed_and_extend_example1.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_example1.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 73%] Building CXX object demos/CMakeFiles/demo_tutorial_seed_and_extend_example1.dir/tutorial/seed_and_extend/example1.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_seed_and_extend_example1.dir/tutorial/seed_and_extend/example1.cpp.o -MF CMakeFiles/demo_tutorial_seed_and_extend_example1.dir/tutorial/seed_and_extend/example1.cpp.o.d -o CMakeFiles/demo_tutorial_seed_and_extend_example1.dir/tutorial/seed_and_extend/example1.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/seed_and_extend/example1.cpp [ 73%] Linking CXX executable ../bin/demo_tutorial_sam_and_bam_io_example1 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sam_and_bam_io_example1.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_sam_and_bam_io_example1.dir/link.d CMakeFiles/demo_tutorial_sam_and_bam_io_example1.dir/tutorial/sam_and_bam_io/example1.cpp.o -o ../bin/demo_tutorial_sam_and_bam_io_example1 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 73%] Built target demo_tutorial_sam_and_bam_io_example1 make -f demos/CMakeFiles/demo_tutorial_seed_and_extend_example2.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_example2.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_seed_and_extend_example2.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_seed_and_extend_example2.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_example2.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 73%] Building CXX object demos/CMakeFiles/demo_tutorial_seed_and_extend_example2.dir/tutorial/seed_and_extend/example2.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_seed_and_extend_example2.dir/tutorial/seed_and_extend/example2.cpp.o -MF CMakeFiles/demo_tutorial_seed_and_extend_example2.dir/tutorial/seed_and_extend/example2.cpp.o.d -o CMakeFiles/demo_tutorial_seed_and_extend_example2.dir/tutorial/seed_and_extend/example2.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/seed_and_extend/example2.cpp [ 73%] Linking CXX executable ../bin/demo_tutorial_sam_and_bam_io_example7 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sam_and_bam_io_example7.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_sam_and_bam_io_example7.dir/link.d CMakeFiles/demo_tutorial_sam_and_bam_io_example7.dir/tutorial/sam_and_bam_io/example7.cpp.o -o ../bin/demo_tutorial_sam_and_bam_io_example7 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 73%] Built target demo_tutorial_sam_and_bam_io_example7 make -f demos/CMakeFiles/demo_tutorial_seed_and_extend_example3.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_example3.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_seed_and_extend_example3.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_seed_and_extend_example3.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_example3.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 73%] Building CXX object demos/CMakeFiles/demo_tutorial_seed_and_extend_example3.dir/tutorial/seed_and_extend/example3.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_seed_and_extend_example3.dir/tutorial/seed_and_extend/example3.cpp.o -MF CMakeFiles/demo_tutorial_seed_and_extend_example3.dir/tutorial/seed_and_extend/example3.cpp.o.d -o CMakeFiles/demo_tutorial_seed_and_extend_example3.dir/tutorial/seed_and_extend/example3.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/seed_and_extend/example3.cpp [ 73%] Linking CXX executable ../bin/demo_tutorial_sam_and_bam_io_solution1 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sam_and_bam_io_solution1.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_sam_and_bam_io_solution1.dir/link.d CMakeFiles/demo_tutorial_sam_and_bam_io_solution1.dir/tutorial/sam_and_bam_io/solution1.cpp.o -o ../bin/demo_tutorial_sam_and_bam_io_solution1 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 73%] Built target demo_tutorial_sam_and_bam_io_solution1 make -f demos/CMakeFiles/demo_tutorial_seed_and_extend_example4.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_example4.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_seed_and_extend_example4.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_seed_and_extend_example4.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_example4.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 73%] Building CXX object demos/CMakeFiles/demo_tutorial_seed_and_extend_example4.dir/tutorial/seed_and_extend/example4.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_seed_and_extend_example4.dir/tutorial/seed_and_extend/example4.cpp.o -MF CMakeFiles/demo_tutorial_seed_and_extend_example4.dir/tutorial/seed_and_extend/example4.cpp.o.d -o CMakeFiles/demo_tutorial_seed_and_extend_example4.dir/tutorial/seed_and_extend/example4.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/seed_and_extend/example4.cpp [ 73%] Linking CXX executable ../bin/demo_tutorial_seed_and_extend_example1 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_seed_and_extend_example1.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. [ 73%] Linking CXX executable ../bin/demo_tutorial_seed_and_extend_example2 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_seed_and_extend_example2.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_seed_and_extend_example1.dir/link.d CMakeFiles/demo_tutorial_seed_and_extend_example1.dir/tutorial/seed_and_extend/example1.cpp.o -o ../bin/demo_tutorial_seed_and_extend_example1 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. [ 73%] Built target demo_tutorial_seed_and_extend_example1 make -f demos/CMakeFiles/demo_tutorial_seed_and_extend_example5.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_example5.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_seed_and_extend_example5.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_seed_and_extend_example5.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_example5.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_seed_and_extend_example2.dir/link.d CMakeFiles/demo_tutorial_seed_and_extend_example2.dir/tutorial/seed_and_extend/example2.cpp.o -o ../bin/demo_tutorial_seed_and_extend_example2 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 73%] Building CXX object demos/CMakeFiles/demo_tutorial_seed_and_extend_example5.dir/tutorial/seed_and_extend/example5.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_seed_and_extend_example5.dir/tutorial/seed_and_extend/example5.cpp.o -MF CMakeFiles/demo_tutorial_seed_and_extend_example5.dir/tutorial/seed_and_extend/example5.cpp.o.d -o CMakeFiles/demo_tutorial_seed_and_extend_example5.dir/tutorial/seed_and_extend/example5.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/seed_and_extend/example5.cpp [ 73%] Built target demo_tutorial_seed_and_extend_example2 make -f demos/CMakeFiles/demo_tutorial_seed_and_extend_example6.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_example6.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_seed_and_extend_example6.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_seed_and_extend_example6.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_example6.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 74%] Building CXX object demos/CMakeFiles/demo_tutorial_seed_and_extend_example6.dir/tutorial/seed_and_extend/example6.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_seed_and_extend_example6.dir/tutorial/seed_and_extend/example6.cpp.o -MF CMakeFiles/demo_tutorial_seed_and_extend_example6.dir/tutorial/seed_and_extend/example6.cpp.o.d -o CMakeFiles/demo_tutorial_seed_and_extend_example6.dir/tutorial/seed_and_extend/example6.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/seed_and_extend/example6.cpp [ 74%] Linking CXX executable ../bin/demo_tutorial_seed_and_extend_example4 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_seed_and_extend_example4.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_seed_and_extend_example4.dir/link.d CMakeFiles/demo_tutorial_seed_and_extend_example4.dir/tutorial/seed_and_extend/example4.cpp.o -o ../bin/demo_tutorial_seed_and_extend_example4 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 74%] Built target demo_tutorial_seed_and_extend_example4 make -f demos/CMakeFiles/demo_tutorial_seed_and_extend_example7.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_example7.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_seed_and_extend_example7.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_seed_and_extend_example7.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_example7.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 74%] Building CXX object demos/CMakeFiles/demo_tutorial_seed_and_extend_example7.dir/tutorial/seed_and_extend/example7.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_seed_and_extend_example7.dir/tutorial/seed_and_extend/example7.cpp.o -MF CMakeFiles/demo_tutorial_seed_and_extend_example7.dir/tutorial/seed_and_extend/example7.cpp.o.d -o CMakeFiles/demo_tutorial_seed_and_extend_example7.dir/tutorial/seed_and_extend/example7.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/seed_and_extend/example7.cpp [ 74%] Linking CXX executable ../bin/demo_tutorial_seed_and_extend_example5 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_seed_and_extend_example5.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_seed_and_extend_example5.dir/link.d CMakeFiles/demo_tutorial_seed_and_extend_example5.dir/tutorial/seed_and_extend/example5.cpp.o -o ../bin/demo_tutorial_seed_and_extend_example5 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 74%] Built target demo_tutorial_seed_and_extend_example5 make -f demos/CMakeFiles/demo_tutorial_seed_and_extend_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_solution1.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_seed_and_extend_solution1.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_seed_and_extend_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_solution1.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 74%] Building CXX object demos/CMakeFiles/demo_tutorial_seed_and_extend_solution1.dir/tutorial/seed_and_extend/solution1.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_seed_and_extend_solution1.dir/tutorial/seed_and_extend/solution1.cpp.o -MF CMakeFiles/demo_tutorial_seed_and_extend_solution1.dir/tutorial/seed_and_extend/solution1.cpp.o.d -o CMakeFiles/demo_tutorial_seed_and_extend_solution1.dir/tutorial/seed_and_extend/solution1.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/seed_and_extend/solution1.cpp [ 74%] Linking CXX executable ../bin/demo_tutorial_sam_and_bam_io_solution3 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sam_and_bam_io_solution3.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. [ 74%] Linking CXX executable ../bin/demo_tutorial_seed_and_extend_example6 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_seed_and_extend_example6.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_sam_and_bam_io_solution3.dir/link.d CMakeFiles/demo_tutorial_sam_and_bam_io_solution3.dir/tutorial/sam_and_bam_io/solution3.cpp.o -o ../bin/demo_tutorial_sam_and_bam_io_solution3 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 74%] Built target demo_tutorial_sam_and_bam_io_solution3 make -f demos/CMakeFiles/demo_tutorial_seed_and_extend_solution2.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_solution2.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_seed_and_extend_solution2.dir/DependInfo.cmake "--color=" [ 75%] Linking CXX executable ../bin/demo_tutorial_pattern_matching_find_index_multiple cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_pattern_matching_find_index_multiple.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_seed_and_extend_solution2.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_solution2.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. [ 75%] Building CXX object demos/CMakeFiles/demo_tutorial_seed_and_extend_solution2.dir/tutorial/seed_and_extend/solution2.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_seed_and_extend_solution2.dir/tutorial/seed_and_extend/solution2.cpp.o -MF CMakeFiles/demo_tutorial_seed_and_extend_solution2.dir/tutorial/seed_and_extend/solution2.cpp.o.d -o CMakeFiles/demo_tutorial_seed_and_extend_solution2.dir/tutorial/seed_and_extend/solution2.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/seed_and_extend/solution2.cpp /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_seed_and_extend_example6.dir/link.d CMakeFiles/demo_tutorial_seed_and_extend_example6.dir/tutorial/seed_and_extend/example6.cpp.o -o ../bin/demo_tutorial_seed_and_extend_example6 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. [ 75%] Built target demo_tutorial_seed_and_extend_example6 make -f demos/CMakeFiles/demo_tutorial_seed_and_extend_solution3.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_solution3.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_seed_and_extend_solution3.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_seed_and_extend_solution3.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_solution3.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 75%] Building CXX object demos/CMakeFiles/demo_tutorial_seed_and_extend_solution3.dir/tutorial/seed_and_extend/solution3.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_seed_and_extend_solution3.dir/tutorial/seed_and_extend/solution3.cpp.o -MF CMakeFiles/demo_tutorial_seed_and_extend_solution3.dir/tutorial/seed_and_extend/solution3.cpp.o.d -o CMakeFiles/demo_tutorial_seed_and_extend_solution3.dir/tutorial/seed_and_extend/solution3.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/seed_and_extend/solution3.cpp /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_pattern_matching_find_index_multiple.dir/link.d CMakeFiles/demo_tutorial_pattern_matching_find_index_multiple.dir/tutorial/pattern_matching/find_index_multiple.cpp.o -o ../bin/demo_tutorial_pattern_matching_find_index_multiple -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 75%] Built target demo_tutorial_pattern_matching_find_index_multiple make -f demos/CMakeFiles/demo_tutorial_seed_and_extend_solution4.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_solution4.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_seed_and_extend_solution4.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_seed_and_extend_solution4.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_solution4.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 75%] Building CXX object demos/CMakeFiles/demo_tutorial_seed_and_extend_solution4.dir/tutorial/seed_and_extend/solution4.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_seed_and_extend_solution4.dir/tutorial/seed_and_extend/solution4.cpp.o -MF CMakeFiles/demo_tutorial_seed_and_extend_solution4.dir/tutorial/seed_and_extend/solution4.cpp.o.d -o CMakeFiles/demo_tutorial_seed_and_extend_solution4.dir/tutorial/seed_and_extend/solution4.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/seed_and_extend/solution4.cpp [ 75%] Linking CXX executable ../bin/demo_tutorial_realignment_step1 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_realignment_step1.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. [ 75%] Linking CXX executable ../bin/demo_tutorial_seed_and_extend_example3 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_seed_and_extend_example3.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_realignment_step1.dir/link.d CMakeFiles/demo_tutorial_realignment_step1.dir/tutorial/realignment/step1.cpp.o -o ../bin/demo_tutorial_realignment_step1 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 75%] Built target demo_tutorial_realignment_step1 make -f demos/CMakeFiles/demo_tutorial_seed_and_extend_solution5.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_solution5.dir/depend /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_seed_and_extend_example3.dir/link.d CMakeFiles/demo_tutorial_seed_and_extend_example3.dir/tutorial/seed_and_extend/example3.cpp.o -o ../bin/demo_tutorial_seed_and_extend_example3 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 75%] Built target demo_tutorial_seed_and_extend_example3 make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_seed_and_extend_solution5.dir/DependInfo.cmake "--color=" make -f demos/CMakeFiles/demo_tutorial_seed_and_extend_solution6.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_solution6.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_seed_and_extend_solution6.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_seed_and_extend_solution6.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_solution6.dir/build make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_seed_and_extend_solution5.dir/build.make demos/CMakeFiles/demo_tutorial_seed_and_extend_solution5.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 75%] Building CXX object demos/CMakeFiles/demo_tutorial_seed_and_extend_solution6.dir/tutorial/seed_and_extend/solution6.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_seed_and_extend_solution6.dir/tutorial/seed_and_extend/solution6.cpp.o -MF CMakeFiles/demo_tutorial_seed_and_extend_solution6.dir/tutorial/seed_and_extend/solution6.cpp.o.d -o CMakeFiles/demo_tutorial_seed_and_extend_solution6.dir/tutorial/seed_and_extend/solution6.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/seed_and_extend/solution6.cpp [ 76%] Building CXX object demos/CMakeFiles/demo_tutorial_seed_and_extend_solution5.dir/tutorial/seed_and_extend/solution5.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_seed_and_extend_solution5.dir/tutorial/seed_and_extend/solution5.cpp.o -MF CMakeFiles/demo_tutorial_seed_and_extend_solution5.dir/tutorial/seed_and_extend/solution5.cpp.o.d -o CMakeFiles/demo_tutorial_seed_and_extend_solution5.dir/tutorial/seed_and_extend/solution5.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/seed_and_extend/solution5.cpp [ 76%] Linking CXX executable ../bin/demo_tutorial_seed_and_extend_solution1 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_seed_and_extend_solution1.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_seed_and_extend_solution1.dir/link.d CMakeFiles/demo_tutorial_seed_and_extend_solution1.dir/tutorial/seed_and_extend/solution1.cpp.o -o ../bin/demo_tutorial_seed_and_extend_solution1 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 76%] Built target demo_tutorial_seed_and_extend_solution1 make -f demos/CMakeFiles/demo_tutorial_seeds_example1.dir/build.make demos/CMakeFiles/demo_tutorial_seeds_example1.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_seeds_example1.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_seeds_example1.dir/build.make demos/CMakeFiles/demo_tutorial_seeds_example1.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 76%] Building CXX object demos/CMakeFiles/demo_tutorial_seeds_example1.dir/tutorial/seeds/example1.cpp.o [ 76%] Linking CXX executable ../bin/demo_tutorial_seed_and_extend_solution4 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_seeds_example1.dir/tutorial/seeds/example1.cpp.o -MF CMakeFiles/demo_tutorial_seeds_example1.dir/tutorial/seeds/example1.cpp.o.d -o CMakeFiles/demo_tutorial_seeds_example1.dir/tutorial/seeds/example1.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/seeds/example1.cpp cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_seed_and_extend_solution4.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_seed_and_extend_solution4.dir/link.d CMakeFiles/demo_tutorial_seed_and_extend_solution4.dir/tutorial/seed_and_extend/solution4.cpp.o -o ../bin/demo_tutorial_seed_and_extend_solution4 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 76%] Built target demo_tutorial_seed_and_extend_solution4 make -f demos/CMakeFiles/demo_tutorial_seeds_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_seeds_solution1.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_seeds_solution1.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_seeds_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_seeds_solution1.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 76%] Building CXX object demos/CMakeFiles/demo_tutorial_seeds_solution1.dir/tutorial/seeds/solution1.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_seeds_solution1.dir/tutorial/seeds/solution1.cpp.o -MF CMakeFiles/demo_tutorial_seeds_solution1.dir/tutorial/seeds/solution1.cpp.o.d -o CMakeFiles/demo_tutorial_seeds_solution1.dir/tutorial/seeds/solution1.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/seeds/solution1.cpp [ 76%] Linking CXX executable ../bin/demo_tutorial_seed_and_extend_solution2 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_seed_and_extend_solution2.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_seed_and_extend_solution2.dir/link.d CMakeFiles/demo_tutorial_seed_and_extend_solution2.dir/tutorial/seed_and_extend/solution2.cpp.o -o ../bin/demo_tutorial_seed_and_extend_solution2 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 76%] Built target demo_tutorial_seed_and_extend_solution2 make -f demos/CMakeFiles/demo_tutorial_sequence_io_base.dir/build.make demos/CMakeFiles/demo_tutorial_sequence_io_base.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequence_io_base.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_sequence_io_base.dir/build.make demos/CMakeFiles/demo_tutorial_sequence_io_base.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 76%] Building CXX object demos/CMakeFiles/demo_tutorial_sequence_io_base.dir/tutorial/sequence_io/base.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_sequence_io_base.dir/tutorial/sequence_io/base.cpp.o -MF CMakeFiles/demo_tutorial_sequence_io_base.dir/tutorial/sequence_io/base.cpp.o.d -o CMakeFiles/demo_tutorial_sequence_io_base.dir/tutorial/sequence_io/base.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequence_io/base.cpp [ 76%] Linking CXX executable ../bin/demo_tutorial_seeds_example1 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_seeds_example1.dir/link.txt --verbose=1 [ 76%] Linking CXX executable ../bin/demo_tutorial_seed_and_extend_solution5 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_seed_and_extend_solution5.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_seeds_example1.dir/link.d CMakeFiles/demo_tutorial_seeds_example1.dir/tutorial/seeds/example1.cpp.o -o ../bin/demo_tutorial_seeds_example1 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 76%] Built target demo_tutorial_seeds_example1 make -f demos/CMakeFiles/demo_tutorial_sequence_io_example1.dir/build.make demos/CMakeFiles/demo_tutorial_sequence_io_example1.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' /usr/lib/aarch64-linux-gnu/libbz2.socd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequence_io_example1.dir/DependInfo.cmake "--color=" : warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_sequence_io_example1.dir/build.make demos/CMakeFiles/demo_tutorial_sequence_io_example1.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_seed_and_extend_solution5.dir/link.d CMakeFiles/demo_tutorial_seed_and_extend_solution5.dir/tutorial/seed_and_extend/solution5.cpp.o -o ../bin/demo_tutorial_seed_and_extend_solution5 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a [ 76%] Building CXX object demos/CMakeFiles/demo_tutorial_sequence_io_example1.dir/tutorial/sequence_io/example1.cpp.o make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_sequence_io_example1.dir/tutorial/sequence_io/example1.cpp.o -MF CMakeFiles/demo_tutorial_sequence_io_example1.dir/tutorial/sequence_io/example1.cpp.o.d -o CMakeFiles/demo_tutorial_sequence_io_example1.dir/tutorial/sequence_io/example1.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequence_io/example1.cpp [ 76%] Built target demo_tutorial_seed_and_extend_solution5 make -f demos/CMakeFiles/demo_tutorial_sequence_io_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_sequence_io_solution1.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequence_io_solution1.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_sequence_io_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_sequence_io_solution1.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 77%] Building CXX object demos/CMakeFiles/demo_tutorial_sequence_io_solution1.dir/tutorial/sequence_io/solution1.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_sequence_io_solution1.dir/tutorial/sequence_io/solution1.cpp.o -MF CMakeFiles/demo_tutorial_sequence_io_solution1.dir/tutorial/sequence_io/solution1.cpp.o.d -o CMakeFiles/demo_tutorial_sequence_io_solution1.dir/tutorial/sequence_io/solution1.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequence_io/solution1.cpp [ 77%] Linking CXX executable ../bin/demo_tutorial_seeds_solution1 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_seeds_solution1.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_seeds_solution1.dir/link.d CMakeFiles/demo_tutorial_seeds_solution1.dir/tutorial/seeds/solution1.cpp.o -o ../bin/demo_tutorial_seeds_solution1 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 77%] Built target demo_tutorial_seeds_solution1 make -f demos/CMakeFiles/demo_tutorial_sequence_io_solution2.dir/build.make demos/CMakeFiles/demo_tutorial_sequence_io_solution2.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequence_io_solution2.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_sequence_io_solution2.dir/build.make demos/CMakeFiles/demo_tutorial_sequence_io_solution2.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 77%] Building CXX object demos/CMakeFiles/demo_tutorial_sequence_io_solution2.dir/tutorial/sequence_io/solution2.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_sequence_io_solution2.dir/tutorial/sequence_io/solution2.cpp.o -MF CMakeFiles/demo_tutorial_sequence_io_solution2.dir/tutorial/sequence_io/solution2.cpp.o.d -o CMakeFiles/demo_tutorial_sequence_io_solution2.dir/tutorial/sequence_io/solution2.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequence_io/solution2.cpp [ 77%] Linking CXX executable ../bin/demo_tutorial_seed_and_extend_solution3 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_seed_and_extend_solution3.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_seed_and_extend_solution3.dir/link.d CMakeFiles/demo_tutorial_seed_and_extend_solution3.dir/tutorial/seed_and_extend/solution3.cpp.o -o ../bin/demo_tutorial_seed_and_extend_solution3 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 77%] Built target demo_tutorial_seed_and_extend_solution3 make -f demos/CMakeFiles/demo_tutorial_sequence_io_solution3.dir/build.make demos/CMakeFiles/demo_tutorial_sequence_io_solution3.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequence_io_solution3.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_sequence_io_solution3.dir/build.make demos/CMakeFiles/demo_tutorial_sequence_io_solution3.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 77%] Building CXX object demos/CMakeFiles/demo_tutorial_sequence_io_solution3.dir/tutorial/sequence_io/solution3.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_sequence_io_solution3.dir/tutorial/sequence_io/solution3.cpp.o -MF CMakeFiles/demo_tutorial_sequence_io_solution3.dir/tutorial/sequence_io/solution3.cpp.o.d -o CMakeFiles/demo_tutorial_sequence_io_solution3.dir/tutorial/sequence_io/solution3.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequence_io/solution3.cpp [ 78%] Linking CXX executable ../bin/demo_tutorial_realignment_step2 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_realignment_step2.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_realignment_step2.dir/link.d CMakeFiles/demo_tutorial_realignment_step2.dir/tutorial/realignment/step2.cpp.o -o ../bin/demo_tutorial_realignment_step2 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 78%] Built target demo_tutorial_realignment_step2 make -f demos/CMakeFiles/demo_tutorial_sequence_io_solution4.dir/build.make demos/CMakeFiles/demo_tutorial_sequence_io_solution4.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequence_io_solution4.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_sequence_io_solution4.dir/build.make demos/CMakeFiles/demo_tutorial_sequence_io_solution4.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 78%] Building CXX object demos/CMakeFiles/demo_tutorial_sequence_io_solution4.dir/tutorial/sequence_io/solution4.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_sequence_io_solution4.dir/tutorial/sequence_io/solution4.cpp.o -MF CMakeFiles/demo_tutorial_sequence_io_solution4.dir/tutorial/sequence_io/solution4.cpp.o.d -o CMakeFiles/demo_tutorial_sequence_io_solution4.dir/tutorial/sequence_io/solution4.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequence_io/solution4.cpp [ 78%] Linking CXX executable ../bin/demo_tutorial_sequence_io_base cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sequence_io_base.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_sequence_io_base.dir/link.d CMakeFiles/demo_tutorial_sequence_io_base.dir/tutorial/sequence_io/base.cpp.o -o ../bin/demo_tutorial_sequence_io_base -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 78%] Built target demo_tutorial_sequence_io_base make -f demos/CMakeFiles/demo_tutorial_sequences_assignment_1_solution.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_assignment_1_solution.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_assignment_1_solution.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_sequences_assignment_1_solution.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_assignment_1_solution.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 78%] Building CXX object demos/CMakeFiles/demo_tutorial_sequences_assignment_1_solution.dir/tutorial/sequences/assignment_1_solution.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_sequences_assignment_1_solution.dir/tutorial/sequences/assignment_1_solution.cpp.o -MF CMakeFiles/demo_tutorial_sequences_assignment_1_solution.dir/tutorial/sequences/assignment_1_solution.cpp.o.d -o CMakeFiles/demo_tutorial_sequences_assignment_1_solution.dir/tutorial/sequences/assignment_1_solution.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequences/assignment_1_solution.cpp [ 78%] Linking CXX executable ../bin/demo_tutorial_sequence_io_solution1 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sequence_io_solution1.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_sequence_io_solution1.dir/link.d CMakeFiles/demo_tutorial_sequence_io_solution1.dir/tutorial/sequence_io/solution1.cpp.o -o ../bin/demo_tutorial_sequence_io_solution1 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 78%] Built target demo_tutorial_sequence_io_solution1 make -f demos/CMakeFiles/demo_tutorial_sequences_assignment_2_solution.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_assignment_2_solution.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_assignment_2_solution.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_sequences_assignment_2_solution.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_assignment_2_solution.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 78%] Building CXX object demos/CMakeFiles/demo_tutorial_sequences_assignment_2_solution.dir/tutorial/sequences/assignment_2_solution.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_sequences_assignment_2_solution.dir/tutorial/sequences/assignment_2_solution.cpp.o -MF CMakeFiles/demo_tutorial_sequences_assignment_2_solution.dir/tutorial/sequences/assignment_2_solution.cpp.o.d -o CMakeFiles/demo_tutorial_sequences_assignment_2_solution.dir/tutorial/sequences/assignment_2_solution.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequences/assignment_2_solution.cpp [ 78%] Linking CXX executable ../bin/demo_tutorial_sequence_io_example1 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sequence_io_example1.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_sequence_io_example1.dir/link.d CMakeFiles/demo_tutorial_sequence_io_example1.dir/tutorial/sequence_io/example1.cpp.o -o ../bin/demo_tutorial_sequence_io_example1 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 78%] Built target demo_tutorial_sequence_io_example1 make -f demos/CMakeFiles/demo_tutorial_sequences_assignment_3.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_assignment_3.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_assignment_3.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_sequences_assignment_3.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_assignment_3.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 79%] Building CXX object demos/CMakeFiles/demo_tutorial_sequences_assignment_3.dir/tutorial/sequences/assignment_3.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_sequences_assignment_3.dir/tutorial/sequences/assignment_3.cpp.o -MF CMakeFiles/demo_tutorial_sequences_assignment_3.dir/tutorial/sequences/assignment_3.cpp.o.d -o CMakeFiles/demo_tutorial_sequences_assignment_3.dir/tutorial/sequences/assignment_3.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequences/assignment_3.cpp [ 79%] Linking CXX executable ../bin/demo_tutorial_sequences_assignment_1_solution cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sequences_assignment_1_solution.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_sequences_assignment_1_solution.dir/link.d CMakeFiles/demo_tutorial_sequences_assignment_1_solution.dir/tutorial/sequences/assignment_1_solution.cpp.o -o ../bin/demo_tutorial_sequences_assignment_1_solution -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 79%] Built target demo_tutorial_sequences_assignment_1_solution make -f demos/CMakeFiles/demo_tutorial_sequences_assignment_3_solution.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_assignment_3_solution.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_assignment_3_solution.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_sequences_assignment_3_solution.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_assignment_3_solution.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 79%] Building CXX object demos/CMakeFiles/demo_tutorial_sequences_assignment_3_solution.dir/tutorial/sequences/assignment_3_solution.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_sequences_assignment_3_solution.dir/tutorial/sequences/assignment_3_solution.cpp.o -MF CMakeFiles/demo_tutorial_sequences_assignment_3_solution.dir/tutorial/sequences/assignment_3_solution.cpp.o.d -o CMakeFiles/demo_tutorial_sequences_assignment_3_solution.dir/tutorial/sequences/assignment_3_solution.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequences/assignment_3_solution.cpp [ 79%] Linking CXX executable ../bin/demo_tutorial_sequence_io_solution2 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sequence_io_solution2.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_sequence_io_solution2.dir/link.d CMakeFiles/demo_tutorial_sequence_io_solution2.dir/tutorial/sequence_io/solution2.cpp.o -o ../bin/demo_tutorial_sequence_io_solution2 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 79%] Built target demo_tutorial_sequence_io_solution2 make -f demos/CMakeFiles/demo_tutorial_sequences_assignment_4_solution.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_assignment_4_solution.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_assignment_4_solution.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_sequences_assignment_4_solution.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_assignment_4_solution.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 79%] Building CXX object demos/CMakeFiles/demo_tutorial_sequences_assignment_4_solution.dir/tutorial/sequences/assignment_4_solution.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_sequences_assignment_4_solution.dir/tutorial/sequences/assignment_4_solution.cpp.o -MF CMakeFiles/demo_tutorial_sequences_assignment_4_solution.dir/tutorial/sequences/assignment_4_solution.cpp.o.d -o CMakeFiles/demo_tutorial_sequences_assignment_4_solution.dir/tutorial/sequences/assignment_4_solution.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequences/assignment_4_solution.cpp [ 79%] Linking CXX executable ../bin/demo_tutorial_sequence_io_solution3 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sequence_io_solution3.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_sequence_io_solution3.dir/link.d CMakeFiles/demo_tutorial_sequence_io_solution3.dir/tutorial/sequence_io/solution3.cpp.o -o ../bin/demo_tutorial_sequence_io_solution3 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 79%] Built target demo_tutorial_sequence_io_solution3 make -f demos/CMakeFiles/demo_tutorial_sequences_assignment_5_solution.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_assignment_5_solution.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_assignment_5_solution.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_sequences_assignment_5_solution.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_assignment_5_solution.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 79%] Building CXX object demos/CMakeFiles/demo_tutorial_sequences_assignment_5_solution.dir/tutorial/sequences/assignment_5_solution.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_sequences_assignment_5_solution.dir/tutorial/sequences/assignment_5_solution.cpp.o -MF CMakeFiles/demo_tutorial_sequences_assignment_5_solution.dir/tutorial/sequences/assignment_5_solution.cpp.o.d -o CMakeFiles/demo_tutorial_sequences_assignment_5_solution.dir/tutorial/sequences/assignment_5_solution.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequences/assignment_5_solution.cpp [ 79%] Linking CXX executable ../bin/demo_tutorial_sequences_assignment_3 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sequences_assignment_3.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_sequences_assignment_3.dir/link.d CMakeFiles/demo_tutorial_sequences_assignment_3.dir/tutorial/sequences/assignment_3.cpp.o -o ../bin/demo_tutorial_sequences_assignment_3 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 79%] Linking CXX executable ../bin/demo_tutorial_sequences_assignment_3_solution [ 79%] Built target demo_tutorial_sequences_assignment_3 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sequences_assignment_3_solution.dir/link.txt --verbose=1 make -f demos/CMakeFiles/demo_tutorial_sequences_assignment_6_solution.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_assignment_6_solution.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_assignment_6_solution.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_sequences_assignment_6_solution.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_assignment_6_solution.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 79%] Building CXX object demos/CMakeFiles/demo_tutorial_sequences_assignment_6_solution.dir/tutorial/sequences/assignment_6_solution.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_sequences_assignment_6_solution.dir/tutorial/sequences/assignment_6_solution.cpp.o -MF CMakeFiles/demo_tutorial_sequences_assignment_6_solution.dir/tutorial/sequences/assignment_6_solution.cpp.o.d -o CMakeFiles/demo_tutorial_sequences_assignment_6_solution.dir/tutorial/sequences/assignment_6_solution.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequences/assignment_6_solution.cpp /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_sequences_assignment_3_solution.dir/link.d CMakeFiles/demo_tutorial_sequences_assignment_3_solution.dir/tutorial/sequences/assignment_3_solution.cpp.o -o ../bin/demo_tutorial_sequences_assignment_3_solution -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 79%] Built target demo_tutorial_sequences_assignment_3_solution make -f demos/CMakeFiles/demo_tutorial_sequences_base.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_base.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_base.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_sequences_base.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_base.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 79%] Building CXX object demos/CMakeFiles/demo_tutorial_sequences_base.dir/tutorial/sequences/base.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_sequences_base.dir/tutorial/sequences/base.cpp.o -MF CMakeFiles/demo_tutorial_sequences_base.dir/tutorial/sequences/base.cpp.o.d -o CMakeFiles/demo_tutorial_sequences_base.dir/tutorial/sequences/base.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequences/base.cpp [ 79%] Linking CXX executable ../bin/demo_tutorial_sequences_assignment_2_solution cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sequences_assignment_2_solution.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_sequences_assignment_2_solution.dir/link.d CMakeFiles/demo_tutorial_sequences_assignment_2_solution.dir/tutorial/sequences/assignment_2_solution.cpp.o -o ../bin/demo_tutorial_sequences_assignment_2_solution -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 79%] Built target demo_tutorial_sequences_assignment_2_solution make -f demos/CMakeFiles/demo_tutorial_sequences_example_comparisons.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_example_comparisons.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_example_comparisons.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_sequences_example_comparisons.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_example_comparisons.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 79%] Building CXX object demos/CMakeFiles/demo_tutorial_sequences_example_comparisons.dir/tutorial/sequences/example_comparisons.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_sequences_example_comparisons.dir/tutorial/sequences/example_comparisons.cpp.o -MF CMakeFiles/demo_tutorial_sequences_example_comparisons.dir/tutorial/sequences/example_comparisons.cpp.o.d -o CMakeFiles/demo_tutorial_sequences_example_comparisons.dir/tutorial/sequences/example_comparisons.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequences/example_comparisons.cpp [ 79%] Linking CXX executable ../bin/demo_tutorial_sequences_assignment_4_solution cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sequences_assignment_4_solution.dir/link.txt --verbose=1 [ 79%] Linking CXX executable ../bin/demo_tutorial_sequences_assignment_5_solution /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sequences_assignment_5_solution.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_sequences_assignment_4_solution.dir/link.d CMakeFiles/demo_tutorial_sequences_assignment_4_solution.dir/tutorial/sequences/assignment_4_solution.cpp.o -o ../bin/demo_tutorial_sequences_assignment_4_solution -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 79%] Built target demo_tutorial_sequences_assignment_4_solution make -f demos/CMakeFiles/demo_tutorial_sequences_example_conversions_copy.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_example_conversions_copy.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_example_conversions_copy.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_sequences_example_conversions_copy.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_example_conversions_copy.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. [ 79%] Building CXX object demos/CMakeFiles/demo_tutorial_sequences_example_conversions_copy.dir/tutorial/sequences/example_conversions_copy.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_sequences_example_conversions_copy.dir/tutorial/sequences/example_conversions_copy.cpp.o -MF CMakeFiles/demo_tutorial_sequences_example_conversions_copy.dir/tutorial/sequences/example_conversions_copy.cpp.o.d -o CMakeFiles/demo_tutorial_sequences_example_conversions_copy.dir/tutorial/sequences/example_conversions_copy.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequences/example_conversions_copy.cpp /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_sequences_assignment_5_solution.dir/link.d CMakeFiles/demo_tutorial_sequences_assignment_5_solution.dir/tutorial/sequences/assignment_5_solution.cpp.o -o ../bin/demo_tutorial_sequences_assignment_5_solution -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 79%] Built target demo_tutorial_sequences_assignment_5_solution make -f demos/CMakeFiles/demo_tutorial_sequences_example_conversions_move.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_example_conversions_move.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_example_conversions_move.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_sequences_example_conversions_move.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_example_conversions_move.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 79%] Building CXX object demos/CMakeFiles/demo_tutorial_sequences_example_conversions_move.dir/tutorial/sequences/example_conversions_move.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_sequences_example_conversions_move.dir/tutorial/sequences/example_conversions_move.cpp.o -MF CMakeFiles/demo_tutorial_sequences_example_conversions_move.dir/tutorial/sequences/example_conversions_move.cpp.o.d -o CMakeFiles/demo_tutorial_sequences_example_conversions_move.dir/tutorial/sequences/example_conversions_move.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequences/example_conversions_move.cpp [ 80%] Linking CXX executable ../bin/demo_tutorial_sequences_example_comparisons cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sequences_example_comparisons.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_sequences_example_comparisons.dir/link.d CMakeFiles/demo_tutorial_sequences_example_comparisons.dir/tutorial/sequences/example_comparisons.cpp.o -o ../bin/demo_tutorial_sequences_example_comparisons -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 80%] Built target demo_tutorial_sequences_example_comparisons make -f demos/CMakeFiles/demo_tutorial_sequences_example_functionality1.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_example_functionality1.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_example_functionality1.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_sequences_example_functionality1.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_example_functionality1.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 80%] Building CXX object demos/CMakeFiles/demo_tutorial_sequences_example_functionality1.dir/tutorial/sequences/example_functionality1.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_sequences_example_functionality1.dir/tutorial/sequences/example_functionality1.cpp.o -MF CMakeFiles/demo_tutorial_sequences_example_functionality1.dir/tutorial/sequences/example_functionality1.cpp.o.d -o CMakeFiles/demo_tutorial_sequences_example_functionality1.dir/tutorial/sequences/example_functionality1.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequences/example_functionality1.cpp [ 80%] Linking CXX executable ../bin/demo_tutorial_sequences_base cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sequences_base.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_sequences_base.dir/link.d CMakeFiles/demo_tutorial_sequences_base.dir/tutorial/sequences/base.cpp.o -o ../bin/demo_tutorial_sequences_base -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 80%] Built target demo_tutorial_sequences_base make -f demos/CMakeFiles/demo_tutorial_sequences_example_functionality2.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_example_functionality2.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_example_functionality2.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_sequences_example_functionality2.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_example_functionality2.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 80%] Building CXX object demos/CMakeFiles/demo_tutorial_sequences_example_functionality2.dir/tutorial/sequences/example_functionality2.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_sequences_example_functionality2.dir/tutorial/sequences/example_functionality2.cpp.o -MF CMakeFiles/demo_tutorial_sequences_example_functionality2.dir/tutorial/sequences/example_functionality2.cpp.o.d -o CMakeFiles/demo_tutorial_sequences_example_functionality2.dir/tutorial/sequences/example_functionality2.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequences/example_functionality2.cpp [ 80%] Linking CXX executable ../bin/demo_tutorial_sequences_assignment_6_solution cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sequences_assignment_6_solution.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_sequences_assignment_6_solution.dir/link.d CMakeFiles/demo_tutorial_sequences_assignment_6_solution.dir/tutorial/sequences/assignment_6_solution.cpp.o -o ../bin/demo_tutorial_sequences_assignment_6_solution -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 80%] Built target demo_tutorial_sequences_assignment_6_solution make -f demos/CMakeFiles/demo_tutorial_sequences_example_segments.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_example_segments.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_example_segments.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_sequences_example_segments.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_example_segments.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 80%] Building CXX object demos/CMakeFiles/demo_tutorial_sequences_example_segments.dir/tutorial/sequences/example_segments.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_sequences_example_segments.dir/tutorial/sequences/example_segments.cpp.o -MF CMakeFiles/demo_tutorial_sequences_example_segments.dir/tutorial/sequences/example_segments.cpp.o.d -o CMakeFiles/demo_tutorial_sequences_example_segments.dir/tutorial/sequences/example_segments.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequences/example_segments.cpp [ 80%] Linking CXX executable ../bin/demo_tutorial_sequences_example_conversions_move cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sequences_example_conversions_move.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. [ 80%] Linking CXX executable ../bin/demo_tutorial_sequences_example_conversions_copy cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sequences_example_conversions_copy.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_sequences_example_conversions_move.dir/link.d CMakeFiles/demo_tutorial_sequences_example_conversions_move.dir/tutorial/sequences/example_conversions_move.cpp.o -o ../bin/demo_tutorial_sequences_example_conversions_move -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 80%] Built target demo_tutorial_sequences_example_conversions_move make -f demos/CMakeFiles/demo_tutorial_sequences_in_depth_assignment_exact_generous_solution.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_in_depth_assignment_exact_generous_solution.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_in_depth_assignment_exact_generous_solution.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_sequences_in_depth_assignment_exact_generous_solution.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_in_depth_assignment_exact_generous_solution.dir/build /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 80%] Building CXX object demos/CMakeFiles/demo_tutorial_sequences_in_depth_assignment_exact_generous_solution.dir/tutorial/sequences_in_depth/assignment_exact_generous_solution.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_sequences_in_depth_assignment_exact_generous_solution.dir/tutorial/sequences_in_depth/assignment_exact_generous_solution.cpp.o -MF CMakeFiles/demo_tutorial_sequences_in_depth_assignment_exact_generous_solution.dir/tutorial/sequences_in_depth/assignment_exact_generous_solution.cpp.o.d -o CMakeFiles/demo_tutorial_sequences_in_depth_assignment_exact_generous_solution.dir/tutorial/sequences_in_depth/assignment_exact_generous_solution.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequences_in_depth/assignment_exact_generous_solution.cpp /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_sequences_example_conversions_copy.dir/link.d CMakeFiles/demo_tutorial_sequences_example_conversions_copy.dir/tutorial/sequences/example_conversions_copy.cpp.o -o ../bin/demo_tutorial_sequences_example_conversions_copy -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 80%] Built target demo_tutorial_sequences_example_conversions_copy make -f demos/CMakeFiles/demo_tutorial_sequences_in_depth_base.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_in_depth_base.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_in_depth_base.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_sequences_in_depth_base.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_in_depth_base.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 80%] Building CXX object demos/CMakeFiles/demo_tutorial_sequences_in_depth_base.dir/tutorial/sequences_in_depth/base.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_sequences_in_depth_base.dir/tutorial/sequences_in_depth/base.cpp.o -MF CMakeFiles/demo_tutorial_sequences_in_depth_base.dir/tutorial/sequences_in_depth/base.cpp.o.d -o CMakeFiles/demo_tutorial_sequences_in_depth_base.dir/tutorial/sequences_in_depth/base.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequences_in_depth/base.cpp [ 80%] Linking CXX executable ../bin/demo_tutorial_sequences_example_functionality1 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sequences_example_functionality1.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_sequences_example_functionality1.dir/link.d CMakeFiles/demo_tutorial_sequences_example_functionality1.dir/tutorial/sequences/example_functionality1.cpp.o -o ../bin/demo_tutorial_sequences_example_functionality1 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 80%] Built target demo_tutorial_sequences_example_functionality1 make -f demos/CMakeFiles/demo_tutorial_sequences_in_depth_example_overflow.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_in_depth_example_overflow.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_sequences_in_depth_example_overflow.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_sequences_in_depth_example_overflow.dir/build.make demos/CMakeFiles/demo_tutorial_sequences_in_depth_example_overflow.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 80%] Building CXX object demos/CMakeFiles/demo_tutorial_sequences_in_depth_example_overflow.dir/tutorial/sequences_in_depth/example_overflow.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_sequences_in_depth_example_overflow.dir/tutorial/sequences_in_depth/example_overflow.cpp.o -MF CMakeFiles/demo_tutorial_sequences_in_depth_example_overflow.dir/tutorial/sequences_in_depth/example_overflow.cpp.o.d -o CMakeFiles/demo_tutorial_sequences_in_depth_example_overflow.dir/tutorial/sequences_in_depth/example_overflow.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequences_in_depth/example_overflow.cpp [ 80%] Linking CXX executable ../bin/demo_tutorial_seed_and_extend_example7 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_seed_and_extend_example7.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. [ 80%] Linking CXX executable ../bin/demo_tutorial_sequences_example_segments cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sequences_example_segments.dir/link.txt --verbose=1 [ 80%] Linking CXX executable ../bin/demo_tutorial_sequence_io_solution4 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sequence_io_solution4.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_seed_and_extend_example7.dir/link.d CMakeFiles/demo_tutorial_seed_and_extend_example7.dir/tutorial/seed_and_extend/example7.cpp.o -o ../bin/demo_tutorial_seed_and_extend_example7 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 80%] Built target demo_tutorial_seed_and_extend_example7 make -f demos/CMakeFiles/demo_tutorial_simple_genome_alignment_lagan.dir/build.make demos/CMakeFiles/demo_tutorial_simple_genome_alignment_lagan.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_simple_genome_alignment_lagan.dir/DependInfo.cmake "--color=" /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_sequences_example_segments.dir/link.d CMakeFiles/demo_tutorial_sequences_example_segments.dir/tutorial/sequences/example_segments.cpp.o -o ../bin/demo_tutorial_sequences_example_segments -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_simple_genome_alignment_lagan.dir/build.make demos/CMakeFiles/demo_tutorial_simple_genome_alignment_lagan.dir/build [ 80%] Built target demo_tutorial_sequences_example_segments make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_base.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_base.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_simple_rna_seq_base.dir/DependInfo.cmake "--color=" /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. [ 80%] Building CXX object demos/CMakeFiles/demo_tutorial_simple_genome_alignment_lagan.dir/tutorial/simple_genome_alignment/lagan.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_simple_genome_alignment_lagan.dir/tutorial/simple_genome_alignment/lagan.cpp.o -MF CMakeFiles/demo_tutorial_simple_genome_alignment_lagan.dir/tutorial/simple_genome_alignment/lagan.cpp.o.d -o CMakeFiles/demo_tutorial_simple_genome_alignment_lagan.dir/tutorial/simple_genome_alignment/lagan.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/simple_genome_alignment/lagan.cpp make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_base.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_base.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 80%] Building CXX object demos/CMakeFiles/demo_tutorial_simple_rna_seq_base.dir/tutorial/simple_rna_seq/base.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_simple_rna_seq_base.dir/tutorial/simple_rna_seq/base.cpp.o -MF CMakeFiles/demo_tutorial_simple_rna_seq_base.dir/tutorial/simple_rna_seq/base.cpp.o.d -o CMakeFiles/demo_tutorial_simple_rna_seq_base.dir/tutorial/simple_rna_seq/base.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/simple_rna_seq/base.cpp /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_sequence_io_solution4.dir/link.d CMakeFiles/demo_tutorial_sequence_io_solution4.dir/tutorial/sequence_io/solution4.cpp.o -o ../bin/demo_tutorial_sequence_io_solution4 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 80%] Built target demo_tutorial_sequence_io_solution4 make -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment1.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment1.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment1.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment1.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 80%] Building CXX object demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment1.dir/tutorial/simple_rna_seq/genequant_assignment1.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment1.dir/tutorial/simple_rna_seq/genequant_assignment1.cpp.o -MF CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment1.dir/tutorial/simple_rna_seq/genequant_assignment1.cpp.o.d -o CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment1.dir/tutorial/simple_rna_seq/genequant_assignment1.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/simple_rna_seq/genequant_assignment1.cpp [ 80%] Linking CXX executable ../bin/demo_tutorial_sequences_in_depth_base cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sequences_in_depth_base.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_sequences_in_depth_base.dir/link.d CMakeFiles/demo_tutorial_sequences_in_depth_base.dir/tutorial/sequences_in_depth/base.cpp.o -o ../bin/demo_tutorial_sequences_in_depth_base -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 80%] Built target demo_tutorial_sequences_in_depth_base make -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment2.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment2.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment2.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment2.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment2.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 80%] Building CXX object demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment2.dir/tutorial/simple_rna_seq/genequant_assignment2.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment2.dir/tutorial/simple_rna_seq/genequant_assignment2.cpp.o -MF CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment2.dir/tutorial/simple_rna_seq/genequant_assignment2.cpp.o.d -o CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment2.dir/tutorial/simple_rna_seq/genequant_assignment2.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/simple_rna_seq/genequant_assignment2.cpp [ 81%] Linking CXX executable ../bin/demo_tutorial_sequences_in_depth_assignment_exact_generous_solution cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sequences_in_depth_assignment_exact_generous_solution.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_sequences_in_depth_assignment_exact_generous_solution.dir/link.d CMakeFiles/demo_tutorial_sequences_in_depth_assignment_exact_generous_solution.dir/tutorial/sequences_in_depth/assignment_exact_generous_solution.cpp.o -o ../bin/demo_tutorial_sequences_in_depth_assignment_exact_generous_solution -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 81%] Built target demo_tutorial_sequences_in_depth_assignment_exact_generous_solution make -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment3.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment3.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment3.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment3.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment3.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 81%] Building CXX object demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment3.dir/tutorial/simple_rna_seq/genequant_assignment3.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment3.dir/tutorial/simple_rna_seq/genequant_assignment3.cpp.o -MF CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment3.dir/tutorial/simple_rna_seq/genequant_assignment3.cpp.o.d -o CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment3.dir/tutorial/simple_rna_seq/genequant_assignment3.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/simple_rna_seq/genequant_assignment3.cpp [ 81%] Linking CXX executable ../bin/demo_tutorial_sequences_example_functionality2 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sequences_example_functionality2.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_sequences_example_functionality2.dir/link.d CMakeFiles/demo_tutorial_sequences_example_functionality2.dir/tutorial/sequences/example_functionality2.cpp.o -o ../bin/demo_tutorial_sequences_example_functionality2 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 81%] Built target demo_tutorial_sequences_example_functionality2 make -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment4.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment4.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment4.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment4.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment4.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 81%] Building CXX object demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment4.dir/tutorial/simple_rna_seq/genequant_assignment4.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment4.dir/tutorial/simple_rna_seq/genequant_assignment4.cpp.o -MF CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment4.dir/tutorial/simple_rna_seq/genequant_assignment4.cpp.o.d -o CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment4.dir/tutorial/simple_rna_seq/genequant_assignment4.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/simple_rna_seq/genequant_assignment4.cpp [ 81%] Linking CXX executable ../bin/demo_tutorial_sequences_in_depth_example_overflow cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_sequences_in_depth_example_overflow.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_sequences_in_depth_example_overflow.dir/link.d CMakeFiles/demo_tutorial_sequences_in_depth_example_overflow.dir/tutorial/sequences_in_depth/example_overflow.cpp.o -o ../bin/demo_tutorial_sequences_in_depth_example_overflow -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 81%] Built target demo_tutorial_sequences_in_depth_example_overflow make -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment5.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment5.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment5.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment5.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment5.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 81%] Building CXX object demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment5.dir/tutorial/simple_rna_seq/genequant_assignment5.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment5.dir/tutorial/simple_rna_seq/genequant_assignment5.cpp.o -MF CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment5.dir/tutorial/simple_rna_seq/genequant_assignment5.cpp.o.d -o CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment5.dir/tutorial/simple_rna_seq/genequant_assignment5.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/simple_rna_seq/genequant_assignment5.cpp [ 81%] Linking CXX executable ../bin/demo_tutorial_seed_and_extend_solution6 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_seed_and_extend_solution6.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_seed_and_extend_solution6.dir/link.d CMakeFiles/demo_tutorial_seed_and_extend_solution6.dir/tutorial/seed_and_extend/solution6.cpp.o -o ../bin/demo_tutorial_seed_and_extend_solution6 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 81%] Built target demo_tutorial_seed_and_extend_solution6 make -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution1.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution1.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution1.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 81%] Building CXX object demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution1.dir/tutorial/simple_rna_seq/genequant_solution1.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution1.dir/tutorial/simple_rna_seq/genequant_solution1.cpp.o -MF CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution1.dir/tutorial/simple_rna_seq/genequant_solution1.cpp.o.d -o CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution1.dir/tutorial/simple_rna_seq/genequant_solution1.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/simple_rna_seq/genequant_solution1.cpp [ 81%] Linking CXX executable ../bin/demo_tutorial_simple_rna_seq_genequant_assignment1 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment1.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment1.dir/link.d CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment1.dir/tutorial/simple_rna_seq/genequant_assignment1.cpp.o -o ../bin/demo_tutorial_simple_rna_seq_genequant_assignment1 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 81%] Built target demo_tutorial_simple_rna_seq_genequant_assignment1 make -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution2.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution2.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution2.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution2.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution2.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 81%] Building CXX object demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution2.dir/tutorial/simple_rna_seq/genequant_solution2.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution2.dir/tutorial/simple_rna_seq/genequant_solution2.cpp.o -MF CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution2.dir/tutorial/simple_rna_seq/genequant_solution2.cpp.o.d -o CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution2.dir/tutorial/simple_rna_seq/genequant_solution2.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/simple_rna_seq/genequant_solution2.cpp [ 81%] Linking CXX executable ../bin/demo_tutorial_simple_rna_seq_base cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_simple_rna_seq_base.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_simple_rna_seq_base.dir/link.d CMakeFiles/demo_tutorial_simple_rna_seq_base.dir/tutorial/simple_rna_seq/base.cpp.o -o ../bin/demo_tutorial_simple_rna_seq_base -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 81%] Built target demo_tutorial_simple_rna_seq_base make -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution3.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution3.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution3.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution3.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution3.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 81%] Building CXX object demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution3.dir/tutorial/simple_rna_seq/genequant_solution3.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution3.dir/tutorial/simple_rna_seq/genequant_solution3.cpp.o -MF CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution3.dir/tutorial/simple_rna_seq/genequant_solution3.cpp.o.d -o CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution3.dir/tutorial/simple_rna_seq/genequant_solution3.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/simple_rna_seq/genequant_solution3.cpp [ 82%] Linking CXX executable ../bin/demo_tutorial_simple_rna_seq_genequant_assignment2 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment2.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment2.dir/link.d CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment2.dir/tutorial/simple_rna_seq/genequant_assignment2.cpp.o -o ../bin/demo_tutorial_simple_rna_seq_genequant_assignment2 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 82%] Built target demo_tutorial_simple_rna_seq_genequant_assignment2 make -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution4.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution4.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution4.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution4.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution4.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 84%] Building CXX object demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution4.dir/tutorial/simple_rna_seq/genequant_solution4.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution4.dir/tutorial/simple_rna_seq/genequant_solution4.cpp.o -MF CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution4.dir/tutorial/simple_rna_seq/genequant_solution4.cpp.o.d -o CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution4.dir/tutorial/simple_rna_seq/genequant_solution4.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/simple_rna_seq/genequant_solution4.cpp [ 84%] Linking CXX executable ../bin/demo_tutorial_simple_rna_seq_genequant_assignment3 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment3.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment3.dir/link.d CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment3.dir/tutorial/simple_rna_seq/genequant_assignment3.cpp.o -o ../bin/demo_tutorial_simple_rna_seq_genequant_assignment3 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 84%] Built target demo_tutorial_simple_rna_seq_genequant_assignment3 make -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution5.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution5.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution5.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution5.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution5.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 84%] Building CXX object demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution5.dir/tutorial/simple_rna_seq/genequant_solution5.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution5.dir/tutorial/simple_rna_seq/genequant_solution5.cpp.o -MF CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution5.dir/tutorial/simple_rna_seq/genequant_solution5.cpp.o.d -o CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution5.dir/tutorial/simple_rna_seq/genequant_solution5.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/simple_rna_seq/genequant_solution5.cpp [ 84%] Linking CXX executable ../bin/demo_tutorial_simple_rna_seq_genequant_solution1 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution1.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution1.dir/link.d CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution1.dir/tutorial/simple_rna_seq/genequant_solution1.cpp.o -o ../bin/demo_tutorial_simple_rna_seq_genequant_solution1 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 84%] Built target demo_tutorial_simple_rna_seq_genequant_solution1 make -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_interval_tree.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_interval_tree.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_simple_rna_seq_interval_tree.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_simple_rna_seq_interval_tree.dir/build.make demos/CMakeFiles/demo_tutorial_simple_rna_seq_interval_tree.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 84%] Linking CXX executable ../bin/demo_tutorial_simple_rna_seq_genequant_assignment4 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment4.dir/link.txt --verbose=1 [ 84%] Building CXX object demos/CMakeFiles/demo_tutorial_simple_rna_seq_interval_tree.dir/tutorial/simple_rna_seq/interval_tree.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_simple_rna_seq_interval_tree.dir/tutorial/simple_rna_seq/interval_tree.cpp.o -MF CMakeFiles/demo_tutorial_simple_rna_seq_interval_tree.dir/tutorial/simple_rna_seq/interval_tree.cpp.o.d -o CMakeFiles/demo_tutorial_simple_rna_seq_interval_tree.dir/tutorial/simple_rna_seq/interval_tree.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/simple_rna_seq/interval_tree.cpp /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment4.dir/link.d CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment4.dir/tutorial/simple_rna_seq/genequant_assignment4.cpp.o -o ../bin/demo_tutorial_simple_rna_seq_genequant_assignment4 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 84%] Built target demo_tutorial_simple_rna_seq_genequant_assignment4 make -f demos/CMakeFiles/demo_tutorial_string_sets_assignment_1_solution.dir/build.make demos/CMakeFiles/demo_tutorial_string_sets_assignment_1_solution.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_string_sets_assignment_1_solution.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_string_sets_assignment_1_solution.dir/build.make demos/CMakeFiles/demo_tutorial_string_sets_assignment_1_solution.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 84%] Building CXX object demos/CMakeFiles/demo_tutorial_string_sets_assignment_1_solution.dir/tutorial/string_sets/assignment_1_solution.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_string_sets_assignment_1_solution.dir/tutorial/string_sets/assignment_1_solution.cpp.o -MF CMakeFiles/demo_tutorial_string_sets_assignment_1_solution.dir/tutorial/string_sets/assignment_1_solution.cpp.o.d -o CMakeFiles/demo_tutorial_string_sets_assignment_1_solution.dir/tutorial/string_sets/assignment_1_solution.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/string_sets/assignment_1_solution.cpp [ 84%] Linking CXX executable ../bin/demo_tutorial_simple_rna_seq_genequant_assignment5 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment5.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment5.dir/link.d CMakeFiles/demo_tutorial_simple_rna_seq_genequant_assignment5.dir/tutorial/simple_rna_seq/genequant_assignment5.cpp.o -o ../bin/demo_tutorial_simple_rna_seq_genequant_assignment5 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 84%] Built target demo_tutorial_simple_rna_seq_genequant_assignment5 make -f demos/CMakeFiles/demo_tutorial_string_sets_assignment_2.dir/build.make demos/CMakeFiles/demo_tutorial_string_sets_assignment_2.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_string_sets_assignment_2.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_string_sets_assignment_2.dir/build.make demos/CMakeFiles/demo_tutorial_string_sets_assignment_2.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 84%] Building CXX object demos/CMakeFiles/demo_tutorial_string_sets_assignment_2.dir/tutorial/string_sets/assignment_2.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_string_sets_assignment_2.dir/tutorial/string_sets/assignment_2.cpp.o -MF CMakeFiles/demo_tutorial_string_sets_assignment_2.dir/tutorial/string_sets/assignment_2.cpp.o.d -o CMakeFiles/demo_tutorial_string_sets_assignment_2.dir/tutorial/string_sets/assignment_2.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/string_sets/assignment_2.cpp [ 84%] Linking CXX executable ../bin/demo_tutorial_simple_rna_seq_genequant_solution2 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution2.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution2.dir/link.d CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution2.dir/tutorial/simple_rna_seq/genequant_solution2.cpp.o -o ../bin/demo_tutorial_simple_rna_seq_genequant_solution2 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 84%] Built target demo_tutorial_simple_rna_seq_genequant_solution2 make -f demos/CMakeFiles/demo_tutorial_string_sets_assignment_2_solution.dir/build.make demos/CMakeFiles/demo_tutorial_string_sets_assignment_2_solution.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_string_sets_assignment_2_solution.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_string_sets_assignment_2_solution.dir/build.make demos/CMakeFiles/demo_tutorial_string_sets_assignment_2_solution.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 84%] Building CXX object demos/CMakeFiles/demo_tutorial_string_sets_assignment_2_solution.dir/tutorial/string_sets/assignment_2_solution.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_string_sets_assignment_2_solution.dir/tutorial/string_sets/assignment_2_solution.cpp.o -MF CMakeFiles/demo_tutorial_string_sets_assignment_2_solution.dir/tutorial/string_sets/assignment_2_solution.cpp.o.d -o CMakeFiles/demo_tutorial_string_sets_assignment_2_solution.dir/tutorial/string_sets/assignment_2_solution.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/string_sets/assignment_2_solution.cpp [ 84%] Linking CXX executable ../bin/demo_tutorial_string_sets_assignment_1_solution cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_string_sets_assignment_1_solution.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. [ 84%] Linking CXX executable ../bin/demo_tutorial_simple_rna_seq_genequant_solution3 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution3.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_string_sets_assignment_1_solution.dir/link.d CMakeFiles/demo_tutorial_string_sets_assignment_1_solution.dir/tutorial/string_sets/assignment_1_solution.cpp.o -o ../bin/demo_tutorial_string_sets_assignment_1_solution -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 84%] Built target demo_tutorial_string_sets_assignment_1_solution make -f demos/CMakeFiles/demo_tutorial_string_sets_assignment_3_workshop_solution.dir/build.make demos/CMakeFiles/demo_tutorial_string_sets_assignment_3_workshop_solution.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_string_sets_assignment_3_workshop_solution.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_string_sets_assignment_3_workshop_solution.dir/build.make demos/CMakeFiles/demo_tutorial_string_sets_assignment_3_workshop_solution.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. [ 85%] Building CXX object demos/CMakeFiles/demo_tutorial_string_sets_assignment_3_workshop_solution.dir/tutorial/string_sets/assignment_3_workshop_solution.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_string_sets_assignment_3_workshop_solution.dir/tutorial/string_sets/assignment_3_workshop_solution.cpp.o -MF CMakeFiles/demo_tutorial_string_sets_assignment_3_workshop_solution.dir/tutorial/string_sets/assignment_3_workshop_solution.cpp.o.d -o CMakeFiles/demo_tutorial_string_sets_assignment_3_workshop_solution.dir/tutorial/string_sets/assignment_3_workshop_solution.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/string_sets/assignment_3_workshop_solution.cpp /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution3.dir/link.d CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution3.dir/tutorial/simple_rna_seq/genequant_solution3.cpp.o -o ../bin/demo_tutorial_simple_rna_seq_genequant_solution3 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 85%] Built target demo_tutorial_simple_rna_seq_genequant_solution3 make -f demos/CMakeFiles/demo_tutorial_string_sets_assignment_4_workshop_solution.dir/build.make demos/CMakeFiles/demo_tutorial_string_sets_assignment_4_workshop_solution.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_string_sets_assignment_4_workshop_solution.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_string_sets_assignment_4_workshop_solution.dir/build.make demos/CMakeFiles/demo_tutorial_string_sets_assignment_4_workshop_solution.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 85%] Building CXX object demos/CMakeFiles/demo_tutorial_string_sets_assignment_4_workshop_solution.dir/tutorial/string_sets/assignment_4_workshop_solution.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_string_sets_assignment_4_workshop_solution.dir/tutorial/string_sets/assignment_4_workshop_solution.cpp.o -MF CMakeFiles/demo_tutorial_string_sets_assignment_4_workshop_solution.dir/tutorial/string_sets/assignment_4_workshop_solution.cpp.o.d -o CMakeFiles/demo_tutorial_string_sets_assignment_4_workshop_solution.dir/tutorial/string_sets/assignment_4_workshop_solution.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/string_sets/assignment_4_workshop_solution.cpp [ 85%] Linking CXX executable ../bin/demo_tutorial_string_sets_assignment_2 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_string_sets_assignment_2.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_string_sets_assignment_2.dir/link.d CMakeFiles/demo_tutorial_string_sets_assignment_2.dir/tutorial/string_sets/assignment_2.cpp.o -o ../bin/demo_tutorial_string_sets_assignment_2 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 85%] Built target demo_tutorial_string_sets_assignment_2 make -f demos/CMakeFiles/demo_tutorial_string_sets_base.dir/build.make demos/CMakeFiles/demo_tutorial_string_sets_base.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_string_sets_base.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_string_sets_base.dir/build.make demos/CMakeFiles/demo_tutorial_string_sets_base.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 85%] Building CXX object demos/CMakeFiles/demo_tutorial_string_sets_base.dir/tutorial/string_sets/base.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_string_sets_base.dir/tutorial/string_sets/base.cpp.o -MF CMakeFiles/demo_tutorial_string_sets_base.dir/tutorial/string_sets/base.cpp.o.d -o CMakeFiles/demo_tutorial_string_sets_base.dir/tutorial/string_sets/base.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/string_sets/base.cpp [ 85%] Linking CXX executable ../bin/demo_tutorial_string_sets_assignment_2_solution cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_string_sets_assignment_2_solution.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_string_sets_assignment_2_solution.dir/link.d CMakeFiles/demo_tutorial_string_sets_assignment_2_solution.dir/tutorial/string_sets/assignment_2_solution.cpp.o -o ../bin/demo_tutorial_string_sets_assignment_2_solution -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 85%] Built target demo_tutorial_string_sets_assignment_2_solution make -f demos/CMakeFiles/demo_tutorial_string_sets_example_functionality.dir/build.make demos/CMakeFiles/demo_tutorial_string_sets_example_functionality.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_string_sets_example_functionality.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_string_sets_example_functionality.dir/build.make demos/CMakeFiles/demo_tutorial_string_sets_example_functionality.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 85%] Building CXX object demos/CMakeFiles/demo_tutorial_string_sets_example_functionality.dir/tutorial/string_sets/example_functionality.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_string_sets_example_functionality.dir/tutorial/string_sets/example_functionality.cpp.o -MF CMakeFiles/demo_tutorial_string_sets_example_functionality.dir/tutorial/string_sets/example_functionality.cpp.o.d -o CMakeFiles/demo_tutorial_string_sets_example_functionality.dir/tutorial/string_sets/example_functionality.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/string_sets/example_functionality.cpp [ 85%] Linking CXX executable ../bin/demo_tutorial_string_sets_base cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_string_sets_base.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_string_sets_base.dir/link.d CMakeFiles/demo_tutorial_string_sets_base.dir/tutorial/string_sets/base.cpp.o -o ../bin/demo_tutorial_string_sets_base -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 85%] Built target demo_tutorial_string_sets_base make -f demos/CMakeFiles/demo_tutorial_string_sets_example_functionality_2.dir/build.make demos/CMakeFiles/demo_tutorial_string_sets_example_functionality_2.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_string_sets_example_functionality_2.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_string_sets_example_functionality_2.dir/build.make demos/CMakeFiles/demo_tutorial_string_sets_example_functionality_2.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 85%] Building CXX object demos/CMakeFiles/demo_tutorial_string_sets_example_functionality_2.dir/tutorial/string_sets/example_functionality_2.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_string_sets_example_functionality_2.dir/tutorial/string_sets/example_functionality_2.cpp.o -MF CMakeFiles/demo_tutorial_string_sets_example_functionality_2.dir/tutorial/string_sets/example_functionality_2.cpp.o.d -o CMakeFiles/demo_tutorial_string_sets_example_functionality_2.dir/tutorial/string_sets/example_functionality_2.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/string_sets/example_functionality_2.cpp [ 85%] Linking CXX executable ../bin/demo_tutorial_simple_rna_seq_interval_tree cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_simple_rna_seq_interval_tree.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_simple_rna_seq_interval_tree.dir/link.d CMakeFiles/demo_tutorial_simple_rna_seq_interval_tree.dir/tutorial/simple_rna_seq/interval_tree.cpp.o -o ../bin/demo_tutorial_simple_rna_seq_interval_tree -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 85%] Built target demo_tutorial_simple_rna_seq_interval_tree make -f demos/CMakeFiles/demo_tutorial_string_sets_example_iterators.dir/build.make demos/CMakeFiles/demo_tutorial_string_sets_example_iterators.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_string_sets_example_iterators.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_string_sets_example_iterators.dir/build.make demos/CMakeFiles/demo_tutorial_string_sets_example_iterators.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 85%] Building CXX object demos/CMakeFiles/demo_tutorial_string_sets_example_iterators.dir/tutorial/string_sets/example_iterators.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_string_sets_example_iterators.dir/tutorial/string_sets/example_iterators.cpp.o -MF CMakeFiles/demo_tutorial_string_sets_example_iterators.dir/tutorial/string_sets/example_iterators.cpp.o.d -o CMakeFiles/demo_tutorial_string_sets_example_iterators.dir/tutorial/string_sets/example_iterators.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/string_sets/example_iterators.cpp [ 85%] Linking CXX executable ../bin/demo_tutorial_string_sets_assignment_3_workshop_solution cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_string_sets_assignment_3_workshop_solution.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_string_sets_assignment_3_workshop_solution.dir/link.d CMakeFiles/demo_tutorial_string_sets_assignment_3_workshop_solution.dir/tutorial/string_sets/assignment_3_workshop_solution.cpp.o -o ../bin/demo_tutorial_string_sets_assignment_3_workshop_solution -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 85%] Built target demo_tutorial_string_sets_assignment_3_workshop_solution make -f demos/CMakeFiles/demo_tutorial_vcf_io_base.dir/build.make demos/CMakeFiles/demo_tutorial_vcf_io_base.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_vcf_io_base.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_vcf_io_base.dir/build.make demos/CMakeFiles/demo_tutorial_vcf_io_base.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 86%] Building CXX object demos/CMakeFiles/demo_tutorial_vcf_io_base.dir/tutorial/vcf_io/base.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_vcf_io_base.dir/tutorial/vcf_io/base.cpp.o -MF CMakeFiles/demo_tutorial_vcf_io_base.dir/tutorial/vcf_io/base.cpp.o.d -o CMakeFiles/demo_tutorial_vcf_io_base.dir/tutorial/vcf_io/base.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/vcf_io/base.cpp [ 86%] Linking CXX executable ../bin/demo_tutorial_string_sets_assignment_4_workshop_solution cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_string_sets_assignment_4_workshop_solution.dir/link.txt --verbose=1 [ 86%] Linking CXX executable ../bin/demo_tutorial_string_sets_example_functionality cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_string_sets_example_functionality.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_string_sets_assignment_4_workshop_solution.dir/link.d CMakeFiles/demo_tutorial_string_sets_assignment_4_workshop_solution.dir/tutorial/string_sets/assignment_4_workshop_solution.cpp.o -o ../bin/demo_tutorial_string_sets_assignment_4_workshop_solution -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_string_sets_example_functionality.dir/link.d CMakeFiles/demo_tutorial_string_sets_example_functionality.dir/tutorial/string_sets/example_functionality.cpp.o -o ../bin/demo_tutorial_string_sets_example_functionality -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 86%] Built target demo_tutorial_string_sets_example_functionality make -f demos/CMakeFiles/demo_tutorial_vcf_io_example1.dir/build.make demos/CMakeFiles/demo_tutorial_vcf_io_example1.dir/depend [ 86%] Built target demo_tutorial_string_sets_assignment_4_workshop_solution make -f demos/CMakeFiles/demo_tutorial_vcf_io_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_vcf_io_solution1.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_vcf_io_solution1.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_vcf_io_example1.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_vcf_io_solution1.dir/build.make demos/CMakeFiles/demo_tutorial_vcf_io_solution1.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_vcf_io_example1.dir/build.make demos/CMakeFiles/demo_tutorial_vcf_io_example1.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 86%] Building CXX object demos/CMakeFiles/demo_tutorial_vcf_io_solution1.dir/tutorial/vcf_io/solution1.cpp.o [ 86%] Building CXX object demos/CMakeFiles/demo_tutorial_vcf_io_example1.dir/tutorial/vcf_io/example1.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_vcf_io_solution1.dir/tutorial/vcf_io/solution1.cpp.o -MF CMakeFiles/demo_tutorial_vcf_io_solution1.dir/tutorial/vcf_io/solution1.cpp.o.d -o CMakeFiles/demo_tutorial_vcf_io_solution1.dir/tutorial/vcf_io/solution1.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/vcf_io/solution1.cpp cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_vcf_io_example1.dir/tutorial/vcf_io/example1.cpp.o -MF CMakeFiles/demo_tutorial_vcf_io_example1.dir/tutorial/vcf_io/example1.cpp.o.d -o CMakeFiles/demo_tutorial_vcf_io_example1.dir/tutorial/vcf_io/example1.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/vcf_io/example1.cpp [ 86%] Linking CXX executable ../bin/demo_tutorial_vcf_io_base cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_vcf_io_base.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_vcf_io_base.dir/link.d CMakeFiles/demo_tutorial_vcf_io_base.dir/tutorial/vcf_io/base.cpp.o -o ../bin/demo_tutorial_vcf_io_base -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 86%] Built target demo_tutorial_vcf_io_base make -f demos/CMakeFiles/demo_tutorial_vcf_io_solution2.dir/build.make demos/CMakeFiles/demo_tutorial_vcf_io_solution2.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_vcf_io_solution2.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_vcf_io_solution2.dir/build.make demos/CMakeFiles/demo_tutorial_vcf_io_solution2.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 86%] Building CXX object demos/CMakeFiles/demo_tutorial_vcf_io_solution2.dir/tutorial/vcf_io/solution2.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_vcf_io_solution2.dir/tutorial/vcf_io/solution2.cpp.o -MF CMakeFiles/demo_tutorial_vcf_io_solution2.dir/tutorial/vcf_io/solution2.cpp.o.d -o CMakeFiles/demo_tutorial_vcf_io_solution2.dir/tutorial/vcf_io/solution2.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/vcf_io/solution2.cpp [ 86%] Linking CXX executable ../bin/demo_tutorial_string_sets_example_functionality_2 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_string_sets_example_functionality_2.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_string_sets_example_functionality_2.dir/link.d CMakeFiles/demo_tutorial_string_sets_example_functionality_2.dir/tutorial/string_sets/example_functionality_2.cpp.o -o ../bin/demo_tutorial_string_sets_example_functionality_2 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 86%] Built target demo_tutorial_string_sets_example_functionality_2 make -f demos/CMakeFiles/demo_tutorial_vcf_io_solution3.dir/build.make demos/CMakeFiles/demo_tutorial_vcf_io_solution3.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_vcf_io_solution3.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_vcf_io_solution3.dir/build.make demos/CMakeFiles/demo_tutorial_vcf_io_solution3.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 86%] Building CXX object demos/CMakeFiles/demo_tutorial_vcf_io_solution3.dir/tutorial/vcf_io/solution3.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_vcf_io_solution3.dir/tutorial/vcf_io/solution3.cpp.o -MF CMakeFiles/demo_tutorial_vcf_io_solution3.dir/tutorial/vcf_io/solution3.cpp.o.d -o CMakeFiles/demo_tutorial_vcf_io_solution3.dir/tutorial/vcf_io/solution3.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/vcf_io/solution3.cpp [ 86%] Linking CXX executable ../bin/demo_tutorial_string_sets_example_iterators cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_string_sets_example_iterators.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_string_sets_example_iterators.dir/link.d CMakeFiles/demo_tutorial_string_sets_example_iterators.dir/tutorial/string_sets/example_iterators.cpp.o -o ../bin/demo_tutorial_string_sets_example_iterators -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 86%] Built target demo_tutorial_string_sets_example_iterators make -f demos/CMakeFiles/demo_tutorial_workflows_knime_node.dir/build.make demos/CMakeFiles/demo_tutorial_workflows_knime_node.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_tutorial_workflows_knime_node.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_tutorial_workflows_knime_node.dir/build.make demos/CMakeFiles/demo_tutorial_workflows_knime_node.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 86%] Building CXX object demos/CMakeFiles/demo_tutorial_workflows_knime_node.dir/tutorial/workflows/knime_node.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_tutorial_workflows_knime_node.dir/tutorial/workflows/knime_node.cpp.o -MF CMakeFiles/demo_tutorial_workflows_knime_node.dir/tutorial/workflows/knime_node.cpp.o.d -o CMakeFiles/demo_tutorial_workflows_knime_node.dir/tutorial/workflows/knime_node.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/tutorial/workflows/knime_node.cpp [ 86%] Linking CXX executable ../bin/demo_tutorial_vcf_io_solution3 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_vcf_io_solution3.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_vcf_io_solution3.dir/link.d CMakeFiles/demo_tutorial_vcf_io_solution3.dir/tutorial/vcf_io/solution3.cpp.o -o ../bin/demo_tutorial_vcf_io_solution3 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 86%] Built target demo_tutorial_vcf_io_solution3 make -f demos/CMakeFiles/demo_unassigned_or_unused_alphabet.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_alphabet.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_alphabet.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_alphabet.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_alphabet.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 86%] Linking CXX executable ../bin/demo_tutorial_vcf_io_solution2 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_vcf_io_solution2.dir/link.txt --verbose=1 [ 86%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_alphabet.dir/unassigned_or_unused/alphabet.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_alphabet.dir/unassigned_or_unused/alphabet.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_alphabet.dir/unassigned_or_unused/alphabet.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_alphabet.dir/unassigned_or_unused/alphabet.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/alphabet.cpp /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. [ 86%] Linking CXX executable ../bin/demo_tutorial_simple_rna_seq_genequant_solution4 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution4.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_vcf_io_solution2.dir/link.d CMakeFiles/demo_tutorial_vcf_io_solution2.dir/tutorial/vcf_io/solution2.cpp.o -o ../bin/demo_tutorial_vcf_io_solution2 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 86%] Built target demo_tutorial_vcf_io_solution2 make -f demos/CMakeFiles/demo_unassigned_or_unused_annotation_converter.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_annotation_converter.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_annotation_converter.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_annotation_converter.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_annotation_converter.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution4.dir/link.d CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution4.dir/tutorial/simple_rna_seq/genequant_solution4.cpp.o -o ../bin/demo_tutorial_simple_rna_seq_genequant_solution4 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 86%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_annotation_converter.dir/unassigned_or_unused/annotation_converter.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_annotation_converter.dir/unassigned_or_unused/annotation_converter.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_annotation_converter.dir/unassigned_or_unused/annotation_converter.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_annotation_converter.dir/unassigned_or_unused/annotation_converter.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/annotation_converter.cpp [ 86%] Built target demo_tutorial_simple_rna_seq_genequant_solution4 make -f demos/CMakeFiles/demo_unassigned_or_unused_arg_align.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_arg_align.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_arg_align.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_arg_align.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_arg_align.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 86%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_arg_align.dir/unassigned_or_unused/arg_align.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_arg_align.dir/unassigned_or_unused/arg_align.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_arg_align.dir/unassigned_or_unused/arg_align.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_arg_align.dir/unassigned_or_unused/arg_align.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/arg_align.cpp [ 86%] Linking CXX executable ../bin/demo_tutorial_vcf_io_example1 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_vcf_io_example1.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. [ 87%] Linking CXX executable ../bin/demo_unassigned_or_unused_alphabet cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_alphabet.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_vcf_io_example1.dir/link.d CMakeFiles/demo_tutorial_vcf_io_example1.dir/tutorial/vcf_io/example1.cpp.o -o ../bin/demo_tutorial_vcf_io_example1 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 87%] Built target demo_tutorial_vcf_io_example1 make -f demos/CMakeFiles/demo_unassigned_or_unused_bam_library_size.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_bam_library_size.dir/depend [ 87%] Linking CXX executable ../bin/demo_tutorial_vcf_io_solution1 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_vcf_io_solution1.dir/link.txt --verbose=1 make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_bam_library_size.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_bam_library_size.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_bam_library_size.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 87%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_bam_library_size.dir/unassigned_or_unused/bam_library_size.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_bam_library_size.dir/unassigned_or_unused/bam_library_size.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_bam_library_size.dir/unassigned_or_unused/bam_library_size.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_bam_library_size.dir/unassigned_or_unused/bam_library_size.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/bam_library_size.cpp /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_alphabet.dir/link.d CMakeFiles/demo_unassigned_or_unused_alphabet.dir/unassigned_or_unused/alphabet.cpp.o -o ../bin/demo_unassigned_or_unused_alphabet -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 87%] Built target demo_unassigned_or_unused_alphabet make -f demos/CMakeFiles/demo_unassigned_or_unused_bam_print_alignments.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_bam_print_alignments.dir/depend /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_vcf_io_solution1.dir/link.d CMakeFiles/demo_tutorial_vcf_io_solution1.dir/tutorial/vcf_io/solution1.cpp.o -o ../bin/demo_tutorial_vcf_io_solution1 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 87%] Built target demo_tutorial_vcf_io_solution1 make -f demos/CMakeFiles/demo_unassigned_or_unused_bamutil.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_bamutil.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_bamutil.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_bam_print_alignments.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_bam_print_alignments.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_bam_print_alignments.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_bamutil.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_bamutil.dir/build [ 87%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_bam_print_alignments.dir/unassigned_or_unused/bam_print_alignments.cpp.o make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_bam_print_alignments.dir/unassigned_or_unused/bam_print_alignments.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_bam_print_alignments.dir/unassigned_or_unused/bam_print_alignments.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_bam_print_alignments.dir/unassigned_or_unused/bam_print_alignments.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/bam_print_alignments.cpp [ 87%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_bamutil.dir/unassigned_or_unused/bamutil.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_bamutil.dir/unassigned_or_unused/bamutil.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_bamutil.dir/unassigned_or_unused/bamutil.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_bamutil.dir/unassigned_or_unused/bamutil.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/bamutil.cpp [ 87%] Linking CXX executable ../bin/demo_tutorial_simple_rna_seq_genequant_solution5 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution5.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution5.dir/link.d CMakeFiles/demo_tutorial_simple_rna_seq_genequant_solution5.dir/tutorial/simple_rna_seq/genequant_solution5.cpp.o -o ../bin/demo_tutorial_simple_rna_seq_genequant_solution5 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 87%] Built target demo_tutorial_simple_rna_seq_genequant_solution5 make -f demos/CMakeFiles/demo_unassigned_or_unused_benchmark_stream.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_benchmark_stream.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_benchmark_stream.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_benchmark_stream.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_benchmark_stream.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 87%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_benchmark_stream.dir/unassigned_or_unused/benchmark_stream.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_benchmark_stream.dir/unassigned_or_unused/benchmark_stream.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_benchmark_stream.dir/unassigned_or_unused/benchmark_stream.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_benchmark_stream.dir/unassigned_or_unused/benchmark_stream.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/benchmark_stream.cpp [ 87%] Linking CXX executable ../bin/demo_unassigned_or_unused_arg_align cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_arg_align.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_arg_align.dir/link.d CMakeFiles/demo_unassigned_or_unused_arg_align.dir/unassigned_or_unused/arg_align.cpp.o -o ../bin/demo_unassigned_or_unused_arg_align -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 87%] Built target demo_unassigned_or_unused_arg_align make -f demos/CMakeFiles/demo_unassigned_or_unused_benchmark_stream_write.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_benchmark_stream_write.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_benchmark_stream_write.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_benchmark_stream_write.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_benchmark_stream_write.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 87%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_benchmark_stream_write.dir/unassigned_or_unused/benchmark_stream_write.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_benchmark_stream_write.dir/unassigned_or_unused/benchmark_stream_write.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_benchmark_stream_write.dir/unassigned_or_unused/benchmark_stream_write.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_benchmark_stream_write.dir/unassigned_or_unused/benchmark_stream_write.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/benchmark_stream_write.cpp [ 87%] Linking CXX executable ../bin/demo_unassigned_or_unused_bam_library_size cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_bam_library_size.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_bam_library_size.dir/link.d CMakeFiles/demo_unassigned_or_unused_bam_library_size.dir/unassigned_or_unused/bam_library_size.cpp.o -o ../bin/demo_unassigned_or_unused_bam_library_size -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 87%] Built target demo_unassigned_or_unused_bam_library_size make -f demos/CMakeFiles/demo_unassigned_or_unused_file_format.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_file_format.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_file_format.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_file_format.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_file_format.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 87%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_file_format.dir/unassigned_or_unused/file_format.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_file_format.dir/unassigned_or_unused/file_format.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_file_format.dir/unassigned_or_unused/file_format.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_file_format.dir/unassigned_or_unused/file_format.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/file_format.cpp [ 87%] Linking CXX executable ../bin/demo_unassigned_or_unused_benchmark_stream_write cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_benchmark_stream_write.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_benchmark_stream_write.dir/link.d CMakeFiles/demo_unassigned_or_unused_benchmark_stream_write.dir/unassigned_or_unused/benchmark_stream_write.cpp.o -o ../bin/demo_unassigned_or_unused_benchmark_stream_write -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 87%] Built target demo_unassigned_or_unused_benchmark_stream_write make -f demos/CMakeFiles/demo_unassigned_or_unused_file_readwrite.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_file_readwrite.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_file_readwrite.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_file_readwrite.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_file_readwrite.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 87%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_file_readwrite.dir/unassigned_or_unused/file_readwrite.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_file_readwrite.dir/unassigned_or_unused/file_readwrite.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_file_readwrite.dir/unassigned_or_unused/file_readwrite.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_file_readwrite.dir/unassigned_or_unused/file_readwrite.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/file_readwrite.cpp [ 87%] Linking CXX executable ../bin/demo_unassigned_or_unused_bam_print_alignments cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_bam_print_alignments.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_bam_print_alignments.dir/link.d CMakeFiles/demo_unassigned_or_unused_bam_print_alignments.dir/unassigned_or_unused/bam_print_alignments.cpp.o -o ../bin/demo_unassigned_or_unused_bam_print_alignments -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 87%] Built target demo_unassigned_or_unused_bam_print_alignments make -f demos/CMakeFiles/demo_unassigned_or_unused_file_speed.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_file_speed.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_file_speed.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_file_speed.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_file_speed.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 87%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_file_speed.dir/unassigned_or_unused/file_speed.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_file_speed.dir/unassigned_or_unused/file_speed.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_file_speed.dir/unassigned_or_unused/file_speed.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_file_speed.dir/unassigned_or_unused/file_speed.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/file_speed.cpp [ 87%] Linking CXX executable ../bin/demo_unassigned_or_unused_file_readwrite cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_file_readwrite.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_file_readwrite.dir/link.d CMakeFiles/demo_unassigned_or_unused_file_readwrite.dir/unassigned_or_unused/file_readwrite.cpp.o -o ../bin/demo_unassigned_or_unused_file_readwrite -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 87%] Built target demo_unassigned_or_unused_file_readwrite make -f demos/CMakeFiles/demo_unassigned_or_unused_filter_sam.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_filter_sam.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_filter_sam.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_filter_sam.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_filter_sam.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 87%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_filter_sam.dir/unassigned_or_unused/filter_sam.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_filter_sam.dir/unassigned_or_unused/filter_sam.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_filter_sam.dir/unassigned_or_unused/filter_sam.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_filter_sam.dir/unassigned_or_unused/filter_sam.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/filter_sam.cpp [ 87%] Linking CXX executable ../bin/demo_tutorial_simple_genome_alignment_lagan cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_simple_genome_alignment_lagan.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_simple_genome_alignment_lagan.dir/link.d CMakeFiles/demo_tutorial_simple_genome_alignment_lagan.dir/tutorial/simple_genome_alignment/lagan.cpp.o -o ../bin/demo_tutorial_simple_genome_alignment_lagan -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 87%] Built target demo_tutorial_simple_genome_alignment_lagan make -f demos/CMakeFiles/demo_unassigned_or_unused_find_wild.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_find_wild.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_find_wild.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_find_wild.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_find_wild.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 87%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_find_wild.dir/unassigned_or_unused/find_wild.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_find_wild.dir/unassigned_or_unused/find_wild.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_find_wild.dir/unassigned_or_unused/find_wild.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_find_wild.dir/unassigned_or_unused/find_wild.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/find_wild.cpp [ 87%] Linking CXX executable ../bin/demo_unassigned_or_unused_file_format cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_file_format.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_file_format.dir/link.d CMakeFiles/demo_unassigned_or_unused_file_format.dir/unassigned_or_unused/file_format.cpp.o -o ../bin/demo_unassigned_or_unused_file_format -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 87%] Built target demo_unassigned_or_unused_file_format make -f demos/CMakeFiles/demo_unassigned_or_unused_gff2gtf.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_gff2gtf.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_gff2gtf.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_gff2gtf.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_gff2gtf.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 87%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_gff2gtf.dir/unassigned_or_unused/gff2gtf.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_gff2gtf.dir/unassigned_or_unused/gff2gtf.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_gff2gtf.dir/unassigned_or_unused/gff2gtf.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_gff2gtf.dir/unassigned_or_unused/gff2gtf.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/gff2gtf.cpp [ 87%] Linking CXX executable ../bin/demo_unassigned_or_unused_file_speed cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_file_speed.dir/link.txt --verbose=1 [ 88%] Linking CXX executable ../bin/demo_unassigned_or_unused_find_wild cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_find_wild.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_file_speed.dir/link.d CMakeFiles/demo_unassigned_or_unused_file_speed.dir/unassigned_or_unused/file_speed.cpp.o -o ../bin/demo_unassigned_or_unused_file_speed -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. [ 88%] Built target demo_unassigned_or_unused_file_speed make -f demos/CMakeFiles/demo_unassigned_or_unused_graph_hmm_silent.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_graph_hmm_silent.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_graph_hmm_silent.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_graph_hmm_silent.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_graph_hmm_silent.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_find_wild.dir/link.d CMakeFiles/demo_unassigned_or_unused_find_wild.dir/unassigned_or_unused/find_wild.cpp.o -o ../bin/demo_unassigned_or_unused_find_wild -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 88%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_graph_hmm_silent.dir/unassigned_or_unused/graph_hmm_silent.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_graph_hmm_silent.dir/unassigned_or_unused/graph_hmm_silent.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_graph_hmm_silent.dir/unassigned_or_unused/graph_hmm_silent.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_graph_hmm_silent.dir/unassigned_or_unused/graph_hmm_silent.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/graph_hmm_silent.cpp [ 88%] Built target demo_unassigned_or_unused_find_wild make -f demos/CMakeFiles/demo_unassigned_or_unused_index_find.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_index_find.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_index_find.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_index_find.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_index_find.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 88%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_index_find.dir/unassigned_or_unused/index_find.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_index_find.dir/unassigned_or_unused/index_find.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_index_find.dir/unassigned_or_unused/index_find.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_index_find.dir/unassigned_or_unused/index_find.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/index_find.cpp [ 88%] Linking CXX executable ../bin/demo_tutorial_workflows_knime_node cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_tutorial_workflows_knime_node.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_tutorial_workflows_knime_node.dir/link.d CMakeFiles/demo_tutorial_workflows_knime_node.dir/tutorial/workflows/knime_node.cpp.o -o ../bin/demo_tutorial_workflows_knime_node -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 88%] Built target demo_tutorial_workflows_knime_node make -f demos/CMakeFiles/demo_unassigned_or_unused_index_find_stringset.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_index_find_stringset.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_index_find_stringset.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_index_find_stringset.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_index_find_stringset.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 88%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_index_find_stringset.dir/unassigned_or_unused/index_find_stringset.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_index_find_stringset.dir/unassigned_or_unused/index_find_stringset.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_index_find_stringset.dir/unassigned_or_unused/index_find_stringset.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_index_find_stringset.dir/unassigned_or_unused/index_find_stringset.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/index_find_stringset.cpp [ 88%] Linking CXX executable ../bin/demo_unassigned_or_unused_annotation_converter cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_annotation_converter.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_annotation_converter.dir/link.d CMakeFiles/demo_unassigned_or_unused_annotation_converter.dir/unassigned_or_unused/annotation_converter.cpp.o -o ../bin/demo_unassigned_or_unused_annotation_converter -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 88%] Built target demo_unassigned_or_unused_annotation_converter make -f demos/CMakeFiles/demo_unassigned_or_unused_index_lcp.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_index_lcp.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_index_lcp.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_index_lcp.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_index_lcp.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 88%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_index_lcp.dir/unassigned_or_unused/index_lcp.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_index_lcp.dir/unassigned_or_unused/index_lcp.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_index_lcp.dir/unassigned_or_unused/index_lcp.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_index_lcp.dir/unassigned_or_unused/index_lcp.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/index_lcp.cpp [ 88%] Linking CXX executable ../bin/demo_unassigned_or_unused_index_find cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_index_find.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_index_find.dir/link.d CMakeFiles/demo_unassigned_or_unused_index_find.dir/unassigned_or_unused/index_find.cpp.o -o ../bin/demo_unassigned_or_unused_index_find -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 88%] Built target demo_unassigned_or_unused_index_find make -f demos/CMakeFiles/demo_unassigned_or_unused_index_mums.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_index_mums.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_index_mums.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_index_mums.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_index_mums.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 88%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_index_mums.dir/unassigned_or_unused/index_mums.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_index_mums.dir/unassigned_or_unused/index_mums.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_index_mums.dir/unassigned_or_unused/index_mums.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_index_mums.dir/unassigned_or_unused/index_mums.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/index_mums.cpp [ 88%] Linking CXX executable ../bin/demo_unassigned_or_unused_graph_hmm_silent cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_graph_hmm_silent.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_graph_hmm_silent.dir/link.d CMakeFiles/demo_unassigned_or_unused_graph_hmm_silent.dir/unassigned_or_unused/graph_hmm_silent.cpp.o -o ../bin/demo_unassigned_or_unused_graph_hmm_silent -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 88%] Built target demo_unassigned_or_unused_graph_hmm_silent make -f demos/CMakeFiles/demo_unassigned_or_unused_index_node_predicate.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_index_node_predicate.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_index_node_predicate.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_index_node_predicate.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_index_node_predicate.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 89%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_index_node_predicate.dir/unassigned_or_unused/index_node_predicate.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_index_node_predicate.dir/unassigned_or_unused/index_node_predicate.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_index_node_predicate.dir/unassigned_or_unused/index_node_predicate.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_index_node_predicate.dir/unassigned_or_unused/index_node_predicate.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/index_node_predicate.cpp [ 89%] Linking CXX executable ../bin/demo_unassigned_or_unused_bamutil cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_bamutil.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. [ 90%] Linking CXX executable ../bin/demo_unassigned_or_unused_benchmark_stream cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_benchmark_stream.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_bamutil.dir/link.d CMakeFiles/demo_unassigned_or_unused_bamutil.dir/unassigned_or_unused/bamutil.cpp.o -o ../bin/demo_unassigned_or_unused_bamutil -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. [ 90%] Built target demo_unassigned_or_unused_bamutil make -f demos/CMakeFiles/demo_unassigned_or_unused_index_qgram_counts.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_index_qgram_counts.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_index_qgram_counts.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_index_qgram_counts.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_index_qgram_counts.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 90%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_index_qgram_counts.dir/unassigned_or_unused/index_qgram_counts.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_index_qgram_counts.dir/unassigned_or_unused/index_qgram_counts.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_index_qgram_counts.dir/unassigned_or_unused/index_qgram_counts.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_index_qgram_counts.dir/unassigned_or_unused/index_qgram_counts.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/index_qgram_counts.cpp /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_benchmark_stream.dir/link.d CMakeFiles/demo_unassigned_or_unused_benchmark_stream.dir/unassigned_or_unused/benchmark_stream.cpp.o -o ../bin/demo_unassigned_or_unused_benchmark_stream -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 90%] Built target demo_unassigned_or_unused_benchmark_stream make -f demos/CMakeFiles/demo_unassigned_or_unused_index_sufarray.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_index_sufarray.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_index_sufarray.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_index_sufarray.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_index_sufarray.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 90%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_index_sufarray.dir/unassigned_or_unused/index_sufarray.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_index_sufarray.dir/unassigned_or_unused/index_sufarray.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_index_sufarray.dir/unassigned_or_unused/index_sufarray.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_index_sufarray.dir/unassigned_or_unused/index_sufarray.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/index_sufarray.cpp [ 90%] Linking CXX executable ../bin/demo_unassigned_or_unused_index_node_predicate cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_index_node_predicate.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_index_node_predicate.dir/link.d CMakeFiles/demo_unassigned_or_unused_index_node_predicate.dir/unassigned_or_unused/index_node_predicate.cpp.o -o ../bin/demo_unassigned_or_unused_index_node_predicate -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 90%] Built target demo_unassigned_or_unused_index_node_predicate make -f demos/CMakeFiles/demo_unassigned_or_unused_index_supermaxrepeats.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_index_supermaxrepeats.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_index_supermaxrepeats.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_index_supermaxrepeats.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_index_supermaxrepeats.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 90%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_index_supermaxrepeats.dir/unassigned_or_unused/index_supermaxrepeats.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_index_supermaxrepeats.dir/unassigned_or_unused/index_supermaxrepeats.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_index_supermaxrepeats.dir/unassigned_or_unused/index_supermaxrepeats.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_index_supermaxrepeats.dir/unassigned_or_unused/index_supermaxrepeats.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/index_supermaxrepeats.cpp [ 90%] Linking CXX executable ../bin/demo_unassigned_or_unused_gff2gtf cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_gff2gtf.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_gff2gtf.dir/link.d CMakeFiles/demo_unassigned_or_unused_gff2gtf.dir/unassigned_or_unused/gff2gtf.cpp.o -o ../bin/demo_unassigned_or_unused_gff2gtf -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 90%] Built target demo_unassigned_or_unused_gff2gtf make -f demos/CMakeFiles/demo_unassigned_or_unused_iterator.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_iterator.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_iterator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_iterator.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_iterator.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 90%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_iterator.dir/unassigned_or_unused/iterator.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_iterator.dir/unassigned_or_unused/iterator.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_iterator.dir/unassigned_or_unused/iterator.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_iterator.dir/unassigned_or_unused/iterator.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/iterator.cpp [ 90%] Linking CXX executable ../bin/demo_unassigned_or_unused_index_qgram_counts cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_index_qgram_counts.dir/link.txt --verbose=1 [ 90%] Linking CXX executable ../bin/demo_unassigned_or_unused_index_sufarray cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_index_sufarray.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_index_sufarray.dir/link.d CMakeFiles/demo_unassigned_or_unused_index_sufarray.dir/unassigned_or_unused/index_sufarray.cpp.o -o ../bin/demo_unassigned_or_unused_index_sufarray -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. [ 90%] Built target demo_unassigned_or_unused_index_sufarray make -f demos/CMakeFiles/demo_unassigned_or_unused_minimapper.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_minimapper.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_minimapper.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_minimapper.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_minimapper.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_index_qgram_counts.dir/link.d CMakeFiles/demo_unassigned_or_unused_index_qgram_counts.dir/unassigned_or_unused/index_qgram_counts.cpp.o -o ../bin/demo_unassigned_or_unused_index_qgram_counts -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 90%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_minimapper.dir/unassigned_or_unused/minimapper.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_minimapper.dir/unassigned_or_unused/minimapper.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_minimapper.dir/unassigned_or_unused/minimapper.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_minimapper.dir/unassigned_or_unused/minimapper.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/minimapper.cpp [ 90%] Built target demo_unassigned_or_unused_index_qgram_counts make -f demos/CMakeFiles/demo_unassigned_or_unused_modifier_modreverse.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_modifier_modreverse.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_modifier_modreverse.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_modifier_modreverse.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_modifier_modreverse.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 91%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_modifier_modreverse.dir/unassigned_or_unused/modifier_modreverse.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_modifier_modreverse.dir/unassigned_or_unused/modifier_modreverse.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_modifier_modreverse.dir/unassigned_or_unused/modifier_modreverse.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_modifier_modreverse.dir/unassigned_or_unused/modifier_modreverse.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/modifier_modreverse.cpp [ 91%] Linking CXX executable ../bin/demo_unassigned_or_unused_iterator cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_iterator.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_iterator.dir/link.d CMakeFiles/demo_unassigned_or_unused_iterator.dir/unassigned_or_unused/iterator.cpp.o -o ../bin/demo_unassigned_or_unused_iterator -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 91%] Built target demo_unassigned_or_unused_iterator make -f demos/CMakeFiles/demo_unassigned_or_unused_modifier_modview.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_modifier_modview.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_modifier_modview.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_modifier_modview.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_modifier_modview.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 91%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_modifier_modview.dir/unassigned_or_unused/modifier_modview.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_modifier_modview.dir/unassigned_or_unused/modifier_modview.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_modifier_modview.dir/unassigned_or_unused/modifier_modview.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_modifier_modview.dir/unassigned_or_unused/modifier_modview.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/modifier_modview.cpp [ 91%] Linking CXX executable ../bin/demo_unassigned_or_unused_modifier_modreverse cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_modifier_modreverse.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_modifier_modreverse.dir/link.d CMakeFiles/demo_unassigned_or_unused_modifier_modreverse.dir/unassigned_or_unused/modifier_modreverse.cpp.o -o ../bin/demo_unassigned_or_unused_modifier_modreverse -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 91%] Built target demo_unassigned_or_unused_modifier_modreverse make -f demos/CMakeFiles/demo_unassigned_or_unused_modifier_nested.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_modifier_nested.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_modifier_nested.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_modifier_nested.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_modifier_nested.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 91%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_modifier_nested.dir/unassigned_or_unused/modifier_nested.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_modifier_nested.dir/unassigned_or_unused/modifier_nested.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_modifier_nested.dir/unassigned_or_unused/modifier_nested.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_modifier_nested.dir/unassigned_or_unused/modifier_nested.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/modifier_nested.cpp [ 91%] Linking CXX executable ../bin/demo_unassigned_or_unused_index_supermaxrepeats cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_index_supermaxrepeats.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_index_supermaxrepeats.dir/link.d CMakeFiles/demo_unassigned_or_unused_index_supermaxrepeats.dir/unassigned_or_unused/index_supermaxrepeats.cpp.o -o ../bin/demo_unassigned_or_unused_index_supermaxrepeats -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 91%] Built target demo_unassigned_or_unused_index_supermaxrepeats make -f demos/CMakeFiles/demo_unassigned_or_unused_parse_lm_stellar.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_parse_lm_stellar.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_parse_lm_stellar.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_parse_lm_stellar.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_parse_lm_stellar.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 91%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_parse_lm_stellar.dir/unassigned_or_unused/parse_lm_stellar.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_parse_lm_stellar.dir/unassigned_or_unused/parse_lm_stellar.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_parse_lm_stellar.dir/unassigned_or_unused/parse_lm_stellar.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_parse_lm_stellar.dir/unassigned_or_unused/parse_lm_stellar.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/parse_lm_stellar.cpp [ 91%] Linking CXX executable ../bin/demo_unassigned_or_unused_modifier_modview cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_modifier_modview.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_modifier_modview.dir/link.d CMakeFiles/demo_unassigned_or_unused_modifier_modview.dir/unassigned_or_unused/modifier_modview.cpp.o -o ../bin/demo_unassigned_or_unused_modifier_modview -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 91%] Built target demo_unassigned_or_unused_modifier_modview make -f demos/CMakeFiles/demo_unassigned_or_unused_rooted_iterator.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_rooted_iterator.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_rooted_iterator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_rooted_iterator.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_rooted_iterator.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 91%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_rooted_iterator.dir/unassigned_or_unused/rooted_iterator.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_rooted_iterator.dir/unassigned_or_unused/rooted_iterator.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_rooted_iterator.dir/unassigned_or_unused/rooted_iterator.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_rooted_iterator.dir/unassigned_or_unused/rooted_iterator.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/rooted_iterator.cpp [ 91%] Linking CXX executable ../bin/demo_unassigned_or_unused_modifier_nested cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_modifier_nested.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_modifier_nested.dir/link.d CMakeFiles/demo_unassigned_or_unused_modifier_nested.dir/unassigned_or_unused/modifier_nested.cpp.o -o ../bin/demo_unassigned_or_unused_modifier_nested -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 91%] Built target demo_unassigned_or_unused_modifier_nested make -f demos/CMakeFiles/demo_unassigned_or_unused_sam2svg.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_sam2svg.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_sam2svg.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_sam2svg.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_sam2svg.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 91%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_sam2svg.dir/unassigned_or_unused/sam2svg.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_sam2svg.dir/unassigned_or_unused/sam2svg.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_sam2svg.dir/unassigned_or_unused/sam2svg.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_sam2svg.dir/unassigned_or_unused/sam2svg.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/sam2svg.cpp [ 91%] Linking CXX executable ../bin/demo_unassigned_or_unused_rooted_iterator cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_rooted_iterator.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_rooted_iterator.dir/link.d CMakeFiles/demo_unassigned_or_unused_rooted_iterator.dir/unassigned_or_unused/rooted_iterator.cpp.o -o ../bin/demo_unassigned_or_unused_rooted_iterator -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 91%] Built target demo_unassigned_or_unused_rooted_iterator make -f demos/CMakeFiles/demo_unassigned_or_unused_sample_seqs.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_sample_seqs.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_sample_seqs.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_sample_seqs.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_sample_seqs.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 92%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_sample_seqs.dir/unassigned_or_unused/sample_seqs.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_sample_seqs.dir/unassigned_or_unused/sample_seqs.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_sample_seqs.dir/unassigned_or_unused/sample_seqs.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_sample_seqs.dir/unassigned_or_unused/sample_seqs.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/sample_seqs.cpp [ 92%] Linking CXX executable ../bin/demo_unassigned_or_unused_parse_lm_stellar cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_parse_lm_stellar.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_parse_lm_stellar.dir/link.d CMakeFiles/demo_unassigned_or_unused_parse_lm_stellar.dir/unassigned_or_unused/parse_lm_stellar.cpp.o -o ../bin/demo_unassigned_or_unused_parse_lm_stellar -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 92%] Built target demo_unassigned_or_unused_parse_lm_stellar make -f demos/CMakeFiles/demo_unassigned_or_unused_seeds.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_seeds.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_seeds.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_seeds.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_seeds.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 92%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_seeds.dir/unassigned_or_unused/seeds.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_seeds.dir/unassigned_or_unused/seeds.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_seeds.dir/unassigned_or_unused/seeds.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_seeds.dir/unassigned_or_unused/seeds.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/seeds.cpp [ 92%] Linking CXX executable ../bin/demo_unassigned_or_unused_seeds cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_seeds.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_seeds.dir/link.d CMakeFiles/demo_unassigned_or_unused_seeds.dir/unassigned_or_unused/seeds.cpp.o -o ../bin/demo_unassigned_or_unused_seeds -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 92%] Built target demo_unassigned_or_unused_seeds make -f demos/CMakeFiles/demo_unassigned_or_unused_segmentalignment.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_segmentalignment.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_segmentalignment.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_segmentalignment.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_segmentalignment.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 92%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_segmentalignment.dir/unassigned_or_unused/segmentalignment.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_segmentalignment.dir/unassigned_or_unused/segmentalignment.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_segmentalignment.dir/unassigned_or_unused/segmentalignment.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_segmentalignment.dir/unassigned_or_unused/segmentalignment.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/segmentalignment.cpp [ 92%] Linking CXX executable ../bin/demo_unassigned_or_unused_index_find_stringset cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_index_find_stringset.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_index_find_stringset.dir/link.d CMakeFiles/demo_unassigned_or_unused_index_find_stringset.dir/unassigned_or_unused/index_find_stringset.cpp.o -o ../bin/demo_unassigned_or_unused_index_find_stringset -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 92%] Built target demo_unassigned_or_unused_index_find_stringset make -f demos/CMakeFiles/demo_unassigned_or_unused_sequence_length.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_sequence_length.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_sequence_length.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_sequence_length.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_sequence_length.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 92%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_sequence_length.dir/unassigned_or_unused/sequence_length.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_sequence_length.dir/unassigned_or_unused/sequence_length.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_sequence_length.dir/unassigned_or_unused/sequence_length.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_sequence_length.dir/unassigned_or_unused/sequence_length.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/sequence_length.cpp [ 92%] Linking CXX executable ../bin/demo_unassigned_or_unused_index_lcp cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_index_lcp.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_index_lcp.dir/link.d CMakeFiles/demo_unassigned_or_unused_index_lcp.dir/unassigned_or_unused/index_lcp.cpp.o -o ../bin/demo_unassigned_or_unused_index_lcp -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 92%] Built target demo_unassigned_or_unused_index_lcp make -f demos/CMakeFiles/demo_unassigned_or_unused_soft_to_hard_masking.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_soft_to_hard_masking.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_soft_to_hard_masking.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_soft_to_hard_masking.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_soft_to_hard_masking.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 92%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_soft_to_hard_masking.dir/unassigned_or_unused/soft_to_hard_masking.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_soft_to_hard_masking.dir/unassigned_or_unused/soft_to_hard_masking.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_soft_to_hard_masking.dir/unassigned_or_unused/soft_to_hard_masking.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_soft_to_hard_masking.dir/unassigned_or_unused/soft_to_hard_masking.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/soft_to_hard_masking.cpp [ 92%] Linking CXX executable ../bin/demo_unassigned_or_unused_index_mums cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_index_mums.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_index_mums.dir/link.d CMakeFiles/demo_unassigned_or_unused_index_mums.dir/unassigned_or_unused/index_mums.cpp.o -o ../bin/demo_unassigned_or_unused_index_mums -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 92%] Built target demo_unassigned_or_unused_index_mums make -f demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_example1.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_example1.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_example1.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_example1.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_example1.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 92%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_example1.dir/unassigned_or_unused/tutorial_file_io/example1.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_example1.dir/unassigned_or_unused/tutorial_file_io/example1.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_example1.dir/unassigned_or_unused/tutorial_file_io/example1.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_example1.dir/unassigned_or_unused/tutorial_file_io/example1.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/tutorial_file_io/example1.cpp [ 92%] Linking CXX executable ../bin/demo_unassigned_or_unused_tutorial_file_io_example1 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_example1.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_example1.dir/link.d CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_example1.dir/unassigned_or_unused/tutorial_file_io/example1.cpp.o -o ../bin/demo_unassigned_or_unused_tutorial_file_io_example1 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 92%] Built target demo_unassigned_or_unused_tutorial_file_io_example1 make -f demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_mmap_string_example.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_mmap_string_example.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_mmap_string_example.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_mmap_string_example.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_mmap_string_example.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 92%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_mmap_string_example.dir/unassigned_or_unused/tutorial_file_io/mmap_string_example.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_mmap_string_example.dir/unassigned_or_unused/tutorial_file_io/mmap_string_example.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_mmap_string_example.dir/unassigned_or_unused/tutorial_file_io/mmap_string_example.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_mmap_string_example.dir/unassigned_or_unused/tutorial_file_io/mmap_string_example.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/tutorial_file_io/mmap_string_example.cpp [ 92%] Linking CXX executable ../bin/demo_unassigned_or_unused_minimapper cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_minimapper.dir/link.txt --verbose=1 [ 92%] Linking CXX executable ../bin/demo_unassigned_or_unused_sample_seqs cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_sample_seqs.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_sample_seqs.dir/link.d CMakeFiles/demo_unassigned_or_unused_sample_seqs.dir/unassigned_or_unused/sample_seqs.cpp.o -o ../bin/demo_unassigned_or_unused_sample_seqs -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 92%] Built target demo_unassigned_or_unused_sample_seqs make -f demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_solution1.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_solution1.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_solution1.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_solution1.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_solution1.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_minimapper.dir/link.d CMakeFiles/demo_unassigned_or_unused_minimapper.dir/unassigned_or_unused/minimapper.cpp.o -o ../bin/demo_unassigned_or_unused_minimapper -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 92%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_solution1.dir/unassigned_or_unused/tutorial_file_io/solution1.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_solution1.dir/unassigned_or_unused/tutorial_file_io/solution1.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_solution1.dir/unassigned_or_unused/tutorial_file_io/solution1.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_solution1.dir/unassigned_or_unused/tutorial_file_io/solution1.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/tutorial_file_io/solution1.cpp [ 92%] Built target demo_unassigned_or_unused_minimapper make -f demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_stream_compression_formats.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_stream_compression_formats.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_stream_compression_formats.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_stream_compression_formats.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_stream_compression_formats.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 92%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_stream_compression_formats.dir/unassigned_or_unused/tutorial_file_io/stream_compression_formats.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_stream_compression_formats.dir/unassigned_or_unused/tutorial_file_io/stream_compression_formats.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_stream_compression_formats.dir/unassigned_or_unused/tutorial_file_io/stream_compression_formats.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_stream_compression_formats.dir/unassigned_or_unused/tutorial_file_io/stream_compression_formats.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/tutorial_file_io/stream_compression_formats.cpp [ 93%] Linking CXX executable ../bin/demo_unassigned_or_unused_tutorial_file_io_mmap_string_example cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_mmap_string_example.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_mmap_string_example.dir/link.d CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_mmap_string_example.dir/unassigned_or_unused/tutorial_file_io/mmap_string_example.cpp.o -o ../bin/demo_unassigned_or_unused_tutorial_file_io_mmap_string_example -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 93%] Built target demo_unassigned_or_unused_tutorial_file_io_mmap_string_example make -f demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_characters.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_characters.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_characters.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_characters.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_characters.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 93%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_characters.dir/unassigned_or_unused/tutorial_sequence/count_characters.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_characters.dir/unassigned_or_unused/tutorial_sequence/count_characters.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_characters.dir/unassigned_or_unused/tutorial_sequence/count_characters.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_characters.dir/unassigned_or_unused/tutorial_sequence/count_characters.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/tutorial_sequence/count_characters.cpp [ 93%] Linking CXX executable ../bin/demo_unassigned_or_unused_tutorial_sequence_count_characters cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_characters.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_characters.dir/link.d CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_characters.dir/unassigned_or_unused/tutorial_sequence/count_characters.cpp.o -o ../bin/demo_unassigned_or_unused_tutorial_sequence_count_characters -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 93%] Built target demo_unassigned_or_unused_tutorial_sequence_count_characters make -f demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_generic_characters.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_generic_characters.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_generic_characters.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_generic_characters.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_generic_characters.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 93%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_generic_characters.dir/unassigned_or_unused/tutorial_sequence/count_generic_characters.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_generic_characters.dir/unassigned_or_unused/tutorial_sequence/count_generic_characters.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_generic_characters.dir/unassigned_or_unused/tutorial_sequence/count_generic_characters.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_generic_characters.dir/unassigned_or_unused/tutorial_sequence/count_generic_characters.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/tutorial_sequence/count_generic_characters.cpp [ 93%] Linking CXX executable ../bin/demo_unassigned_or_unused_tutorial_file_io_stream_compression_formats cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_stream_compression_formats.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_stream_compression_formats.dir/link.d CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_stream_compression_formats.dir/unassigned_or_unused/tutorial_file_io/stream_compression_formats.cpp.o -o ../bin/demo_unassigned_or_unused_tutorial_file_io_stream_compression_formats -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 93%] Built target demo_unassigned_or_unused_tutorial_file_io_stream_compression_formats make -f demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_replace_as.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_replace_as.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_replace_as.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_replace_as.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_replace_as.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 93%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_replace_as.dir/unassigned_or_unused/tutorial_sequence/replace_as.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_replace_as.dir/unassigned_or_unused/tutorial_sequence/replace_as.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_replace_as.dir/unassigned_or_unused/tutorial_sequence/replace_as.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_replace_as.dir/unassigned_or_unused/tutorial_sequence/replace_as.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/tutorial_sequence/replace_as.cpp [ 93%] Linking CXX executable ../bin/demo_unassigned_or_unused_sequence_length cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_sequence_length.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_sequence_length.dir/link.d CMakeFiles/demo_unassigned_or_unused_sequence_length.dir/unassigned_or_unused/sequence_length.cpp.o -o ../bin/demo_unassigned_or_unused_sequence_length -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 93%] Built target demo_unassigned_or_unused_sequence_length make -f demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_all_strings.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_all_strings.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_all_strings.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_all_strings.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_all_strings.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 93%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_all_strings.dir/unassigned_or_unused/tutorial_sequence/sequence_all_strings.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_all_strings.dir/unassigned_or_unused/tutorial_sequence/sequence_all_strings.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_all_strings.dir/unassigned_or_unused/tutorial_sequence/sequence_all_strings.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_all_strings.dir/unassigned_or_unused/tutorial_sequence/sequence_all_strings.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/tutorial_sequence/sequence_all_strings.cpp [ 93%] Linking CXX executable ../bin/demo_unassigned_or_unused_tutorial_file_io_solution1 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_solution1.dir/link.txt --verbose=1 [ 93%] Linking CXX executable ../bin/demo_unassigned_or_unused_filter_sam cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_filter_sam.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_solution1.dir/link.d CMakeFiles/demo_unassigned_or_unused_tutorial_file_io_solution1.dir/unassigned_or_unused/tutorial_file_io/solution1.cpp.o -o ../bin/demo_unassigned_or_unused_tutorial_file_io_solution1 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 93%] Built target demo_unassigned_or_unused_tutorial_file_io_solution1 make -f demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_iterator_demo.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_iterator_demo.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_iterator_demo.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_iterator_demo.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_iterator_demo.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 93%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_iterator_demo.dir/unassigned_or_unused/tutorial_sequence/sequence_iterator_demo.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_iterator_demo.dir/unassigned_or_unused/tutorial_sequence/sequence_iterator_demo.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_iterator_demo.dir/unassigned_or_unused/tutorial_sequence/sequence_iterator_demo.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_iterator_demo.dir/unassigned_or_unused/tutorial_sequence/sequence_iterator_demo.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/tutorial_sequence/sequence_iterator_demo.cpp /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_filter_sam.dir/link.d CMakeFiles/demo_unassigned_or_unused_filter_sam.dir/unassigned_or_unused/filter_sam.cpp.o -o ../bin/demo_unassigned_or_unused_filter_sam -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 93%] Built target demo_unassigned_or_unused_filter_sam make -f demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_example1.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_example1.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_example1.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_example1.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_example1.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 93%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_example1.dir/unassigned_or_unused/tutorials_custim_io/example1.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_example1.dir/unassigned_or_unused/tutorials_custim_io/example1.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_example1.dir/unassigned_or_unused/tutorials_custim_io/example1.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_example1.dir/unassigned_or_unused/tutorials_custim_io/example1.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/tutorials_custim_io/example1.cpp [ 93%] Linking CXX executable ../bin/demo_unassigned_or_unused_tutorial_sequence_count_generic_characters cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_generic_characters.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_generic_characters.dir/link.d CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_count_generic_characters.dir/unassigned_or_unused/tutorial_sequence/count_generic_characters.cpp.o -o ../bin/demo_unassigned_or_unused_tutorial_sequence_count_generic_characters -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 93%] Built target demo_unassigned_or_unused_tutorial_sequence_count_generic_characters make -f demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_blastn.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_blastn.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_blastn.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_blastn.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_blastn.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 93%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_blastn.dir/unassigned_or_unused/tutorials_custim_io/parse_blastn.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_blastn.dir/unassigned_or_unused/tutorials_custim_io/parse_blastn.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_blastn.dir/unassigned_or_unused/tutorials_custim_io/parse_blastn.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_blastn.dir/unassigned_or_unused/tutorials_custim_io/parse_blastn.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/tutorials_custim_io/parse_blastn.cpp [ 93%] Linking CXX executable ../bin/demo_unassigned_or_unused_tutorial_sequence_replace_as cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_replace_as.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_replace_as.dir/link.d CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_replace_as.dir/unassigned_or_unused/tutorial_sequence/replace_as.cpp.o -o ../bin/demo_unassigned_or_unused_tutorial_sequence_replace_as -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 93%] Built target demo_unassigned_or_unused_tutorial_sequence_replace_as make -f demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_gff2.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_gff2.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_gff2.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_gff2.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_gff2.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 93%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_gff2.dir/unassigned_or_unused/tutorials_custim_io/parse_gff2.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_gff2.dir/unassigned_or_unused/tutorials_custim_io/parse_gff2.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_gff2.dir/unassigned_or_unused/tutorials_custim_io/parse_gff2.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_gff2.dir/unassigned_or_unused/tutorials_custim_io/parse_gff2.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/tutorials_custim_io/parse_gff2.cpp [ 93%] Linking CXX executable ../bin/demo_unassigned_or_unused_soft_to_hard_masking cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_soft_to_hard_masking.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_soft_to_hard_masking.dir/link.d CMakeFiles/demo_unassigned_or_unused_soft_to_hard_masking.dir/unassigned_or_unused/soft_to_hard_masking.cpp.o -o ../bin/demo_unassigned_or_unused_soft_to_hard_masking -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 93%] Built target demo_unassigned_or_unused_soft_to_hard_masking make -f demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_reader_demo.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_reader_demo.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_reader_demo.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_reader_demo.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_reader_demo.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 93%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_reader_demo.dir/unassigned_or_unused/tutorials_custim_io/reader_demo.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_reader_demo.dir/unassigned_or_unused/tutorials_custim_io/reader_demo.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_reader_demo.dir/unassigned_or_unused/tutorials_custim_io/reader_demo.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_reader_demo.dir/unassigned_or_unused/tutorials_custim_io/reader_demo.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/tutorials_custim_io/reader_demo.cpp [ 94%] Linking CXX executable ../bin/demo_unassigned_or_unused_tutorial_sequence_sequence_all_strings cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_all_strings.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_all_strings.dir/link.d CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_all_strings.dir/unassigned_or_unused/tutorial_sequence/sequence_all_strings.cpp.o -o ../bin/demo_unassigned_or_unused_tutorial_sequence_sequence_all_strings -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 94%] Built target demo_unassigned_or_unused_tutorial_sequence_sequence_all_strings make -f demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution1.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution1.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution1.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution1.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution1.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 94%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution1.dir/unassigned_or_unused/tutorials_custim_io/solution1.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution1.dir/unassigned_or_unused/tutorials_custim_io/solution1.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution1.dir/unassigned_or_unused/tutorials_custim_io/solution1.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution1.dir/unassigned_or_unused/tutorials_custim_io/solution1.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/tutorials_custim_io/solution1.cpp [ 94%] Linking CXX executable ../bin/demo_unassigned_or_unused_tutorial_sequence_sequence_iterator_demo cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_iterator_demo.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_iterator_demo.dir/link.d CMakeFiles/demo_unassigned_or_unused_tutorial_sequence_sequence_iterator_demo.dir/unassigned_or_unused/tutorial_sequence/sequence_iterator_demo.cpp.o -o ../bin/demo_unassigned_or_unused_tutorial_sequence_sequence_iterator_demo -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 94%] Built target demo_unassigned_or_unused_tutorial_sequence_sequence_iterator_demo make -f demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution2.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution2.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution2.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution2.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution2.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 94%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution2.dir/unassigned_or_unused/tutorials_custim_io/solution2.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution2.dir/unassigned_or_unused/tutorials_custim_io/solution2.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution2.dir/unassigned_or_unused/tutorials_custim_io/solution2.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution2.dir/unassigned_or_unused/tutorials_custim_io/solution2.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/tutorials_custim_io/solution2.cpp [ 94%] Linking CXX executable ../bin/demo_unassigned_or_unused_tutorials_custim_io_example1 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_example1.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_example1.dir/link.d CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_example1.dir/unassigned_or_unused/tutorials_custim_io/example1.cpp.o -o ../bin/demo_unassigned_or_unused_tutorials_custim_io_example1 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 94%] Built target demo_unassigned_or_unused_tutorials_custim_io_example1 make -f demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution3.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution3.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution3.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution3.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution3.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 94%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution3.dir/unassigned_or_unused/tutorials_custim_io/solution3.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution3.dir/unassigned_or_unused/tutorials_custim_io/solution3.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution3.dir/unassigned_or_unused/tutorials_custim_io/solution3.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution3.dir/unassigned_or_unused/tutorials_custim_io/solution3.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/tutorials_custim_io/solution3.cpp [ 94%] Linking CXX executable ../bin/demo_unassigned_or_unused_tutorials_custim_io_reader_demo cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_reader_demo.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_reader_demo.dir/link.d CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_reader_demo.dir/unassigned_or_unused/tutorials_custim_io/reader_demo.cpp.o -o ../bin/demo_unassigned_or_unused_tutorials_custim_io_reader_demo -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 94%] Built target demo_unassigned_or_unused_tutorials_custim_io_reader_demo make -f demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution4.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution4.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution4.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution4.dir/build.make demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution4.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 94%] Linking CXX executable ../bin/demo_unassigned_or_unused_tutorials_custim_io_parse_blastn cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_blastn.dir/link.txt --verbose=1 [ 94%] Building CXX object demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution4.dir/unassigned_or_unused/tutorials_custim_io/solution4.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/c++ -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -fopenmp -MD -MT demos/CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution4.dir/unassigned_or_unused/tutorials_custim_io/solution4.cpp.o -MF CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution4.dir/unassigned_or_unused/tutorials_custim_io/solution4.cpp.o.d -o CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution4.dir/unassigned_or_unused/tutorials_custim_io/solution4.cpp.o -c /build/reproducible-path/seqan2-2.5.2/demos/unassigned_or_unused/tutorials_custim_io/solution4.cpp /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_blastn.dir/link.d CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_blastn.dir/unassigned_or_unused/tutorials_custim_io/parse_blastn.cpp.o -o ../bin/demo_unassigned_or_unused_tutorials_custim_io_parse_blastn -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 94%] Built target demo_unassigned_or_unused_tutorials_custim_io_parse_blastn make -f apps/alf/CMakeFiles/alf.dir/build.make apps/alf/CMakeFiles/alf.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/alf /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/alf /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/alf/CMakeFiles/alf.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/alf/CMakeFiles/alf.dir/build.make apps/alf/CMakeFiles/alf.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 95%] Linking CXX executable ../bin/demo_unassigned_or_unused_tutorials_custim_io_solution1 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution1.dir/link.txt --verbose=1 [ 95%] Building CXX object apps/alf/CMakeFiles/alf.dir/alf.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/alf && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.1.14\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fopenmp -MD -MT apps/alf/CMakeFiles/alf.dir/alf.cpp.o -MF CMakeFiles/alf.dir/alf.cpp.o.d -o CMakeFiles/alf.dir/alf.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/alf/alf.cpp [ 95%] Linking CXX executable ../bin/demo_unassigned_or_unused_tutorials_custim_io_solution2 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution2.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution1.dir/link.d CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution1.dir/unassigned_or_unused/tutorials_custim_io/solution1.cpp.o -o ../bin/demo_unassigned_or_unused_tutorials_custim_io_solution1 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. [ 95%] Built target demo_unassigned_or_unused_tutorials_custim_io_solution1 make -f apps/bs_tools/CMakeFiles/bisar.dir/build.make apps/bs_tools/CMakeFiles/bisar.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/bs_tools /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/bs_tools /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/bs_tools/CMakeFiles/bisar.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/bs_tools/CMakeFiles/bisar.dir/build.make apps/bs_tools/CMakeFiles/bisar.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 95%] Building CXX object apps/bs_tools/CMakeFiles/bisar.dir/bisar.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/bs_tools && /usr/bin/c++ -DSEQAN_APP_VERSION=\"0.1.14\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fopenmp -MD -MT apps/bs_tools/CMakeFiles/bisar.dir/bisar.cpp.o -MF CMakeFiles/bisar.dir/bisar.cpp.o.d -o CMakeFiles/bisar.dir/bisar.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/bs_tools/bisar.cpp /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution2.dir/link.d CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution2.dir/unassigned_or_unused/tutorials_custim_io/solution2.cpp.o -o ../bin/demo_unassigned_or_unused_tutorials_custim_io_solution2 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 95%] Built target demo_unassigned_or_unused_tutorials_custim_io_solution2 make -f apps/bs_tools/CMakeFiles/casbar.dir/build.make apps/bs_tools/CMakeFiles/casbar.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/bs_tools /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/bs_tools /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/bs_tools/CMakeFiles/casbar.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/bs_tools/CMakeFiles/casbar.dir/build.make apps/bs_tools/CMakeFiles/casbar.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 95%] Building CXX object apps/bs_tools/CMakeFiles/casbar.dir/casbar.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/bs_tools && /usr/bin/c++ -DSEQAN_APP_VERSION=\"0.1.14\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fopenmp -MD -MT apps/bs_tools/CMakeFiles/casbar.dir/casbar.cpp.o -MF CMakeFiles/casbar.dir/casbar.cpp.o.d -o CMakeFiles/casbar.dir/casbar.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/bs_tools/casbar.cpp [ 95%] Linking CXX executable ../bin/demo_unassigned_or_unused_tutorials_custim_io_solution3 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution3.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution3.dir/link.d CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution3.dir/unassigned_or_unused/tutorials_custim_io/solution3.cpp.o -o ../bin/demo_unassigned_or_unused_tutorials_custim_io_solution3 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 95%] Built target demo_unassigned_or_unused_tutorials_custim_io_solution3 make -f apps/bs_tools/CMakeFiles/four2three.dir/build.make apps/bs_tools/CMakeFiles/four2three.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/bs_tools /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/bs_tools /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/bs_tools/CMakeFiles/four2three.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/bs_tools/CMakeFiles/four2three.dir/build.make apps/bs_tools/CMakeFiles/four2three.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 96%] Building CXX object apps/bs_tools/CMakeFiles/four2three.dir/four2three.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/bs_tools && /usr/bin/c++ -DSEQAN_APP_VERSION=\"0.1.14\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fopenmp -MD -MT apps/bs_tools/CMakeFiles/four2three.dir/four2three.cpp.o -MF CMakeFiles/four2three.dir/four2three.cpp.o.d -o CMakeFiles/four2three.dir/four2three.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/bs_tools/four2three.cpp [ 96%] Linking CXX executable ../bin/demo_unassigned_or_unused_tutorials_custim_io_parse_gff2 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_gff2.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_gff2.dir/link.d CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_parse_gff2.dir/unassigned_or_unused/tutorials_custim_io/parse_gff2.cpp.o -o ../bin/demo_unassigned_or_unused_tutorials_custim_io_parse_gff2 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 96%] Built target demo_unassigned_or_unused_tutorials_custim_io_parse_gff2 make -f apps/dfi/CMakeFiles/dfi.dir/build.make apps/dfi/CMakeFiles/dfi.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/dfi /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/dfi /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/dfi/CMakeFiles/dfi.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/dfi/CMakeFiles/dfi.dir/build.make apps/dfi/CMakeFiles/dfi.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 96%] Building CXX object apps/dfi/CMakeFiles/dfi.dir/dfi.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/dfi && /usr/bin/c++ -DSEQAN_APP_VERSION=\"2.1.14\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fopenmp -MD -MT apps/dfi/CMakeFiles/dfi.dir/dfi.cpp.o -MF CMakeFiles/dfi.dir/dfi.cpp.o.d -o CMakeFiles/dfi.dir/dfi.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/dfi/dfi.cpp [ 96%] Linking CXX executable ../bin/demo_unassigned_or_unused_tutorials_custim_io_solution4 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution4.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution4.dir/link.d CMakeFiles/demo_unassigned_or_unused_tutorials_custim_io_solution4.dir/unassigned_or_unused/tutorials_custim_io/solution4.cpp.o -o ../bin/demo_unassigned_or_unused_tutorials_custim_io_solution4 -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 96%] Built target demo_unassigned_or_unused_tutorials_custim_io_solution4 make -f apps/fiona/CMakeFiles/compute_gain.dir/build.make apps/fiona/CMakeFiles/compute_gain.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/fiona /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/fiona /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/fiona/CMakeFiles/compute_gain.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/fiona/CMakeFiles/compute_gain.dir/build.make apps/fiona/CMakeFiles/compute_gain.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 96%] Building CXX object apps/fiona/CMakeFiles/compute_gain.dir/compute_gain.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/fiona && /usr/bin/c++ -DSEQAN_APP_VERSION=\"0.2.14\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fopenmp -MD -MT apps/fiona/CMakeFiles/compute_gain.dir/compute_gain.cpp.o -MF CMakeFiles/compute_gain.dir/compute_gain.cpp.o.d -o CMakeFiles/compute_gain.dir/compute_gain.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/fiona/compute_gain.cpp [ 96%] Linking CXX executable ../bin/demo_unassigned_or_unused_sam2svg cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_sam2svg.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_sam2svg.dir/link.d CMakeFiles/demo_unassigned_or_unused_sam2svg.dir/unassigned_or_unused/sam2svg.cpp.o -o ../bin/demo_unassigned_or_unused_sam2svg -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 96%] Built target demo_unassigned_or_unused_sam2svg make -f apps/fiona/CMakeFiles/fiona.dir/build.make apps/fiona/CMakeFiles/fiona.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/fiona /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/fiona /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/fiona/CMakeFiles/fiona.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/fiona/CMakeFiles/fiona.dir/build.make apps/fiona/CMakeFiles/fiona.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 96%] Building CXX object apps/fiona/CMakeFiles/fiona.dir/fiona.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/fiona && /usr/bin/c++ -DSEQAN_APP_VERSION=\"0.2.14\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -std=gnu++17 -fopenmp -MD -MT apps/fiona/CMakeFiles/fiona.dir/fiona.cpp.o -MF CMakeFiles/fiona.dir/fiona.cpp.o.d -o CMakeFiles/fiona.dir/fiona.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/fiona/fiona.cpp In file included from /usr/include/boost/math/distributions.hpp:18, from /build/reproducible-path/seqan2-2.5.2/apps/fiona/fiona.cpp:133: /usr/include/boost/math/distributions/binomial.hpp: In instantiation of ‘const std::pair<_FIter, _FIter> boost::math::support(const binomial_distribution&) [with RealType = double; Policy = policies::policy]’: /usr/include/boost/math/distributions/detail/inv_discrete_quantile.hpp:95:52: required from ‘typename Dist::value_type boost::math::detail::do_inverse_discrete_quantile(const Dist&, const typename Dist::value_type&, bool, typename Dist::value_type, const typename Dist::value_type&, typename Dist::value_type, const Tolerance&, uintmax_t&) [with Dist = boost::math::binomial_distribution<>; Tolerance = boost::math::tools::equal_floor; typename Dist::value_type = double; uintmax_t = long unsigned int]’ 95 | boost::math::tie(min_bound, max_bound) = support(dist); | ~~~~~~~^~~~~~ /usr/include/boost/math/distributions/detail/inv_discrete_quantile.hpp:416:63: required from ‘typename Dist::value_type boost::math::detail::inverse_discrete_quantile(const Dist&, const typename Dist::value_type&, bool, const typename Dist::value_type&, const typename Dist::value_type&, const typename Dist::value_type&, const boost::math::policies::discrete_quantile&, uintmax_t&) [with Dist = boost::math::binomial_distribution<>; typename Dist::value_type = double; uintmax_t = long unsigned int]’ 416 | return round_to_floor(dist, do_inverse_discrete_quantile( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 417 | dist, | ~~~~~ 418 | p, | ~~ 419 | c, | ~~ 420 | (guess < 1 ? value_type(1) : (value_type)floor(guess)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 | multiplier, | ~~~~~~~~~~~ 422 | adder, | ~~~~~~ 423 | tools::equal_floor(), | ~~~~~~~~~~~~~~~~~~~~~ 424 | max_iter), p, c); | ~~~~~~~~~ /usr/include/boost/math/distributions/binomial.hpp:261:49: required from ‘RealType boost::math::binomial_detail::quantile_imp(const boost::math::binomial_distribution&, const RealType&, const RealType&, bool) [with RealType = double; Policy = boost::math::policies::policy]’ 261 | return detail::inverse_discrete_quantile( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 262 | dist, | ~~~~~ 263 | comp ? q : p, | ~~~~~~~~~~~~~ 264 | comp, | ~~~~~ 265 | guess, | ~~~~~~ 266 | factor, | ~~~~~~~ 267 | RealType(1), | ~~~~~~~~~~~~ 268 | discrete_quantile_type(), | ~~~~~~~~~~~~~~~~~~~~~~~~~ 269 | max_iter); | ~~~~~~~~~ /usr/include/boost/math/distributions/binomial.hpp:654:46: required from ‘RealType boost::math::quantile(const binomial_distribution&, const RealType&) [with RealType = double; Policy = policies::policy]’ 654 | return binomial_detail::quantile_imp(dist, p, RealType(1-p), false); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/math/distributions/detail/derived_accessors.hpp:136:19: required from ‘typename Distribution::value_type boost::math::quantile(const Distribution&, const RealType&) [with Distribution = binomial_distribution<>; RealType = float; typename Distribution::value_type = double]’ 136 | return quantile(dist, static_cast(x)); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/seqan2-2.5.2/apps/fiona/fiona.cpp:3456:67: required from ‘void traverseAndSearchCorrections(TTreeIterator, TFragmentStore&, seqan2::String&, seqan2::String&, FionaOptions&, seqan2::Tag, unsigned int, FionaResources&) [with int LOOP_LEVEL = -1; TTreeIterator = seqan2::Iter, seqan2::Alloc<> >, seqan2::Owner<> >, seqan2::IndexSa<> >, seqan2::VSTree > > >; TFragmentStore = seqan2::FragmentStore; TCorrections = CorrectionIndelPos; TValueId = unsigned int; TAlgorithm = FionaPoisson_]’ 3456 | unsigned maxAcceptedMismatches = _max((unsigned) ceil(quantile(Nmismatch, pNeig)), 2u); //unlikely that 2 reads share the same error (weese:) don't understand the comment | ~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/seqan2-2.5.2/apps/fiona/fiona.cpp:4897:41: required from ‘unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan2::Tag) [with TFragmentStore = seqan2::FragmentStore; TAlgorithm = FionaPoisson_]’ 4897 | traverseAndSearchCorrections<-1>(myConstrainedIterator, store, correctionList, firstCorrectionForRead, options, alg, maxReadLength, resources); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/seqan2-2.5.2/apps/fiona/fiona.cpp:5537:44: required from here 5537 | numCorrected = correctReads(store, options, FionaPoisson()); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/math/distributions/binomial.hpp:428:43: note: parameter passing for argument of type ‘std::pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 428 | const std::pair support(const binomial_distribution& dist) | ^~~~~~~ In file included from /usr/include/boost/math/distributions/beta.hpp:29, from /usr/include/boost/math/distributions.hpp:17: /usr/include/boost/math/special_functions/beta.hpp: In instantiation of ‘boost::math::detail::ibeta_fraction2_t::result_type boost::math::detail::ibeta_fraction2_t::operator()() [with T = long double; result_type = std::pair]’: /usr/include/boost/math/tools/fraction.hpp:123:20: required from ‘typename boost::math::tools::detail::fraction_traits::result_type boost::math::tools::continued_fraction_b(Gen&, const U&, uintmax_t&) [with Gen = boost::math::detail::ibeta_fraction2_t; U = long double; typename detail::fraction_traits::result_type = long double; uintmax_t = long unsigned int]’ 123 | value_type v = g(); | ~^~ /usr/include/boost/math/tools/fraction.hpp:156:31: required from ‘typename boost::math::tools::detail::fraction_traits::result_type boost::math::tools::continued_fraction_b(Gen&, const U&) [with Gen = boost::math::detail::ibeta_fraction2_t; U = long double; typename detail::fraction_traits::result_type = long double]’ 156 | return continued_fraction_b(g, factor, max_terms); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/math/special_functions/beta.hpp:732:54: required from ‘T boost::math::detail::ibeta_fraction2(T, T, T, T, const Policy&, bool, T*) [with T = long double; Policy = boost::math::policies::policy, boost::math::policies::promote_double, boost::math::policies::default_policy, boost::math::policies::default_policy, boost::math::policies::default_policy, boost::math::policies::default_policy, boost::math::policies::default_policy, boost::math::policies::default_policy, boost::math::policies::default_policy, boost::math::policies::default_policy, boost::math::policies::default_policy>]’ 732 | T fract = boost::math::tools::continued_fraction_b(f, boost::math::policies::get_epsilon()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/math/special_functions/beta.hpp:1377:36: required from ‘T boost::math::detail::ibeta_imp(T, T, T, const Policy&, bool, bool, T*) [with T = long double; Policy = boost::math::policies::policy, boost::math::policies::promote_double, boost::math::policies::default_policy, boost::math::policies::default_policy, boost::math::policies::default_policy, boost::math::policies::default_policy, boost::math::policies::default_policy, boost::math::policies::default_policy, boost::math::policies::default_policy, boost::math::policies::default_policy, boost::math::policies::default_policy>]’ 1377 | fract = ibeta_fraction2(a, b, x, y, pol, normalised, p_derivative); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/math/special_functions/beta.hpp:1414:20: required from ‘T boost::math::detail::ibeta_imp(T, T, T, const Policy&, bool, bool) [with T = long double; Policy = boost::math::policies::policy, boost::math::policies::promote_double, boost::math::policies::default_policy, boost::math::policies::default_policy, boost::math::policies::default_policy, boost::math::policies::default_policy, boost::math::policies::default_policy, boost::math::policies::default_policy, boost::math::policies::default_policy, boost::math::policies::default_policy, boost::math::policies::default_policy>]’ 1414 | return ibeta_imp(a, b, x, pol, inv, normalised, static_cast(nullptr)); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/math/special_functions/beta.hpp:1570:93: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/include/boost/math/distributions/binomial.hpp:261:49: required from ‘RealType boost::math::binomial_detail::quantile_imp(const boost::math::binomial_distribution&, const RealType&, const RealType&, bool) [with RealType = double; Policy = boost::math::policies::policy]’ 261 | return detail::inverse_discrete_quantile( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 262 | dist, | ~~~~~ 263 | comp ? q : p, | ~~~~~~~~~~~~~ 264 | comp, | ~~~~~ 265 | guess, | ~~~~~~ 266 | factor, | ~~~~~~~ 267 | RealType(1), | ~~~~~~~~~~~~ 268 | discrete_quantile_type(), | ~~~~~~~~~~~~~~~~~~~~~~~~~ 269 | max_iter); | ~~~~~~~~~ /usr/include/boost/math/distributions/binomial.hpp:654:46: required from ‘RealType boost::math::quantile(const binomial_distribution&, const RealType&) [with RealType = double; Policy = policies::policy]’ 654 | return binomial_detail::quantile_imp(dist, p, RealType(1-p), false); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/math/distributions/detail/derived_accessors.hpp:136:19: required from ‘typename Distribution::value_type boost::math::quantile(const Distribution&, const RealType&) [with Distribution = binomial_distribution<>; RealType = float; typename Distribution::value_type = double]’ 136 | return quantile(dist, static_cast(x)); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/seqan2-2.5.2/apps/fiona/fiona.cpp:3456:67: required from ‘void traverseAndSearchCorrections(TTreeIterator, TFragmentStore&, seqan2::String&, seqan2::String&, FionaOptions&, seqan2::Tag, unsigned int, FionaResources&) [with int LOOP_LEVEL = -1; TTreeIterator = seqan2::Iter, seqan2::Alloc<> >, seqan2::Owner<> >, seqan2::IndexSa<> >, seqan2::VSTree > > >; TFragmentStore = seqan2::FragmentStore; TCorrections = CorrectionIndelPos; TValueId = unsigned int; TAlgorithm = FionaPoisson_]’ 3456 | unsigned maxAcceptedMismatches = _max((unsigned) ceil(quantile(Nmismatch, pNeig)), 2u); //unlikely that 2 reads share the same error (weese:) don't understand the comment | ~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/seqan2-2.5.2/apps/fiona/fiona.cpp:4897:41: required from ‘unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan2::Tag) [with TFragmentStore = seqan2::FragmentStore; TAlgorithm = FionaPoisson_]’ 4897 | traverseAndSearchCorrections<-1>(myConstrainedIterator, store, correctionList, firstCorrectionForRead, options, alg, maxReadLength, resources); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/seqan2-2.5.2/apps/fiona/fiona.cpp:5537:44: required from here 5537 | numCorrected = correctReads(store, options, FionaPoisson()); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/math/special_functions/beta.hpp:695:16: note: parameter passing for argument of type ‘std::pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 695 | result_type operator()() | ^~~~~~~~ In file included from /usr/include/boost/math/distributions/binomial.hpp:86: /usr/include/boost/math/distributions/detail/inv_discrete_quantile.hpp: In function ‘typename Dist::value_type boost::math::detail::do_inverse_discrete_quantile(const Dist&, const typename Dist::value_type&, bool, typename Dist::value_type, const typename Dist::value_type&, typename Dist::value_type, const Tolerance&, uintmax_t&) [with Dist = boost::math::binomial_distribution<>; Tolerance = boost::math::tools::equal_floor]’: /usr/include/boost/math/distributions/detail/inv_discrete_quantile.hpp:95:52: note: parameter passing for argument of type ‘std::pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 95 | boost::math::tie(min_bound, max_bound) = support(dist); | ~~~~~~~^~~~~~ In file included from /usr/include/boost/math/special_functions/gamma.hpp:18, from /usr/include/boost/math/special_functions/beta.hpp:15: /usr/include/boost/math/tools/fraction.hpp: In function ‘typename boost::math::tools::detail::fraction_traits::result_type boost::math::tools::continued_fraction_a(Gen&, const U&, uintmax_t&) [with Gen = boost::math::detail::upper_incomplete_gamma_fract; U = long double]’: /usr/include/boost/math/tools/fraction.hpp:217:15: note: parameter passing for argument of type ‘std::pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 217 | value_type v = g(); | ^ In file included from /usr/include/boost/math/special_functions/detail/bernoulli_details.hpp:11, from /usr/include/boost/math/special_functions/bernoulli.hpp:16, from /usr/include/boost/math/special_functions/gamma.hpp:35: /usr/include/boost/math/tools/toms748_solve.hpp: In function ‘std::pair<_ForwardIterator, _ForwardIterator> boost::math::tools::toms748_solve(F, const T&, const T&, const T&, const T&, Tol, uintmax_t&, const Policy&) [with F = boost::math::detail::distribution_quantile_finder >; T = double; Tol = equal_floor; Policy = boost::math::policies::policy]’: /usr/include/boost/math/tools/toms748_solve.hpp:296:17: note: parameter passing for argument of type ‘std::pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 296 | std::pair toms748_solve(F f, const T& ax, const T& bx, const T& fax, const T& fbx, Tol tol, std::uintmax_t& max_iter, const Policy& pol) | ^~~~~~~~~~~~~ [ 96%] Linking CXX executable ../bin/demo_unassigned_or_unused_segmentalignment cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos && /usr/bin/cmake -E cmake_link_script CMakeFiles/demo_unassigned_or_unused_segmentalignment.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-parameter -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/demo_unassigned_or_unused_segmentalignment.dir/link.d CMakeFiles/demo_unassigned_or_unused_segmentalignment.dir/unassigned_or_unused/segmentalignment.cpp.o -o ../bin/demo_unassigned_or_unused_segmentalignment -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 96%] Built target demo_unassigned_or_unused_segmentalignment make -f apps/fiona/CMakeFiles/fiona_illumina.dir/build.make apps/fiona/CMakeFiles/fiona_illumina.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/fiona /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/fiona /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/fiona/CMakeFiles/fiona_illumina.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/fiona/CMakeFiles/fiona_illumina.dir/build.make apps/fiona/CMakeFiles/fiona_illumina.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 96%] Building CXX object apps/fiona/CMakeFiles/fiona_illumina.dir/fiona.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/fiona && /usr/bin/c++ -DFIONA_ILLUMINA -DSEQAN_APP_VERSION=\"0.2.14\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -std=gnu++17 -fopenmp -MD -MT apps/fiona/CMakeFiles/fiona_illumina.dir/fiona.cpp.o -MF CMakeFiles/fiona_illumina.dir/fiona.cpp.o.d -o CMakeFiles/fiona_illumina.dir/fiona.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/fiona/fiona.cpp /usr/include/boost/math/tools/fraction.hpp: In function ‘typename boost::math::tools::detail::fraction_traits::result_type boost::math::tools::continued_fraction_a(Gen&, const U&, uintmax_t&) [with Gen = boost::math::detail::upper_incomplete_gamma_fract; U = long double]’: /usr/include/boost/math/tools/fraction.hpp:217:20: note: parameter passing for argument of type ‘std::pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 217 | value_type v = g(); | ~^~ /usr/include/boost/math/distributions/detail/inv_discrete_quantile.hpp: In function ‘typename Dist::value_type boost::math::detail::do_inverse_discrete_quantile(const Dist&, const typename Dist::value_type&, bool, typename Dist::value_type, const typename Dist::value_type&, typename Dist::value_type, const Tolerance&, uintmax_t&) [with Dist = boost::math::binomial_distribution<>; Tolerance = boost::math::tools::equal_floor]’: /usr/include/boost/math/distributions/detail/inv_discrete_quantile.hpp:95:52: note: parameter passing for argument of type ‘std::pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 95 | boost::math::tie(min_bound, max_bound) = support(dist); | ~~~~~~~^~~~~~ [ 96%] Linking CXX executable ../../bin/four2three cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/bs_tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/four2three.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/four2three.dir/link.d CMakeFiles/four2three.dir/four2three.cpp.o -o ../../bin/four2three -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 96%] Built target four2three make -f apps/fx_tools/CMakeFiles/fx_bam_coverage.dir/build.make apps/fx_tools/CMakeFiles/fx_bam_coverage.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/fx_tools /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/fx_tools /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/fx_tools/CMakeFiles/fx_bam_coverage.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/fx_tools/CMakeFiles/fx_bam_coverage.dir/build.make apps/fx_tools/CMakeFiles/fx_bam_coverage.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 96%] Building CXX object apps/fx_tools/CMakeFiles/fx_bam_coverage.dir/fx_bam_coverage.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/fx_tools && /usr/bin/c++ -DSEQAN_APP_VERSION=\"0.2.14\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fopenmp -MD -MT apps/fx_tools/CMakeFiles/fx_bam_coverage.dir/fx_bam_coverage.cpp.o -MF CMakeFiles/fx_bam_coverage.dir/fx_bam_coverage.cpp.o.d -o CMakeFiles/fx_bam_coverage.dir/fx_bam_coverage.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/fx_tools/fx_bam_coverage.cpp In file included from /usr/include/boost/math/distributions.hpp:18, from /build/reproducible-path/seqan2-2.5.2/apps/fiona/fiona.cpp:133: /usr/include/boost/math/distributions/binomial.hpp: In instantiation of ‘const std::pair<_FIter, _FIter> boost::math::support(const binomial_distribution&) [with RealType = double; Policy = policies::policy]’: /usr/include/boost/math/distributions/detail/inv_discrete_quantile.hpp:95:52: required from ‘typename Dist::value_type boost::math::detail::do_inverse_discrete_quantile(const Dist&, const typename Dist::value_type&, bool, typename Dist::value_type, const typename Dist::value_type&, typename Dist::value_type, const Tolerance&, uintmax_t&) [with Dist = boost::math::binomial_distribution<>; Tolerance = boost::math::tools::equal_floor; typename Dist::value_type = double; uintmax_t = long unsigned int]’ 95 | boost::math::tie(min_bound, max_bound) = support(dist); | ~~~~~~~^~~~~~ /usr/include/boost/math/distributions/detail/inv_discrete_quantile.hpp:416:63: required from ‘typename Dist::value_type boost::math::detail::inverse_discrete_quantile(const Dist&, const typename Dist::value_type&, bool, const typename Dist::value_type&, const typename Dist::value_type&, const typename Dist::value_type&, const boost::math::policies::discrete_quantile&, uintmax_t&) [with Dist = boost::math::binomial_distribution<>; typename Dist::value_type = double; uintmax_t = long unsigned int]’ 416 | return round_to_floor(dist, do_inverse_discrete_quantile( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 417 | dist, | ~~~~~ 418 | p, | ~~ 419 | c, | ~~ 420 | (guess < 1 ? value_type(1) : (value_type)floor(guess)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 | multiplier, | ~~~~~~~~~~~ 422 | adder, | ~~~~~~ 423 | tools::equal_floor(), | ~~~~~~~~~~~~~~~~~~~~~ 424 | max_iter), p, c); | ~~~~~~~~~ /usr/include/boost/math/distributions/binomial.hpp:261:49: required from ‘RealType boost::math::binomial_detail::quantile_imp(const boost::math::binomial_distribution&, const RealType&, const RealType&, bool) [with RealType = double; Policy = boost::math::policies::policy]’ 261 | return detail::inverse_discrete_quantile( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 262 | dist, | ~~~~~ 263 | comp ? q : p, | ~~~~~~~~~~~~~ 264 | comp, | ~~~~~ 265 | guess, | ~~~~~~ 266 | factor, | ~~~~~~~ 267 | RealType(1), | ~~~~~~~~~~~~ 268 | discrete_quantile_type(), | ~~~~~~~~~~~~~~~~~~~~~~~~~ 269 | max_iter); | ~~~~~~~~~ /usr/include/boost/math/distributions/binomial.hpp:654:46: required from ‘RealType boost::math::quantile(const binomial_distribution&, const RealType&) [with RealType = double; Policy = policies::policy]’ 654 | return binomial_detail::quantile_imp(dist, p, RealType(1-p), false); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/math/distributions/detail/derived_accessors.hpp:136:19: required from ‘typename Distribution::value_type boost::math::quantile(const Distribution&, const RealType&) [with Distribution = binomial_distribution<>; RealType = float; typename Distribution::value_type = double]’ 136 | return quantile(dist, static_cast(x)); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/seqan2-2.5.2/apps/fiona/fiona.cpp:3456:67: required from ‘void traverseAndSearchCorrections(TTreeIterator, TFragmentStore&, seqan2::String&, seqan2::String&, FionaOptions&, seqan2::Tag, unsigned int, FionaResources&) [with int LOOP_LEVEL = -1; TTreeIterator = seqan2::Iter, seqan2::Alloc<> >, seqan2::Owner<> >, seqan2::IndexSa<> >, seqan2::VSTree > > >; TFragmentStore = seqan2::FragmentStore; TCorrections = CorrectionIndelPos; TValueId = unsigned int; TAlgorithm = FionaPoisson_]’ 3456 | unsigned maxAcceptedMismatches = _max((unsigned) ceil(quantile(Nmismatch, pNeig)), 2u); //unlikely that 2 reads share the same error (weese:) don't understand the comment | ~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/seqan2-2.5.2/apps/fiona/fiona.cpp:4897:41: required from ‘unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan2::Tag) [with TFragmentStore = seqan2::FragmentStore; TAlgorithm = FionaPoisson_]’ 4897 | traverseAndSearchCorrections<-1>(myConstrainedIterator, store, correctionList, firstCorrectionForRead, options, alg, maxReadLength, resources); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/seqan2-2.5.2/apps/fiona/fiona.cpp:5537:44: required from here 5537 | numCorrected = correctReads(store, options, FionaPoisson()); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/math/distributions/binomial.hpp:428:43: note: parameter passing for argument of type ‘std::pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 428 | const std::pair support(const binomial_distribution& dist) | ^~~~~~~ [ 96%] Linking CXX executable ../../bin/alf cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/alf && /usr/bin/cmake -E cmake_link_script CMakeFiles/alf.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/alf.dir/link.d CMakeFiles/alf.dir/alf.cpp.o -o ../../bin/alf -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 96%] Built target alf make -f apps/fx_tools/CMakeFiles/fx_fastq_stats.dir/build.make apps/fx_tools/CMakeFiles/fx_fastq_stats.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/fx_tools /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/fx_tools /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/fx_tools/CMakeFiles/fx_fastq_stats.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/fx_tools/CMakeFiles/fx_fastq_stats.dir/build.make apps/fx_tools/CMakeFiles/fx_fastq_stats.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 96%] Building CXX object apps/fx_tools/CMakeFiles/fx_fastq_stats.dir/fx_fastq_stats.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/fx_tools && /usr/bin/c++ -DSEQAN_APP_VERSION=\"0.2.14\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fopenmp -MD -MT apps/fx_tools/CMakeFiles/fx_fastq_stats.dir/fx_fastq_stats.cpp.o -MF CMakeFiles/fx_fastq_stats.dir/fx_fastq_stats.cpp.o.d -o CMakeFiles/fx_fastq_stats.dir/fx_fastq_stats.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/fx_tools/fx_fastq_stats.cpp In file included from /usr/include/boost/math/distributions/beta.hpp:29, from /usr/include/boost/math/distributions.hpp:17: /usr/include/boost/math/special_functions/beta.hpp: In instantiation of ‘boost::math::detail::ibeta_fraction2_t::result_type boost::math::detail::ibeta_fraction2_t::operator()() [with T = long double; result_type = std::pair]’: /usr/include/boost/math/tools/fraction.hpp:123:20: required from ‘typename boost::math::tools::detail::fraction_traits::result_type boost::math::tools::continued_fraction_b(Gen&, const U&, uintmax_t&) [with Gen = boost::math::detail::ibeta_fraction2_t; U = long double; typename detail::fraction_traits::result_type = long double; uintmax_t = long unsigned int]’ 123 | value_type v = g(); | ~^~ /usr/include/boost/math/tools/fraction.hpp:156:31: required from ‘typename boost::math::tools::detail::fraction_traits::result_type boost::math::tools::continued_fraction_b(Gen&, const U&) [with Gen = boost::math::detail::ibeta_fraction2_t; U = long double; typename detail::fraction_traits::result_type = long double]’ 156 | return continued_fraction_b(g, factor, max_terms); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/math/special_functions/beta.hpp:732:54: required from ‘T boost::math::detail::ibeta_fraction2(T, T, T, T, const Policy&, bool, T*) [with T = long double; Policy = boost::math::policies::policy, boost::math::policies::promote_double, boost::math::policies::default_policy, boost::math::policies::default_policy, boost::math::policies::default_policy, boost::math::policies::default_policy, boost::math::policies::default_policy, boost::math::policies::default_policy, boost::math::policies::default_policy, boost::math::policies::default_policy, boost::math::policies::default_policy>]’ 732 | T fract = boost::math::tools::continued_fraction_b(f, boost::math::policies::get_epsilon()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/math/special_functions/beta.hpp:1377:36: required from ‘T boost::math::detail::ibeta_imp(T, T, T, const Policy&, bool, bool, T*) [with T = long double; Policy = boost::math::policies::policy, boost::math::policies::promote_double, boost::math::policies::default_policy, boost::math::policies::default_policy, boost::math::policies::default_policy, boost::math::policies::default_policy, boost::math::policies::default_policy, boost::math::policies::default_policy, boost::math::policies::default_policy, boost::math::policies::default_policy, boost::math::policies::default_policy>]’ 1377 | fract = ibeta_fraction2(a, b, x, y, pol, normalised, p_derivative); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/math/special_functions/beta.hpp:1414:20: required from ‘T boost::math::detail::ibeta_imp(T, T, T, const Policy&, bool, bool) [with T = long double; Policy = boost::math::policies::policy, boost::math::policies::promote_double, boost::math::policies::default_policy, boost::math::policies::default_policy, boost::math::policies::default_policy, boost::math::policies::default_policy, boost::math::policies::default_policy, boost::math::policies::default_policy, boost::math::policies::default_policy, boost::math::policies::default_policy, boost::math::policies::default_policy>]’ 1414 | return ibeta_imp(a, b, x, pol, inv, normalised, static_cast(nullptr)); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/math/special_functions/beta.hpp:1570:93: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/include/boost/math/distributions/binomial.hpp:261:49: required from ‘RealType boost::math::binomial_detail::quantile_imp(const boost::math::binomial_distribution&, const RealType&, const RealType&, bool) [with RealType = double; Policy = boost::math::policies::policy]’ 261 | return detail::inverse_discrete_quantile( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 262 | dist, | ~~~~~ 263 | comp ? q : p, | ~~~~~~~~~~~~~ 264 | comp, | ~~~~~ 265 | guess, | ~~~~~~ 266 | factor, | ~~~~~~~ 267 | RealType(1), | ~~~~~~~~~~~~ 268 | discrete_quantile_type(), | ~~~~~~~~~~~~~~~~~~~~~~~~~ 269 | max_iter); | ~~~~~~~~~ /usr/include/boost/math/distributions/binomial.hpp:654:46: required from ‘RealType boost::math::quantile(const binomial_distribution&, const RealType&) [with RealType = double; Policy = policies::policy]’ 654 | return binomial_detail::quantile_imp(dist, p, RealType(1-p), false); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/math/distributions/detail/derived_accessors.hpp:136:19: required from ‘typename Distribution::value_type boost::math::quantile(const Distribution&, const RealType&) [with Distribution = binomial_distribution<>; RealType = float; typename Distribution::value_type = double]’ 136 | return quantile(dist, static_cast(x)); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/seqan2-2.5.2/apps/fiona/fiona.cpp:3456:67: required from ‘void traverseAndSearchCorrections(TTreeIterator, TFragmentStore&, seqan2::String&, seqan2::String&, FionaOptions&, seqan2::Tag, unsigned int, FionaResources&) [with int LOOP_LEVEL = -1; TTreeIterator = seqan2::Iter, seqan2::Alloc<> >, seqan2::Owner<> >, seqan2::IndexSa<> >, seqan2::VSTree > > >; TFragmentStore = seqan2::FragmentStore; TCorrections = CorrectionIndelPos; TValueId = unsigned int; TAlgorithm = FionaPoisson_]’ 3456 | unsigned maxAcceptedMismatches = _max((unsigned) ceil(quantile(Nmismatch, pNeig)), 2u); //unlikely that 2 reads share the same error (weese:) don't understand the comment | ~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/seqan2-2.5.2/apps/fiona/fiona.cpp:4897:41: required from ‘unsigned int correctReads(TFragmentStore&, FionaOptions&, seqan2::Tag) [with TFragmentStore = seqan2::FragmentStore; TAlgorithm = FionaPoisson_]’ 4897 | traverseAndSearchCorrections<-1>(myConstrainedIterator, store, correctionList, firstCorrectionForRead, options, alg, maxReadLength, resources); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/seqan2-2.5.2/apps/fiona/fiona.cpp:5537:44: required from here 5537 | numCorrected = correctReads(store, options, FionaPoisson()); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/math/special_functions/beta.hpp:695:16: note: parameter passing for argument of type ‘std::pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 695 | result_type operator()() | ^~~~~~~~ In file included from /usr/include/boost/math/distributions/binomial.hpp:86: /usr/include/boost/math/distributions/detail/inv_discrete_quantile.hpp: In function ‘typename Dist::value_type boost::math::detail::do_inverse_discrete_quantile(const Dist&, const typename Dist::value_type&, bool, typename Dist::value_type, const typename Dist::value_type&, typename Dist::value_type, const Tolerance&, uintmax_t&) [with Dist = boost::math::binomial_distribution<>; Tolerance = boost::math::tools::equal_floor]’: /usr/include/boost/math/distributions/detail/inv_discrete_quantile.hpp:95:52: note: parameter passing for argument of type ‘std::pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 95 | boost::math::tie(min_bound, max_bound) = support(dist); | ~~~~~~~^~~~~~ In file included from /usr/include/boost/math/special_functions/gamma.hpp:18, from /usr/include/boost/math/special_functions/beta.hpp:15: /usr/include/boost/math/tools/fraction.hpp: In function ‘typename boost::math::tools::detail::fraction_traits::result_type boost::math::tools::continued_fraction_a(Gen&, const U&, uintmax_t&) [with Gen = boost::math::detail::upper_incomplete_gamma_fract; U = long double]’: /usr/include/boost/math/tools/fraction.hpp:217:15: note: parameter passing for argument of type ‘std::pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 217 | value_type v = g(); | ^ In file included from /usr/include/boost/math/special_functions/detail/bernoulli_details.hpp:11, from /usr/include/boost/math/special_functions/bernoulli.hpp:16, from /usr/include/boost/math/special_functions/gamma.hpp:35: /usr/include/boost/math/tools/toms748_solve.hpp: In function ‘std::pair<_ForwardIterator, _ForwardIterator> boost::math::tools::toms748_solve(F, const T&, const T&, const T&, const T&, Tol, uintmax_t&, const Policy&) [with F = boost::math::detail::distribution_quantile_finder >; T = double; Tol = equal_floor; Policy = boost::math::policies::policy]’: /usr/include/boost/math/tools/toms748_solve.hpp:296:17: note: parameter passing for argument of type ‘std::pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 296 | std::pair toms748_solve(F f, const T& ax, const T& bx, const T& fax, const T& fbx, Tol tol, std::uintmax_t& max_iter, const Policy& pol) | ^~~~~~~~~~~~~ [ 96%] Linking CXX executable ../../bin/compute_gain cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/fiona && /usr/bin/cmake -E cmake_link_script CMakeFiles/compute_gain.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/compute_gain.dir/link.d CMakeFiles/compute_gain.dir/compute_gain.cpp.o -o ../../bin/compute_gain -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 96%] Built target compute_gain make -f apps/gustaf/CMakeFiles/gustaf.dir/build.make apps/gustaf/CMakeFiles/gustaf.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/gustaf /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/gustaf /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/gustaf/CMakeFiles/gustaf.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/gustaf/CMakeFiles/gustaf.dir/build.make apps/gustaf/CMakeFiles/gustaf.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 96%] Building CXX object apps/gustaf/CMakeFiles/gustaf.dir/gustaf.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/gustaf && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.0.14\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fopenmp -MD -MT apps/gustaf/CMakeFiles/gustaf.dir/gustaf.cpp.o -MF CMakeFiles/gustaf.dir/gustaf.cpp.o.d -o CMakeFiles/gustaf.dir/gustaf.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/gustaf/gustaf.cpp /usr/include/boost/math/tools/fraction.hpp: In function ‘typename boost::math::tools::detail::fraction_traits::result_type boost::math::tools::continued_fraction_a(Gen&, const U&, uintmax_t&) [with Gen = boost::math::detail::upper_incomplete_gamma_fract; U = long double]’: /usr/include/boost/math/tools/fraction.hpp:217:20: note: parameter passing for argument of type ‘std::pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 217 | value_type v = g(); | ~^~ /usr/include/boost/math/distributions/detail/inv_discrete_quantile.hpp: In function ‘typename Dist::value_type boost::math::detail::do_inverse_discrete_quantile(const Dist&, const typename Dist::value_type&, bool, typename Dist::value_type, const typename Dist::value_type&, typename Dist::value_type, const Tolerance&, uintmax_t&) [with Dist = boost::math::binomial_distribution<>; Tolerance = boost::math::tools::equal_floor]’: /usr/include/boost/math/distributions/detail/inv_discrete_quantile.hpp:95:52: note: parameter passing for argument of type ‘std::pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 95 | boost::math::tie(min_bound, max_bound) = support(dist); | ~~~~~~~^~~~~~ [ 96%] Linking CXX executable ../../bin/dfi cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/dfi && /usr/bin/cmake -E cmake_link_script CMakeFiles/dfi.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/dfi.dir/link.d CMakeFiles/dfi.dir/dfi.cpp.o -o ../../bin/dfi -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 96%] Built target dfi make -f apps/gustaf/CMakeFiles/gustaf_mate_joining.dir/build.make apps/gustaf/CMakeFiles/gustaf_mate_joining.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/gustaf /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/gustaf /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/gustaf/CMakeFiles/gustaf_mate_joining.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/gustaf/CMakeFiles/gustaf_mate_joining.dir/build.make apps/gustaf/CMakeFiles/gustaf_mate_joining.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 96%] Building CXX object apps/gustaf/CMakeFiles/gustaf_mate_joining.dir/join_mates.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/gustaf && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.0.14\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fopenmp -MD -MT apps/gustaf/CMakeFiles/gustaf_mate_joining.dir/join_mates.cpp.o -MF CMakeFiles/gustaf_mate_joining.dir/join_mates.cpp.o.d -o CMakeFiles/gustaf_mate_joining.dir/join_mates.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/gustaf/join_mates.cpp [ 96%] Linking CXX executable ../../bin/fx_bam_coverage cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/fx_tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/fx_bam_coverage.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/fx_bam_coverage.dir/link.d CMakeFiles/fx_bam_coverage.dir/fx_bam_coverage.cpp.o -o ../../bin/fx_bam_coverage -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 96%] Built target fx_bam_coverage make -f apps/insegt/CMakeFiles/insegt.dir/build.make apps/insegt/CMakeFiles/insegt.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/insegt /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/insegt /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/insegt/CMakeFiles/insegt.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/insegt/CMakeFiles/insegt.dir/build.make apps/insegt/CMakeFiles/insegt.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 96%] Building CXX object apps/insegt/CMakeFiles/insegt.dir/insegt.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/insegt && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.1.14\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fopenmp -MD -MT apps/insegt/CMakeFiles/insegt.dir/insegt.cpp.o -MF CMakeFiles/insegt.dir/insegt.cpp.o.d -o CMakeFiles/insegt.dir/insegt.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/insegt/insegt.cpp [ 96%] Linking CXX executable ../../bin/bisar cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/bs_tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/bisar.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/bisar.dir/link.d CMakeFiles/bisar.dir/bisar.cpp.o -o ../../bin/bisar -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 96%] Built target bisar make -f apps/mason2/CMakeFiles/mason_genome.dir/build.make apps/mason2/CMakeFiles/mason_genome.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/mason2 /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/mason2 /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/mason2/CMakeFiles/mason_genome.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/mason2/CMakeFiles/mason_genome.dir/build.make apps/mason2/CMakeFiles/mason_genome.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 96%] Building CXX object apps/mason2/CMakeFiles/mason_genome.dir/mason_genome.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/mason2 && /usr/bin/c++ -DSEQAN_APP_VERSION=\"2.0.13\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT apps/mason2/CMakeFiles/mason_genome.dir/mason_genome.cpp.o -MF CMakeFiles/mason_genome.dir/mason_genome.cpp.o.d -o CMakeFiles/mason_genome.dir/mason_genome.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/mason2/mason_genome.cpp [ 96%] Linking CXX executable ../../bin/fx_fastq_stats cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/fx_tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/fx_fastq_stats.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/fx_fastq_stats.dir/link.d CMakeFiles/fx_fastq_stats.dir/fx_fastq_stats.cpp.o -o ../../bin/fx_fastq_stats -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 96%] Built target fx_fastq_stats make -f apps/mason2/CMakeFiles/mason_methylation.dir/build.make apps/mason2/CMakeFiles/mason_methylation.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/mason2 /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/mason2 /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/mason2/CMakeFiles/mason_methylation.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/mason2/CMakeFiles/mason_methylation.dir/build.make apps/mason2/CMakeFiles/mason_methylation.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 96%] Building CXX object apps/mason2/CMakeFiles/mason_methylation.dir/mason_methylation.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/mason2 && /usr/bin/c++ -DSEQAN_APP_VERSION=\"2.0.13\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT apps/mason2/CMakeFiles/mason_methylation.dir/mason_methylation.cpp.o -MF CMakeFiles/mason_methylation.dir/mason_methylation.cpp.o.d -o CMakeFiles/mason_methylation.dir/mason_methylation.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/mason2/mason_methylation.cpp [ 96%] Linking CXX executable ../../bin/casbar cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/bs_tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/casbar.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/casbar.dir/link.d CMakeFiles/casbar.dir/casbar.cpp.o -o ../../bin/casbar -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 96%] Built target casbar make -f apps/mason2/CMakeFiles/mason_frag_sequencing.dir/build.make apps/mason2/CMakeFiles/mason_frag_sequencing.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/mason2 /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/mason2 /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/mason2/CMakeFiles/mason_frag_sequencing.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/mason2/CMakeFiles/mason_frag_sequencing.dir/build.make apps/mason2/CMakeFiles/mason_frag_sequencing.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 97%] Building CXX object apps/mason2/CMakeFiles/mason_frag_sequencing.dir/mason_frag_sequencing.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/mason2 && /usr/bin/c++ -DSEQAN_APP_VERSION=\"2.0.13\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT apps/mason2/CMakeFiles/mason_frag_sequencing.dir/mason_frag_sequencing.cpp.o -MF CMakeFiles/mason_frag_sequencing.dir/mason_frag_sequencing.cpp.o.d -o CMakeFiles/mason_frag_sequencing.dir/mason_frag_sequencing.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/mason2/mason_frag_sequencing.cpp [ 97%] Linking CXX executable ../../bin/gustaf_mate_joining cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/gustaf && /usr/bin/cmake -E cmake_link_script CMakeFiles/gustaf_mate_joining.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/gustaf_mate_joining.dir/link.d CMakeFiles/gustaf_mate_joining.dir/join_mates.cpp.o -o ../../bin/gustaf_mate_joining -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 97%] Built target gustaf_mate_joining make -f apps/mason2/CMakeFiles/mason_variator.dir/build.make apps/mason2/CMakeFiles/mason_variator.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/mason2 /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/mason2 /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/mason2/CMakeFiles/mason_variator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/mason2/CMakeFiles/mason_variator.dir/build.make apps/mason2/CMakeFiles/mason_variator.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 98%] Building CXX object apps/mason2/CMakeFiles/mason_variator.dir/mason_variator.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/mason2 && /usr/bin/c++ -DSEQAN_APP_VERSION=\"2.0.13\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT apps/mason2/CMakeFiles/mason_variator.dir/mason_variator.cpp.o -MF CMakeFiles/mason_variator.dir/mason_variator.cpp.o.d -o CMakeFiles/mason_variator.dir/mason_variator.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/mason2/mason_variator.cpp [ 98%] Linking CXX executable ../../bin/mason_genome cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/mason2 && /usr/bin/cmake -E cmake_link_script CMakeFiles/mason_genome.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/mason_genome.dir/link.d CMakeFiles/mason_genome.dir/mason_genome.cpp.o -o ../../bin/mason_genome libmason_sim.a -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 98%] Built target mason_genome make -f apps/mason2/CMakeFiles/mason_materializer.dir/build.make apps/mason2/CMakeFiles/mason_materializer.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/mason2 /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/mason2 /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/mason2/CMakeFiles/mason_materializer.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/mason2/CMakeFiles/mason_materializer.dir/build.make apps/mason2/CMakeFiles/mason_materializer.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 98%] Building CXX object apps/mason2/CMakeFiles/mason_materializer.dir/mason_materializer.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/mason2 && /usr/bin/c++ -DSEQAN_APP_VERSION=\"2.0.13\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT apps/mason2/CMakeFiles/mason_materializer.dir/mason_materializer.cpp.o -MF CMakeFiles/mason_materializer.dir/mason_materializer.cpp.o.d -o CMakeFiles/mason_materializer.dir/mason_materializer.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/mason2/mason_materializer.cpp [ 98%] Linking CXX executable ../../bin/mason_methylation cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/mason2 && /usr/bin/cmake -E cmake_link_script CMakeFiles/mason_methylation.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/mason_methylation.dir/link.d CMakeFiles/mason_methylation.dir/mason_methylation.cpp.o -o ../../bin/mason_methylation libmason_sim.a -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 98%] Built target mason_methylation make -f apps/mason2/CMakeFiles/mason_simulator.dir/build.make apps/mason2/CMakeFiles/mason_simulator.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/mason2 /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/mason2 /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/mason2/CMakeFiles/mason_simulator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/mason2/CMakeFiles/mason_simulator.dir/build.make apps/mason2/CMakeFiles/mason_simulator.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 98%] Building CXX object apps/mason2/CMakeFiles/mason_simulator.dir/mason_simulator.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/mason2 && /usr/bin/c++ -DSEQAN_APP_VERSION=\"2.0.13\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT apps/mason2/CMakeFiles/mason_simulator.dir/mason_simulator.cpp.o -MF CMakeFiles/mason_simulator.dir/mason_simulator.cpp.o.d -o CMakeFiles/mason_simulator.dir/mason_simulator.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/mason2/mason_simulator.cpp [ 98%] Linking CXX executable ../../bin/insegt cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/insegt && /usr/bin/cmake -E cmake_link_script CMakeFiles/insegt.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. [ 98%] Linking CXX executable ../../bin/mason_frag_sequencing cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/mason2 && /usr/bin/cmake -E cmake_link_script CMakeFiles/mason_frag_sequencing.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/insegt.dir/link.d CMakeFiles/insegt.dir/insegt.cpp.o -o ../../bin/insegt -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 98%] Built target insegt make -f apps/mason2/CMakeFiles/mason_splicing.dir/build.make apps/mason2/CMakeFiles/mason_splicing.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/mason2 /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/mason2 /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/mason2/CMakeFiles/mason_splicing.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/mason2/CMakeFiles/mason_splicing.dir/build.make apps/mason2/CMakeFiles/mason_splicing.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 98%] Building CXX object apps/mason2/CMakeFiles/mason_splicing.dir/mason_splicing.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/mason2 && /usr/bin/c++ -DSEQAN_APP_VERSION=\"2.0.13\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT apps/mason2/CMakeFiles/mason_splicing.dir/mason_splicing.cpp.o -MF CMakeFiles/mason_splicing.dir/mason_splicing.cpp.o.d -o CMakeFiles/mason_splicing.dir/mason_splicing.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/mason2/mason_splicing.cpp /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/mason_frag_sequencing.dir/link.d CMakeFiles/mason_frag_sequencing.dir/mason_frag_sequencing.cpp.o -o ../../bin/mason_frag_sequencing libmason_sim.a -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 98%] Built target mason_frag_sequencing make -f apps/mason2/CMakeFiles/mason_tests.dir/build.make apps/mason2/CMakeFiles/mason_tests.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/mason2 /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/mason2 /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/mason2/CMakeFiles/mason_tests.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/mason2/CMakeFiles/mason_tests.dir/build.make apps/mason2/CMakeFiles/mason_tests.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 98%] Building CXX object apps/mason2/CMakeFiles/mason_tests.dir/mason_tests.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/mason2 && /usr/bin/c++ -DSEQAN_APP_VERSION=\"2.0.13\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -MD -MT apps/mason2/CMakeFiles/mason_tests.dir/mason_tests.cpp.o -MF CMakeFiles/mason_tests.dir/mason_tests.cpp.o.d -o CMakeFiles/mason_tests.dir/mason_tests.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/mason2/mason_tests.cpp [ 98%] Linking CXX executable ../../bin/fiona cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/fiona && /usr/bin/cmake -E cmake_link_script CMakeFiles/fiona.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/fiona.dir/link.d CMakeFiles/fiona.dir/fiona.cpp.o -o ../../bin/fiona -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 98%] Built target fiona make -f apps/micro_razers/CMakeFiles/micro_razers.dir/build.make apps/micro_razers/CMakeFiles/micro_razers.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/micro_razers /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/micro_razers /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/micro_razers/CMakeFiles/micro_razers.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/micro_razers/CMakeFiles/micro_razers.dir/build.make apps/micro_razers/CMakeFiles/micro_razers.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 98%] Building CXX object apps/micro_razers/CMakeFiles/micro_razers.dir/micro_razers.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/micro_razers && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.0.15\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fopenmp -MD -MT apps/micro_razers/CMakeFiles/micro_razers.dir/micro_razers.cpp.o -MF CMakeFiles/micro_razers.dir/micro_razers.cpp.o.d -o CMakeFiles/micro_razers.dir/micro_razers.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/micro_razers/micro_razers.cpp [ 98%] Linking CXX executable ../../bin/mason_materializer cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/mason2 && /usr/bin/cmake -E cmake_link_script CMakeFiles/mason_materializer.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/mason_materializer.dir/link.d CMakeFiles/mason_materializer.dir/mason_materializer.cpp.o -o ../../bin/mason_materializer libmason_sim.a -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 98%] Built target mason_materializer [ 98%] Building CXX object apps/micro_razers/CMakeFiles/micro_razers.dir/__/razers/param_tabs.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/micro_razers && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.0.15\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fopenmp -MD -MT apps/micro_razers/CMakeFiles/micro_razers.dir/__/razers/param_tabs.cpp.o -MF CMakeFiles/micro_razers.dir/__/razers/param_tabs.cpp.o.d -o CMakeFiles/micro_razers.dir/__/razers/param_tabs.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/razers/param_tabs.cpp make -f apps/ngs_roi/CMakeFiles/roi_plot_thumbnails.dir/build.make apps/ngs_roi/CMakeFiles/roi_plot_thumbnails.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/ngs_roi /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/ngs_roi/CMakeFiles/roi_plot_thumbnails.dir/DependInfo.cmake "--color=" [ 98%] Linking CXX executable ../../bin/gustaf cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/gustaf && /usr/bin/cmake -E cmake_link_script CMakeFiles/gustaf.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/ngs_roi/CMakeFiles/roi_plot_thumbnails.dir/build.make apps/ngs_roi/CMakeFiles/roi_plot_thumbnails.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 98%] Building CXX object apps/ngs_roi/CMakeFiles/roi_plot_thumbnails.dir/roi_plot_thumbnails.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/ngs_roi && /usr/bin/c++ -DSEQAN_APP_VERSION=\"0.2.16\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fopenmp -MD -MT apps/ngs_roi/CMakeFiles/roi_plot_thumbnails.dir/roi_plot_thumbnails.cpp.o -MF CMakeFiles/roi_plot_thumbnails.dir/roi_plot_thumbnails.cpp.o.d -o CMakeFiles/roi_plot_thumbnails.dir/roi_plot_thumbnails.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/roi_plot_thumbnails.cpp /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/gustaf.dir/link.d CMakeFiles/gustaf.dir/gustaf.cpp.o -o ../../bin/gustaf -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 98%] Built target gustaf make -f apps/ngs_roi/CMakeFiles/bam2roi.dir/build.make apps/ngs_roi/CMakeFiles/bam2roi.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/ngs_roi /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/ngs_roi/CMakeFiles/bam2roi.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/ngs_roi/CMakeFiles/bam2roi.dir/build.make apps/ngs_roi/CMakeFiles/bam2roi.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 98%] Building CXX object apps/ngs_roi/CMakeFiles/bam2roi.dir/bam2roi.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/ngs_roi && /usr/bin/c++ -DSEQAN_APP_VERSION=\"0.2.16\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fopenmp -MD -MT apps/ngs_roi/CMakeFiles/bam2roi.dir/bam2roi.cpp.o -MF CMakeFiles/bam2roi.dir/bam2roi.cpp.o.d -o CMakeFiles/bam2roi.dir/bam2roi.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/bam2roi.cpp [ 98%] Linking CXX executable ../../bin/mason_tests cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/mason2 && /usr/bin/cmake -E cmake_link_script CMakeFiles/mason_tests.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/mason_tests.dir/link.d CMakeFiles/mason_tests.dir/mason_tests.cpp.o -o ../../bin/mason_tests libmason_sim.a -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 98%] Built target mason_tests [ 98%] Building CXX object apps/ngs_roi/CMakeFiles/bam2roi.dir/roi_builder.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/ngs_roi && /usr/bin/c++ -DSEQAN_APP_VERSION=\"0.2.16\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fopenmp -MD -MT apps/ngs_roi/CMakeFiles/bam2roi.dir/roi_builder.cpp.o -MF CMakeFiles/bam2roi.dir/roi_builder.cpp.o.d -o CMakeFiles/bam2roi.dir/roi_builder.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/roi_builder.cpp [ 98%] Linking CXX executable ../../bin/mason_variator cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/mason2 && /usr/bin/cmake -E cmake_link_script CMakeFiles/mason_variator.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/mason_variator.dir/link.d CMakeFiles/mason_variator.dir/mason_variator.cpp.o -o ../../bin/mason_variator libmason_sim.a -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 98%] Built target mason_variator make -f apps/ngs_roi/CMakeFiles/roi_feature_projection.dir/build.make apps/ngs_roi/CMakeFiles/roi_feature_projection.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/ngs_roi /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/ngs_roi/CMakeFiles/roi_feature_projection.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/ngs_roi/CMakeFiles/roi_feature_projection.dir/build.make apps/ngs_roi/CMakeFiles/roi_feature_projection.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 98%] Building CXX object apps/ngs_roi/CMakeFiles/roi_feature_projection.dir/roi_feature_projection.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/ngs_roi && /usr/bin/c++ -DSEQAN_APP_VERSION=\"0.2.16\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fopenmp -MD -MT apps/ngs_roi/CMakeFiles/roi_feature_projection.dir/roi_feature_projection.cpp.o -MF CMakeFiles/roi_feature_projection.dir/roi_feature_projection.cpp.o.d -o CMakeFiles/roi_feature_projection.dir/roi_feature_projection.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/roi_feature_projection.cpp [ 98%] Linking CXX executable ../../bin/fiona_illumina cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/fiona && /usr/bin/cmake -E cmake_link_script CMakeFiles/fiona_illumina.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/fiona_illumina.dir/link.d CMakeFiles/fiona_illumina.dir/fiona.cpp.o -o ../../bin/fiona_illumina -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 98%] Built target fiona_illumina make -f apps/pair_align/lib/CMakeFiles/pair_align_lib.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_lib.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/pair_align/lib /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib/CMakeFiles/pair_align_lib.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/pair_align/lib/CMakeFiles/pair_align_lib.dir/build.make apps/pair_align/lib/CMakeFiles/pair_align_lib.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [100%] Building CXX object apps/pair_align/lib/CMakeFiles/pair_align_lib.dir/pair_align_lib.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.3.12\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fopenmp -MD -MT apps/pair_align/lib/CMakeFiles/pair_align_lib.dir/pair_align_lib.cpp.o -MF CMakeFiles/pair_align_lib.dir/pair_align_lib.cpp.o.d -o CMakeFiles/pair_align_lib.dir/pair_align_lib.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/pair_align/lib/pair_align_lib.cpp [100%] Building CXX object apps/ngs_roi/CMakeFiles/roi_feature_projection.dir/project_spliced.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/ngs_roi && /usr/bin/c++ -DSEQAN_APP_VERSION=\"0.2.16\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fopenmp -MD -MT apps/ngs_roi/CMakeFiles/roi_feature_projection.dir/project_spliced.cpp.o -MF CMakeFiles/roi_feature_projection.dir/project_spliced.cpp.o.d -o CMakeFiles/roi_feature_projection.dir/project_spliced.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/project_spliced.cpp [100%] Linking CXX static library libpair_align_lib.a cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib && /usr/bin/cmake -P CMakeFiles/pair_align_lib.dir/cmake_clean_target.cmake cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/lib && /usr/bin/cmake -E cmake_link_script CMakeFiles/pair_align_lib.dir/link.txt --verbose=1 [100%] Linking CXX executable ../../bin/mason_simulator cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/mason2 && /usr/bin/cmake -E cmake_link_script CMakeFiles/mason_simulator.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/mason_simulator.dir/link.d CMakeFiles/mason_simulator.dir/mason_simulator.cpp.o -o ../../bin/mason_simulator libmason_sim.a -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [100%] Built target mason_simulator [100%] Building CXX object apps/ngs_roi/CMakeFiles/roi_feature_projection.dir/project_interval.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/ngs_roi && /usr/bin/c++ -DSEQAN_APP_VERSION=\"0.2.16\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fopenmp -MD -MT apps/ngs_roi/CMakeFiles/roi_feature_projection.dir/project_interval.cpp.o -MF CMakeFiles/roi_feature_projection.dir/project_interval.cpp.o.d -o CMakeFiles/roi_feature_projection.dir/project_interval.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/project_interval.cpp /usr/bin/ar qc libpair_align_lib.a CMakeFiles/pair_align_lib.dir/pair_align_lib.cpp.o CMakeFiles/pair_align_lcs.dir/pair_align_lcs.cpp.o CMakeFiles/pair_align_local.dir/pair_align_local.cpp.o CMakeFiles/pair_align_global_0000.dir/pair_align_global.cpp.o CMakeFiles/pair_align_global_0001.dir/pair_align_global.cpp.o CMakeFiles/pair_align_global_0010.dir/pair_align_global.cpp.o CMakeFiles/pair_align_global_0011.dir/pair_align_global.cpp.o CMakeFiles/pair_align_global_0100.dir/pair_align_global.cpp.o CMakeFiles/pair_align_global_0101.dir/pair_align_global.cpp.o CMakeFiles/pair_align_global_0110.dir/pair_align_global.cpp.o CMakeFiles/pair_align_global_0111.dir/pair_align_global.cpp.o CMakeFiles/pair_align_global_1000.dir/pair_align_global.cpp.o CMakeFiles/pair_align_global_1001.dir/pair_align_global.cpp.o CMakeFiles/pair_align_global_1010.dir/pair_align_global.cpp.o CMakeFiles/pair_align_global_1011.dir/pair_align_global.cpp.o CMakeFiles/pair_align_global_1100.dir/pair_align_global.cpp.o CMakeFiles/pair_align_global_1101.dir/pair_align_global.cpp.o CMakeFiles/pair_align_global_1110.dir/pair_align_global.cpp.o CMakeFiles/pair_align_global_1111.dir/pair_align_global.cpp.o /usr/bin/ranlib libpair_align_lib.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [100%] Built target pair_align_lib make -f apps/pair_align/CMakeFiles/pair_align.dir/build.make apps/pair_align/CMakeFiles/pair_align.dir/depend make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/pair_align /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align/CMakeFiles/pair_align.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make -f apps/pair_align/CMakeFiles/pair_align.dir/build.make apps/pair_align/CMakeFiles/pair_align.dir/build make[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [100%] Building CXX object apps/pair_align/CMakeFiles/pair_align.dir/pair_align.cpp.o cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align && /usr/bin/c++ -DSEQAN_APP_VERSION=\"1.3.12\" -DSEQAN_DATE=\"\" -DSEQAN_DISABLE_VERSION_CHECK -DSEQAN_GLOBAL_EXCEPTION_HANDLER=1 -DSEQAN_HAS_BZIP2=1 -DSEQAN_HAS_EXECINFO=1 -DSEQAN_HAS_OPENMP=1 -DSEQAN_HAS_ZLIB=1 -DSEQAN_REVISION=\"tarball\" -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -I/build/reproducible-path/seqan2-2.5.2/include -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fopenmp -MD -MT apps/pair_align/CMakeFiles/pair_align.dir/pair_align.cpp.o -MF CMakeFiles/pair_align.dir/pair_align.cpp.o.d -o CMakeFiles/pair_align.dir/pair_align.cpp.o -c /build/reproducible-path/seqan2-2.5.2/apps/pair_align/pair_align.cpp [100%] Linking CXX executable ../../bin/mason_splicing cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/mason2 && /usr/bin/cmake -E cmake_link_script CMakeFiles/mason_splicing.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/mason_splicing.dir/link.d CMakeFiles/mason_splicing.dir/mason_splicing.cpp.o -o ../../bin/mason_splicing libmason_sim.a -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [100%] Built target mason_splicing [100%] Linking CXX executable ../../bin/roi_plot_thumbnails cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/ngs_roi && /usr/bin/cmake -E cmake_link_script CMakeFiles/roi_plot_thumbnails.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/roi_plot_thumbnails.dir/link.d CMakeFiles/roi_plot_thumbnails.dir/roi_plot_thumbnails.cpp.o -o ../../bin/roi_plot_thumbnails -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [100%] Built target roi_plot_thumbnails [100%] Linking CXX executable ../../bin/bam2roi cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/ngs_roi && /usr/bin/cmake -E cmake_link_script CMakeFiles/bam2roi.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/bam2roi.dir/link.d CMakeFiles/bam2roi.dir/bam2roi.cpp.o CMakeFiles/bam2roi.dir/roi_builder.cpp.o -o ../../bin/bam2roi -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [100%] Built target bam2roi [100%] Linking CXX executable ../../bin/roi_feature_projection cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/ngs_roi && /usr/bin/cmake -E cmake_link_script CMakeFiles/roi_feature_projection.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/roi_feature_projection.dir/link.d CMakeFiles/roi_feature_projection.dir/roi_feature_projection.cpp.o CMakeFiles/roi_feature_projection.dir/project_spliced.cpp.o CMakeFiles/roi_feature_projection.dir/project_interval.cpp.o -o ../../bin/roi_feature_projection -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [100%] Built target roi_feature_projection [100%] Linking CXX executable ../../bin/pair_align cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align && /usr/bin/cmake -E cmake_link_script CMakeFiles/pair_align.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/pair_align.dir/link.d CMakeFiles/pair_align.dir/pair_align.cpp.o -o ../../bin/pair_align lib/libpair_align_lib.a -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [100%] Built target pair_align [100%] Linking CXX executable ../../bin/micro_razers cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/micro_razers && /usr/bin/cmake -E cmake_link_script CMakeFiles/micro_razers.dir/link.txt --verbose=1 /usr/lib/aarch64-linux-gnu/libbz2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DNDEBUG -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -ffile-prefix-map=/build/reproducible-path/seqan2-2.5.2=. -Wl,-z,relro -Wl,-z,now -mbranch-protection=standard -Wl,--dependency-file=CMakeFiles/micro_razers.dir/link.d CMakeFiles/micro_razers.dir/micro_razers.cpp.o CMakeFiles/micro_razers.dir/__/razers/param_tabs.cpp.o -o ../../bin/micro_razers -lrt -Wl,--whole-archive -lpthread -Wl,--no-whole-archive /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so /usr/lib/gcc/aarch64-linux-gnu/15/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [100%] Built target micro_razers make[2]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' rm -f debian/seqan-apps.debhelper.log debian/rules execute_before_dh_auto_test make[1]: Entering directory '/build/reproducible-path/seqan2-2.5.2' cp demos/tutorial/file_io_overview/example.sam debian/ make[1]: Leaving directory '/build/reproducible-path/seqan2-2.5.2' dh_auto_test -a cd obj-aarch64-linux-gnu && make -j8 test ARGS\+=--verbose ARGS\+=-j8 make[1]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' Running tests... /usr/bin/ctest --force-new-ctest-process --verbose -j8 UpdateCTestConfiguration from :/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/DartConfiguration.tcl UpdateCTestConfiguration from :/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/DartConfiguration.tcl Test project /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu Constructing a list of tests Done constructing a list of tests Updating test list for fixtures Added 0 tests to meet fixture requirements Checking test dependency graph... Checking test dependency graph end Connected to MAKE jobserver test 1 Start 1: test_test_align 1: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_align 1: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/align 1: Test timeout computed to be: 10000000 test 2 Start 2: test_test_align_extend 2: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_align_extend 2: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/align_extend 2: Test timeout computed to be: 10000000 test 3 Start 3: test_align_parallel_data_structures 3: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_align_parallel_data_structures 3: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/align_parallel 3: Test timeout computed to be: 10000000 test 4 Start 4: test_test_align_parallel_interface 4: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_align_parallel_interface 4: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/align_parallel 4: Test timeout computed to be: 10000000 test 5 Start 5: test_test_align_parallel_algorithm 5: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_align_parallel_algorithm 5: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/align_parallel 5: Test timeout computed to be: 10000000 test 6 Start 6: test_test_align_profile 6: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_align_profile 6: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/align_profile 6: Test timeout computed to be: 10000000 test 7 Start 7: test_test_align_split 7: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_align_split 7: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/align_split 7: Test timeout computed to be: 10000000 test 8 Start 8: test_test_alignment_free 8: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_alignment_free 8: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/alignment_free 8: Test timeout computed to be: 10000000 1: TEST SUITE test_align 1: SEQAN_ENABLE_DEBUG == 1 1: SEQAN_ENABLE_TESTING == 1 1: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 1: SEQAN_ASYNC_IO == 1 1: test_align_gaps_array_gaps_metafunctions OK 1: test_align_gaps_array_constructor_and_source OK 1: test_align_gaps_array_gaps_set_source OK 1: test_align_gaps_array_gaps_assign_source OK 1: test_align_gaps_array_gaps_gap_operations_gaps_center OK 1: test_align_gaps_array_gaps_gap_operations_gaps_leading OK 1: test_align_gaps_array_gaps_gap_operations_gaps_trailing OK 1: test_align_gaps_array_gaps_sequence_interface_ungapped OK 1: test_align_gaps_array_gaps_sequence_interface_gaps_center OK 1: test_align_gaps_array_gaps_sequence_interface_gaps_leading OK 1: test_align_gaps_array_gaps_sequence_interface_gaps_trailing OK 1: test_align_gaps_array_gaps_iterator_interface_begin OK 1: test_align_gaps_array_gaps_iterator_interface_end OK 1: test_align_gaps_array_gaps_iterator_interface_iter OK 1: test_align_gaps_array_gaps_source_view_position_ungapped OK 1: test_align_gaps_array_gaps_source_view_position_gaps_center OK 1: test_align_gaps_array_gaps_source_view_position_gaps_leading OK 1: test_align_gaps_array_gaps_source_view_position_gaps_trailing OK 1: test_align_gaps_array_gaps_clipping_ungapped OK 1: test_align_gaps_array_gaps_clipping_gaps_center OK 1: test_align_gaps_array_gaps_clipping_gaps_leading OK 1: test_align_gaps_array_gaps_clipping_gaps_trailing OK 1: test_align_gaps_array_gaps_clear_clipping OK 1: test_align_gaps_array_gaps_copy_gaps OK 1: test_align_gaps_array_gaps_copy_clipping OK 1: test_align_gaps_array_gaps_source_is_nothing OK 1: test_align_gaps_array_gaps_clear OK 1: test_align_gaps_anchor_gaps_metafunctions OK 1: test_align_gaps_anchor_constructor_and_source OK 1: test_align_gaps_anchor_gaps_set_source OK 1: test_align_gaps_anchor_gaps_assign_source OK 1: test_align_gaps_anchor_gaps_gap_operations_gaps_center OK 1: test_align_gaps_anchor_gaps_gap_operations_gaps_leading OK 1: test_align_gaps_anchor_gaps_gap_operations_gaps_trailing OK 1: test_align_gaps_anchor_gaps_sequence_interface_ungapped OK 1: test_align_gaps_anchor_gaps_sequence_interface_gaps_center OK 1: test_align_gaps_anchor_gaps_sequence_interface_gaps_leading OK 1: test_align_gaps_anchor_gaps_sequence_interface_gaps_trailing OK 1: test_align_gaps_anchor_gaps_iterator_interface_begin OK 1: test_align_gaps_anchor_gaps_iterator_interface_end OK 1: test_align_gaps_anchor_gaps_iterator_interface_iter OK 1: test_align_gaps_anchor_gaps_source_view_position_ungapped OK 1: test_align_gaps_anchor_gaps_source_view_position_gaps_center OK 1: test_align_gaps_anchor_gaps_source_view_position_gaps_leading OK 1: test_align_gaps_anchor_gaps_source_view_position_gaps_trailing OK 1: test_align_gaps_anchor_gaps_clipping_ungapped OK 1: test_align_gaps_anchor_gaps_clipping_gaps_center OK 1: test_align_gaps_anchor_gaps_clipping_gaps_leading OK 1: test_align_gaps_anchor_gaps_clipping_gaps_trailing OK 1: test_align_gaps_anchor_gaps_clear_clipping OK 1: test_align_gaps_anchor_gaps_copy_gaps OK 1: test_align_gaps_anchor_gaps_copy_clipping OK 1: test_align_gaps_anchor_gaps_clear OK 1: test_align_fragment OK 1: test_align_gaps_iterator_array_metafunctions OK 1: test_align_gaps_iterator_array_trivial_iterator_array_functions OK 1: test_align_gaps_iterator_array_rooted_random_access_iterator_array_functions OK 1: test_align_gaps_iterator_array_movement OK 1: test_align_gaps_iterator_array_relations OK 1: test_align_gaps_iterator_array_pointer_arithmetic OK 1: test_align_gaps_iterator_array_forward_iteration OK 1: test_align_gaps_iterator_array_reverse_iteration OK 1: test_align_gaps_iterator_array_count_gaps_count_characters_is_gap OK 1: test_align_gaps_iterator_array_clipped_count_gaps_count_characters_is_gap OK 1: test_align_gaps_iterator_array_gap_operations_center OK 1: test_align_gaps_iterator_array_gap_operations_leading OK 1: test_align_gaps_iterator_array_gap_operations_trailing OK 1: test_align_gaps_iterator_anchor_metafunctions OK 1: test_align_gaps_iterator_anchor_trivial_iterator_anchor_functions OK 1: test_align_gaps_iterator_anchor_rooted_random_access_iterator_anchor_functions OK 1: test_align_gaps_iterator_anchor_movement OK 1: test_align_gaps_iterator_anchor_relations OK 1: test_align_gaps_iterator_anchor_pointer_arithmetic OK 1: test_align_gaps_iterator_anchor_forward_iteration OK 1: test_align_gaps_iterator_anchor_reverse_iteration OK 1: test_align_gaps_iterator_anchor_count_gaps_count_characters_is_gap OK 1: test_align_gaps_iterator_anchor_clipped_count_gaps_count_characters_is_gap OK 1: test_align_gaps_iterator_anchor_gap_operations_center OK 1: test_align_gaps_iterator_anchor_gap_operations_leading OK 1: test_align_gaps_iterator_anchor_gap_operations_trailing OK 1: test_alignment_dp_profile_is_global_alignment OK 1: test_alignment_dp_profile_is_local_alignment OK 1: test_alignment_dp_profile_is_traceback_enabled OK 1: test_alignment_dp_profile_is_free_end_gaps OK 1: test_dp_band_on_constructor OK 1: test_dp_band_on_lower_diagonal OK 1: test_dp_band_on_upper_diagonal OK 1: test_dp_band_on_set_lower_diagonal OK 1: test_dp_band_on_set_upper_diagonal OK 1: test_dp_band_off_band_size OK 1: test_dp_band_on_band_size OK 1: test_dp_cell_value OK 1: test_dp_cell_reference OK 1: test_dp_cell_default_infinity OK 1: test_dp_cell_linear_constructor OK 1: test_dp_cell_linear_copy_constructor OK 1: test_dp_cell_linear_assignment OK 1: test_dp_cell_linear_score OK 1: test_dp_cell_affine_constructor OK 1: test_dp_cell_affine_copy_constructor OK 1: test_dp_cell_affine_assignment OK 1: test_dp_cell_affine_score OK 1: test_dp_cell_affine_vertical_score OK 1: test_dp_cell_affine_horizontal_score OK 1: test_dp_cell_dynamic_constructor OK 1: test_dp_cell_dynamic_copy_constructor OK 1: test_dp_cell_dynamic_assignment OK 1: test_dp_cell_dynamic_score OK 1: test_alignment_dp_matrix_metafunction_data_host OK 1: test_alignment_dp_matrix_metafunction_size_arr OK 1: test_alignment_dp_matrix_data_host OK 1: test_alignment_dp_matrix_data_lengths OK 1: test_alignment_dp_matrix_data_factors OK 1: test_alignment_dp_matrix_check_dimension OK 1: test_alignment_dp_matrix_clear OK 1: test_alignment_dp_matrix_host OK 1: test_alignment_dp_matrix_set_host OK 1: test_alignment_dp_matrix_begin_standard OK 1: test_alignment_dp_matrix_begin_rooted OK 1: test_alignment_dp_matrix_end_standard OK 1: test_alignment_dp_matrix_end_rooted OK 1: test_alignment_dp_matrix_full_constructor OK 1: test_alignment_dp_matrix_full_copy_constructor OK 1: test_alignment_dp_matrix_full_assigment OK 1: test_alignment_dp_matrix_full_metafunction_value OK 1: test_alignment_dp_matrix_full_metafunction_reference OK 1: test_alignment_dp_matrix_full_metafunction_getvalue OK 1: test_alignment_dp_matrix_full_metafunction_position OK 1: test_alignment_dp_matrix_full_metafunction_size OK 1: test_alignment_dp_matrix_full_metafunction_host OK 1: test_alignment_dp_matrix_full_metafunction_iterator_standard OK 1: test_alignment_dp_matrix_full_metafunction_iterator_rooted OK 1: test_alignment_dp_matrix_full_resize OK 1: test_alignment_dp_matrix_full_resize_with_value OK 1: test_alignment_dp_matrix_full_value OK 1: test_alignment_dp_matrix_full_value_with_coordinates OK 1: test_alignment_dp_matrix_full_set_length OK 1: test_alignment_dp_matrix_full_length_dimension OK 1: test_alignment_dp_matrix_full_length OK 1: test_alignment_dp_matrix_full_empty OK 1: test_alignment_dp_matrix_full_coordinate OK 1: test_alignment_dp_matrix_sparse_constructor OK 1: test_alignment_dp_matrix_sparse_copy_constructor OK 1: test_alignment_dp_matrix_sparse_assigment OK 1: test_alignment_dp_matrix_sparse_metafunction_value OK 1: test_alignment_dp_matrix_sparse_metafunction_reference OK 1: test_alignment_dp_matrix_sparse_metafunction_getvalue OK 1: test_alignment_dp_matrix_sparse_metafunction_position OK 1: test_alignment_dp_matrix_sparse_metafunction_size OK 1: test_alignment_dp_matrix_sparse_metafunction_host OK 1: test_alignment_dp_matrix_sparse_metafunction_iterator_standard OK 1: test_alignment_dp_matrix_sparse_metafunction_iterator_rooted OK 1: test_alignment_dp_matrix_sparse_resize OK 1: test_alignment_dp_matrix_sparse_resize_with_value OK 1: test_alignment_dp_matrix_sparse_value OK 1: test_alignment_dp_matrix_sparse_value_with_coordinates OK 1: test_alignment_dp_matrix_sparse_set_length OK 1: test_alignment_dp_matrix_sparse_length_dimension OK 1: test_alignment_dp_matrix_sparse_length OK 1: test_alignment_dp_matrix_sparse_empty OK 1: test_alignment_dp_matrix_sparse_coordinate OK 1: test_alignment_dp_matrix_navigator_score_matrix_full_init_unbanded OK 1: test_alignment_dp_matrix_navigator_score_matrix_full_init_banded OK 1: test_alignment_dp_matrix_navigator_score_matrix_full_go_next_cell OK 1: test_alignment_dp_matrix_navigator_score_matrix_full_assign_value OK 1: test_alignment_dp_matrix_navigator_score_matrix_full_value OK 1: test_alignment_dp_matrix_navigator_score_matrix_full_previous_cell_horizontal OK 1: test_alignment_dp_matrix_navigator_score_matrix_full_coordinate OK 1: test_alignment_dp_matrix_navigator_score_matrix_full_container OK 1: test_alignment_dp_matrix_navigator_score_matrix_sparse_init_unbanded OK 1: test_alignment_dp_matrix_navigator_score_matrix_sparse_init_banded OK 1: test_alignment_dp_matrix_navigator_score_matrix_sparse_go_next OK 1: test_alignment_dp_matrix_navigator_score_matrix_sparse_assign_value OK 1: test_alignment_dp_matrix_navigator_score_matrix_sparse_value OK 1: test_alignment_dp_matrix_navigator_score_matrix_sparse_previous_cell_horizontal OK 1: test_alignment_dp_matrix_navigator_score_matrix_sparse_coordinate OK 1: test_alignment_dp_matrix_navigator_score_matrix_sparse_container OK 1: test_alignment_dp_matrix_navigator_trace_matrix_enabled_init_unbanded OK 1: test_alignment_dp_matrix_navigator_trace_matrix_disabled_init_unbanded OK 1: test_alignment_dp_matrix_navigator_trace_matrix_enabled_init_banded OK 1: test_alignment_dp_matrix_navigator_trace_matrix_disabled_init_banded OK 1: test_alignment_dp_matrix_navigator_trace_matrix_enabled_go_next OK 1: test_alignment_dp_matrix_navigator_trace_matrix_enabled_assign_value OK 1: test_alignment_dp_matrix_navigator_trace_matrix_enabled_value OK 1: test_alignment_dp_matrix_navigator_trace_matrix_enabled_coordinate OK 1: test_alignment_dp_matrix_navigator_trace_matrix_enabled_container OK 1: test_alignment_dp_matrix_navigator_trace_matrix_enabled_to_global_position OK 1: test_dp_formula_trace_global_linear_diagonal_direction OK 1: test_dp_formula_trace_global_linear_horizontal_direction OK 1: test_dp_formula_trace_global_linear_vertical_direction OK 1: test_dp_formula_trace_global_linear_upper_band_direction OK 1: test_dp_formula_trace_global_linear_lower_band_direction OK 1: test_dp_formula_trace_global_linear_all_direction OK 1: test_dp_formula_trace_global_affine_diagonal_direction OK 1: test_dp_formula_trace_global_affine_horizontal_direction OK 1: test_dp_formula_trace_global_affine_vertical_direction OK 1: test_dp_formula_trace_global_affine_upper_band_direction OK 1: test_dp_formula_trace_global_affine_lower_band_direction OK 1: test_dp_formula_trace_global_affine_all_direction OK 1: test_dp_formula_trace_global_dynamic_diagonal_direction OK 1: test_dp_formula_trace_global_dynamic_horizontal_direction OK 1: test_dp_formula_trace_global_dynamic_vertical_direction OK 1: test_dp_formula_trace_global_dynamic_upper_band_direction OK 1: test_dp_formula_trace_global_dynamic_lower_band_direction OK 1: test_dp_formula_trace_global_dynamic_all_direction OK 1: test_dp_formula_trace_local_linear_diagonal_direction OK 1: test_dp_formula_trace_local_linear_horizontal_direction OK 1: test_dp_formula_trace_local_linear_vertical_direction OK 1: test_dp_formula_trace_local_linear_upper_band_direction OK 1: test_dp_formula_trace_local_linear_lower_band_direction OK 1: test_dp_formula_trace_local_linear_all_direction OK 1: test_dp_formula_trace_local_affine_diagonal_direction OK 1: test_dp_formula_trace_local_affine_horizontal_direction OK 1: test_dp_formula_trace_local_affine_vertical_direction OK 1: test_dp_formula_trace_local_affine_upper_band_direction OK 1: test_dp_formula_trace_local_affine_lower_band_direction OK 1: test_dp_formula_trace_local_affine_all_direction OK 1: test_dp_formula_notrace_diagonal_direction OK 1: test_dp_formula_notrace_horizontal_direction OK 1: test_dp_formula_notrace_vertical_direction OK 1: test_dp_formula_notrace_upper_band_direction OK 1: test_dp_formula_notrace_lower_band_direction OK 1: test_dp_formula_notrace_all_direction OK 1: test_alignment_traceback_tracesegment_constructor OK 1: test_alignment_traceback_tracesegment_assignment OK 1: test_alignment_traceback_tracesegment_position OK 1: test_alignment_traceback_tracesegment_size OK 1: test_alignment_traceback_tracesegment_get_begin_horizontal OK 1: test_alignment_traceback_tracesegment_get_begin_vertical OK 1: test_alignment_traceback_tracesegment_get_end_horizontal OK 1: test_alignment_traceback_tracesegment_get_end_vertical OK 1: test_alignment_traceback_tracesegment_translate_trace_value OK 1: test_alignment_traceback_tracesegment_operator_stream OK 1: test_alignment_traceback_tracesegment_operator_equal OK 1: test_alignment_traceback_tracesegment_operator_unequal OK 1: test_alignment_traceback_tracesegment_record_segment OK 1: test_align2_trace_adaptor_trace_segment OK 1: test_align2_trace_adaptor_record_trace_segment OK 1: test_align2_trace_adaptor_adapt_file OK 1: test_align2_trace_adaptor_adapt_align OK 1: test_align2_trace_adaptor_adapt_fragments OK 1: test_align2_trace_adaptor_adapt_alignment_graph OK 1: test_align2_traceback_linear_unbanded_alignment OK 1: test_align2_traceback_linear_normal_banded_alignment OK 1: test_align2_traceback_linear_small_banded_alignment OK 1: test_align2_traceback_linear_wide_banded_alignment OK 1: test_align2_traceback_affine OK 1: test_align2_traceback_gaps_left_linear_gaps OK 1: test_align2_traceback_gaps_right_linear_gaps OK 1: test_align2_traceback_gaps_left_affine_gaps OK 1: test_align2_traceback_gaps_right_affine_gaps OK 1: test_alignment_algorithms_band_position_case1 OK 1: test_alignment_algorithms_band_position_case2 OK 1: test_alignment_algorithms_band_position_case3 OK 1: test_alignment_algorithms_band_position_case4 OK 1: test_alignment_algorithms_band_position_case5 OK 1: test_alignment_algorithms_band_position_case6 OK 1: test_alignment_algorithms_band_position_case7 OK 1: test_alignment_algorithms_band_position_case8 OK 1: test_alignment_algorithms_band_position_case9 OK 1: test_alignment_algorithms_band_position_case10 OK 1: test_alignment_algorithms_band_position_case11 OK 1: test_alignment_algorithms_band_position_case12 OK 1: test_alignment_algorithms_band_position_case13 OK 1: test_alignment_algorithms_band_position_case14 OK 1: test_alignment_algorithms_band_position_case15 OK 1: test_alignment_algorithms_band_position_case16 OK 1: test_alignment_algorithms_band_position_case17 OK 1: test_alignment_algorithms_band_position_case18 OK 1: test_alignment_algorithms_band_position_case19 OK 1: test_alignment_algorithms_band_position_case20 OK 1: test_alignment_algorithms_band_position_case21 OK 1: test_alignment_algorithms_band_position_case22 OK 1: test_alignment_algorithms_band_position_case23 OK 1: test_alignment_algorithms_band_position_case24 OK 1: test_alignment_algorithms_band_position_case25 OK 1: test_alignment_algorithms_band_position_case26 OK 1: test_alignment_algorithms_band_position_case27 OK 1: test_alignment_algorithms_band_position_case28 OK 1: test_alignment_algorithms_band_position_case29 OK 1: test_alignment_algorithms_band_position_case30 OK 1: test_alignment_algorithms_band_position_case31 OK 1: test_alignment_algorithms_align_gaps_global_linear OK 1: test_alignment_algorithms_gaps_gaps_global_linear OK 1: test_alignment_algorithms_graph_gaps_global_linear OK 1: test_alignment_algorithms_fragments_gaps_global_linear OK 1: test_align_global_alignment_shorter_interfaces_linear OK 1: test_alignment_algorithms_score_global_linear OK 1: test_alignment_algorithms_align_gaps_global_affine OK 1: test_alignment_algorithms_gaps_gaps_global_affine OK 1: test_alignment_algorithms_graph_gaps_global_affine OK 1: test_alignment_algorithms_fragments_gaps_global_affine OK 1: test_align_global_alignment_shorter_interfaces_affine OK 1: test_alignment_algorithms_score_global_affine OK 1: test_alignment_algorithms_align_gaps_overlap_linear OK 1: test_alignment_algorithms_gaps_gaps_overlap_linear OK 1: test_alignment_algorithms_graph_gaps_overlap_linear OK 1: test_alignment_algorithms_fragments_gaps_overlap_linear OK 1: test_alignment_algorithms_score_overlap_linear OK 1: test_alignment_algorithms_align_gaps_overlap_affine OK 1: test_alignment_algorithms_gaps_gaps_overlap_affine OK 1: test_alignment_algorithms_graph_gaps_overlap_affine OK 1: test_alignment_algorithms_fragments_gaps_overlap_affine OK 1: test_alignment_algorithms_score_overlap_affine OK 1: test_alignment_algorithms_align_gaps_semi_global_linear OK 1: test_alignment_algorithms_gaps_gaps_semi_global_linear OK 1: test_alignment_algorithms_graph_gaps_semi_global_linear OK 1: test_alignment_algorithms_fragments_gaps_semi_global_linear OK 1: test_alignment_algorithms_score_semi_global_linear OK 1: test_alignment_algorithms_align_gaps_semi_global_affine OK 1: test_alignment_algorithms_gaps_gaps_semi_global_affine OK 1: test_alignment_algorithms_graph_gaps_semi_global_affine OK 1: test_alignment_algorithms_fragments_gaps_semi_global_affine OK 1: test_alignment_algorithms_score_semi_global_affine OK 1: test_alignment_algorithms_global_different_container OK 1: test_alignment_algorithms_fix_floating_point_scores OK 1: test_alignment_algorithms_align_local_linear OK 1: test_alignment_algorithms_gaps_local_linear OK 1: test_alignment_algorithms_graph_local_linear OK 1: test_alignment_algorithms_fragments_local_linear OK 1: test_alignment_algorithms_align_local_affine OK 1: test_alignment_algorithms_gaps_local_affine OK 1: test_alignment_algorithms_graph_local_affine OK 1: test_alignment_algorithms_fragments_local_affine OK 1: test_alignment_algorithms_global_dynamic_cost OK 1: test_alignment_algorithms_local_dynamic_cost OK 1: test_align_local_alignment_enumeration_align OK 1: test_align_local_alignment_enumeration_gaps OK 1: test_align_local_alignment_enumeration_fragment OK 1: test_alignment_algorithms_align_global_linear_banded OK 1: test_alignment_algorithms_gaps_global_linear_banded OK 1: test_alignment_algorithms_graph_global_linear_banded OK 1: test_alignment_algorithms_fragments_global_linear_banded OK 1: test_alignment_algorithms_align_global_affine_banded OK 1: test_alignment_algorithms_gaps_global_affine_banded OK 1: test_alignment_algorithms_graph_global_affine_banded OK 1: test_alignment_algorithms_fragments_global_affine_banded OK 1: test_alignment_algorithms_align_overlap_linear_banded OK 1: test_alignment_algorithms_gaps_overlap_linear_banded OK 1: test_alignment_algorithms_graph_overlap_linear_banded OK 1: test_alignment_algorithms_fragments_overlap_linear_banded OK 1: test_alignment_algorithms_align_overlap_affine_banded OK 1: test_alignment_algorithms_gaps_overlap_affine_banded OK 1: test_alignment_algorithms_graph_overlap_affine_banded OK 1: test_alignment_algorithms_fragments_overlap_affine_banded OK 1: test_alignment_algorithms_align_semi_global_linear_banded OK 1: test_alignment_algorithms_gaps_semi_global_linear_banded OK 1: test_alignment_algorithms_graph_semi_global_linear_banded OK 1: test_alignment_algorithms_fragments_semi_global_linear_banded OK 1: test_alignment_algorithms_align_semi_global_affine_banded OK 1: test_alignment_algorithms_gaps_semi_global_affine_banded OK 1: test_alignment_algorithms_graph_semi_global_affine_banded OK 1: test_alignment_algorithms_fragments_semi_global_affine_banded OK 1: test_align_global_alignment_banded_shorter_interfaces_linear OK 1: test_align_global_alignment_banded_shorter_interfaces_affine OK 1: test_alignment_algorithms_global_banded_different_container OK 1: test_alignment_algorithms_align_local_linear_banded OK 1: test_alignment_algorithms_gaps_local_linear_banded OK 1: test_alignment_algorithms_graph_local_linear_banded OK 1: test_alignment_algorithms_fragments_local_linear_banded OK 1: test_alignment_algorithms_align_local_affine_banded OK 1: test_alignment_algorithms_gaps_local_affine_banded OK 1: test_alignment_algorithms_graph_local_affine_banded OK 1: test_alignment_algorithms_fragments_local_affine_banded OK 1: test_alignment_algorithms_global_dynamic_cost_banded OK 1: test_alignment_algorithms_local_dynamic_cost_banded OK 1: test_align_local_alignment_enumeration_banded_align OK 1: test_align_local_alignment_enumeration_banded_gaps OK 1: test_align_local_alignment_enumeration_banded_fragment OK 1: test_align_global_alignment_hirschberg_align OK 1: test_align_global_alignment_hirschberg_gaps OK 1: test_align_global_alignment_hirschberg_fragments OK 1: test_align_global_alignment_hirschberg_graph OK 1: test_align_global_alignment_myers_hirschberg_align OK 1: test_align_global_alignment_myers_hirschberg_gaps OK 1: test_align_global_alignment_myers_hirschberg_fragments OK 1: test_align_global_alignment_myers_hirschberg_graph OK 1: test_align_global_alignment_score_hirschberg OK 1: test_align_global_alignment_score_myers OK 1: test_align_global_alignment_score_myers_hirschberg OK 1: test_align_global_alignment_hirschberg_single_character OK 1: test_align_integrate_align OK 1: test_align_integrate_align_infix_of_infix OK 1: test_align_stream_gaps_write OK 1: test_align_stream_gaps_stream OK 1: test_align_stream_align_write OK 1: test_align_stream_align_stream OK 1: test_align_compute_alignment_stats OK 1: ************************************** 1: Total Tests: 388 1: Skipped: 0 1: Errors: 0 1: ************************************** 2: TEST SUITE test_align_extend 2: SEQAN_ENABLE_DEBUG == 1 2: SEQAN_ENABLE_TESTING == 1 2: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 2: SEQAN_ASYNC_IO == 1 2: test_align_extend_simple OK 2: test_align_extend_simple_infixes_recomp OK 2: test_align_extend_banded OK 2: test_align_extend_xdrop OK 2: test_align_extend_xdrop_banded OK 2: test_align_extend_semiglobal OK 2: ************************************** 2: Total Tests: 6 2: Skipped: 0 2: Errors: 0 2: ************************************** 3: TEST SUITE test_align_parallel_data_structures 3: SEQAN_ENABLE_DEBUG == 1 3: SEQAN_ENABLE_TESTING == 1 3: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 3: SEQAN_ASYNC_IO == 1 3: test_align_parallel_wavefront_task_scheduler_construct OK 3: test_align_parallel_wavefront_task_scheduler_async OK 3: test_align_parallel_wavefront_alignment_scheduler_construct OK 4: TEST SUITE tests 4: SEQAN_ENABLE_DEBUG == 1 4: SEQAN_ENABLE_TESTING == 1 4: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 4: SEQAN_ASYNC_IO == 1 4: ParallelAlignInterfaceTestCommon_Global_Score type parameter std::tuple, seqan2::Tag > > OK 4: ParallelAlignInterfaceTestCommon_Global_Score type parameter std::tuple, seqan2::Tag > > OK 5: TEST SUITE test_align_parallel_algorithm 5: SEQAN_ENABLE_DEBUG == 1 5: SEQAN_ENABLE_TESTING == 1 5: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 5: SEQAN_ASYNC_IO == 1 5: test_align_parallel_wavefront_single_global_alignment OK 6: TEST SUITE test_align_profile 6: SEQAN_ENABLE_DEBUG == 1 6: SEQAN_ENABLE_TESTING == 1 6: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 6: SEQAN_ASYNC_IO == 1 6: test_align_profile_profile_test OK 6: test_align_profile_align_profile_sequence OK 6: test_align_profile_align_profile_sequence_frac OK 6: test_align_profile_add_to_profile OK 6: test_align_profile_add_to_profile_multiple OK 6: test_align_profile_add_to_profile_banded OK 6: test_align_profile_add_to_profile_multiple_banded OK 6: ************************************** 6: Total Tests: 7 6: Skipped: 0 6: Errors: 0 6: ************************************** 1/411 Test #1: test_test_align ................................................................... Passed 0.03 sec 2/411 Test #2: test_test_align_extend ............................................................ Passed 0.03 sec 3/411 Test #6: test_test_align_profile ........................................................... Passed 0.01 sec 7: TEST SUITE test_align_split 7: SEQAN_ENABLE_DEBUG == 1 7: SEQAN_ENABLE_TESTING == 1 7: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 7: SEQAN_ASYNC_IO == 1 7: test_align_split_overlapping_reads_in_reference_align_unbanded OK 7: test_align_split_overlapping_contigs_in_reference_align_unbanded OK 7: test_align_split_insertion_in_reference_align_unbanded OK 7: test_align_split_overlapping_reads_in_reference_gaps_unbanded OK 7: test_align_split_overlapping_contigs_in_reference_gaps_unbanded OK 7: test_align_split_insertion_in_reference_gaps_unbanded OK 7: test_align_split_overlapping_reads_in_reference_align_banded OK 8: TEST SUITE test_alignment_free 8: SEQAN_ENABLE_DEBUG == 1 8: SEQAN_ENABLE_TESTING == 1 8: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 8: SEQAN_ASYNC_IO == 1 8: test_alignment_free_d2_dna OK 8: test_alignment_free_d2_dna5 OK test 9 Start 9: test_test_arg_parse 9: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_arg_parse 9: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/arg_parse 9: Test timeout computed to be: 10000000 test 10 Start 10: test_test_arg_parse_version_check 10: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_arg_parse_version_check 10: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/arg_parse 10: Test timeout computed to be: 10000000 test 11 Start 11: test_test_bam_io 11: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_bam_io 11: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/bam_io 11: Test timeout computed to be: 10000000 7: test_align_split_overlapping_contigs_in_reference_align_banded OK 7: test_align_split_insertion_in_reference_align_banded OK 7: test_align_split_overlapping_reads_in_reference_gaps_banded OK 7: test_align_split_overlapping_contigs_in_reference_gaps_banded OK 7: test_align_split_insertion_in_reference_gaps_banded OK 7: test_align_split_issue_1679 OK 7: ************************************** 7: Total Tests: 13 7: Skipped: 0 7: Errors: 0 7: ************************************** 8: test_alignment_free_d2star_dna5 OK 8: test_alignment_free_d2z_dna5 OK 3: test_align_parallel_wavefront_alignment_scheduler_async OK 9: TEST SUITE test_arg_parse 9: SEQAN_ENABLE_DEBUG == 1 9: SEQAN_ENABLE_TESTING == 1 9: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 9: SEQAN_ASYNC_IO == 1 9: test_unset_value OK 9: test_unset_values OK 9: test_int_short_argument OK 9: test_int_long_argument OK 9: test_non_int_argument OK 9: test_int64_short_argument OK 9: test_int64_long_argument OK 9: test_non_int64_argument OK 9: test_double_short_argument OK 9: test_double_long_argument OK 9: test_non_double_argument OK 9: test_double_scientific_notation OK 9: test_string_short_argument OK 9: test_string_long_argument OK 9: test_string_missing_argument OK 9: test_string_list OK 9: test_min_max_double_values_in_range OK 9: test_min_max_double_values_to_small OK 9: test_min_max_double_values_to_big OK 9: test_min_max_int_values_in_range OK 9: test_min_max_int_values_to_small OK 9: test_min_max_int_values_to_big OK 9: test_allowed_values_contained OK 9: test_allowed_values_not_contained OK 9: test_input_file_short OK 9: test_input_file_long OK 9: test_input_file_missing OK 4/411 Test #7: test_test_align_split ............................................................. Passed 0.03 sec 9: test_input_file_invalid_type OK 9: test_input_file_valid_type OK 9: test_input_file_extension OK 9: test_input_file_auto_file_ext_option OK 9: test_output_file_short OK 9: test_output_file_long OK 9: test_output_file_missing OK 9: test_output_file_invalid_type OK 9: test_output_file_valid_type OK 9: test_output_file_extension OK 9: test_output_file_extension_targz OK 9: test_output_file_explicit_extension_valid OK 9: test_output_file_explicit_extension_invalid OK 9: test_argument_string OK 9: test_argument_not_all_set OK 9: test_argument_double OK 9: test_argument_not_a_double OK 9: test_argument_auto_file_ext_option OK 9: test_int_list_option OK 9: test_double_list_option OK 9: test_double_list_option_not_enough_arguments OK 9: test_boolean_argument_on OK 9: test_boolean_argument_off OK 9: test_boolean_flags OK 9: test_combined_boolean_flags OK 9: test_long_short_flag_name OK 9: test_argument_string_type OK 9: test_argument_int_type OK 9: test_argument_int64_type OK 9: test_argument_double_type OK 9: test_argument_inputfile_type OK 9: test_argument_outputfile_type OK 9: test_argument_inputprefix_type OK 9: test_argument_outputprefix_type OK 9: test_argument_label OK 9: test_argument_invalid_cast OK 9: test_argument_min_max_boundaries OK 9: test_argument_valid_values OK 9: test_argument_valid_values_directories OK 9: test_argument_parser OK 9: test_parse_non_const_cstring OK 9: test_default_value OK 9: test_isDouble OK 9: test_isInt OK 11: TEST SUITE test_bam_io 11: SEQAN_ENABLE_DEBUG == 1 11: SEQAN_ENABLE_TESTING == 1 11: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 11: SEQAN_ASYNC_IO == 1 11: test_bam_io_bam_alignment_record_class OK 11: test_bam_io_bam_alignment_record_has_flag_multiple OK 11: test_bam_io_bam_alignment_record_has_flag_unmapped OK 11: test_bam_io_bam_alignment_record_has_flag_next_unmapped OK 11: test_bam_io_bam_alignment_record_has_flag_rc OK 11: test_bam_io_bam_alignment_record_has_flag_next_rc OK 11: test_bam_io_bam_alignment_record_has_flag_first OK 11: test_bam_io_bam_alignment_record_has_flag_last OK 11: test_bam_io_bam_alignment_record_has_flag_secondary OK 11: test_bam_io_bam_alignment_record_has_flag_qc_no_pass OK 11: test_bam_io_bam_alignment_record_has_flag_duplicate OK 11: test_bam_io_bam_alignment_record_has_flag_supplementary OK 11: test_bam_io_bam_header_class OK 11: test_bam_io_bam_header_typedefs OK 11: test_bam_io_bam_header_record_class OK 11: test_bam_io_bam_header_record_typedefs OK 11: test_bam_io_bam_header_record_find_tag_key OK 11: test_bam_io_bam_header_record_get_tag_value OK 11: test_bam_io_bam_io_context_standalone OK 11: test_bam_io_bam_io_context_fragment_store OK 11: test_assign_tags_bam_to_sam_two_tags OK 11: test_assign_tags_bam_to_sam_type_A OK 11: test_assign_tags_bam_to_sam_type_c OK 11: test_assign_tags_bam_to_sam_type_C OK 11: test_assign_tags_bam_to_sam_type_s OK 11: test_assign_tags_bam_to_sam_type_S OK 11: test_assign_tags_bam_to_sam_type_i OK 11: test_assign_tags_bam_to_sam_type_I OK 11: test_assign_tags_bam_to_sam_type_f OK 11: test_assign_tags_bam_to_sam_type_Z OK 11: test_assign_tags_bam_to_sam_type_H OK 11: test_assign_tags_bam_to_sam_type_Bc OK 11: test_assign_tags_bam_to_sam_type_BC OK 11: test_assign_tags_bam_to_sam_type_Bs OK 11: test_assign_tags_bam_to_sam_type_BS OK 11: test_assign_tags_bam_to_sam_type_Bi OK 11: test_assign_tags_bam_to_sam_type_BI OK 11: test_assign_tags_bam_to_sam_type_Bf OK 11: test_assign_tags_sam_to_bam_two_tags OK 11: test_assign_tags_sam_to_bam_type_A OK 11: test_assign_tags_sam_to_bam_type_i OK 11: test_assign_tags_sam_to_bam_type_f OK 11: test_assign_tags_sam_to_bam_type_Z OK 11: test_assign_tags_sam_to_bam_type_H OK 11: test_assign_tags_sam_to_bam_type_Bc OK 11: test_assign_tags_sam_to_bam_type_BC OK 11: test_assign_tags_sam_to_bam_type_Bs OK 11: test_assign_tags_sam_to_bam_type_BS OK 11: test_assign_tags_sam_to_bam_type_Bi OK 11: test_assign_tags_sam_to_bam_type_BI OK 11: test_assign_tags_sam_to_bam_type_Bf OK 11: test_bam_tags_dict_get_type_size OK 11: test_bam_tags_dict_get_type OK 11: test_bam_tags_dict_length OK 11: test_bam_tags_dict_extract_value_type_A OK 11: test_bam_tags_dict_extract_value_type_c OK 11: test_bam_tags_dict_extract_value_type_C OK 11: test_bam_tags_dict_extract_value_type_s OK 11: test_bam_tags_dict_extract_value_type_S OK 11: test_bam_tags_dict_extract_value_type_i OK 11: test_bam_tags_dict_extract_value_type_I OK 11: test_bam_tags_dict_get_value_type_A OK 11: test_bam_tags_dict_get_value_type_c OK 11: test_bam_tags_dict_get_value_type_C OK 11: test_bam_tags_dict_get_value_type_s OK 11: test_bam_tags_dict_get_value_type_S OK 11: test_bam_tags_dict_get_value_type_i OK 11: test_bam_tags_dict_get_value_type_I OK 11: test_bam_tags_dict_get_value_type_f OK 11: test_bam_tags_dict_get_value_type_Z OK 11: test_bam_tags_dict_get_value_type_H OK 11: test_bam_tags_dict_get_value_type_Bc OK 11: test_bam_tags_dict_get_value_type_BC OK 11: test_bam_tags_dict_get_value_type_Bs OK 11: test_bam_tags_dict_get_value_type_BS OK 11: test_bam_tags_dict_get_value_type_Bi OK 11: test_bam_tags_dict_get_value_type_BI OK 11: test_bam_tags_dict_get_value_type_Bf OK 11: test_bam_tags_dict_erase_tag OK 11: test_bam_tags_dict_set_tag_value OK 11: test_bam_tags_dict_append_tag_value OK 11: test_bam_tags_dict_const_bam_tags_sequence OK 11: test_bam_io_sam_read_header OK 11: test_bam_io_sam_read_alignment OK 11: test_bam_io_sam_write_header OK 11: test_bam_io_sam_write_alignment OK 11: test_bam_io_bam_read_header OK 11: test_bam_io_bam_read_alignment OK 11: test_bam_io_bam_write_header OK 11: test_bam_io_bam_write_alignment OK 11: test_bam_io_bam_file_isOpen_fileIn OK 11: test_bam_io_bam_file_isOpen_fileOut OK 10: TEST SUITE test_arg_parse 10: SEQAN_ENABLE_DEBUG == 1 10: SEQAN_ENABLE_TESTING == 1 10: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 10: SEQAN_ASYNC_IO == 1 10: test_path_availability OK 10: test_delete_version_files OK 10: test_create_files OK test 12 Start 12: test_test_basic_exception 12: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_basic_exception 12: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic 12: Test timeout computed to be: 10000000 9: test_arg_parse_ctd_support OK 9: ************************************** 9: Total Tests: 72 9: Skipped: 0 9: Errors: 0 9: ************************************** 11: test_bam_io_bam_file_sam_file_size OK 11: test_bam_io_bam_file_sam_read_header OK 11: test_bam_io_bam_file_sam_read_records OK 11: test_bam_io_bam_file_sam_write_header OK 11: test_bam_io_bam_file_sam_write_records OK 3: test_align_parallel_wavefront_alignment_scheduler_async_with_exception OK 3: test_align_parallel_intermediate_dp_result_construct OK 3: test_align_parallel_intermediate_dp_result_update_max OK 3: test_align_parallel_intermediate_dp_result_clear OK 3: test_align_parallel_wavefront_alignment_thread_local_storage_construt OK 3: test_align_parallel_wavefront_alignment_thread_local_storage_cache OK 3: test_align_parallel_wavefront_alignment_thread_local_storage_intermediate OK 3: ************************************** 3: Total Tests: 11 3: Skipped: 0 3: Errors: 0 3: ************************************** 12: TEST SUITE test_basic_exception 12: SEQAN_ENABLE_DEBUG == 1 12: SEQAN_ENABLE_TESTING == 1 12: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 12: SEQAN_ASYNC_IO == 1 12: test_basic_exception_try_catch OK 12: test_basic_exception_bad_alloc OK 12: test_basic_exception_runtime_error OK 12: ************************************** 12: Total Tests: 3 12: Skipped: 0 12: Errors: 0 12: ************************************** 5/411 Test #3: test_align_parallel_data_structures ............................................... Passed 0.05 sec 6/411 Test #9: test_test_arg_parse ............................................................... Passed 0.03 sec 7/411 Test #12: test_test_basic_exception ......................................................... Passed 0.01 sec test 13 Start 13: test_test_basic_metaprogramming 13: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_basic_metaprogramming 13: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic 13: Test timeout computed to be: 10000000 test 14 Start 14: test_test_basic_fundamental 14: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_basic_fundamental 14: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic 14: Test timeout computed to be: 10000000 test 15 Start 15: test_test_basic_concept 15: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_basic_concept 15: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic 15: Test timeout computed to be: 10000000 4: ParallelAlignInterfaceTestCommon_Global_Score type parameter std::tuple, seqan2::Tag > > OK 4: ParallelAlignInterfaceTestCommon_Global_Score type parameter std::tuple >, seqan2::Tag > > OK 4: ParallelAlignInterfaceTestCommon_Semi_Global_Score type parameter std::tuple, seqan2::Tag > > OK 11: test_bam_io_bam_file_bam_file_size OK 11: test_bam_io_bam_file_bam_read_header OK 11: test_bam_io_bam_file_bam_read_records OK 10: test_option_on OK 10: test_delete_version_files OK 10: test_option_off OK 10: test_delete_version_files OK 13: TEST SUITE test_basic_metaprogramming 13: SEQAN_ENABLE_DEBUG == 1 13: SEQAN_ENABLE_TESTING == 1 13: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 13: SEQAN_ASYNC_IO == 1 13: test_basic_metaprogramming_logic_bool_type OK 13: test_basic_metaprogramming_logic_eval OK 13: test_basic_metaprogramming_logic_or OK 13: test_basic_metaprogramming_logic_or_c OK 13: test_basic_metaprogramming_logic_and OK 13: test_basic_metaprogramming_logic_and_c OK 13: test_basic_metaprogramming_logic_if OK 13: test_basic_metaprogramming_logic_if_c OK 13: test_basic_metaprogramming_control_loop_reverse OK 13: test_basic_metaprogramming_control_loop OK 13: test_basic_metaprogramming_control_switch OK 13: test_basic_metaprogramming_control_if OK 13: test_basic_metaprogramming_math_log2 OK 13: test_basic_metaprogramming_math_log2_floor OK 13: test_basic_metaprogramming_math_log2_power OK 13: test_basic_metaprogramming_type_same_type OK 13: test_basic_metaprogramming_type_make_signed OK 13: test_basic_metaprogramming_type_make_unsigned OK 13: test_basic_metaprogramming_type_remove_reference OK 13: test_basic_metaprogramming_type_remove_const OK 13: test_basic_metaprogramming_type_is_const OK 13: test_basic_metaprogramming_type_class_identifier OK 13: test_basic_metaprogramming_enable_if_disable_if OK 13: test_basic_metaprogramming_enable_if2_disable_if2 OK 13: ************************************** 13: Total Tests: 24 13: Skipped: 0 13: Errors: 0 13: ************************************** 14: TEST SUITE test_basic_metaprogramming 14: SEQAN_ENABLE_DEBUG == 1 14: SEQAN_ENABLE_TESTING == 1 14: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 14: SEQAN_ASYNC_IO == 1 14: test_basic_fundamental_tags_tag OK 14: test_basic_fundamental_tags_tags OK 14: test_basic_fundamental_tags_tag_list OK 14: test_basic_fundamental_tags_tag_selector OK 14: test_basic_fundamental_tags_length_tag_list OK 14: test_basic_fundamental_metafunctions_value OK 14: test_basic_fundamental_metafunctions_get_value OK 14: test_basic_fundamental_metafunctions_reference OK 14: test_basic_fundamental_metafunctions_size OK 14: test_basic_fundamental_metafunctions_difference OK 14: test_basic_fundamental_metafunctions_position OK 14: test_basic_fundamental_metafunctions_spec OK 14: test_basic_fundamental_metafunctions_deepest_spec OK 14: test_basic_fundamental_transport_assign OK 14: test_basic_fundamental_transport_move OK 14: test_basic_fundamental_transport_set OK 14: test_basic_fundamental_comparison_compare_type OK 14: test_basic_fundamental_convert_metafunction OK 14: test_basic_fundamental_convert_function OK 14: test_basic_array_construct_destruct_metafunction_is_simple OK 14: test_basic_array_construct_destruct_construct_value_pointer OK 14: test_basic_array_construct_destruct_destruct_value_pointer OK 14: test_basic_array_construct_destruct_array_construct_pointer OK 14: test_basic_array_construct_destruct_array_construct_copy_pointer OK 14: test_basic_array_construct_destruct_array_construct_move_pointer OK 14: test_basic_array_construct_destruct_array_destruct_pointer OK 14: test_basic_array_construct_destruct_array_fill_pointer OK 14: test_basic_array_construct_destruct_array_copy_forward_pointer OK 14: test_basic_array_construct_destruct_array_copy_backward_pointer OK 14: test_basic_array_construct_destruct_array_copy_pointer OK 14: test_basic_array_construct_destruct_array_move_forward_pointer OK 14: test_basic_array_construct_destruct_array_move_backward_pointer OK 14: test_basic_array_construct_destruct_array_move_pointer OK 14: test_basic_array_construct_destruct_array_clear_space_pointer OK 14: ************************************** 14: Total Tests: 34 14: Skipped: 0 14: Errors: 0 14: ************************************** 15: TEST SUITE test_basic_concept 15: SEQAN_ENABLE_DEBUG == 1 15: SEQAN_ENABLE_TESTING == 1 15: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 15: SEQAN_ASYNC_IO == 1 15: test_basic_concepts_concept_impl OK 15: test_basic_concepts_concept_refine OK 15: test_basic_concepts_move_construtible_concept OK 15: ************************************** 15: Total Tests: 3 15: Skipped: 0 15: Errors: 0 15: ************************************** 8/411 Test #13: test_test_basic_metaprogramming ................................................... Passed 0.01 sec 9/411 Test #14: test_test_basic_fundamental ....................................................... Passed 0.01 sec 10/411 Test #15: test_test_basic_concept ........................................................... Passed 0.01 sec test 16 Start 16: test_test_basic_alphabet 16: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_basic_alphabet 16: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic 16: Test timeout computed to be: 10000000 test 17 Start 17: test_test_basic_aggregate 17: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_basic_aggregate 17: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic 17: Test timeout computed to be: 10000000 test 18 Start 18: test_test_basic_allocator 18: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_basic_allocator 18: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic 18: Test timeout computed to be: 10000000 4: ParallelAlignInterfaceTestCommon_Semi_Global_Score type parameter std::tuple, seqan2::Tag > > OK 11: test_bam_io_bam_file_bam_read_ex1 OK 16: TEST SUITE test_basic_alphabet 16: SEQAN_ENABLE_DEBUG == 1 16: SEQAN_ENABLE_TESTING == 1 16: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 16: SEQAN_ASYNC_IO == 1 16: test_basic_alphabet_adapt_builtins_metafunction_is_char_type OK 16: test_basic_alphabet_adapt_builtins_concepts_bool OK 16: test_basic_alphabet_adapt_builtins_concepts_char OK 16: test_basic_alphabet_adapt_builtins_concepts_short OK 16: test_basic_alphabet_adapt_builtins_concepts_int OK 16: test_basic_alphabet_adapt_builtins_concepts_long OK 16: test_basic_alphabet_adapt_builtins_concepts_int8 OK 16: test_basic_alphabet_adapt_builtins_concepts_uint8 OK 16: test_basic_alphabet_adapt_builtins_concepts_int16 OK 16: test_basic_alphabet_adapt_builtins_concepts_uint16 OK 16: test_basic_alphabet_adapt_builtins_concepts_int32 OK 16: test_basic_alphabet_adapt_builtins_concepts_uint32 OK 16: test_basic_alphabet_adapt_builtins_concepts_int64 OK 16: test_basic_alphabet_adapt_builtins_concepts_uint64 OK 16: test_basic_alphabet_adapt_builtins_concepts_float OK 16: test_basic_alphabet_adapt_builtins_concepts_double OK 16: test_basic_alphabet_qualities_quality_value_size_metafunction OK 16: test_basic_alphabet_qualities_quality_has_qualities_metafunction OK 16: test_basic_alphabet_qualities_convert_quality OK 16: test_basic_alphabet_bio_gap_value_function OK 16: test_basic_alphabet_bio_unknown_value_function OK 16: test_basic_alphabet_storage_bits_per_value_metafunction OK 16: test_basic_alphabet_storage_value_size_metafunction OK 16: test_basic_alphabet_storage_value_size_function OK 16: test_basic_alphabet_storage_integral_for_value_metafunction OK 16: test_basic_alphabet_storage_bytes_per_value_metafunction OK 16: test_basic_alphabet_residue_metafunctions_dna OK 16: test_basic_alphabet_residue_metafunctions_dna5 OK 16: test_basic_alphabet_residue_metafunctions_dna_q OK 16: test_basic_alphabet_residue_metafunctions_dna5_q OK 16: test_basic_alphabet_residue_metafunctions_rna OK 16: test_basic_alphabet_residue_metafunctions_rna5 OK 16: test_basic_alphabet_residue_metafunctions_iupac OK 16: test_basic_alphabet_residue_metafunctions_amino_acid OK 16: test_basic_alphabet_residue_usage_dna OK 16: test_basic_alphabet_residue_usage_dna5 OK 16: test_basic_alphabet_residue_usage_dna_q OK 16: test_basic_alphabet_residue_usage_dna5_q OK 16: test_basic_alphabet_residue_usage_rna OK 16: test_basic_alphabet_residue_usage_rna5 OK 16: test_basic_alphabet_residue_usage_iupac OK 16: test_basic_alphabet_residue_usage_amino_acid OK 16: test_basic_alphabet_profile_metafunctions OK 16: test_basic_alphabet_profile_constructors OK 16: test_basic_alphabet_profile_relations OK 16: test_basic_alphabet_profile_empty OK 16: ************************************** 16: Total Tests: 46 16: Skipped: 0 16: Errors: 0 16: ************************************** 18: TEST SUITE test_basic_allocator 18: SEQAN_ENABLE_DEBUG == 1 18: SEQAN_ENABLE_TESTING == 1 18: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 18: SEQAN_ASYNC_IO == 1 18: test_basic_allocator_simple OK 18: test_basic_allocator_pool OK 18: test_basic_allocator_multi_pool OK 18: test_basic_allocator_chunk_pool OK 18: ************************************** 18: Total Tests: 4 18: Skipped: 0 18: Errors: 0 18: ************************************** 11/411 Test #16: test_test_basic_alphabet .......................................................... Passed 0.01 sec 12/411 Test #18: test_test_basic_allocator ......................................................... Passed 0.00 sec 11: test_bam_io_bam_file_bam_write_header OK 10: test_smaller_seqan_version OK 10: test_delete_version_files OK 10: test_delete_version_files OK 17: TEST SUITE test_basic_aggregate 17: SEQAN_ENABLE_DEBUG == 1 17: SEQAN_ENABLE_TESTING == 1 17: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 17: SEQAN_ASYNC_IO == 1 17: test_basic_aggregates_pair_base_metafunctions OK 17: test_basic_aggregates_pair_base_constructors OK 17: test_basic_aggregates_pair_base_assign OK 17: test_basic_aggregates_pair_base_set OK 17: test_basic_aggregates_pair_base_move OK 17: test_basic_aggregates_pair_base_get_value OK 17: test_basic_aggregates_pair_base_assign_value OK 17: test_basic_aggregates_pair_base_set_value OK 17: test_basic_aggregates_pair_base_move_value OK 17: test_basic_aggregates_pair_base_comparison_same_spec OK 17: test_basic_aggregates_pair_base_comparison_different_spec OK 17: test_basic_aggregates_pair_base_stream_output OK 17: test_basic_aggregates_pair_packed_metafunctions OK 17: test_basic_aggregates_pair_packed_constructors OK 17: test_basic_aggregates_pair_packed_assign OK 17: test_basic_aggregates_pair_packed_set OK 17: test_basic_aggregates_pair_packed_move OK 17: test_basic_aggregates_pair_packed_get_value OK 17: test_basic_aggregates_pair_packed_assign_value OK 17: test_basic_aggregates_pair_packed_set_value OK 17: test_basic_aggregates_pair_packed_move_value OK 17: test_basic_aggregates_pair_packed_comparison_same_spec OK 17: test_basic_aggregates_pair_packed_comparison_different_spec OK 17: test_basic_aggregates_pair_packed_stream_output OK 17: test_basic_aggregates_pair_bit_packed_metafunctions OK 17: test_basic_aggregates_pair_bit_packed_constructors OK 17: test_basic_aggregates_pair_bit_packed_assign OK 17: test_basic_aggregates_pair_bit_packed_set OK 17: test_basic_aggregates_pair_bit_packed_move OK 17: test_basic_aggregates_pair_bit_packed_get_value OK 17: test_basic_aggregates_pair_bit_packed_assign_value OK 17: test_basic_aggregates_pair_bit_packed_set_value OK 17: test_basic_aggregates_pair_bit_packed_move_value OK 17: test_basic_aggregates_pair_bit_packed_comparison_same_spec OK 17: test_basic_aggregates_pair_bit_packed_comparison_different_spec OK 17: test_basic_aggregates_pair_bit_packed_stream_output OK 17: test_basic_aggregates_triple_base_metafunctions OK 17: test_basic_aggregates_triple_base_constructors OK 17: test_basic_aggregates_triple_base_assign OK 17: test_basic_aggregates_triple_base_set OK 17: test_basic_aggregates_triple_base_move OK 17: test_basic_aggregates_triple_base_get_value OK 17: test_basic_aggregates_triple_base_assign_value OK 17: test_basic_aggregates_triple_base_set_value OK 17: test_basic_aggregates_triple_base_move_value OK 17: test_basic_aggregates_triple_base_comparison_same_spec OK 17: test_basic_aggregates_triple_base_comparison_different_spec OK 17: test_basic_aggregates_triple_base_stream_output OK 17: test_basic_aggregates_triple_packed_metafunctions OK 17: test_basic_aggregates_triple_packed_constructors OK 17: test_basic_aggregates_triple_packed_assign OK 17: test_basic_aggregates_triple_packed_set OK 17: test_basic_aggregates_triple_packed_move OK 17: test_basic_aggregates_triple_packed_get_value OK 17: test_basic_aggregates_triple_packed_assign_value OK 17: test_basic_aggregates_triple_packed_set_value OK 17: test_basic_aggregates_triple_packed_move_value OK 17: test_basic_aggregates_triple_packed_comparison_same_spec OK 17: test_basic_aggregates_triple_packed_comparison_different_spec OK 17: test_basic_aggregates_triple_packed_stream_output OK 17: test_basic_aggregates_tuple_base_metafunctions OK 17: test_basic_aggregates_tuple_base_constructors OK 17: test_basic_aggregates_tuple_base_assign OK 17: test_basic_aggregates_tuple_base_set OK 17: test_basic_aggregates_tuple_base_move OK 17: test_basic_aggregates_tuple_base_get_value OK 17: test_basic_aggregates_tuple_base_assign_value OK 17: test_basic_aggregates_tuple_base_set_value OK 17: test_basic_aggregates_tuple_base_move_value OK 17: test_basic_aggregates_tuple_base_shift_left OK 17: test_basic_aggregates_tuple_base_shift_right OK 17: test_basic_aggregates_tuple_base_clear OK 17: test_basic_aggregates_tuple_base_length OK 17: test_basic_aggregates_tuple_base_comparison_same_spec OK 17: test_basic_aggregates_tuple_base_stream_output OK 17: test_basic_aggregates_tuple_bit_packed_metafunctions OK 17: test_basic_aggregates_tuple_bit_packed_constructors OK 17: test_basic_aggregates_tuple_bit_packed_assign OK 17: test_basic_aggregates_tuple_bit_packed_set OK 17: test_basic_aggregates_tuple_bit_packed_move OK 17: test_basic_aggregates_tuple_bit_packed_get_value OK 17: test_basic_aggregates_tuple_bit_packed_assign_value OK 17: test_basic_aggregates_tuple_bit_packed_set_value OK 17: test_basic_aggregates_tuple_bit_packed_move_value OK 17: test_basic_aggregates_tuple_bit_packed_shift_left OK 17: test_basic_aggregates_tuple_bit_packed_shift_right OK 17: test_basic_aggregates_tuple_bit_packed_clear OK 17: test_basic_aggregates_tuple_bit_packed_length OK 17: test_basic_aggregates_tuple_bit_packed_comparison_same_spec OK 17: test_basic_aggregates_tuple_bit_packed_stream_output OK 17: ************************************** 17: Total Tests: 90 17: Skipped: 0 17: Errors: 0 17: ************************************** test 19 Start 19: test_test_basic_parallelism 19: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_basic_parallelism 19: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic 19: Test timeout computed to be: 10000000 test 20 Start 20: test_test_basic_math 20: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_basic_math 20: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic 20: Test timeout computed to be: 10000000 11: test_bam_io_bam_file_bam_write_records OK 10: test_smaller_app_version OK 10: test_delete_version_files OK 4: ParallelAlignInterfaceTestCommon_Semi_Global_Score type parameter std::tuple, seqan2::Tag > > OK 19: TEST SUITE test_basic_parallelism 19: SEQAN_ENABLE_DEBUG == 1 19: SEQAN_ENABLE_TESTING == 1 19: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 19: SEQAN_ASYNC_IO == 1 19: test_basic_parallelism_enable_parallelism_macro OK 19: ************************************** 19: Total Tests: 1 19: Skipped: 0 19: Errors: 0 19: ************************************** 13/411 Test #17: test_test_basic_aggregate ......................................................... Passed 0.02 sec 14/411 Test #19: test_test_basic_parallelism ....................................................... Passed 0.02 sec test 21 Start 21: test_test_basic_smart_pointer 21: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_basic_smart_pointer 21: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic 21: Test timeout computed to be: 10000000 test 22 Start 22: test_test_basic_container 22: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_basic_container 22: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic 22: Test timeout computed to be: 10000000 20: TEST SUITE test_basic_math 20: SEQAN_ENABLE_DEBUG == 1 20: SEQAN_ENABLE_TESTING == 1 20: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 20: SEQAN_ASYNC_IO == 1 20: test_basic_math_int_pow OK 20: test_basic_math_log2 OK 20: test_basic_math_min OK 20: test_basic_math_max OK 20: test_basic_math_abs OK 20: ************************************** 20: Total Tests: 5 20: Skipped: 0 20: Errors: 0 20: ************************************** 4: ParallelAlignInterfaceTestCommon_Semi_Global_Score type parameter std::tuple >, seqan2::Tag > > OK 4: ParallelAlignInterfaceTestCommon_Local_Score type parameter std::tuple, seqan2::Tag > > OK 21: TEST SUITE test_basic_smart_pointer 21: SEQAN_ENABLE_DEBUG == 1 21: SEQAN_ENABLE_TESTING == 1 21: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 21: SEQAN_ASYNC_IO == 1 21: test_basic_smart_pointer_holder_simple_metafunctions OK 21: test_basic_smart_pointer_holder_simple_constructors OK 21: test_basic_smart_pointer_holder_simple_transport OK 21: test_basic_smart_pointer_holder_simple_transport_value OK 21: test_basic_smart_pointer_holder_simple_dependencies OK 21: test_basic_smart_pointer_holder_simple_accessor OK 21: test_basic_smart_pointer_holder_tristate_metafunctions OK 21: test_basic_smart_pointer_holder_tristate_constructors OK 21: test_basic_smart_pointer_holder_tristate_transport OK 21: test_basic_smart_pointer_holder_tristate_transport_value OK 21: test_basic_smart_pointer_holder_tristate_dependencies OK 21: test_basic_smart_pointer_holder_tristate_accessor OK 21: ************************************** 21: Total Tests: 12 21: Skipped: 0 21: Errors: 0 21: ************************************** 15/411 Test #20: test_test_basic_math .............................................................. Passed 0.01 sec 16/411 Test #21: test_test_basic_smart_pointer ..................................................... Passed 0.01 sec test 23 Start 23: test_test_basic_proxy 23: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_basic_proxy 23: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic 23: Test timeout computed to be: 10000000 test 24 Start 24: test_test_basic_iterator 24: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_basic_iterator 24: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/basic 24: Test timeout computed to be: 10000000 22: TEST SUITE test_basic_container 22: SEQAN_ENABLE_DEBUG == 1 22: SEQAN_ENABLE_TESTING == 1 22: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 22: SEQAN_ASYNC_IO == 1 22: ************************************** 22: Total Tests: 0 22: Skipped: 0 22: Errors: 0 22: ************************************** 4: ParallelAlignInterfaceTestCommon_Local_Score type parameter std::tuple, seqan2::Tag > > OK 10: test_greater_app_version OK 10: test_delete_version_files OK 23: TEST SUITE test_basic_proxy 23: SEQAN_ENABLE_DEBUG == 1 23: SEQAN_ENABLE_TESTING == 1 23: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 23: SEQAN_ASYNC_IO == 1 23: test_basic_proxy_iterator_constructors OK 23: test_basic_proxy_iterator_assign OK 23: test_basic_proxy_iterator_getValue OK 23: test_basic_proxy_iterator_comparators OK 23: test_basic_proxy_iterator_stream_read OK 23: test_basic_proxy_iterator_stream_write OK 23: ************************************** 23: Total Tests: 6 23: Skipped: 0 23: Errors: 0 23: ************************************** 17/411 Test #22: test_test_basic_container ......................................................... Passed 0.01 sec 18/411 Test #23: test_test_basic_proxy ............................................................. Passed 0.01 sec test 25 Start 25: test_test_bed_io 25: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_bed_io 25: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/bed_io 25: Test timeout computed to be: 10000000 test 26 Start 26: test_blast 26: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_blast 26: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/blast 26: Test timeout computed to be: 10000000 24: TEST SUITE test_basic_iterator 24: SEQAN_ENABLE_DEBUG == 1 24: SEQAN_ENABLE_TESTING == 1 24: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 24: SEQAN_ASYNC_IO == 1 24: test_basic_iterator_adapt_pointer_metafunctions OK 24: test_basic_iterator_adapt_pointer_transport OK 24: test_basic_iterator_adapt_pointer_transport_value OK 24: test_basic_iterator_adapt_pointer_movement OK 24: test_basic_iterator_adapt_pointer_arithmetics OK 24: test_basic_iterator_adapt_std_iterator_metafunctions OK 24: test_basic_iterator_adapt_std_iterator_constructors OK 24: test_basic_iterator_adapt_std_iterator_transport OK 24: test_basic_iterator_adapt_std_iterator_transport_value OK 24: test_basic_iterator_adapt_std_iterator_movement OK 24: test_basic_iterator_adapt_std_iterator_arithmetics OK 24: test_basic_iterator_adaptor_metafunctions OK 24: test_basic_iterator_adaptor_constructors OK 24: test_basic_iterator_adaptor_transport OK 24: test_basic_iterator_adaptor_transport_value OK 24: test_basic_iterator_adaptor_movement OK 24: test_basic_iterator_adaptor_arithmetics OK 24: test_basic_iterator_adaptor_rooted_functions OK 24: test_basic_iterator_position_metafunctions OK 24: test_basic_iterator_position_constructors OK 24: test_basic_iterator_position_transport OK 24: test_basic_iterator_position_transport_value OK 24: test_basic_iterator_position_movement OK 24: test_basic_iterator_position_arithmetics OK 24: test_basic_iterator_position_rooted_functions OK 24: test_basic_iterator_zip_metafunctions OK 24: test_basic_iterator_zip_constructors OK 24: test_basic_iterator_zip_make_zip_iterator OK 24: test_basic_iterator_zip_transport OK 24: test_basic_iterator_zip_transport_value OK 24: test_basic_iterator_zip_movement OK 24: test_basic_iterator_zip_arithmetics OK 24: ************************************** 24: Total Tests: 32 24: Skipped: 0 24: Errors: 0 24: ************************************** 8: test_alignment_free_n2_dna5 OK 8: test_alignment_free_calculate_probability OK 8: test_alignment_free_calculate_variance OK 8: test_alignment_free_calculate_covariance OK 4: ParallelAlignInterfaceTestCommon_Local_Score type parameter std::tuple, seqan2::Tag > > OK 25: TEST SUITE test_bed_io 25: SEQAN_ENABLE_DEBUG == 1 25: SEQAN_ENABLE_TESTING == 1 25: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 25: SEQAN_ASYNC_IO == 1 25: test_bed_read_bed3_record OK 25: test_bed_read_bed4_record OK 25: test_bed_read_bed5_record OK 25: test_bed_read_bed6_record OK 25: test_bed_read_bed12_record OK 25: test_bed_read_bed12_ucsc_compatibility OK 25: test_bed_write_bed3_record OK 25: test_bed_write_bed4_record OK 25: test_bed_write_bed5_record OK 25: test_bed_write_bed6_record OK 25: test_bed_write_bed12_record OK 25: test_bed_bed_file_read OK 25: test_bed_bed_file_write OK 25: test_bed_io_isOpen_fileIn OK 25: test_bed_io_isOpen_fileOut OK 25: ************************************** 25: Total Tests: 15 25: Skipped: 0 25: Errors: 0 25: ************************************** 19/411 Test #24: test_test_basic_iterator .......................................................... Passed 0.02 sec 20/411 Test #25: test_test_bed_io .................................................................. Passed 0.01 sec test 27 Start 27: test_test_consensus 27: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_consensus 27: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/consensus 27: Test timeout computed to be: 10000000 test 28 Start 28: test_test_consensus_v2 28: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_consensus_v2 28: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/consensus_v2 28: Test timeout computed to be: 10000000 10: test_time_out OK 10: ************************************** 10: Total Tests: 15 10: Skipped: 0 10: Errors: 0 10: ************************************** 27: TEST SUITE test_consensus 27: SEQAN_ENABLE_DEBUG == 1 27: SEQAN_ENABLE_TESTING == 1 27: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 27: SEQAN_ASYNC_IO == 1 21/411 Test #10: test_test_arg_parse_version_check ................................................. Passed 0.11 sec test 29 Start 29: test_test_find 29: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_find 29: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/find 29: Test timeout computed to be: 10000000 26: TEST SUITE test_blast 26: SEQAN_ENABLE_DEBUG == 1 26: SEQAN_ENABLE_TESTING == 1 26: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 26: SEQAN_ASYNC_IO == 1 26: test_blast_program OK 26: test_blast_context_targs OK 26: test_blast_scoring_scheme_conversion OK 26: test_blast_scoring_scheme OK 26: test_blast_blastmatch_stats_and_score OK 26: test_blast_blastmatch_bit_score_e_value OK 26: test_blast_write_lowlevel OK 26: test_blast_write_tabular_without_comments OK 26: test_blast_write_tabular_without_comments_customfields OK 26: test_blast_write_tabular_without_comments_legacy OK 26: test_blast_write_tabular_without_comments_constexpr OK 26: test_blast_write_tabular_without_comments_customfields_constexpr OK 26: test_blast_write_tabular_without_comments_legacy_constexpr OK 26: test_blast_write_tabular_with_comments OK 26: test_blast_write_tabular_with_comments_customfields OK 26: test_blast_write_tabular_with_comments_legacy OK 29: TEST SUITE test_find 29: SEQAN_ENABLE_DEBUG == 1 29: SEQAN_ENABLE_TESTING == 1 29: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 29: SEQAN_ASYNC_IO == 1 29: test_myers_find_begin OK 4: ParallelAlignInterfaceTestCommon_Local_Score type parameter std::tuple >, seqan2::Tag > > OK 4: ************************************** 4: Total Tests: 12 4: Skipped: 0 4: Errors: 0 4: ************************************** 22/411 Test #4: test_test_align_parallel_interface ................................................ Passed 0.14 sec 28: TEST SUITE test_consensus 28: SEQAN_ENABLE_DEBUG == 1 28: SEQAN_ENABLE_TESTING == 1 28: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 28: SEQAN_ASYNC_IO == 1 test 30 Start 30: test_test_gff_io 30: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_gff_io 30: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/gff_io 30: Test timeout computed to be: 10000000 30: TEST SUITE test_gff_io 30: SEQAN_ENABLE_DEBUG == 1 30: SEQAN_ENABLE_TESTING == 1 30: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 30: SEQAN_ASYNC_IO == 1 30: test_store_io_read_record_context_gff OK 30: test_store_io_write_record_context_gff OK 30: test_store_io_comment_processing_context_gff OK 30: test_store_io_read_record_context_gtf OK 30: test_store_io_read_record_gtf_pseudogenes OK 30: test_store_io_write_record_context_gtf OK 30: test_store_io_gff_stream_read_record_gff OK 30: test_store_io_gff_stream_read_record_gtf OK 30: test_store_io_gff_stream_write_record_gff OK 30: test_store_io_gff_stream_write_record_gtf OK 30: test_gff_io_isOpen_fileIn OK 30: test_gff_io_isOpen_fileOut OK 26: test_blast_write_tabular_with_comments_constexpr OK 30: ************************************** 30: Total Tests: 12 30: Skipped: 0 30: Errors: 0 30: ************************************** 26: test_blast_write_tabular_with_comments_customfields_constexpr OK 26: test_blast_write_tabular_with_comments_legacy_constexpr OK 26: test_blast_write_report OK 26: test_blast_write_report_constexpr OK 26: test_blast_write_report_constexpr_dynmatrix OK 23/411 Test #30: test_test_gff_io .................................................................. Passed 0.02 sec test 31 Start 31: test_test_graph_algorithms 31: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_graph_algorithms 31: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/graph_algorithms 31: Test timeout computed to be: 10000000 26: test_blast_read_lowlevel OK 26: test_blast_read_tabular_without_comments OK 26: test_blast_read_tabular_without_comments_customfields OK 26: test_blast_read_tabular_without_comments_legacy OK 26: test_blast_read_tabular_without_comments_constexpr OK 26: test_blast_read_tabular_without_comments_customfields_constexpr OK 26: test_blast_read_tabular_without_comments_legacy_constexpr OK 26: test_blast_read_tabular_with_comments OK 26: test_blast_read_tabular_with_comments_customfields OK 26: test_blast_read_tabular_with_comments_legacy OK 26: test_blast_read_tabular_with_comments_constexpr OK 26: test_blast_read_tabular_with_comments_customfields_constexpr OK 26: test_blast_read_tabular_with_comments_legacy_constexpr OK 26: ************************************** 26: Total Tests: 35 26: Skipped: 0 26: Errors: 0 26: ************************************** 27: test_consensus_realign_one_contig_small OK 27: test_consensus_consensus_score_sequence_entry_consensus_score OK 27: test_consensus_consensus_score_sequence_entry_fractional_score OK 27: test_consensus_consensus_score_sequence_entry_weightedconsensus_score OK 27: test_consensus_sequence_entry_for_score_metafunction_consensus_score OK 27: test_consensus_sequence_entry_for_score_metafunction_fractional_score OK 27: test_consensus_sequence_entry_for_score_metafunction_weightedconsensus_score OK 27: test_consensus_sequence_entry_for_score_consensus_score OK 27: test_consensus_sequence_entry_for_score_fractional_score OK 27: test_consensus_sequence_entry_for_score_weightedconsensus_score OK 27: test_consensus_host_consensus_score OK 27: test_consensus_host_fractional_score OK 27: test_consensus_host_weightedconsensus_score OK 27: test_consensus_position_consensus_score OK 27: test_consensus_position_fractional_score OK 27: test_consensus_position_weightedconsensus_score OK 27: test_consensus_value_consensus_score OK 27: test_consensus_value_fractional_score OK 27: test_consensus_value_weightedconsensus_score OK 27: ************************************** 27: Total Tests: 19 27: Skipped: 0 27: Errors: 0 27: ************************************** 24/411 Test #26: test_blast ........................................................................ Passed 0.05 sec 25/411 Test #27: test_test_consensus ............................................................... Passed 0.05 sec test 32 Start 32: test_test_graph_align 32: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_graph_align 32: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/graph_align 32: Test timeout computed to be: 10000000 test 33 Start 33: test_test_graph_msa 33: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_graph_msa 33: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/graph_msa 33: Test timeout computed to be: 10000000 31: TEST SUITE test_graph_algorithms 31: SEQAN_ENABLE_DEBUG == 1 31: SEQAN_ENABLE_TESTING == 1 31: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 31: SEQAN_ASYNC_IO == 1 31: test_heap_tree OK 31: test_breadth_first_search OK 31: test_depth_first_search OK 31: test_topological_sort OK 31: test_strongly_connected_components OK 31: test_connected_components OK 31: test_prims_algorithm OK 31: test_union_find OK 31: test_kruskals_algorithm OK 31: test_mst_all OK 31: test_dag_shortest_path OK 31: test_bellmann_ford OK 31: test_dijkstra OK 31: test_all_pairs_shortest_path OK 31: test_floyd_warshall OK 31: test_transitive_closure OK 31: test_ford_fulkerson OK 31: test_path_growing_algorithm OK 31: test_longest_increasing_subsequence OK 31: test_longest_common_subsequence OK 31: test_heaviest_increasing_subsequence OK 31: test_hmm_algorithm OK 31: ************************************** 31: Total Tests: 22 31: Skipped: 0 31: Errors: 0 31: ************************************** 32: TEST SUITE test_graph_align 32: SEQAN_ENABLE_DEBUG == 1 32: SEQAN_ENABLE_TESTING == 1 32: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 32: SEQAN_ASYNC_IO == 1 32: Test_Refinement_AlignmentGraphNoEdgeWeights OK 32: Test_Refinement_AlignmentGraphEdgeWeights OK 32: Test_Refinement_AlignmentGraphIterators OK 32: Test_Refinement_AlignmentGraphOutput OK 32: Test_Refinement_HeaviestCommonSubsequence OK 32: Test_Refinement_OutEdgeIteratorAlignment OK 32: RefineMatchesSelfEdges OK 32: RefineAlign OK 32: RefineInexactFragment OK 32: ************************************** 32: Total Tests: 9 32: Skipped: 0 32: Errors: 0 32: ************************************** 26/411 Test #31: test_test_graph_algorithms ........................................................ Passed 0.02 sec 27/411 Test #32: test_test_graph_align ............................................................. Passed 0.01 sec 5: test_align_parallel_wavefront_multiple_global_alignment OK 5: ************************************** 5: Total Tests: 2 5: Skipped: 0 5: Errors: 0 5: ************************************** 28/411 Test #5: test_test_align_parallel_algorithm ................................................ Passed 0.18 sec test 34 Start 34: test_test_graph_types_basic 34: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_graph_types_basic 34: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/graph_types 34: Test timeout computed to be: 10000000 test 35 Start 35: test_test_graph_types_property_map 35: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_graph_types_property_map 35: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/graph_types 35: Test timeout computed to be: 10000000 test 36 Start 36: test_test_graph_types_derived 36: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_graph_types_derived 36: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/graph_types 36: Test timeout computed to be: 10000000 33: TEST SUITE test_graph_msa 33: SEQAN_ENABLE_DEBUG == 1 33: SEQAN_ENABLE_TESTING == 1 33: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 33: SEQAN_ASYNC_IO == 1 33: test_graph_msa_guide_tree_neighbour_joining OK 34: TEST SUITE test_graph_types_basic 34: SEQAN_ENABLE_DEBUG == 1 34: SEQAN_ENABLE_TESTING == 1 34: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 34: SEQAN_ASYNC_IO == 1 34: test_graph_types_basic_id_manager OK 34: test_graph_types_basic_edge_stump OK 34: ************************************** 34: Total Tests: 2 34: Skipped: 0 34: Errors: 0 34: ************************************** 29/411 Test #34: test_test_graph_types_basic ....................................................... Passed 0.01 sec test 37 Start 37: test_test_graph_types_iterators 37: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_graph_types_iterators 37: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/graph_types 37: Test timeout computed to be: 10000000 35: TEST SUITE test_graph_types_property_map 35: SEQAN_ENABLE_DEBUG == 1 35: SEQAN_ENABLE_TESTING == 1 35: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 35: SEQAN_ASYNC_IO == 1 35: test_graph_types_property_map_external OK 35: test_graph_types_property_map_external_assign_vertex_map OK 35: test_graph_types_property_map_external_assign_edge_map OK 35: test_graph_types_property_internal_pointer_map OK 35: test_graph_types_property_internal_pointer_map_assign_edge_map_member OK 35: test_graph_types_property_internal_map OK 35: test_graph_types_property_internal_map_assign_edge_map OK 35: ************************************** 35: Total Tests: 7 35: Skipped: 0 35: Errors: 0 35: ************************************** 36: TEST SUITE test_graph_types_derived 36: SEQAN_ENABLE_DEBUG == 1 36: SEQAN_ENABLE_TESTING == 1 36: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 36: SEQAN_ASYNC_IO == 1 36: test_graph_types_derived_set_oracle OK 36: test_graph_types_derived_trie OK 36: test_graph_types_derived_oracle OK 36: ************************************** 36: Total Tests: 3 36: Skipped: 0 36: Errors: 0 36: ************************************** 30/411 Test #35: test_test_graph_types_property_map ................................................ Passed 0.01 sec 31/411 Test #36: test_test_graph_types_derived ..................................................... Passed 0.01 sec test 38 Start 38: test_test_graph_types_types 38: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_graph_types_types 38: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/graph_types 38: Test timeout computed to be: 10000000 test 39 Start 39: test_test_graph_types_utils 39: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_graph_types_utils 39: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/graph_types 39: Test timeout computed to be: 10000000 37: TEST SUITE test_graph_types_iterators 37: SEQAN_ENABLE_DEBUG == 1 37: SEQAN_ENABLE_TESTING == 1 37: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 37: SEQAN_ASYNC_IO == 1 37: test_graph_types_iterators_vertex_iterator OK 37: test_graph_types_iterators_out_edge_iterator OK 37: test_graph_types_iterators_edge_iterator OK 37: test_graph_types_iterators_ajacency_iterator OK 37: test_graph_types_bfs_iter OK 37: test_graph_types_dfs_preorder_iter OK 37: ************************************** 37: Total Tests: 6 37: Skipped: 0 37: Errors: 0 37: ************************************** 38: TEST SUITE test_graph_types_property_map 38: SEQAN_ENABLE_DEBUG == 1 38: SEQAN_ENABLE_TESTING == 1 38: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 38: SEQAN_ASYNC_IO == 1 38: test_graph_types_types_directed OK 38: test_graph_types_types_undirected OK 38: test_graph_types_types_automaton OK 38: test_graph_types_types_word_graph OK 38: test_graph_types_types_word_tree OK 38: test_graph_types_types_hmm OK 38: ************************************** 38: Total Tests: 6 38: Skipped: 0 38: Errors: 0 38: ************************************** 39: TEST SUITE test_graph_types_utils 39: SEQAN_ENABLE_DEBUG == 1 39: SEQAN_ENABLE_TESTING == 1 39: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 39: SEQAN_ASYNC_IO == 1 39: test_graph_types_utils_graph_drawing OK 39: ************************************** 39: Total Tests: 1 39: Skipped: 0 39: Errors: 0 39: ************************************** 32/411 Test #37: test_test_graph_types_iterators ................................................... Passed 0.01 sec 33/411 Test #38: test_test_graph_types_types ....................................................... Passed 0.01 sec 34/411 Test #39: test_test_graph_types_utils ....................................................... Passed 0.01 sec test 40 Start 40: test_test_index_creation 40: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_index_creation 40: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index 40: Test timeout computed to be: 10000000 test 41 Start 41: test_test_index_crosscompare_char 41: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_index_crosscompare_char 41: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index 41: Test timeout computed to be: 10000000 test 42 Start 42: test_test_index_crosscompare_char_dfi 42: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_index_crosscompare_char_dfi 42: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index 42: Test timeout computed to be: 10000000 28: test_consensus_consensus_alignment_coordinates OK 33: test_graph_msa_guide_tree_upgma_weight_avg OK 40: TEST SUITE test_index 40: SEQAN_ENABLE_DEBUG == 1 40: SEQAN_ENABLE_TESTING == 1 40: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 40: SEQAN_ASYNC_IO == 1 40: testIndexModifiedStringReverseEsa OK 41: TEST SUITE test_index 41: SEQAN_ENABLE_DEBUG == 1 41: SEQAN_ENABLE_TESTING == 1 41: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 41: SEQAN_ASYNC_IO == 1 41: testIndexCrossCompareChar OK 41: ************************************** 41: Total Tests: 1 41: Skipped: 0 41: Errors: 0 41: ************************************** 35/411 Test #41: test_test_index_crosscompare_char ................................................. Passed 0.01 sec test 43 Start 43: test_test_index_crosscompare_dna 43: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_index_crosscompare_dna 43: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index 43: Test timeout computed to be: 10000000 40: testIndexModifiedStringReverseFM OK 40: testIndexModifiedStringViewEsa OK 40: testIndexModifiedStringViewFM OK 40: testIssue519 OK 42: TEST SUITE test_index 42: SEQAN_ENABLE_DEBUG == 1 42: SEQAN_ENABLE_TESTING == 1 42: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 42: SEQAN_ASYNC_IO == 1 42: testIndexCrossCompareCharDfi OK 42: ************************************** 42: Total Tests: 1 42: Skipped: 0 42: Errors: 0 42: ************************************** 36/411 Test #42: test_test_index_crosscompare_char_dfi ............................................. Passed 0.00 sec test 44 Start 44: test_test_index_crosscompare_dna_dfi 44: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_index_crosscompare_dna_dfi 44: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index 44: Test timeout computed to be: 10000000 43: TEST SUITE test_index 43: SEQAN_ENABLE_DEBUG == 1 43: SEQAN_ENABLE_TESTING == 1 43: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 43: SEQAN_ASYNC_IO == 1 43: testIndexCrossCompareDna OK 44: TEST SUITE test_index 44: SEQAN_ENABLE_DEBUG == 1 44: SEQAN_ENABLE_TESTING == 1 44: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 44: SEQAN_ASYNC_IO == 1 44: testIndexCrossCompareDnaDfi OK 44: ************************************** 44: Total Tests: 1 44: Skipped: 0 44: Errors: 0 44: ************************************** 37/411 Test #44: test_test_index_crosscompare_dna_dfi .............................................. Passed 0.01 sec test 45 Start 45: test_test_index_qgram 45: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_index_qgram 45: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index 45: Test timeout computed to be: 10000000 45: TEST SUITE test_index 45: SEQAN_ENABLE_DEBUG == 1 45: SEQAN_ENABLE_TESTING == 1 45: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 45: SEQAN_ASYNC_IO == 1 45: testStepSize OK 45: testGappedShapes OK 45: testUngappedShapes OK 45: testUngappedQGramIndex OK 45: start 45: scan took 2.76e-06 seconds. 45: start write 45: writing took 4.16e-06 seconds. 45: reading took 4e-07 seconds. 45: start 45: scan took 2.8e-06 seconds. 45: start write 45: writing took 6.6881e-05 seconds. 45: reading took 4.40001e-07 seconds. 45: testUngappedQGramIndexMulti OK 45: testQGramFind OK 45: ************************************** 45: Total Tests: 6 45: Skipped: 0 45: Errors: 0 45: ************************************** 38/411 Test #45: test_test_index_qgram ............................................................. Passed 0.01 sec test 46 Start 46: test_test_index_sa_bwtwalk 46: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_index_sa_bwtwalk 46: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index 46: Test timeout computed to be: 10000000 33: test_graph_msa_guide_tree_upgma_avg OK 46: TEST SUITE test_index 46: SEQAN_ENABLE_DEBUG == 1 46: SEQAN_ENABLE_TESTING == 1 46: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 46: SEQAN_ASYNC_IO == 1 43: testIndexCrossCompareDnaStrings OK 43: ************************************** 43: Total Tests: 2 43: Skipped: 0 43: Errors: 0 43: ************************************** 39/411 Test #43: test_test_index_crosscompare_dna .................................................. Passed 0.03 sec test 47 Start 47: test_test_index_shapes 47: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_index_shapes 47: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index 47: Test timeout computed to be: 10000000 47: TEST SUITE test_index 47: SEQAN_ENABLE_DEBUG == 1 47: SEQAN_ENABLE_TESTING == 1 47: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 47: SEQAN_ASYNC_IO == 1 47: testShapes OK 47: ************************************** 47: Total Tests: 1 47: Skipped: 0 47: Errors: 0 47: ************************************** 40/411 Test #47: test_test_index_shapes ............................................................ Passed 0.00 sec test 48 Start 48: test_test_index_drawing 48: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_index_drawing 48: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index 48: Test timeout computed to be: 10000000 28: test_consensus_consensus_alignment_contig_ids OK 48: TEST SUITE test_index_drawing 48: SEQAN_ENABLE_DEBUG == 1 48: SEQAN_ENABLE_TESTING == 1 48: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 48: SEQAN_ASYNC_IO == 1 48: test_index_drawing_esa_dot OK 48: ************************************** 48: Total Tests: 1 48: Skipped: 0 48: Errors: 0 48: ************************************** 41/411 Test #48: test_test_index_drawing ........................................................... Passed 0.01 sec test 49 Start 49: test_test_index_fm_rank_dictionary 49: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_index_fm_rank_dictionary 49: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index 49: Test timeout computed to be: 10000000 49: TEST SUITE tests 49: SEQAN_ENABLE_DEBUG == 1 49: SEQAN_ENABLE_TESTING == 1 49: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 49: SEQAN_ASYNC_IO == 1 49: RankDictionaryTest_Constructor type parameter seqan2::RankDictionary, 1u, 1u> > > OK 49: RankDictionaryTest_Constructor type parameter seqan2::RankDictionary, 1u, 1u> > > OK 49: RankDictionaryTest_Constructor type parameter seqan2::RankDictionary, seqan2::Levels, 1u, 1u> > > OK 49: RankDictionaryTest_Constructor type parameter seqan2::RankDictionary, seqan2::Levels, 1u, 1u> > > OK 49: RankDictionaryTest_Constructor type parameter seqan2::RankDictionary, seqan2::Levels, 1u, 1u> > > OK 49: RankDictionaryTest_Constructor type parameter seqan2::RankDictionary > >, seqan2::Levels, 1u, 1u> > > OK 49: RankDictionaryTest_Constructor type parameter seqan2::RankDictionary, seqan2::Levels, 1u, 1u> > > OK 49: RankDictionaryTest_Constructor type parameter seqan2::RankDictionary, 2u, 2u> > > OK 49: RankDictionaryTest_Constructor type parameter seqan2::RankDictionary, seqan2::Levels, 2u, 2u> > > OK 49: RankDictionaryTest_Constructor type parameter seqan2::RankDictionary, seqan2::Levels, 2u, 2u> > > OK 49: RankDictionaryTest_Constructor type parameter seqan2::RankDictionary, seqan2::Levels, 2u, 2u> > > OK 49: RankDictionaryTest_Constructor type parameter seqan2::RankDictionary > >, seqan2::Levels, 2u, 2u> > > OK 49: RankDictionaryTest_Constructor type parameter seqan2::RankDictionary, seqan2::Levels, 2u, 2u> > > OK 49: RankDictionaryTest_Constructor type parameter seqan2::RankDictionary, 3u, 3u> > > OK 49: RankDictionaryTest_Constructor type parameter seqan2::RankDictionary, seqan2::Levels, 3u, 3u> > > OK 49: RankDictionaryTest_Constructor type parameter seqan2::RankDictionary, seqan2::Levels, 3u, 3u> > > OK 49: RankDictionaryTest_Constructor type parameter seqan2::RankDictionary, seqan2::Levels, 3u, 3u> > > OK 49: RankDictionaryTest_Constructor type parameter seqan2::RankDictionary > >, seqan2::Levels, 3u, 3u> > > OK 49: RankDictionaryTest_Constructor type parameter seqan2::RankDictionary, seqan2::Levels, 3u, 3u> > > OK 49: RankDictionaryTest_Constructor type parameter seqan2::RankDictionary, 1u, 1u> > > OK 49: RankDictionaryTest_Constructor type parameter seqan2::RankDictionary, seqan2::Levels, 1u, 1u> > > OK 49: RankDictionaryTest_Constructor type parameter seqan2::RankDictionary, seqan2::Levels, 1u, 1u> > > OK 49: RankDictionaryTest_Constructor type parameter seqan2::RankDictionary, seqan2::Levels, 1u, 1u> > > OK 49: RankDictionaryTest_Constructor type parameter seqan2::RankDictionary > >, seqan2::Levels, 1u, 1u> > > OK 33: test_graph_msa_guide_tree_upgma_min OK 49: RankDictionaryTest_Constructor type parameter seqan2::RankDictionary, seqan2::Levels, 1u, 1u> > > OK 49: RankDictionaryTest_Constructor type parameter seqan2::RankDictionary, 2u, 2u> > > OK 49: RankDictionaryTest_Constructor type parameter seqan2::RankDictionary, seqan2::Levels, 2u, 2u> > > OK 49: RankDictionaryTest_Constructor type parameter seqan2::RankDictionary, seqan2::Levels, 2u, 2u> > > OK 49: RankDictionaryTest_Constructor type parameter seqan2::RankDictionary, seqan2::Levels, 2u, 2u> > > OK 49: RankDictionaryTest_Constructor type parameter seqan2::RankDictionary > >, seqan2::Levels, 2u, 2u> > > OK 49: RankDictionaryTest_Constructor type parameter seqan2::RankDictionary, seqan2::Levels, 2u, 2u> > > OK 49: RankDictionaryTest_Constructor type parameter seqan2::RankDictionary, 3u, 3u> > > OK 49: RankDictionaryTest_Constructor type parameter seqan2::RankDictionary, seqan2::Levels, 3u, 3u> > > OK 49: RankDictionaryTest_Constructor type parameter seqan2::RankDictionary, seqan2::Levels, 3u, 3u> > > OK 49: RankDictionaryTest_Constructor type parameter seqan2::RankDictionary, seqan2::Levels, 3u, 3u> > > OK 49: RankDictionaryTest_Constructor type parameter seqan2::RankDictionary > >, seqan2::Levels, 3u, 3u> > > OK 49: RankDictionaryTest_Constructor type parameter seqan2::RankDictionary, seqan2::Levels, 3u, 3u> > > OK 49: RankDictionaryTest_Constructor type parameter seqan2::RankDictionary, 1u, 0u> > > OK 49: RankDictionaryTest_Constructor type parameter seqan2::RankDictionary, seqan2::WaveletTree, 1u, 0u> > > OK 49: RankDictionaryTest_Constructor type parameter seqan2::RankDictionary, seqan2::WaveletTree, 1u, 0u> > > OK 49: RankDictionaryTest_Constructor type parameter seqan2::RankDictionary, seqan2::WaveletTree, 1u, 0u> > > OK 49: RankDictionaryTest_Constructor type parameter seqan2::RankDictionary > >, seqan2::WaveletTree, 1u, 0u> > > OK 46: testBWTWalk OK 46: ************************************** 46: Total Tests: 1 46: Skipped: 0 46: Errors: 0 46: ************************************** 42/411 Test #46: test_test_index_sa_bwtwalk ........................................................ Passed 0.06 sec test 50 Start 50: test_test_index_fm_sparse_string 50: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_index_fm_sparse_string 50: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index 50: Test timeout computed to be: 10000000 49: RankDictionaryTest_Constructor type parameter seqan2::RankDictionary, seqan2::WaveletTree, 1u, 0u> > > OK 49: RankDictionaryTest_CreateRankDictionary type parameter seqan2::RankDictionary, 1u, 1u> > > OK 49: RankDictionaryTest_CreateRankDictionary type parameter seqan2::RankDictionary, 1u, 1u> > > OK 49: RankDictionaryTest_CreateRankDictionary type parameter seqan2::RankDictionary, seqan2::Levels, 1u, 1u> > > OK 49: RankDictionaryTest_CreateRankDictionary type parameter seqan2::RankDictionary, seqan2::Levels, 1u, 1u> > > OK 49: RankDictionaryTest_CreateRankDictionary type parameter seqan2::RankDictionary, seqan2::Levels, 1u, 1u> > > OK 49: RankDictionaryTest_CreateRankDictionary type parameter seqan2::RankDictionary > >, seqan2::Levels, 1u, 1u> > > OK 49: RankDictionaryTest_CreateRankDictionary type parameter seqan2::RankDictionary, seqan2::Levels, 1u, 1u> > > OK 49: RankDictionaryTest_CreateRankDictionary type parameter seqan2::RankDictionary, 2u, 2u> > > OK 49: RankDictionaryTest_CreateRankDictionary type parameter seqan2::RankDictionary, seqan2::Levels, 2u, 2u> > > OK 49: RankDictionaryTest_CreateRankDictionary type parameter seqan2::RankDictionary, seqan2::Levels, 2u, 2u> > > OK 49: RankDictionaryTest_CreateRankDictionary type parameter seqan2::RankDictionary, seqan2::Levels, 2u, 2u> > > OK 49: RankDictionaryTest_CreateRankDictionary type parameter seqan2::RankDictionary > >, seqan2::Levels, 2u, 2u> > > OK 49: RankDictionaryTest_CreateRankDictionary type parameter seqan2::RankDictionary, seqan2::Levels, 2u, 2u> > > OK 49: RankDictionaryTest_CreateRankDictionary type parameter seqan2::RankDictionary, 3u, 3u> > > OK 49: RankDictionaryTest_CreateRankDictionary type parameter seqan2::RankDictionary, seqan2::Levels, 3u, 3u> > > OK 49: RankDictionaryTest_CreateRankDictionary type parameter seqan2::RankDictionary, seqan2::Levels, 3u, 3u> > > OK 49: RankDictionaryTest_CreateRankDictionary type parameter seqan2::RankDictionary, seqan2::Levels, 3u, 3u> > > OK 49: RankDictionaryTest_CreateRankDictionary type parameter seqan2::RankDictionary > >, seqan2::Levels, 3u, 3u> > > OK 49: RankDictionaryTest_CreateRankDictionary type parameter seqan2::RankDictionary, seqan2::Levels, 3u, 3u> > > OK 50: TEST SUITE test_fm_index_sparse_string 50: SEQAN_ENABLE_DEBUG == 1 50: SEQAN_ENABLE_TESTING == 1 50: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 50: SEQAN_ASYNC_IO == 1 50: sparse_string_get_value OK 50: sparse_string_clear_length_resize OK 50: sparse_string_empty OK 50: sparse_string_get_fibre OK 50: ************************************** 50: Total Tests: 4 50: Skipped: 0 50: Errors: 0 50: ************************************** 43/411 Test #50: test_test_index_fm_sparse_string .................................................. Passed 0.00 sec 49: RankDictionaryTest_CreateRankDictionary type parameter seqan2::RankDictionary, 1u, 1u> > > OK 49: RankDictionaryTest_CreateRankDictionary type parameter seqan2::RankDictionary, seqan2::Levels, 1u, 1u> > > OK 49: RankDictionaryTest_CreateRankDictionary type parameter seqan2::RankDictionary, seqan2::Levels, 1u, 1u> > > OK 49: RankDictionaryTest_CreateRankDictionary type parameter seqan2::RankDictionary, seqan2::Levels, 1u, 1u> > > OK 49: RankDictionaryTest_CreateRankDictionary type parameter seqan2::RankDictionary > >, seqan2::Levels, 1u, 1u> > > OK 49: RankDictionaryTest_CreateRankDictionary type parameter seqan2::RankDictionary, seqan2::Levels, 1u, 1u> > > OK 49: RankDictionaryTest_CreateRankDictionary type parameter seqan2::RankDictionary, 2u, 2u> > > OK test 51 Start 51: test_test_index_base 51: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_index_base 51: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index 51: Test timeout computed to be: 10000000 49: RankDictionaryTest_CreateRankDictionary type parameter seqan2::RankDictionary, seqan2::Levels, 2u, 2u> > > OK 49: RankDictionaryTest_CreateRankDictionary type parameter seqan2::RankDictionary, seqan2::Levels, 2u, 2u> > > OK 49: RankDictionaryTest_CreateRankDictionary type parameter seqan2::RankDictionary, seqan2::Levels, 2u, 2u> > > OK 49: RankDictionaryTest_CreateRankDictionary type parameter seqan2::RankDictionary > >, seqan2::Levels, 2u, 2u> > > OK 49: RankDictionaryTest_CreateRankDictionary type parameter seqan2::RankDictionary, seqan2::Levels, 2u, 2u> > > OK 49: RankDictionaryTest_CreateRankDictionary type parameter seqan2::RankDictionary, 3u, 3u> > > OK 49: RankDictionaryTest_CreateRankDictionary type parameter seqan2::RankDictionary, seqan2::Levels, 3u, 3u> > > OK 49: RankDictionaryTest_CreateRankDictionary type parameter seqan2::RankDictionary, seqan2::Levels, 3u, 3u> > > OK 49: RankDictionaryTest_CreateRankDictionary type parameter seqan2::RankDictionary, seqan2::Levels, 3u, 3u> > > OK 49: RankDictionaryTest_CreateRankDictionary type parameter seqan2::RankDictionary > >, seqan2::Levels, 3u, 3u> > > OK 49: RankDictionaryTest_CreateRankDictionary type parameter seqan2::RankDictionary, seqan2::Levels, 3u, 3u> > > OK 49: RankDictionaryTest_CreateRankDictionary type parameter seqan2::RankDictionary, 1u, 0u> > > OK 49: RankDictionaryTest_CreateRankDictionary type parameter seqan2::RankDictionary, seqan2::WaveletTree, 1u, 0u> > > OK 49: RankDictionaryTest_CreateRankDictionary type parameter seqan2::RankDictionary, seqan2::WaveletTree, 1u, 0u> > > OK 49: RankDictionaryTest_CreateRankDictionary type parameter seqan2::RankDictionary, seqan2::WaveletTree, 1u, 0u> > > OK 49: RankDictionaryTest_CreateRankDictionary type parameter seqan2::RankDictionary > >, seqan2::WaveletTree, 1u, 0u> > > OK 49: RankDictionaryTest_CreateRankDictionary type parameter seqan2::RankDictionary, seqan2::WaveletTree, 1u, 0u> > > OK 49: RankDictionaryTest_ClearEmpty type parameter seqan2::RankDictionary, 1u, 1u> > > OK 49: RankDictionaryTest_ClearEmpty type parameter seqan2::RankDictionary, 1u, 1u> > > OK 49: RankDictionaryTest_ClearEmpty type parameter seqan2::RankDictionary, seqan2::Levels, 1u, 1u> > > OK 49: RankDictionaryTest_ClearEmpty type parameter seqan2::RankDictionary, seqan2::Levels, 1u, 1u> > > OK 49: RankDictionaryTest_ClearEmpty type parameter seqan2::RankDictionary, seqan2::Levels, 1u, 1u> > > OK 49: RankDictionaryTest_ClearEmpty type parameter seqan2::RankDictionary > >, seqan2::Levels, 1u, 1u> > > OK 29: test_myers_find_banded OK 29: test_myers_find_banded_csp OK 29: test_myers_find_infix_find_begin_at_start OK 29: test_myers_find_infix_find_begin_within OK 29: test_find_on_segments OK 29: test_find_hamming_simple OK 29: test_find_hamming_simple_regression_rmbench OK 29: test_regression_rmbench OK 29: test_find_online_Simple OK 29: test_find_online_Horspool OK 29: test_find_online_ShiftAnd OK 29: test_find_online_ShiftOr OK 29: test_find_online_BndmAlgo OK 29: test_find_online_BFAM_Oracle OK 29: test_find_online_BFAM_Trie OK 29: test_find_online_wildcards OK 29: test_find_online_multi_AhoCorasick OK 29: test_find_online_multi_MultipleShiftAnd OK 29: test_find_online_multi_SetHorspool OK 29: test_find_online_multi_WuManber OK 29: test_find_online_multi_MultiBFAM_Oracle OK 29: test_find_online_multi_MultiBFAM_Trie OK 29: test_find_approx_prefix_edit_dist_dpsearch OK 29: test_approx_prefix_edit_dist_myers OK 29: test_approx_edit_dist_dp_search_simple_score OK 29: test_approx_edit_dist_myers OK 29: test_approx_edit_dp_search_simple_score_legacy_case OK 29: test_approx_edit_dist_abndm_algo OK 29: test_approx_edit_dist_pex_non_hierarchical OK 29: test_approx_edit_dist_pex_hierarchical OK 29: test_approx_edit_dist_pex_non_hierarchical_aho_corasick OK 29: test_approx_edit_dist_pex_non_hierarchical_multi_bfam OK 29: test_find_hamming_simple OK 29: test_pattern_copycon OK 29: test_pattern_assign OK 29: test_pattern_movecon OK 29: test_pattern_moveassign OK 29: test_pattern_set_host OK 29: ************************************** 29: Total Tests: 39 29: Skipped: 0 29: Errors: 0 29: ************************************** 51: TEST SUITE tests 51: SEQAN_ENABLE_DEBUG == 1 51: SEQAN_ENABLE_TESTING == 1 51: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 51: SEQAN_ASYNC_IO == 1 49: RankDictionaryTest_ClearEmpty type parameter seqan2::RankDictionary, seqan2::Levels, 1u, 1u> > > OK 49: RankDictionaryTest_ClearEmpty type parameter seqan2::RankDictionary, 2u, 2u> > > OK 49: RankDictionaryTest_ClearEmpty type parameter seqan2::RankDictionary, seqan2::Levels, 2u, 2u> > > OK 49: RankDictionaryTest_ClearEmpty type parameter seqan2::RankDictionary, seqan2::Levels, 2u, 2u> > > OK 49: RankDictionaryTest_ClearEmpty type parameter seqan2::RankDictionary, seqan2::Levels, 2u, 2u> > > OK 44/411 Test #29: test_test_find .................................................................... Passed 0.19 sec 49: RankDictionaryTest_ClearEmpty type parameter seqan2::RankDictionary > >, seqan2::Levels, 2u, 2u> > > OK 49: RankDictionaryTest_ClearEmpty type parameter seqan2::RankDictionary, seqan2::Levels, 2u, 2u> > > OK 51: IndexTest_IndexCreate type parameter seqan2::Index, seqan2::Alloc >, seqan2::BidirectionalIndex > > > OK 51: IndexTest_IndexCreate type parameter seqan2::Index, seqan2::Alloc >, seqan2::FMIndex > > OK test 52 Start 52: test_test_index_fm 52: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_index_fm 52: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index 52: Test timeout computed to be: 10000000 49: RankDictionaryTest_ClearEmpty type parameter seqan2::RankDictionary, 3u, 3u> > > OK 49: RankDictionaryTest_ClearEmpty type parameter seqan2::RankDictionary, seqan2::Levels, 3u, 3u> > > OK 49: RankDictionaryTest_ClearEmpty type parameter seqan2::RankDictionary, seqan2::Levels, 3u, 3u> > > OK 49: RankDictionaryTest_ClearEmpty type parameter seqan2::RankDictionary, seqan2::Levels, 3u, 3u> > > OK 49: RankDictionaryTest_ClearEmpty type parameter seqan2::RankDictionary > >, seqan2::Levels, 3u, 3u> > > OK 49: RankDictionaryTest_ClearEmpty type parameter seqan2::RankDictionary, seqan2::Levels, 3u, 3u> > > OK 49: RankDictionaryTest_ClearEmpty type parameter seqan2::RankDictionary, 1u, 1u> > > OK 49: RankDictionaryTest_ClearEmpty type parameter seqan2::RankDictionary, seqan2::Levels, 1u, 1u> > > OK 49: RankDictionaryTest_ClearEmpty type parameter seqan2::RankDictionary, seqan2::Levels, 1u, 1u> > > OK 49: RankDictionaryTest_ClearEmpty type parameter seqan2::RankDictionary, seqan2::Levels, 1u, 1u> > > OK 49: RankDictionaryTest_ClearEmpty type parameter seqan2::RankDictionary > >, seqan2::Levels, 1u, 1u> > > OK 49: RankDictionaryTest_ClearEmpty type parameter seqan2::RankDictionary, seqan2::Levels, 1u, 1u> > > OK 49: RankDictionaryTest_ClearEmpty type parameter seqan2::RankDictionary, 2u, 2u> > > OK 49: RankDictionaryTest_ClearEmpty type parameter seqan2::RankDictionary, seqan2::Levels, 2u, 2u> > > OK 49: RankDictionaryTest_ClearEmpty type parameter seqan2::RankDictionary, seqan2::Levels, 2u, 2u> > > OK 49: RankDictionaryTest_ClearEmpty type parameter seqan2::RankDictionary, seqan2::Levels, 2u, 2u> > > OK 49: RankDictionaryTest_ClearEmpty type parameter seqan2::RankDictionary > >, seqan2::Levels, 2u, 2u> > > OK 49: RankDictionaryTest_ClearEmpty type parameter seqan2::RankDictionary, seqan2::Levels, 2u, 2u> > > OK 49: RankDictionaryTest_ClearEmpty type parameter seqan2::RankDictionary, 3u, 3u> > > OK 49: RankDictionaryTest_ClearEmpty type parameter seqan2::RankDictionary, seqan2::Levels, 3u, 3u> > > OK 49: RankDictionaryTest_ClearEmpty type parameter seqan2::RankDictionary, seqan2::Levels, 3u, 3u> > > OK 49: RankDictionaryTest_ClearEmpty type parameter seqan2::RankDictionary, seqan2::Levels, 3u, 3u> > > OK 49: RankDictionaryTest_ClearEmpty type parameter seqan2::RankDictionary > >, seqan2::Levels, 3u, 3u> > > OK 49: RankDictionaryTest_ClearEmpty type parameter seqan2::RankDictionary, seqan2::Levels, 3u, 3u> > > OK 49: RankDictionaryTest_ClearEmpty type parameter seqan2::RankDictionary, 1u, 0u> > > OK 49: RankDictionaryTest_ClearEmpty type parameter seqan2::RankDictionary, seqan2::WaveletTree, 1u, 0u> > > OK 51: IndexTest_IndexCreate type parameter seqan2::Index, seqan2::Packed > >, seqan2::FMIndex > > OK 51: IndexTest_IndexCreate type parameter seqan2::Index, seqan2::Packed > >, seqan2::FMIndex > > OK 51: IndexTest_IndexCreate type parameter seqan2::Index >, seqan2::FMIndex > > OK 28: test_consensus_consensus_alignment_no_contig_ids OK 52: TEST SUITE tests 52: SEQAN_ENABLE_DEBUG == 1 52: SEQAN_ENABLE_TESTING == 1 52: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 52: SEQAN_ASYNC_IO == 1 52: LFTest_IsSentinel type parameter seqan2::Index, seqan2::Alloc >, seqan2::FMIndex > > OK 52: LFTest_IsSentinel type parameter seqan2::Index >, seqan2::FMIndex > > OK 33: test_graph_msa_guide_tree_upgma_max OK 49: RankDictionaryTest_ClearEmpty type parameter seqan2::RankDictionary, seqan2::WaveletTree, 1u, 0u> > > OK 49: RankDictionaryTest_ClearEmpty type parameter seqan2::RankDictionary, seqan2::WaveletTree, 1u, 0u> > > OK 33: test_distances OK 49: RankDictionaryTest_ClearEmpty type parameter seqan2::RankDictionary > >, seqan2::WaveletTree, 1u, 0u> > > OK 49: RankDictionaryTest_ClearEmpty type parameter seqan2::RankDictionary, seqan2::WaveletTree, 1u, 0u> > > OK 49: RankDictionaryTest_GetValue type parameter seqan2::RankDictionary, 1u, 1u> > > OK 33: test_libraries OK 33: test_external_libraries OK 33: test_triplet_extension OK 33: test_sop OK 33: test_progressive OK 33: test_reversable_fragments OK 33: ************************************** 33: Total Tests: 12 33: Skipped: 0 33: Errors: 0 33: ************************************** 45/411 Test #33: test_test_graph_msa ............................................................... Passed 0.17 sec test 53 Start 53: test_test_index_bifm 53: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_index_bifm 53: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index 53: Test timeout computed to be: 10000000 49: RankDictionaryTest_GetValue type parameter seqan2::RankDictionary, 1u, 1u> > > OK 49: RankDictionaryTest_GetValue type parameter seqan2::RankDictionary, seqan2::Levels, 1u, 1u> > > OK 49: RankDictionaryTest_GetValue type parameter seqan2::RankDictionary, seqan2::Levels, 1u, 1u> > > OK 49: RankDictionaryTest_GetValue type parameter seqan2::RankDictionary, seqan2::Levels, 1u, 1u> > > OK 49: RankDictionaryTest_GetValue type parameter seqan2::RankDictionary > >, seqan2::Levels, 1u, 1u> > > OK 49: RankDictionaryTest_GetValue type parameter seqan2::RankDictionary, seqan2::Levels, 1u, 1u> > > OK 49: RankDictionaryTest_GetValue type parameter seqan2::RankDictionary, 2u, 2u> > > OK 49: RankDictionaryTest_GetValue type parameter seqan2::RankDictionary, seqan2::Levels, 2u, 2u> > > OK 49: RankDictionaryTest_GetValue type parameter seqan2::RankDictionary, seqan2::Levels, 2u, 2u> > > OK 49: RankDictionaryTest_GetValue type parameter seqan2::RankDictionary, seqan2::Levels, 2u, 2u> > > OK 49: RankDictionaryTest_GetValue type parameter seqan2::RankDictionary > >, seqan2::Levels, 2u, 2u> > > OK 49: RankDictionaryTest_GetValue type parameter seqan2::RankDictionary, seqan2::Levels, 2u, 2u> > > OK 49: RankDictionaryTest_GetValue type parameter seqan2::RankDictionary, 3u, 3u> > > OK 49: RankDictionaryTest_GetValue type parameter seqan2::RankDictionary, seqan2::Levels, 3u, 3u> > > OK 49: RankDictionaryTest_GetValue type parameter seqan2::RankDictionary, seqan2::Levels, 3u, 3u> > > OK 49: RankDictionaryTest_GetValue type parameter seqan2::RankDictionary, seqan2::Levels, 3u, 3u> > > OK 49: RankDictionaryTest_GetValue type parameter seqan2::RankDictionary > >, seqan2::Levels, 3u, 3u> > > OK 49: RankDictionaryTest_GetValue type parameter seqan2::RankDictionary, seqan2::Levels, 3u, 3u> > > OK 49: RankDictionaryTest_GetValue type parameter seqan2::RankDictionary, 1u, 1u> > > OK 49: RankDictionaryTest_GetValue type parameter seqan2::RankDictionary, seqan2::Levels, 1u, 1u> > > OK 49: RankDictionaryTest_GetValue type parameter seqan2::RankDictionary, seqan2::Levels, 1u, 1u> > > OK 49: RankDictionaryTest_GetValue type parameter seqan2::RankDictionary, seqan2::Levels, 1u, 1u> > > OK 49: RankDictionaryTest_GetValue type parameter seqan2::RankDictionary > >, seqan2::Levels, 1u, 1u> > > OK 49: RankDictionaryTest_GetValue type parameter seqan2::RankDictionary, seqan2::Levels, 1u, 1u> > > OK 49: RankDictionaryTest_GetValue type parameter seqan2::RankDictionary, 2u, 2u> > > OK 28: test_consensus_consensus_alignment_global_alignment OK 28: ************************************** 28: Total Tests: 4 28: Skipped: 0 28: Errors: 0 28: ************************************** 46/411 Test #28: test_test_consensus_v2 ............................................................ Passed 0.23 sec 53: TEST SUITE tests 53: SEQAN_ENABLE_DEBUG == 1 53: SEQAN_ENABLE_TESTING == 1 53: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 53: SEQAN_ASYNC_IO == 1 test 54 Start 54: test_test_index_vstree 54: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_index_vstree 54: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index 54: Test timeout computed to be: 10000000 49: RankDictionaryTest_GetValue type parameter seqan2::RankDictionary, seqan2::Levels, 2u, 2u> > > OK 49: RankDictionaryTest_GetValue type parameter seqan2::RankDictionary, seqan2::Levels, 2u, 2u> > > OK 49: RankDictionaryTest_GetValue type parameter seqan2::RankDictionary, seqan2::Levels, 2u, 2u> > > OK 49: RankDictionaryTest_GetValue type parameter seqan2::RankDictionary > >, seqan2::Levels, 2u, 2u> > > OK 49: RankDictionaryTest_GetValue type parameter seqan2::RankDictionary, seqan2::Levels, 2u, 2u> > > OK 49: RankDictionaryTest_GetValue type parameter seqan2::RankDictionary, 3u, 3u> > > OK 49: RankDictionaryTest_GetValue type parameter seqan2::RankDictionary, seqan2::Levels, 3u, 3u> > > OK 49: RankDictionaryTest_GetValue type parameter seqan2::RankDictionary, seqan2::Levels, 3u, 3u> > > OK 49: RankDictionaryTest_GetValue type parameter seqan2::RankDictionary, seqan2::Levels, 3u, 3u> > > OK 49: RankDictionaryTest_GetValue type parameter seqan2::RankDictionary > >, seqan2::Levels, 3u, 3u> > > OK 49: RankDictionaryTest_GetValue type parameter seqan2::RankDictionary, seqan2::Levels, 3u, 3u> > > OK 49: RankDictionaryTest_GetValue type parameter seqan2::RankDictionary, 1u, 0u> > > OK 54: TEST SUITE tests 54: SEQAN_ENABLE_DEBUG == 1 54: SEQAN_ENABLE_TESTING == 1 54: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 54: SEQAN_ASYNC_IO == 1 49: RankDictionaryTest_GetValue type parameter seqan2::RankDictionary, seqan2::WaveletTree, 1u, 0u> > > OK 54: TopDownIndexIteratorTest_Constructor type parameter seqan2::Index, seqan2::Alloc >, seqan2::BidirectionalIndex > > > OK 54: TopDownIndexIteratorTest_Constructor type parameter seqan2::Index, seqan2::Alloc >, seqan2::FMIndex > > OK 54: TopDownIndexIteratorTest_Constructor type parameter seqan2::Index, seqan2::Packed > >, seqan2::FMIndex > > OK 54: TopDownIndexIteratorTest_Constructor type parameter seqan2::Index, seqan2::Packed > >, seqan2::FMIndex > > OK 54: TopDownIndexIteratorTest_Constructor type parameter seqan2::Index >, seqan2::FMIndex > > OK 49: RankDictionaryTest_GetValue type parameter seqan2::RankDictionary, seqan2::WaveletTree, 1u, 0u> > > OK 49: RankDictionaryTest_GetValue type parameter seqan2::RankDictionary, seqan2::WaveletTree, 1u, 0u> > > OK 49: RankDictionaryTest_GetValue type parameter seqan2::RankDictionary > >, seqan2::WaveletTree, 1u, 0u> > > OK 49: RankDictionaryTest_GetValue type parameter seqan2::RankDictionary, seqan2::WaveletTree, 1u, 0u> > > OK 49: RankDictionaryTest_GetRank type parameter seqan2::RankDictionary, 1u, 1u> > > OK 49: RankDictionaryTest_GetRank type parameter seqan2::RankDictionary, 1u, 1u> > > OK 49: RankDictionaryTest_GetRank type parameter seqan2::RankDictionary, seqan2::Levels, 1u, 1u> > > OK 49: RankDictionaryTest_GetRank type parameter seqan2::RankDictionary, seqan2::Levels, 1u, 1u> > > OK 49: RankDictionaryTest_GetRank type parameter seqan2::RankDictionary, seqan2::Levels, 1u, 1u> > > OK 49: RankDictionaryTest_GetRank type parameter seqan2::RankDictionary > >, seqan2::Levels, 1u, 1u> > > OK 49: RankDictionaryTest_GetRank type parameter seqan2::RankDictionary, seqan2::Levels, 1u, 1u> > > OK 49: RankDictionaryTest_GetRank type parameter seqan2::RankDictionary, 2u, 2u> > > OK 49: RankDictionaryTest_GetRank type parameter seqan2::RankDictionary, seqan2::Levels, 2u, 2u> > > OK 49: RankDictionaryTest_GetRank type parameter seqan2::RankDictionary, seqan2::Levels, 2u, 2u> > > OK 49: RankDictionaryTest_GetRank type parameter seqan2::RankDictionary, seqan2::Levels, 2u, 2u> > > OK 40: testIndexCreation OK 40: ************************************** 40: Total Tests: 6 40: Skipped: 0 40: Errors: 0 40: ************************************** 49: RankDictionaryTest_GetRank type parameter seqan2::RankDictionary > >, seqan2::Levels, 2u, 2u> > > OK 47/411 Test #40: test_test_index_creation .......................................................... Passed 0.18 sec test 55 Start 55: test_test_index_stree_iterators 55: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_index_stree_iterators 55: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index 55: Test timeout computed to be: 10000000 49: RankDictionaryTest_GetRank type parameter seqan2::RankDictionary, seqan2::Levels, 2u, 2u> > > OK 49: RankDictionaryTest_GetRank type parameter seqan2::RankDictionary, 3u, 3u> > > OK 49: RankDictionaryTest_GetRank type parameter seqan2::RankDictionary, seqan2::Levels, 3u, 3u> > > OK 49: RankDictionaryTest_GetRank type parameter seqan2::RankDictionary, seqan2::Levels, 3u, 3u> > > OK 55: TEST SUITE test_index 55: SEQAN_ENABLE_DEBUG == 1 55: SEQAN_ENABLE_TESTING == 1 55: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 55: SEQAN_ASYNC_IO == 1 55: testEmptyIndex OK 49: RankDictionaryTest_GetRank type parameter seqan2::RankDictionary, seqan2::Levels, 3u, 3u> > > OK 49: RankDictionaryTest_GetRank type parameter seqan2::RankDictionary > >, seqan2::Levels, 3u, 3u> > > OK 55: testIssue509 OK 55: testIssue509b OK 55: goDownOnEmptyString OK 55: bidirectionalGoDownStringHistory OK 55: parentEdgeLabel: 55: a parentEdgeLabel: a 55: aa parentEdgeLabel: a 55: aaacatatz parentEdgeLabel: acatatz 55: aacatatz parentEdgeLabel: catatz 55: aca parentEdgeLabel: ca 55: acaaacatatz parentEdgeLabel: aacatatz 55: acatatz parentEdgeLabel: tatz 55: at parentEdgeLabel: t 55: atatz parentEdgeLabel: atz 55: atz parentEdgeLabel: z 55: ca parentEdgeLabel: ca 55: caaacatatz parentEdgeLabel: aacatatz 55: catatz parentEdgeLabel: tatz 55: t parentEdgeLabel: t 55: tatz parentEdgeLabel: atz 55: tz parentEdgeLabel: z 55: z parentEdgeLabel: z 55: 55: Dir (wotd) 55: 0: 0 (LastChild/SENTINELS) 55: 1: 2 55: 2: 0 55: 3: 9 55: 4: 6 55: 5: 21 55: 6: 8 55: 7: 23 55: 8: 10 (Leaf/Uneval) (LastChild/SENTINELS) 55: 9: 1 55: 10: 15 55: 11: 2 55: 12: 17 55: 13: 4 (LastChild/SENTINELS) 55: 14: 19 55: 15: 2 (Leaf/Uneval) 55: 16: 1 (Leaf/Uneval) (LastChild/SENTINELS) 55: 17: 3 (Leaf/Uneval) 55: 18: 3 (Leaf/Uneval) (LastChild/SENTINELS) 55: 19: 2 (Leaf/Uneval) 55: 20: 5 (Leaf/Uneval) (LastChild/SENTINELS) 55: 21: 2 (Leaf/Uneval) 55: 22: 7 (Leaf/Uneval) (LastChild/SENTINELS) 55: 23: 1 (Leaf/Uneval) 55: 24: 9 (Leaf/Uneval) (LastChild/SENTINELS) 55: 55: SA 55: 0: 2 aaacatatz 55: 1: 3 aacatatz 55: 2: 0 acaaacatatz 55: 3: 4 acatatz 55: 4: 6 atatz 55: 5: 8 atz 55: 6: 1 caaacatatz 55: 7: 5 catatz 55: 8: 7 tatz 55: 9: 9 tz 55: 10: 10 z 55: 55: testSTreeIterators_Wotd OK 55: parentEdgeLabel: 55: a parentEdgeLabel: a 55: aca parentEdgeLabel: ca 55: acaaacatatz parentEdgeLabel: aacatatz 55: acatatz parentEdgeLabel: tatz 55: aa parentEdgeLabel: a 55: aaacatatz parentEdgeLabel: acatatz 55: aacatatz parentEdgeLabel: catatz 55: at parentEdgeLabel: t 55: atatz parentEdgeLabel: atz 55: atz parentEdgeLabel: z 55: ca parentEdgeLabel: ca 55: caaacatatz parentEdgeLabel: aacatatz 55: catatz parentEdgeLabel: tatz 55: t parentEdgeLabel: t 55: tatz parentEdgeLabel: atz 55: tz parentEdgeLabel: z 55: z parentEdgeLabel: z 55: 55: Dir (wotd) 55: 0: 0 (LastChild/SENTINELS) 55: 1: 2 55: 2: 0 55: 3: 9 55: 4: 1 55: 5: 21 55: 6: 7 55: 7: 23 55: 8: 10 (Leaf/Uneval) (LastChild/SENTINELS) 55: 9: 1 55: 10: 15 55: 11: 3 55: 12: 17 55: 13: 7 (LastChild/SENTINELS) 55: 14: 19 55: 15: 3 (Leaf/Uneval) 55: 16: 7 (Leaf/Uneval) (LastChild/SENTINELS) 55: 17: 4 (Leaf/Uneval) 55: 18: 5 (Leaf/Uneval) (LastChild/SENTINELS) 55: 19: 8 (Leaf/Uneval) 55: 20: 10 (Leaf/Uneval) (LastChild/SENTINELS) 55: 21: 3 (Leaf/Uneval) 55: 22: 7 (Leaf/Uneval) (LastChild/SENTINELS) 55: 23: 8 (Leaf/Uneval) 55: 24: 10 (Leaf/Uneval) (LastChild/SENTINELS) 55: 55: SA 55: 0: 4 acatatz 55: 1: 5 catatz 55: 2: 3 aacatatz 55: 3: 7 tatz 55: 4: 8 atz 55: 5: 10 z 55: 6: 3 aacatatz 55: 7: 7 tatz 55: 8: 8 atz 55: 9: 10 z 55: 10: 10 z 55: 55: testSTreeIterators_WotdOriginal OK 55: parentEdgeLabel: 55: a parentEdgeLabel: a 55: aa parentEdgeLabel: a 55: aaacatatz parentEdgeLabel: acatatz 55: aacatatz parentEdgeLabel: catatz 55: aca parentEdgeLabel: ca 55: acaaacatatz parentEdgeLabel: aacatatz 55: acatatz parentEdgeLabel: tatz 55: at parentEdgeLabel: t 55: atatz parentEdgeLabel: atz 55: atz parentEdgeLabel: z 55: ca parentEdgeLabel: ca 55: caaacatatz parentEdgeLabel: aacatatz 55: catatz parentEdgeLabel: tatz 55: t parentEdgeLabel: t 55: tatz parentEdgeLabel: atz 55: tz parentEdgeLabel: z 55: z parentEdgeLabel: z 55: 55: SA 55: 0: 2 aaacatatz 55: 1: 3 aacatatz 55: 2: 0 acaaacatatz 55: 3: 4 acatatz 55: 4: 6 atatz 55: 5: 8 atz 55: 6: 1 caaacatatz 55: 7: 5 catatz 55: 8: 7 tatz 55: 9: 9 tz 55: 10: 10 z 55: 55: LCP 55: 0: 2 55: 1: 1 55: 2: 3 55: 3: 1 55: 4: 2 55: 5: 0 55: 6: 2 55: 7: 0 55: 8: 1 55: 9: 0 55: 10: 0 55: 55: Childtab 55: 0: 6 55: 1: 1 55: 2: 4 55: 3: 3 55: 4: 5 55: 5: 2 55: 6: 8 55: 7: 7 55: 8: 10 55: 9: 9 55: 10: 11 55: 55: testSTreeIterators_Esa OK 55: goDown 55: parent: < 0 , 18446744073709551615 > 55: char: < b , b > 55: child: < 0 , 2 > 55: parent: < 0 , 2 > 55: child: < 0 , 2 > 55: goDown 55: parent: < 0 , 2 > 55: char: < j , m > 55: child: < 0 , 1 > 55: testTrieIterator OK 55: testRadixTreeIterator OK 55: testFind_Esa_Mlr OK 55: testCompareIndices_Esa_Wotd OK 55: BottomUp without empty edges 55: 1 AC 55: 2 AC 55: 1 C 55: 2 C 55: 55: BottomUp with empty edges 55: 1 AC 55: 1 AC 55: 2 AC 55: 1 C 55: 1 C 55: 2 C 55: 55: TopDown postorder without empty edges 55: 2 AC 55: 2 C 55: 4 55: 55: TopDown postorder with empty edges 55: 1 AC 55: 1 AC 55: 2 AC 55: 1 C 55: 1 C 55: 2 C 55: 4 55: 55: TopDown preorder without empty edges 55: 2 C 55: 55: TopDown preorder with empty edges 55: 4 55: 2 AC 55: 1 AC 55: 1 AC 55: 2 C 55: 1 C 55: 1 C 55: 55: TopDown with empty edges 55: 4 55: 2 AC 55: 55: TopDown with empty edges 55: 4 55: 2 AC 55: 1 AC 55: testMultiIndex OK 55: testMUMs OK 55: testMaxRepeats OK 55: testSuperMaxRepeats OK 55: testSuperMaxRepeatsFast OK 55: testMultipleStrings_Ticket1109 OK 55: ************************************** 55: Total Tests: 18 55: Skipped: 0 55: Errors: 0 55: ************************************** 48/411 Test #55: test_test_index_stree_iterators ................................................... Passed 0.01 sec test 56 Start 56: test_test_index_view 56: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_index_view 56: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index 56: Test timeout computed to be: 10000000 49: RankDictionaryTest_GetRank type parameter seqan2::RankDictionary, seqan2::Levels, 3u, 3u> > > OK 49: RankDictionaryTest_GetRank type parameter seqan2::RankDictionary, 1u, 1u> > > OK 49: RankDictionaryTest_GetRank type parameter seqan2::RankDictionary, seqan2::Levels, 1u, 1u> > > OK 49: RankDictionaryTest_GetRank type parameter seqan2::RankDictionary, seqan2::Levels, 1u, 1u> > > OK 49: RankDictionaryTest_GetRank type parameter seqan2::RankDictionary, seqan2::Levels, 1u, 1u> > > OK 49: RankDictionaryTest_GetRank type parameter seqan2::RankDictionary > >, seqan2::Levels, 1u, 1u> > > OK 56: TEST SUITE test_index_view 56: SEQAN_ENABLE_DEBUG == 1 56: SEQAN_ENABLE_TESTING == 1 56: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 56: SEQAN_ASYNC_IO == 1 56: test_index_view_basic OK 56: ************************************** 56: Total Tests: 1 56: Skipped: 0 56: Errors: 0 56: ************************************** 49/411 Test #56: test_test_index_view .............................................................. Passed 0.01 sec 49: RankDictionaryTest_GetRank type parameter seqan2::RankDictionary, seqan2::Levels, 1u, 1u> > > OK test 57 Start 57: test_test_index_finder 57: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_index_finder 57: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index 57: Test timeout computed to be: 10000000 49: RankDictionaryTest_GetRank type parameter seqan2::RankDictionary, 2u, 2u> > > OK 49: RankDictionaryTest_GetRank type parameter seqan2::RankDictionary, seqan2::Levels, 2u, 2u> > > OK 49: RankDictionaryTest_GetRank type parameter seqan2::RankDictionary, seqan2::Levels, 2u, 2u> > > OK 49: RankDictionaryTest_GetRank type parameter seqan2::RankDictionary, seqan2::Levels, 2u, 2u> > > OK 49: RankDictionaryTest_GetRank type parameter seqan2::RankDictionary > >, seqan2::Levels, 2u, 2u> > > OK 57: TEST SUITE tests 57: SEQAN_ENABLE_DEBUG == 1 57: SEQAN_ENABLE_TESTING == 1 57: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 57: SEQAN_ASYNC_IO == 1 57: IndexFinderTest_FindFirstChar type parameter seqan2::Index >, seqan2::IndexSa > OK 57: IndexFinderTest_FindFirstChar type parameter seqan2::Index >, seqan2::IndexEsa > OK 57: IndexFinderTest_FindFirstChar type parameter seqan2::Index, seqan2::Alloc >, seqan2::FMIndex > > OK 57: IndexFinderTest_FindFirstChar type parameter seqan2::Index, seqan2::Packed > >, seqan2::FMIndex > > OK 57: IndexFinderTest_FindFirstChar type parameter seqan2::Index, seqan2::Packed > >, seqan2::FMIndex > > OK 57: IndexFinderTest_FindFirstChar type parameter seqan2::Index >, seqan2::FMIndex > > OK 49: RankDictionaryTest_GetRank type parameter seqan2::RankDictionary, seqan2::Levels, 2u, 2u> > > OK 49: RankDictionaryTest_GetRank type parameter seqan2::RankDictionary, 3u, 3u> > > OK 49: RankDictionaryTest_GetRank type parameter seqan2::RankDictionary, seqan2::Levels, 3u, 3u> > > OK 49: RankDictionaryTest_GetRank type parameter seqan2::RankDictionary, seqan2::Levels, 3u, 3u> > > OK 49: RankDictionaryTest_GetRank type parameter seqan2::RankDictionary, seqan2::Levels, 3u, 3u> > > OK 53: BidirectionalFMIndexTest_SearchInString type parameter seqan2::Index >, seqan2::BidirectionalIndex > > > OK 49: RankDictionaryTest_GetRank type parameter seqan2::RankDictionary > >, seqan2::Levels, 3u, 3u> > > OK 49: RankDictionaryTest_GetRank type parameter seqan2::RankDictionary, seqan2::Levels, 3u, 3u> > > OK 49: RankDictionaryTest_GetRank type parameter seqan2::RankDictionary, 1u, 0u> > > OK 49: RankDictionaryTest_GetRank type parameter seqan2::RankDictionary, seqan2::WaveletTree, 1u, 0u> > > OK 49: RankDictionaryTest_GetRank type parameter seqan2::RankDictionary, seqan2::WaveletTree, 1u, 0u> > > OK 49: RankDictionaryTest_GetRank type parameter seqan2::RankDictionary, seqan2::WaveletTree, 1u, 0u> > > OK 49: RankDictionaryTest_GetRank type parameter seqan2::RankDictionary > >, seqan2::WaveletTree, 1u, 0u> > > OK 51: IndexTest_IndexCreate type parameter seqan2::Index, seqan2::Alloc >, seqan2::Owner > >, seqan2::FMIndex > > OK 49: RankDictionaryTest_GetRank type parameter seqan2::RankDictionary, seqan2::WaveletTree, 1u, 0u> > > OK 49: RankDictionaryPrefixTest_GetPrefixRank type parameter seqan2::RankDictionary, 1u, 1u> > > OK 49: RankDictionaryPrefixTest_GetPrefixRank type parameter seqan2::RankDictionary, seqan2::Levels, 1u, 1u> > > OK 49: RankDictionaryPrefixTest_GetPrefixRank type parameter seqan2::RankDictionary, seqan2::Levels, 1u, 1u> > > OK 49: RankDictionaryPrefixTest_GetPrefixRank type parameter seqan2::RankDictionary, seqan2::Levels, 1u, 1u> > > OK 49: RankDictionaryPrefixTest_GetPrefixRank type parameter seqan2::RankDictionary > >, seqan2::Levels, 1u, 1u> > > OK 49: RankDictionaryPrefixTest_GetPrefixRank type parameter seqan2::RankDictionary, seqan2::Levels, 1u, 1u> > > OK 49: RankDictionaryPrefixTest_GetPrefixRank type parameter seqan2::RankDictionary, 2u, 2u> > > OK 49: RankDictionaryPrefixTest_GetPrefixRank type parameter seqan2::RankDictionary, seqan2::Levels, 2u, 2u> > > OK 49: RankDictionaryPrefixTest_GetPrefixRank type parameter seqan2::RankDictionary, seqan2::Levels, 2u, 2u> > > OK 49: RankDictionaryPrefixTest_GetPrefixRank type parameter seqan2::RankDictionary, seqan2::Levels, 2u, 2u> > > OK 49: RankDictionaryPrefixTest_GetPrefixRank type parameter seqan2::RankDictionary > >, seqan2::Levels, 2u, 2u> > > OK 53: BidirectionalFMIndexTest_SearchInString type parameter seqan2::Index, seqan2::Alloc >, seqan2::BidirectionalIndex > > > OK 49: RankDictionaryPrefixTest_GetPrefixRank type parameter seqan2::RankDictionary, seqan2::Levels, 2u, 2u> > > OK 49: RankDictionaryPrefixTest_GetPrefixRank type parameter seqan2::RankDictionary, 3u, 3u> > > OK 49: RankDictionaryPrefixTest_GetPrefixRank type parameter seqan2::RankDictionary, seqan2::Levels, 3u, 3u> > > OK 49: RankDictionaryPrefixTest_GetPrefixRank type parameter seqan2::RankDictionary, seqan2::Levels, 3u, 3u> > > OK 52: LFTest_IsSentinel type parameter seqan2::Index >, seqan2::Owner > >, seqan2::FMIndex > > OK 49: RankDictionaryPrefixTest_GetPrefixRank type parameter seqan2::RankDictionary, seqan2::Levels, 3u, 3u> > > OK 49: RankDictionaryPrefixTest_GetPrefixRank type parameter seqan2::RankDictionary > >, seqan2::Levels, 3u, 3u> > > OK 49: RankDictionaryPrefixTest_GetPrefixRank type parameter seqan2::RankDictionary, seqan2::Levels, 3u, 3u> > > OK 49: RankDictionaryPrefixTest_GetPrefixRank type parameter seqan2::RankDictionary, 1u, 0u> > > OK 49: RankDictionaryPrefixTest_GetPrefixRank type parameter seqan2::RankDictionary, seqan2::WaveletTree, 1u, 0u> > > OK 49: RankDictionaryPrefixTest_GetPrefixRank type parameter seqan2::RankDictionary, seqan2::WaveletTree, 1u, 0u> > > OK 49: RankDictionaryPrefixTest_GetPrefixRank type parameter seqan2::RankDictionary, seqan2::WaveletTree, 1u, 0u> > > OK 49: RankDictionaryPrefixTest_GetPrefixRank type parameter seqan2::RankDictionary > >, seqan2::WaveletTree, 1u, 0u> > > OK 54: TopDownIndexIteratorTest_Constructor type parameter seqan2::Index, seqan2::Alloc >, seqan2::Owner > >, seqan2::FMIndex > > OK 49: RankDictionaryPrefixTest_GetPrefixRank type parameter seqan2::RankDictionary, seqan2::WaveletTree, 1u, 0u> > > OK 49: ************************************** 49: Total Tests: 239 49: Skipped: 0 49: Errors: 0 49: ************************************** 50/411 Test #49: test_test_index_fm_rank_dictionary ................................................ Passed 0.27 sec test 58 Start 58: test_test_find_backtracking 58: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_find_backtracking 58: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index 58: Test timeout computed to be: 10000000 58: TEST SUITE test_find_backtracking_exp 58: SEQAN_ENABLE_DEBUG == 1 58: SEQAN_ENABLE_TESTING == 1 58: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 58: SEQAN_ASYNC_IO == 1 58: test_find_backtracking_multiple_hamming_banana_vs_ada_ana OK 58: test_find_backtracking_multiple_edit_banana_vs_ada_ana OK 58: ************************************** 58: Total Tests: 2 58: Skipped: 0 58: Errors: 0 58: ************************************** 51/411 Test #58: test_test_find_backtracking ....................................................... Passed 0.01 sec test 59 Start 59: test_test_index_repeats 59: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_index_repeats 59: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index 59: Test timeout computed to be: 10000000 59: TEST SUITE test_index_repeats 59: SEQAN_ENABLE_DEBUG == 1 59: SEQAN_ENABLE_TESTING == 1 59: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 59: SEQAN_ASYNC_IO == 1 59: test_index_repeats_period_1_ignore_minlen_for_ns OK 53: BidirectionalFMIndexTest_SearchInString type parameter seqan2::Index, seqan2::Alloc >, seqan2::BidirectionalIndex > > > OK 59: test_index_repeats_period_1_no_ns OK 59: test_index_repeats_period_1_many_ns OK 59: ************************************** 59: Total Tests: 3 59: Skipped: 0 59: Errors: 0 59: ************************************** 8: test_alignment_free_alignment_free_comparison OK 8: test_alignment_free_count_kmers OK 8: test_alignment_free_calculate_periodicity OK 8: test_alignment_free_calculate_overlap_indicator OK 8: test_alignment_free_string_to_string_set OK 8: test_alignment_free_cut_ns OK 8: ************************************** 8: Total Tests: 14 8: Skipped: 0 8: Errors: 0 8: ************************************** 52/411 Test #8: test_test_alignment_free .......................................................... Passed 0.56 sec test 60 Start 60: test_test_find2_index_approx 60: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_find2_index_approx 60: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index 60: Test timeout computed to be: 10000000 60: TEST SUITE test_find_index_approx 60: SEQAN_ENABLE_DEBUG == 1 60: SEQAN_ENABLE_TESTING == 1 60: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 60: SEQAN_ASYNC_IO == 1 53/411 Test #59: test_test_index_repeats ........................................................... Passed 0.03 sec test 61 Start 61: test_test_index_swift 61: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_index_swift 61: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/index 61: Test timeout computed to be: 10000000 61: TEST SUITE test_index_swift 61: SEQAN_ENABLE_DEBUG == 1 61: SEQAN_ENABLE_TESTING == 1 61: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 61: SEQAN_ASYNC_IO == 1 61: test_index_swift_find_empty_pattern OK 61: test_index_swift_edge_case_hash_collision OK 61: ************************************** 61: Total Tests: 2 61: Skipped: 0 61: Errors: 0 61: ************************************** 54/411 Test #61: test_test_index_swift ............................................................. Passed 0.01 sec test 62 Start 62: test_test_journaled_set 62: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_journaled_set 62: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/journaled_set 62: Test timeout computed to be: 10000000 62: TEST SUITE test_journaled_set 62: SEQAN_ENABLE_DEBUG == 1 62: SEQAN_ENABLE_TESTING == 1 62: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 62: SEQAN_ASYNC_IO == 1 62: test_journaled_set_constructor OK 62: test_journaled_set_assign OK 62: test_journaled_set_set_host OK 62: test_journaled_set_host OK 62: test_journaled_set_assign_value OK 62: test_journaled_set_append_value OK 62: test_journaled_set_value OK 62: test_journaled_set_clear OK 62: test_journaled_set_resize OK 62: test_journaled_set_empty OK 62: test_journaled_set_iterator OK 62: ************************************** 62: Total Tests: 11 62: Skipped: 0 62: Errors: 0 62: ************************************** 55/411 Test #62: test_test_journaled_set ........................................................... Passed 0.00 sec test 63 Start 63: test_test_basic_observable 63: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_basic_observable 63: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/journaled_string_tree 63: Test timeout computed to be: 10000000 51: IndexTest_IndexCreate type parameter seqan2::Index >, seqan2::Owner > >, seqan2::FMIndex > > OK 51: IndexTest_Length type parameter seqan2::Index, seqan2::Alloc >, seqan2::BidirectionalIndex > > > OK 51: IndexTest_Length type parameter seqan2::Index, seqan2::Alloc >, seqan2::FMIndex > > OK 51: IndexTest_Length type parameter seqan2::Index, seqan2::Packed > >, seqan2::FMIndex > > OK 51: IndexTest_Length type parameter seqan2::Index, seqan2::Packed > >, seqan2::FMIndex > > OK 51: IndexTest_Length type parameter seqan2::Index >, seqan2::FMIndex > > OK 51: IndexTest_Length type parameter seqan2::Index, seqan2::Alloc >, seqan2::Owner > >, seqan2::FMIndex > > OK 51: IndexTest_Length type parameter seqan2::Index >, seqan2::Owner > >, seqan2::FMIndex > > OK 51: IndexTest_ClearEmpty type parameter seqan2::Index, seqan2::Alloc >, seqan2::BidirectionalIndex > > > OK 51: IndexTest_ClearEmpty type parameter seqan2::Index, seqan2::Alloc >, seqan2::FMIndex > > OK 51: IndexTest_ClearEmpty type parameter seqan2::Index, seqan2::Packed > >, seqan2::FMIndex > > OK 51: IndexTest_ClearEmpty type parameter seqan2::Index, seqan2::Packed > >, seqan2::FMIndex > > OK 51: IndexTest_ClearEmpty type parameter seqan2::Index >, seqan2::FMIndex > > OK 63: TEST SUITE test_basic_observable 63: SEQAN_ENABLE_DEBUG == 1 63: SEQAN_ENABLE_TESTING == 1 63: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 63: SEQAN_ASYNC_IO == 1 63: test_basic_observable_length OK 63: test_basic_observable_set_observer OK 63: test_basic_observable_notify OK 63: test_basic_observable_make_observer_list OK 63: ************************************** 63: Total Tests: 4 63: Skipped: 0 63: Errors: 0 63: ************************************** 56/411 Test #63: test_test_basic_observable ........................................................ Passed 0.01 sec test 64 Start 64: test_test_journaled_string_tree 64: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_journaled_string_tree 64: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/journaled_string_tree 64: Test timeout computed to be: 10000000 64: TEST SUITE test_journaled_string_tree 64: SEQAN_ENABLE_DEBUG == 1 64: SEQAN_ENABLE_TESTING == 1 64: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 64: SEQAN_ASYNC_IO == 1 64: test_journaled_string_tree_constructor OK 64: test_journaled_string_tree_length OK 64: test_journaled_string_tree_set_host OK 64: test_journaled_string_tree_host OK 64: test_journaled_string_tree_insert OK 64: test_journaled_string_tree_erase OK 64: test_journaled_string_tree_clear OK 64: test_journaled_string_tree_empty OK 64: test_journaled_string_tree_resize OK 64: test_journaled_string_tree_max_size OK 64: test_journaled_string_tree_size OK 64: ************************************** 64: Total Tests: 11 64: Skipped: 0 64: Errors: 0 64: ************************************** 57/411 Test #64: test_test_journaled_string_tree ................................................... Passed 0.00 sec test 65 Start 65: test_test_delta_map 65: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_delta_map 65: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/journaled_string_tree 65: Test timeout computed to be: 10000000 53: BidirectionalFMIndexTest_SearchInString type parameter seqan2::Index >, seqan2::BidirectionalIndex > > > OK 65: TEST SUITE test_delta_map 65: SEQAN_ENABLE_DEBUG == 1 65: SEQAN_ENABLE_TESTING == 1 65: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 65: SEQAN_ASYNC_IO == 1 65: test_delta_map_delta_store_is_delta_type OK 65: test_delta_map_delta_store_select_delta_type OK 65: test_delta_map_delta_store_get_delta_store OK 65: test_delta_map_delta_store_add_delta_value OK 65: test_delta_map_delta_store_erase_delta_value OK 65: test_delta_map_delta_store_delta_value OK 65: test_delta_map_delta_store_clear OK 65: test_delta_map_delta_store_deletion_size OK 65: test_delta_map_delta_store_insertion_size OK 65: test_delta_map_delta_store_net_size OK 65: test_delta_map_insert OK 65: test_delta_map_erase OK 65: test_delta_map_lower_bound OK 65: test_delta_map_upper_bound OK 65: test_delta_map_count OK 65: test_delta_map_equal_range OK 65: test_delta_map_find OK 65: test_delta_map_size OK 65: test_delta_map_empty OK 65: test_delta_map_iterator OK 65: test_delta_map_iterator_copy_constructor OK 65: test_delta_map_iterator_assign OK 65: test_delta_map_iterator_value OK 65: test_delta_map_iterator_delta_value OK 65: test_delta_map_entry_delta_coverage OK 65: test_delta_map_entry_delta_type OK 65: test_delta_map_entry_delta_position OK 65: ************************************** 65: Total Tests: 27 65: Skipped: 0 65: Errors: 0 65: ************************************** 58/411 Test #65: test_test_delta_map ............................................................... Passed 0.01 sec test 66 Start 66: test_journaled_string_tree_traverser 66: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_journaled_string_tree_traverser 66: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/journaled_string_tree 66: Test timeout computed to be: 10000000 66: TEST SUITE test_journaled_string_tree_traverser 66: SEQAN_ENABLE_DEBUG == 1 66: SEQAN_ENABLE_TESTING == 1 66: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 66: SEQAN_ASYNC_IO == 1 66: test_journaled_string_tree_traverser_constructor OK 66: test_journaled_string_tree_traverser_traverser OK 57: IndexFinderTest_FindFirstChar type parameter seqan2::Index, seqan2::Alloc >, seqan2::Owner > >, seqan2::FMIndex > > OK 52: LFTest_IsSentinel type parameter seqan2::Index >, seqan2::Owner > >, seqan2::FMIndex > > OK 66: test_journaled_string_tree_traverser_init OK 66: test_journaled_string_tree_traverser_context_size OK 66: test_journaled_string_tree_traverser_branch_size OK 66: test_journaled_string_tree_traverser_at_end OK 66: test_journaled_string_tree_traverser_is_base OK 66: test_journaled_string_tree_traverser_advance OK 66: test_journaled_string_tree_traverser_context_iterator OK 66: test_journaled_string_tree_traverser_container OK 66: test_journaled_string_tree_traverser_basic_traversal OK 66: ************************************** 66: Total Tests: 11 66: Skipped: 0 66: Errors: 0 66: ************************************** 59/411 Test #66: test_journaled_string_tree_traverser .............................................. Passed 0.03 sec test 67 Start 67: test_journaled_string_tree_find 67: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_journaled_string_tree_find 67: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/journaled_string_tree 67: Test timeout computed to be: 10000000 67: TEST SUITE test_journaled_string_tree_find 67: SEQAN_ENABLE_DEBUG == 1 67: SEQAN_ENABLE_TESTING == 1 67: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 67: SEQAN_ASYNC_IO == 1 53: BidirectionalFMIndexTest_SearchInString type parameter seqan2::Index, seqan2::Alloc >, seqan2::BidirectionalIndex > > > OK 54: TopDownIndexIteratorTest_Constructor type parameter seqan2::Index >, seqan2::Owner > >, seqan2::FMIndex > > OK 54: TopDownIndexIteratorTest_GoDown type parameter seqan2::Index, seqan2::Alloc >, seqan2::BidirectionalIndex > > > OK 54: TopDownIndexIteratorTest_GoDown type parameter seqan2::Index, seqan2::Alloc >, seqan2::FMIndex > > OK 54: TopDownIndexIteratorTest_GoDown type parameter seqan2::Index, seqan2::Packed > >, seqan2::FMIndex > > OK 54: TopDownIndexIteratorTest_GoDown type parameter seqan2::Index, seqan2::Packed > >, seqan2::FMIndex > > OK 54: TopDownIndexIteratorTest_GoDown type parameter seqan2::Index >, seqan2::FMIndex > > OK 60: test_find2_index_approx_hamming OK 51: IndexTest_ClearEmpty type parameter seqan2::Index, seqan2::Alloc >, seqan2::Owner > >, seqan2::FMIndex > > OK 52: LFTest_IsSentinel type parameter seqan2::Index, seqan2::Alloc >, seqan2::Owner > >, seqan2::FMIndex > > OK 52: LFTest_IsSentinel type parameter seqan2::Index >, seqan2::FMIndex > > OK 52: LFTest_IsSentinel type parameter seqan2::Index, seqan2::Alloc >, seqan2::FMIndex > > OK 52: LFTest_IsSentinel type parameter seqan2::Index >, seqan2::FMIndex > > OK 53: BidirectionalFMIndexTest_SearchInString type parameter seqan2::Index, seqan2::Alloc >, seqan2::BidirectionalIndex > > > OK 57: IndexFinderTest_FindFirstChar type parameter seqan2::Index >, seqan2::Owner > >, seqan2::FMIndex > > OK 57: IndexFinderTest_DefaultFinder type parameter seqan2::Index >, seqan2::IndexSa > OK 57: IndexFinderTest_DefaultFinder type parameter seqan2::Index >, seqan2::IndexEsa > OK 57: IndexFinderTest_DefaultFinder type parameter seqan2::Index, seqan2::Alloc >, seqan2::FMIndex > > OK 57: IndexFinderTest_DefaultFinder type parameter seqan2::Index, seqan2::Packed > >, seqan2::FMIndex > > OK 57: IndexFinderTest_DefaultFinder type parameter seqan2::Index, seqan2::Packed > >, seqan2::FMIndex > > OK 57: IndexFinderTest_DefaultFinder type parameter seqan2::Index >, seqan2::FMIndex > > OK 57: IndexFinderTest_DefaultFinder type parameter seqan2::Index, seqan2::Alloc >, seqan2::Owner > >, seqan2::FMIndex > > OK 57: IndexFinderTest_DefaultFinder type parameter seqan2::Index >, seqan2::Owner > >, seqan2::FMIndex > > OK 57: IndexFinderTest_StdString type parameter seqan2::Index >, seqan2::IndexSa > OK 57: IndexFinderTest_StdString type parameter seqan2::Index >, seqan2::IndexEsa > OK 57: IndexFinderTest_StdString type parameter seqan2::Index, seqan2::Alloc >, seqan2::FMIndex > > OK 57: IndexFinderTest_StdString type parameter seqan2::Index, seqan2::Packed > >, seqan2::FMIndex > > OK 57: IndexFinderTest_StdString type parameter seqan2::Index, seqan2::Packed > >, seqan2::FMIndex > > OK 57: IndexFinderTest_StdString type parameter seqan2::Index >, seqan2::FMIndex > > OK 57: IndexFinderTest_StdString type parameter seqan2::Index, seqan2::Alloc >, seqan2::Owner > >, seqan2::FMIndex > > OK 57: IndexFinderTest_StdString type parameter seqan2::Index >, seqan2::Owner > >, seqan2::FMIndex > > OK 57: IndexFinderTest_StdVector type parameter seqan2::Index >, seqan2::IndexSa > OK 57: IndexFinderTest_StdVector type parameter seqan2::Index >, seqan2::IndexEsa > OK 57: IndexFinderTest_StdVector type parameter seqan2::Index, seqan2::Alloc >, seqan2::FMIndex > > OK 57: IndexFinderTest_StdVector type parameter seqan2::Index, seqan2::Packed > >, seqan2::FMIndex > > OK 57: IndexFinderTest_StdVector type parameter seqan2::Index, seqan2::Packed > >, seqan2::FMIndex > > OK 57: IndexFinderTest_StdVector type parameter seqan2::Index >, seqan2::FMIndex > > OK 57: IndexFinderTest_StdVector type parameter seqan2::Index, seqan2::Alloc >, seqan2::Owner > >, seqan2::FMIndex > > OK 57: IndexFinderTest_StdVector type parameter seqan2::Index >, seqan2::Owner > >, seqan2::FMIndex > > OK 57: ************************************** 57: Total Tests: 32 57: Skipped: 0 57: Errors: 0 57: ************************************** 60/411 Test #57: test_test_index_finder ............................................................ Passed 0.41 sec test 68 Start 68: test_test_map 68: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_map 68: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/map 68: Test timeout computed to be: 10000000 68: TEST SUITE test_map 68: SEQAN_ENABLE_DEBUG == 1 68: SEQAN_ENABLE_TESTING == 1 68: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 68: SEQAN_ASYNC_IO == 1 51: IndexTest_ClearEmpty type parameter seqan2::Index >, seqan2::Owner > >, seqan2::FMIndex > > OK 51: IndexTest_OpenSave type parameter seqan2::Index, seqan2::Alloc >, seqan2::BidirectionalIndex > > > OK 51: IndexTest_OpenSave type parameter seqan2::Index, seqan2::Alloc >, seqan2::FMIndex > > OK 51: IndexTest_OpenSave type parameter seqan2::Index, seqan2::Packed > >, seqan2::FMIndex > > OK 51: IndexTest_OpenSave type parameter seqan2::Index, seqan2::Packed > >, seqan2::FMIndex > > OK 51: IndexTest_OpenSave type parameter seqan2::Index >, seqan2::FMIndex > > OK 52: LFTest_IsSentinel type parameter seqan2::Index, seqan2::Alloc >, seqan2::Owner > >, seqan2::FMIndex > > OK 52: CSATest_IndexSA type parameter seqan2::Index, seqan2::Alloc >, seqan2::FMIndex > > OK 52: CSATest_IndexSA type parameter seqan2::Index >, seqan2::FMIndex > > OK 54: TopDownIndexIteratorTest_GoDown type parameter seqan2::Index, seqan2::Alloc >, seqan2::Owner > >, seqan2::FMIndex > > OK 54: TopDownIndexIteratorTest_GoDown type parameter seqan2::Index >, seqan2::Owner > >, seqan2::FMIndex > > OK 54: ************************************** 54: Total Tests: 14 54: Skipped: 0 54: Errors: 0 54: ************************************** 61/411 Test #54: test_test_index_vstree ............................................................ Passed 0.64 sec test 69 Start 69: test_test_misc 69: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_misc 69: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/misc 69: Test timeout computed to be: 10000000 51: IndexTest_OpenSave type parameter seqan2::Index, seqan2::Alloc >, seqan2::Owner > >, seqan2::FMIndex > > OK 69: TEST SUITE test_misc 69: SEQAN_ENABLE_DEBUG == 1 69: SEQAN_ENABLE_TESTING == 1 69: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 69: SEQAN_ASYNC_IO == 1 69: test_misc_terminal_get_terminal_size OK 69: test_misc_bit_twiddling_pop_count_char OK 69: test_misc_bit_twiddling_pop_count_signed_char OK 69: test_misc_bit_twiddling_pop_count_unsigned_char OK 69: test_misc_bit_twiddling_pop_count_short OK 69: test_misc_bit_twiddling_pop_count_signed_short OK 69: test_misc_bit_twiddling_pop_count_unsigned_short OK 69: test_misc_bit_twiddling_pop_count_int OK 69: test_misc_bit_twiddling_pop_count_signed_int OK 69: test_misc_bit_twiddling_pop_count_unsigned_int OK 69: test_misc_bit_twiddling_pop_count_long OK 69: test_misc_bit_twiddling_pop_count_signed_long OK 69: test_misc_bit_twiddling_pop_count_unsigned_long OK 69: test_misc_bit_twiddling_pop_count_long_long OK 69: test_misc_bit_twiddling_pop_count_signed_long_long OK 69: test_misc_bit_twiddling_pop_count_unsigned_long_long OK 69: test_misc_bit_twiddling_pop_count_int8 OK 69: test_misc_bit_twiddling_pop_count_uint8 OK 69: test_misc_bit_twiddling_pop_count_int16 OK 69: test_misc_bit_twiddling_pop_count_uint16 OK 69: test_misc_bit_twiddling_pop_count_int32 OK 69: test_misc_bit_twiddling_pop_count_uint32 OK 69: test_misc_bit_twiddling_pop_count_int64 OK 69: test_misc_bit_twiddling_pop_count_uint64 OK 69: Interval_Tree__IntervalTreeTest_QueryAtBoundary OK 69: Interval_Tree__IntervalTreeTest_IntervalTree__int OK 69: Interval_Tree__IntervalTreeTest_IntervalTreeFromIterator__int OK 69: Interval_Tree__IntervalTreeTest_NonFullLength__int OK 69: Interval_Tree__IntervalTreeTest_AddInterval__int OK 69: Interval_Tree__IntervalTreeTest_TreeStructure__int OK 69: Interval_Tree__IntervalTreeTest_FindIntervalExcludeTouching__int OK 69: Interval_Tree__IntervalTreeTest_FindNoInterval__int OK 69: Interval_Tree__IntervalTreeTest_GraphMap__int_ComputeCenter_StoreIntervals OK 69: Interval_Tree__IntervalTreeTest_FindIntervalsIntervals__int_ComputeCenter OK 69: test_misc_accumulators_average_accumulator_int_average OK 69: test_misc_accumulators_average_accumulator_int_count OK 69: test_misc_accumulators_average_accumulator_int_sum OK 69: test_misc_accumulators_average_accumulator_int_clear OK 69: test_misc_accumulators_average_accumulator_double_average OK 69: test_misc_accumulators_average_accumulator_double_count OK 69: test_misc_accumulators_average_accumulator_double_sum OK 69: test_misc_accumulators_average_accumulator_double_clear OK 69: test_misc_edit_environment_string_enumerator_hamming OK 69: test_misc_edit_environment_string_enumerator_iterator_hamming OK 69: test_misc_edit_environment_string_enumerator_edit OK 69: test_misc_edit_environment_string_enumerator_iterator_edit OK 69: ************************************** 69: Total Tests: 46 69: Skipped: 0 69: Errors: 0 69: ************************************** 62/411 Test #69: test_test_misc .................................................................... Passed 0.01 sec test 70 Start 70: test_test_modifier 70: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_modifier 70: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/modifier 70: Test timeout computed to be: 10000000 70: TEST SUITE test_modifier 70: SEQAN_ENABLE_DEBUG == 1 70: SEQAN_ENABLE_TESTING == 1 70: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 70: SEQAN_ASYNC_IO == 1 70: test_modifer_shortcuts_dna_string_reverse OK 70: test_modifer_shortcuts_dna5_string_reverse OK 70: test_modifer_shortcuts_rna_string_reverse OK 70: test_modifer_shortcuts_rna5_string_reverse OK 70: test_modifer_shortcuts_dna_string_complement OK 70: test_modifer_shortcuts_dna5_string_complement OK 70: test_modifer_shortcuts_rna_string_complement OK 70: test_modifer_shortcuts_rna5_string_complement OK 70: test_modifer_shortcuts_dna_string_reverse_complement OK 70: test_modifer_shortcuts_dna5_string_reverse_complement OK 70: test_modifer_shortcuts_rna_string_reverse_complement OK 70: test_modifer_shortcuts_rna5_string_reverse_complement OK 70: test_modifer_shortcuts_complement_in_place_string OK 70: test_modifer_shortcuts_complement_in_place_string_set OK 70: test_modifer_shortcuts_reverse_complement_in_place_string OK 70: test_modifer_shortcuts_reverse_complement_in_place_string_set OK 70: test_modifer_shortcuts_reverse_in_place_string OK 70: test_modifer_shortcuts_reverse_in_place_string_set OK 70: test_modifier_reverse_iterator_metafunctions OK 70: test_modifer_shortcuts_to_lower_in_place_string OK 70: test_modifer_shortcuts_to_lower_in_place_string_set OK 70: test_modifer_shortcuts_to_upper_in_place_string OK 70: test_modifer_shortcuts_to_upper_in_place_string_set OK 70: test_modifer_shortcuts_reverse_packed_concat_direct_stringset OK 70: test_modifer_shortcuts_reverse_complement_packed_concat_direct_stringset OK 70: test_modifier_functors_functor_upcase OK 70: test_modifier_functors_functor_lowcase OK 70: test_modifier_functors_dna_complement OK 70: test_modifier_alphabet_size_metafunctions OK 70: test_modifier_DnaQ OK 70: test_modifier_alphabet_enumerate OK 70: test_modifier_alphabet_convert OK 70: test_modifier_alphabet_ord_value OK 70: test_modifier_view_iterator_metafunctions OK 70: test_modifier_view_iterator OK 70: test_modifier_view_string_caesar_chiffre OK 70: test_modifier_view_string_upper_case OK 70: test_modifier_view_string_low_case OK 70: test_modifier_view_string_alphabet_conversion OK 70: test_modifier_view_string_nested_modifier OK 70: test_modifier_convert_in_place OK 70: test_modifier_modified_string_metafunctions OK 70: test_modifier_modified_string_construct OK 70: test_modifier_modified_string_assignment OK 70: test_modifier_modified_string_length OK 70: test_modifier_modified_string_cascade OK 70: test_modifier_modified_iterator_construct OK 70: test_modifier_modified_string_mod_view OK 70: test_modifier_modified_string_mod_view_segment OK 70: test_modifier_modified_string_mod_pos OK 70: test_modifier_modified_string_const_literal OK 70: test_modifier_modified_string_reverse_segment OK 70: test_modifier_minimal OK 70: test_modifier_reverse_back_front OK 70: test_modified_string_padding_construction OK 70: test_modified_string_padding_expand OK 70: test_modified_string_padding_length OK 70: test_modified_string_padding_begin OK 70: test_modified_string_padding_end OK 70: test_modified_string_padding_difference OK 70: test_modified_string_padding_iterator OK 70: test_modified_string_padding_defect_2190 OK 70: ************************************** 70: Total Tests: 62 70: Skipped: 0 70: Errors: 0 70: ************************************** 63/411 Test #70: test_test_modifier ................................................................ Passed 0.02 sec test 71 Start 71: test_test_modifier_cyclic_shape 71: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_modifier_cyclic_shape 71: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/modifier_cyclic_shape 71: Test timeout computed to be: 10000000 71: TEST SUITE test_modifier_cyclic_shape 71: SEQAN_ENABLE_DEBUG == 1 71: SEQAN_ENABLE_TESTING == 1 71: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 71: SEQAN_ASYNC_IO == 1 71: test_modifier_cyclic_shape_cyclic_shape OK 71: test_modifier_cyclic_shape_iterator_generic_alloc_charstring OK 71: test_modifier_cyclic_shape_iterator_generic_mod_charstring OK 71: test_modifier_cyclic_shape_iterator_generic_infix_charstring OK 71: test_modifier_cyclic_shape_iterator_fixed_alloc_charstring OK 71: test_modifier_cyclic_shape_iterator_fixed_mod_charstring OK 71: test_modifier_cyclic_shape_iterator_fixed_infix_charstring OK 71: test_modifier_cyclic_shape_modified_string_construct OK 71: test_modifier_cyclic_shape_modified_string_functions OK 71: test_modifier_cyclic_shape_modified_iterator OK 71: ************************************** 71: Total Tests: 10 71: Skipped: 0 71: Errors: 0 71: ************************************** 64/411 Test #71: test_test_modifier_cyclic_shape ................................................... Passed 0.01 sec test 72 Start 72: test_test_multiple_translation_units 72: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_multiple_translation_units 72: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/multiple_translation_units 72: Test timeout computed to be: 10000000 52: CSATest_IndexSA type parameter seqan2::Index >, seqan2::Owner > >, seqan2::FMIndex > > OK 72: TEST SUITE test_multiple_translation_units 72: SEQAN_ENABLE_DEBUG == 1 72: SEQAN_ENABLE_TESTING == 1 72: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 72: SEQAN_ASYNC_IO == 1 72: ************************************** 72: Total Tests: 0 72: Skipped: 0 72: Errors: 0 72: ************************************** 65/411 Test #72: test_test_multiple_translation_units .............................................. Passed 0.01 sec test 73 Start 73: test_test_parallel 73: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_parallel 73: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/parallel 73: Test timeout computed to be: 10000000 73: TEST SUITE test_parallel 73: SEQAN_ENABLE_DEBUG == 1 73: SEQAN_ENABLE_TESTING == 1 73: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 73: SEQAN_ASYNC_IO == 1 73: PARALLELISM ENABLED (CTEST_FULL_OUTPUT) 73: test_parallel_atomic_inc OK 73: test_parallel_atomic_dec OK 73: test_parallel_atomic_add OK 73: test_parallel_atomic_or OK 73: test_parallel_atomic_xor OK 73: test_parallel_atomic_cas OK 73: test_parallel_atomic_min OK 51: IndexTest_OpenSave type parameter seqan2::Index >, seqan2::Owner > >, seqan2::FMIndex > > OK 51: ************************************** 51: Total Tests: 28 51: Skipped: 0 51: Errors: 0 51: ************************************** 73: test_parallel_atomic_max OK 73: test_parallel_splitter_equidistant OK 73: test_parallel_splitting_compute_splitters OK 52: CSATest_IndexSA type parameter seqan2::Index >, seqan2::Owner > >, seqan2::FMIndex > > OK 66/411 Test #51: test_test_index_base .............................................................. Passed 0.90 sec test 74 Start 74: test_test_parse_lm 74: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_parse_lm 74: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/parse_lm 74: Test timeout computed to be: 10000000 73: test_parallel_sum OK 74: TEST SUITE test_parse_lm 74: SEQAN_ENABLE_DEBUG == 1 74: SEQAN_ENABLE_TESTING == 1 74: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 74: SEQAN_ASYNC_IO == 1 74: test_parse_lm_local_match_constructor OK 74: test_parse_lm_local_match_store_constructor OK 74: test_parse_lm_local_match_store_append_local_match OK 74: test_parse_lm_parse_lastz_general OK 74: test_parse_lm_parse_blastn_tabular OK 74: test_parse_lm_parse_stellar_gff OK 74: ************************************** 74: Total Tests: 6 74: Skipped: 0 74: Errors: 0 74: ************************************** 67/411 Test #74: test_test_parse_lm ................................................................ Passed 0.00 sec test 75 Start 75: test_test_pipe 75: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_pipe 75: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/pipe 75: Test timeout computed to be: 10000000 75: TEST SUITE test_pipe 75: SEQAN_ENABLE_DEBUG == 1 75: SEQAN_ENABLE_TESTING == 1 75: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 75: SEQAN_ASYNC_IO == 1 73: test_parallel_partial_sum OK 73: test_parallel_queue_simple OK 73: test_parallel_queue_resize OK 73: test_parallel_queue_non_pod OK 73: threads: 2 73: writers: 1 52: CSATest_IndexSA type parameter seqan2::Index, seqan2::Alloc >, seqan2::Owner > >, seqan2::FMIndex > > OK 52: CSATest_IndexSA type parameter seqan2::Index >, seqan2::FMIndex > > OK 52: CSATest_IndexSA type parameter seqan2::Index, seqan2::Alloc >, seqan2::FMIndex > > OK 52: CSATest_IndexSA type parameter seqan2::Index >, seqan2::FMIndex > > OK 75: test_pipe_test_external_string OK 75: test_pipe_test_simple_pool OK 52: CSATest_IndexSA type parameter seqan2::Index, seqan2::Alloc >, seqan2::Owner > >, seqan2::FMIndex > > OK 52: CSATest_BeginEnd type parameter seqan2::Index, seqan2::Alloc >, seqan2::FMIndex > > OK 52: CSATest_BeginEnd type parameter seqan2::Index >, seqan2::FMIndex > > OK 73: stop reader #1 100000 73: throughput: 475838 values/s 73: cap: 30 73: test_parallel_queue_spsc_fixedsize OK 73: threads: 2 73: writers: 1 73: stop reader #1 100000 73: throughput: 6722646 values/s 73: cap: 114498 73: test_parallel_queue_spsc_dynamicsize OK 73: threads: 4 73: writers: 1 75: test_pipe_test_mapper OK 52: CSATest_BeginEnd type parameter seqan2::Index >, seqan2::Owner > >, seqan2::FMIndex > > OK 75: test_pipe_test_mapper_partially_filled OK 52: CSATest_BeginEnd type parameter seqan2::Index >, seqan2::Owner > >, seqan2::FMIndex > > OK 68: .................................................................................................... 68: test_map_map OK 68: ************************************** 68: Total Tests: 1 68: Skipped: 0 68: Errors: 0 68: ************************************** 68/411 Test #68: test_test_map ..................................................................... Passed 0.89 sec test 76 Start 76: test_test_platform 76: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_platform 76: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/platform 76: Test timeout computed to be: 10000000 76: TEST SUITE test_platform 76: SEQAN_ENABLE_DEBUG == 1 76: SEQAN_ENABLE_TESTING == 1 76: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 76: SEQAN_ASYNC_IO == 1 76: test_platform_range_based_for_loops1 OK 76: test_platform_range_based_for_loops2 OK 76: ************************************** 76: Total Tests: 2 76: Skipped: 0 76: Errors: 0 76: ************************************** 69/411 Test #76: test_test_platform ................................................................ Passed 0.00 sec test 77 Start 77: test_test_random 77: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_random 77: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/random 77: Test timeout computed to be: 10000000 77: TEST SUITE test_random 77: SEQAN_ENABLE_DEBUG == 1 77: SEQAN_ENABLE_TESTING == 1 77: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 77: SEQAN_ASYNC_IO == 1 77: test_default_rng OK 77: test_random_beta_constructors OK 77: test_random_beta_alpha OK 77: test_random_beta_beta OK 77: test_random_beta_min OK 77: test_random_beta_max OK 77: test_random_beta_param OK 77: test_random_beta_set_param OK 77: test_random_beta_write OK 77: test_random_beta_read OK 77: test_random_beta_functor OK 77: test_random_shuffle OK 77: test_random_cvt_beta_param OK 77: test_random_cvt_lognormal_param OK 77: ************************************** 77: Total Tests: 14 77: Skipped: 0 77: Errors: 0 77: ************************************** 70/411 Test #77: test_test_random .................................................................. Passed 0.01 sec test 78 Start 78: test_test_realign 78: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_realign 78: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/realign 78: Test timeout computed to be: 10000000 78: TEST SUITE test_realign 78: SEQAN_ENABLE_DEBUG == 1 78: SEQAN_ENABLE_TESTING == 1 78: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 78: SEQAN_ASYNC_IO == 1 78: test_realign_one_read_no_gaps OK 78: test_realign_one_read_with_gaps OK 78: test_realign_two_reads_stacked_at_beginning OK 78: test_realign_simple_case OK 78: test_realign_simple_gaps OK 52: CSATest_BeginEnd type parameter seqan2::Index, seqan2::Alloc >, seqan2::Owner > >, seqan2::FMIndex > > OK 52: CSATest_BeginEnd type parameter seqan2::Index >, seqan2::FMIndex > > OK 52: CSATest_BeginEnd type parameter seqan2::Index, seqan2::Alloc >, seqan2::FMIndex > > OK 52: CSATest_BeginEnd type parameter seqan2::Index >, seqan2::FMIndex > > OK 75: test_pipe_test_sorter OK 78: test_realign_simple_insert OK 75: test_pipe_sampler OK 75: test_pipe_tupler OK 75: test_pipe_tupler_multi OK 75: ************************************** 75: Total Tests: 8 75: Skipped: 0 75: Errors: 0 75: ************************************** 71/411 Test #75: test_test_pipe .................................................................... Passed 0.59 sec test 79 Start 79: test_reduced_aminoacid 79: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_reduced_aminoacid 79: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/reduced_aminoacid 79: Test timeout computed to be: 10000000 78: test_realign_simple_insert_window OK 79: TEST SUITE test_reduced_aminoacid 79: SEQAN_ENABLE_DEBUG == 1 79: SEQAN_ENABLE_TESTING == 1 79: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 79: SEQAN_ASYNC_IO == 1 79: test_reduced_aminoacid_buchfink11 OK 79: test_reduced_aminoacid_cannata10 OK 79: test_reduced_aminoacid_li10 OK 79: test_reduced_aminoacid_solis10 OK 79: test_reduced_aminoacid_murphy5 OK 79: test_reduced_aminoacid_murphy10 OK 79: test_reduced_aminoacid_murphy10_moditerators OK 78: test_realign_simple_insert_window_tight_left OK 79: test_reduced_aminoacid_murphy10_modview_fmindex OK 79: ************************************** 79: Total Tests: 8 79: Skipped: 0 79: Errors: 0 79: ************************************** 72/411 Test #79: test_reduced_aminoacid ............................................................ Passed 0.02 sec 78: test_realign_simple_insert_window_tight_right OK test 80 Start 80: test_test_rna_io 80: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_rna_io 80: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/rna_io 80: Test timeout computed to be: 10000000 78: test_realign_tricky_insert_window_cuts OK 78: ************************************** 78: Total Tests: 10 78: Skipped: 0 78: Errors: 0 78: ************************************** 73/411 Test #78: test_test_realign ................................................................. Passed 0.11 sec test 81 Start 81: test_test_roi_io 81: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_roi_io 81: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/roi_io 81: Test timeout computed to be: 10000000 80: TEST SUITE test_rna_io 80: SEQAN_ENABLE_DEBUG == 1 80: SEQAN_ENABLE_TESTING == 1 80: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 80: SEQAN_ASYNC_IO == 1 80: test_rna_io_read_connect OK 81: TEST SUITE test_roi_io 81: SEQAN_ENABLE_DEBUG == 1 81: SEQAN_ENABLE_TESTING == 1 81: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 81: SEQAN_ASYNC_IO == 1 81: test_roi_read_roi_record OK 81: test_roi_write_roi_record OK 81: test_roi_roi_file_read OK 81: test_roi_roi_file_write OK 81: test_roi_io_isOpen_fileIn OK 81: test_roi_io_isOpen_fileOut OK 80: test_rna_io_read_dot_bracket OK 81: ************************************** 81: Total Tests: 6 81: Skipped: 0 81: Errors: 0 81: ************************************** 80: test_rna_io_read_vienna OK 80: test_rna_io_read_stockholm OK 74/411 Test #81: test_test_roi_io .................................................................. Passed 0.01 sec 80: test_rna_io_read_bpseq OK test 82 Start 82: test_test_score 82: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_score 82: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/score 82: Test timeout computed to be: 10000000 80: test_rna_io_read_ebpseq OK 80: test_rna_io_write_connect OK 80: test_rna_io_write_dot_bracket OK 80: test_rna_io_write_vienna OK 80: test_rna_io_write_stockholm OK 80: test_rna_io_write_bpseq OK 80: test_rna_io_write_ebpseq OK 80: test_rna_io_convert OK 80: ************************************** 80: Total Tests: 13 80: Skipped: 0 80: Errors: 0 80: ************************************** 75/411 Test #80: test_test_rna_io .................................................................. Passed 0.01 sec test 83 Start 83: test_test_seeds_combination 83: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_seeds_combination 83: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds 83: Test timeout computed to be: 10000000 82: TEST SUITE test_score 82: SEQAN_ENABLE_DEBUG == 1 82: SEQAN_ENABLE_TESTING == 1 82: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 82: SEQAN_ASYNC_IO == 1 82: test_score_gap_open OK 82: test_score_simple OK 82: test_score_edit OK 83: TEST SUITE test_seeds_combination 83: SEQAN_ENABLE_DEBUG == 1 83: SEQAN_ENABLE_TESTING == 1 83: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 83: SEQAN_ASYNC_IO == 1 83: test_seeds_combination_seeds_combineable_merge_chained OK 83: test_seeds_combination_seeds_combineable_simple_chaining_chained OK 83: test_seeds_combination_seeds_combineable_simple_chaos_chaining_chained OK 83: test_seeds_combination_combine_seeds_merge_chained OK 83: test_seeds_combination_combine_seeds_simple_chaining_chained OK 83: test_seeds_combination_combine_seeds_simple_chaos_chaining_chained OK 83: ************************************** 83: Total Tests: 6 83: Skipped: 0 83: Errors: 0 83: ************************************** 76/411 Test #83: test_test_seeds_combination ....................................................... Passed 0.01 sec test 84 Start 84: test_test_seeds_extension 84: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_seeds_extension 84: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds 84: Test timeout computed to be: 10000000 82: test_score_matrix OK 82: test_score_matrix_file OK 84: TEST SUITE test_seeds_extension 84: SEQAN_ENABLE_DEBUG == 1 84: SEQAN_ENABLE_TESTING == 1 84: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 84: SEQAN_ASYNC_IO == 1 84: test_seeds_extension_match_extension_simple OK 84: test_seeds_extension_ungapped_xdrop_extension_simple OK 84: test_seeds_extension_gapped_xdrop_extension_simple OK 84: test_seeds_extension_match_extension_chained OK 84: test_seeds_extension_ungapped_xdrop_extension_chained OK 84: ************************************** 84: Total Tests: 5 84: Skipped: 0 84: Errors: 0 84: ************************************** 77/411 Test #84: test_test_seeds_extension ......................................................... Passed 0.01 sec test 85 Start 85: test_test_seeds_global_chaining 85: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_seeds_global_chaining 85: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds 85: Test timeout computed to be: 10000000 60: test_find2_index_approx_edit OK 85: TEST SUITE test_seeds_global_chaining 85: SEQAN_ENABLE_DEBUG == 1 85: SEQAN_ENABLE_TESTING == 1 85: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 85: SEQAN_ASYNC_IO == 1 85: test_seeds_global_chaining_one_seed OK 85: test_seeds_global_chaining_two_seeds OK 85: test_seeds_global_chaining_first_seed OK 85: test_seeds_global_chaining_four_seeds OK 85: test_seeds_global_chaining_overlapping_seeds OK 85: test_seeds_global_chaining_issue_2082 OK 85: test_seeds_global_chaining_issue_2082 OK 85: test_seeds_global_chaining_issue_2318 OK 85: test_seeds_global_chaining_no_deleting_intermediate_solution OK 85: test_seeds_global_chaining_deleting_intermediate_solution OK 85: test_seeds_global_chaining_bordering_rectangles OK 85: test_seeds_global_chaining_same_height OK 85: ************************************** 85: Total Tests: 12 85: Skipped: 0 85: Errors: 0 85: ************************************** 78/411 Test #85: test_test_seeds_global_chaining ................................................... Passed 0.01 sec test 86 Start 86: test_test_seeds_seed_base 86: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_seeds_seed_base 86: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds 86: Test timeout computed to be: 10000000 82: test_score_matrix_data OK 82: test_score_sequence_entry_for_score OK 82: test_score_dynamic_score_matrix OK 82: ************************************** 82: Total Tests: 8 82: Skipped: 0 82: Errors: 0 82: ************************************** 60: test_find2_index_approx_small_test OK 60: ************************************** 60: Total Tests: 3 60: Skipped: 0 60: Errors: 0 60: ************************************** 86: TEST SUITE test_seeds_seed_base 86: SEQAN_ENABLE_DEBUG == 1 86: SEQAN_ENABLE_TESTING == 1 86: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 86: SEQAN_ASYNC_IO == 1 86: test_seeds_seed_base_constructors_simple OK 86: test_seeds_seed_base_metafunctions_simple OK 86: test_seeds_seed_base_getters_setters_simple OK 86: test_seeds_seed_base_basic_functions_simple OK 86: test_seeds_seed_base_assign_simple OK 86: test_seeds_seed_base_constructors_chained OK 86: test_seeds_seed_base_metafunctions_chained OK 86: test_seeds_seed_base_getters_setters_chained OK 86: test_seeds_seed_base_basic_functions_chained OK 86: test_seeds_seed_base_assign_chained OK 86: ************************************** 86: Total Tests: 10 86: Skipped: 0 86: Errors: 0 86: ************************************** 79/411 Test #82: test_test_score ................................................................... Passed 0.03 sec 80/411 Test #86: test_test_seeds_seed_base ......................................................... Passed 0.01 sec test 87 Start 87: test_test_seeds_seed_chained 87: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_seeds_seed_chained 87: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds 87: Test timeout computed to be: 10000000 test 88 Start 88: test_test_seeds_seed_diagonal 88: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_seeds_seed_diagonal 88: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds 88: Test timeout computed to be: 10000000 81/411 Test #60: test_test_find2_index_approx ...................................................... Passed 1.32 sec test 89 Start 89: test_test_seeds_seed_set_base 89: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_seeds_seed_set_base 89: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds 89: Test timeout computed to be: 10000000 87: TEST SUITE test_seeds_seed_chained 87: SEQAN_ENABLE_DEBUG == 1 87: SEQAN_ENABLE_TESTING == 1 87: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 87: SEQAN_ASYNC_IO == 1 87: test_seeds_seed_chained_assign OK 87: test_seeds_seed_chained_metafunctions OK 87: test_seeds_seed_chained_append_diagonal OK 87: test_seeds_seed_chained_truncate_diagonals OK 87: test_seeds_seed_chained_iterators OK 87: test_seeds_seed_chained_front_back OK 87: ************************************** 87: Total Tests: 6 87: Skipped: 0 87: Errors: 0 87: ************************************** 82/411 Test #87: test_test_seeds_seed_chained ...................................................... Passed 0.02 sec 88: TEST SUITE test_seeds_seed_diagonal 88: SEQAN_ENABLE_DEBUG == 1 88: SEQAN_ENABLE_TESTING == 1 88: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 88: SEQAN_ASYNC_IO == 1 88: test_seeds_seed_diagonal_constructors OK 88: test_seeds_seed_diagonal_metafunctions OK 88: ************************************** 88: Total Tests: 2 88: Skipped: 0 88: Errors: 0 88: ************************************** 83/411 Test #88: test_test_seeds_seed_diagonal ..................................................... Passed 0.01 sec test 90 Start 90: test_test_seeds_seed_set_unordered 90: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_seeds_seed_set_unordered 90: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds 90: Test timeout computed to be: 10000000 test 91 Start 91: test_test_seeds_align_banded_chain_impl 91: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_seeds_align_banded_chain_impl 91: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds 91: Test timeout computed to be: 10000000 53: BidirectionalFMIndexTest_SearchInStringSet type parameter seqan2::Index >, seqan2::BidirectionalIndex > > > OK 89: TEST SUITE test_seeds_seed_set_base 89: SEQAN_ENABLE_DEBUG == 1 89: SEQAN_ENABLE_TESTING == 1 89: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 89: SEQAN_ASYNC_IO == 1 89: test_seeds_seed_set_base_container_functions_simple_unordered OK 89: test_seeds_seed_set_base_clear_simple OK 89: test_seeds_seed_set_base_clear_chained OK 89: test_seeds_seed_set_base_add_seed_single_threshold_reached_length_simple_unordered OK 89: test_seeds_seed_set_base_add_seed_single_threshold_not_reached_length_simple_unordered OK 89: test_seeds_seed_set_base_add_seed_single_threshold_reached_score_simple_unordered OK 89: test_seeds_seed_set_base_add_seed_single_threshold_not_reached_score_simple_unordered OK 89: test_seeds_seed_set_base_add_seed_merge_left_merging_possible_no_threshold_simple_unordered OK 89: test_seeds_seed_set_base_add_seed_merge_right_merging_possible_no_threshold_simple_unordered OK 89: test_seeds_seed_set_base_add_seed_merge_left_merging_impossible_no_threshold_simple_unordered OK 89: test_seeds_seed_set_base_add_seed_merge_left_merging_possible_threshold_not_reached_length_simple_unordered OK 89: test_seeds_seed_set_base_add_seed_merge_left_merging_possible_threshold_reached_length_simple_unordered OK 89: test_seeds_seed_set_base_add_seed_merge_left_merging_possible_threshold_not_reached_scored_simple_unordered OK 89: test_seeds_seed_set_base_add_seed_merge_left_merging_possible_threshold_reached_scored_simple_unordered OK 89: test_seeds_seed_set_base_add_seed_simple_chain_left_chaining_possible_no_threshold_simple_unordered OK 89: test_seeds_seed_set_base_add_seed_simple_chain_right_chaining_possible_no_threshold_simple_unordered OK 89: test_seeds_seed_set_base_add_seed_simple_chain_left_chaining_impossible_no_threshold_simple_unordered OK 89: test_seeds_seed_set_base_add_seed_simple_chain_left_chaining_possible_threshold_not_reached_length_simple_unordered OK 89: test_seeds_seed_set_base_add_seed_simple_chain_left_chaining_possible_threshold_reached_length_simple_unordered OK 89: test_seeds_seed_set_base_add_seed_simple_chain_left_chaining_possible_threshold_not_reached_scored_simple_unordered OK 89: test_seeds_seed_set_base_add_seed_simple_chain_left_chaining_possible_threshold_reached_scored_simple_unordered OK 89: test_seeds_seed_set_base_add_seed_chaos_left_chaining_possible_no_threshold_simple_unordered OK 89: test_seeds_seed_set_base_add_seed_chaos_right_chaining_possible_no_threshold_simple_unordered OK 89: test_seeds_seed_set_base_add_seed_chaos_left_chaining_impossible_no_threshold_simple_unordered OK 89: test_seeds_seed_set_base_add_seed_chaos_left_chaining_possible_threshold_not_reached_length_simple_unordered OK 89: test_seeds_seed_set_base_add_seed_chaos_left_chaining_possible_threshold_reached_length_simple_unordered OK 89: test_seeds_seed_set_base_add_seed_chaos_left_chaining_possible_threshold_not_reached_scored_simple_unordered OK 89: test_seeds_seed_set_base_add_seed_chaos_left_chaining_possible_threshold_reached_scored_simple_unordered OK 89: test_seeds_seed_set_base_container_functions_chained_unordered OK 89: test_seeds_seed_set_base_add_seed_single_threshold_reached_length_chained_unordered OK 89: test_seeds_seed_set_base_add_seed_single_threshold_not_reached_length_chained_unordered OK 89: test_seeds_seed_set_base_add_seed_single_threshold_reached_score_chained_unordered OK 89: test_seeds_seed_set_base_add_seed_single_threshold_not_reached_score_chained_unordered OK 89: test_seeds_seed_set_base_add_seed_merge_left_merging_possible_no_threshold_chained_unordered OK 89: test_seeds_seed_set_base_add_seed_merge_right_merging_possible_no_threshold_chained_unordered OK 89: test_seeds_seed_set_base_add_seed_merge_left_merging_impossible_no_threshold_chained_unordered OK 89: test_seeds_seed_set_base_add_seed_merge_left_merging_possible_threshold_not_reached_length_chained_unordered OK 89: test_seeds_seed_set_base_add_seed_merge_left_merging_possible_threshold_reached_length_chained_unordered OK 89: test_seeds_seed_set_base_add_seed_merge_left_merging_possible_threshold_not_reached_scored_chained_unordered OK 89: test_seeds_seed_set_base_add_seed_merge_left_merging_possible_threshold_reached_scored_chained_unordered OK 89: test_seeds_seed_set_base_add_seed_chained_chain_left_chaining_possible_no_threshold_chained_unordered OK 89: test_seeds_seed_set_base_add_seed_chained_chain_right_chaining_possible_no_threshold_chained_unordered OK 89: test_seeds_seed_set_base_add_seed_chained_chain_left_chaining_impossible_no_threshold_chained_unordered OK 89: test_seeds_seed_set_base_add_seed_chained_chain_left_chaining_possible_threshold_not_reached_length_chained_unordered OK 89: test_seeds_seed_set_base_add_seed_chained_chain_left_chaining_possible_threshold_reached_length_chained_unordered OK 89: test_seeds_seed_set_base_add_seed_chained_chain_left_chaining_possible_threshold_not_reached_scored_chained_unordered OK 89: test_seeds_seed_set_base_add_seed_chained_chain_left_chaining_possible_threshold_reached_scored_chained_unordered OK 89: test_seeds_seed_set_base_add_seed_chaos_left_chaining_possible_no_threshold_chained_unordered OK 89: test_seeds_seed_set_base_add_seed_chaos_right_chaining_possible_no_threshold_chained_unordered OK 89: test_seeds_seed_set_base_add_seed_chaos_left_chaining_impossible_no_threshold_chained_unordered OK 89: test_seeds_seed_set_base_add_seed_chaos_left_chaining_possible_threshold_not_reached_length_chained_unordered OK 89: test_seeds_seed_set_base_add_seed_chaos_left_chaining_possible_threshold_reached_length_chained_unordered OK 89: test_seeds_seed_set_base_add_seed_chaos_left_chaining_possible_threshold_not_reached_scored_chained_unordered OK 89: test_seeds_seed_set_base_add_seed_chaos_left_chaining_possible_threshold_reached_scored_chained_unordered OK 89: ************************************** 89: Total Tests: 54 89: Skipped: 0 89: Errors: 0 89: ************************************** 84/411 Test #89: test_test_seeds_seed_set_base ..................................................... Passed 0.02 sec test 92 Start 92: test_test_seeds_banded_chain_alignment_interface 92: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_seeds_banded_chain_alignment_interface 92: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds 92: Test timeout computed to be: 10000000 90: TEST SUITE test_seeds_seed_set 90: SEQAN_ENABLE_DEBUG == 1 90: SEQAN_ENABLE_TESTING == 1 90: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 90: SEQAN_ASYNC_IO == 1 90: test_seeds_seed_set_container_functions_unordered OK 90: ************************************** 90: Total Tests: 1 90: Skipped: 0 90: Errors: 0 90: ************************************** 85/411 Test #90: test_test_seeds_seed_set_unordered ................................................ Passed 0.01 sec 91: TEST SUITE test_banded_chain_impl 91: SEQAN_ENABLE_DEBUG == 1 91: SEQAN_ENABLE_TESTING == 1 91: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 91: SEQAN_ASYNC_IO == 1 91: test_banded_chain_alignment_empty_set_linear OK 91: test_banded_chain_alignment_empty_set_affine OK test 93 Start 93: test_seeds_align_banded_chain_issue_2540 93: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_seeds_align_banded_chain_issue_2540 93: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seeds 93: Test timeout computed to be: 10000000 92: TEST SUITE test_banded_chain_alignment_interface 92: SEQAN_ENABLE_DEBUG == 1 92: SEQAN_ENABLE_TESTING == 1 92: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 92: SEQAN_ASYNC_IO == 1 92: test_banded_chain_alignment_align_linear_global_one_score OK 92: test_banded_chain_alignment_align_linear_global_two_scores OK 92: test_banded_chain_alignment_align_linear_semi_one_score OK 92: test_banded_chain_alignment_align_linear_semi_two_scores OK 92: test_banded_chain_alignment_align_linear_overlap_one_score OK 92: test_banded_chain_alignment_align_linear_overlap_two_scores OK 92: test_banded_chain_alignment_align_affine_global_one_score OK 92: test_banded_chain_alignment_align_affine_global_two_scores OK 92: test_banded_chain_alignment_align_affine_semi_one_score OK 92: test_banded_chain_alignment_align_affine_semi_two_scores OK 91: test_banded_chain_alignment_one_seed_linear OK 91: test_banded_chain_alignment_one_seed_affine OK 91: test_banded_chain_alignment_two_seeds_linear OK 91: test_banded_chain_alignment_two_seeds_affine OK 91: test_banded_chain_alignment_three_seeds_linear OK 92: test_banded_chain_alignment_align_affine_overlap_one_score OK 92: test_banded_chain_alignment_align_affine_overlap_two_scores OK 92: test_banded_chain_alignment_gaps_linear_global_one_score OK 92: test_banded_chain_alignment_gaps_linear_global_two_score OK 92: test_banded_chain_alignment_gaps_linear_semi_one_score OK 92: test_banded_chain_alignment_gaps_linear_semi_two_score OK 93: TEST SUITE test_banded_align_chain_issue_2540 93: SEQAN_ENABLE_DEBUG == 1 93: SEQAN_ENABLE_TESTING == 1 93: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 93: SEQAN_ASYNC_IO == 1 93: test_issue_2540_no_glue_point_with_default_band_extension OK 93: ************************************** 93: Total Tests: 1 93: Skipped: 0 93: Errors: 0 93: ************************************** 86/411 Test #93: test_seeds_align_banded_chain_issue_2540 .......................................... Passed 0.01 sec test 94 Start 94: test_test_seq_io 94: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_seq_io 94: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/seq_io 94: Test timeout computed to be: 10000000 52: CSATest_BeginEnd type parameter seqan2::Index, seqan2::Alloc >, seqan2::Owner > >, seqan2::FMIndex > > OK 52: ************************************** 52: Total Tests: 27 52: Skipped: 0 52: Errors: 0 52: ************************************** 91: test_banded_chain_alignment_three_seeds_affine OK 92: test_banded_chain_alignment_gaps_linear_overlap_one_score OK 92: test_banded_chain_alignment_gaps_linear_overlap_two_score OK 87/411 Test #52: test_test_index_fm ................................................................ Passed 1.60 sec 92: test_banded_chain_alignment_gaps_affine_global_one_score OK test 95 Start 95: test_test_sequence 95: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_sequence 95: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/sequence 95: Test timeout computed to be: 10000000 92: test_banded_chain_alignment_gaps_affine_global_two_scores OK 92: test_banded_chain_alignment_gaps_affine_semi_one_score OK 92: test_banded_chain_alignment_gaps_affine_semi_two_scores OK 92: test_banded_chain_alignment_gaps_affine_overlap_one_score OK 92: test_banded_chain_alignment_gaps_affine_overlap_two_scores OK 92: test_banded_chain_alignment_alignmentgraph_linear_global_one_score OK 92: test_banded_chain_alignment_alignmentgraph_linear_global_two_scores OK 92: test_banded_chain_alignment_alignmentgraph_linear_semi_one_score OK 92: test_banded_chain_alignment_alignmentgraph_linear_semi_two_scores OK 92: test_banded_chain_alignment_alignmentgraph_linear_overlap_one_score OK 92: test_banded_chain_alignment_alignmentgraph_linear_overlap_two_scores OK 92: test_banded_chain_alignment_alignmentgraph_affine_global_one_score OK 92: test_banded_chain_alignment_alignmentgraph_affine_global_two_scores OK 92: test_banded_chain_alignment_alignmentgraph_affine_semi_one_score OK 92: test_banded_chain_alignment_alignmentgraph_affine_semi_two_scores OK 92: test_banded_chain_alignment_alignmentgraph_affine_overlap_one_score OK 92: test_banded_chain_alignment_alignmentgraph_affine_overlap_two_scores OK 92: test_banded_chain_alignment_fragments_linear_global_one_score OK 92: test_banded_chain_alignment_fragments_linear_global_two_scores OK 91: test_banded_chain_alignment_special_seeds_linear OK 91: test_banded_chain_alignment_special_seeds_affine OK 91: test_banded_chain_alignment_band_extensions_linear OK 91: test_banded_chain_alignment_band_extensions_affine OK 91: test_banded_chain_alignment_issue_1020 OK 91: test_banded_chain_score_overflow_detection OK 91: ************************************** 91: Total Tests: 14 91: Skipped: 0 91: Errors: 0 91: ************************************** 94: TEST SUITE test_seq_io 94: SEQAN_ENABLE_DEBUG == 1 94: SEQAN_ENABLE_TESTING == 1 94: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 94: SEQAN_ASYNC_IO == 1 94: test_seq_io_sequence_file_recognize_file_type_gz_fasta OK 94: test_seq_io_sequence_file_recognize_file_type_bz2_fasta OK 94: test_seq_io_sequence_file_recognize_file_format_text_fasta OK 94: test_seq_io_sequence_file_recognize_file_format_text_fastq OK 88/411 Test #91: test_test_seeds_align_banded_chain_impl ........................................... Passed 0.03 sec test 96 Start 96: test_test_sequence_v2 96: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_sequence_v2 96: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/sequence 96: Test timeout computed to be: 10000000 95: TEST SUITE Sequence tests 95: SEQAN_ENABLE_DEBUG == 1 95: SEQAN_ENABLE_TESTING == 1 95: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 95: SEQAN_ASYNC_IO == 1 95: test_sequence_adaptions_metafunctions_std_string OK 95: test_sequence_adaptions_iterators_std_string OK 95: test_sequence_adaptions_sequence_interface_std_string OK 95: test_sequence_adaptions_sequence_memory_std_string OK 95: test_sequence_adaptions_metafunctions_std_vector OK 95: test_sequence_adaptions_iterators_std_vector OK 95: test_sequence_adaptions_sequence_interface_std_vector OK 95: test_sequence_adaptions_sequence_memory_std_vector OK 95: test_sequence_adaptions_metafunctions_std_array OK 95: test_sequence_adaptions_iterators_std_array OK 95: test_sequence_adaptions_sequence_interface_std_array OK 95: test_sequence_adaptions_metafunctions_std_list OK 95: test_sequence_adaptions_iterators_std_list OK 95: test_sequence_adaptions_sequence_interface_std_list OK 95: Sequence_Interface OK 95: String_Base OK 95: String_Alloc OK 95: String_Array OK 95: String_Stack OK 95: String_Pointer OK 95: String_CStyle OK 92: test_banded_chain_alignment_fragments_linear_semi_one_score OK 92: test_banded_chain_alignment_fragments_linear_semi_two_scores OK 92: test_banded_chain_alignment_fragments_linear_overlap_one_score OK 92: test_banded_chain_alignment_fragments_linear_overlap_two_scores OK 92: test_banded_chain_alignment_fragments_affine_global_one_score OK 92: test_banded_chain_alignment_fragments_affine_global_two_scores OK 92: test_banded_chain_alignment_fragments_affine_semi_one_score OK 92: test_banded_chain_alignment_fragments_affine_semi_two_scores OK 92: test_banded_chain_alignment_fragments_affine_overlap_one_score OK 92: test_banded_chain_alignment_fragments_affine_overlap_two_scores OK 92: test_banded_chain_alignment_stl_vector_adaption OK 92: ************************************** 92: Total Tests: 49 92: Skipped: 0 92: Errors: 0 92: ************************************** 89/411 Test #92: test_test_seeds_banded_chain_alignment_interface .................................. Passed 0.03 sec test 97 Start 97: test_test_stringset_v2 97: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_stringset_v2 97: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/sequence 97: Test timeout computed to be: 10000000 94: test_tag_select_intersect OK 94: test_seq_io_sequence_file_read_record_text_fasta OK 94: test_seq_io_sequence_file_read_all_text_fasta OK 94: test_seq_io_sequence_file_write_record_text_fasta OK 94: test_seq_io_sequence_file_write_all_text_fasta OK 94: test_seq_io_sequence_file_write_record_text_fastq_no_qual OK 94: test_seq_io_sequence_file_write_record_text_fastq_with_qual OK 94: test_seq_io_sequence_file_write_all_text_fastq_no_qual OK 94: test_seq_io_sequence_file_write_all_text_fastq_with_qual OK 94: test_seq_io_sequence_file_isOpen_fileIn OK 94: test_seq_io_sequence_file_isOpen_fileOut OK 94: test_seq_io_genomic_region_default_constructed OK 94: test_seq_io_genomic_region_from_string OK 94: test_seq_io_genomic_region_clear OK 94: test_seq_io_genomic_region_parse_chrom OK 94: test_seq_io_genomic_region_parse_chrom_begin OK 94: test_seq_io_genomic_region_parse_chrom_begin_end OK 94: test_seq_io_genomic_region_to_string_interval OK 94: test_seq_io_genomic_region_to_string_point OK 94: test_seq_io_genomic_fai_index_build OK 94: test_seq_io_genomic_fai_index_write OK 94: test_seq_io_genomic_fai_index_read OK 94: test_seq_io_genomic_fai_index_read_sequence OK 94: test_seq_io_genomic_fai_index_read_region OK 94: test_stream_read_embl_single_char_array_stream OK 94: test_stream_read_embl_record_char_array_stream OK 94: test_stream_read_embl_single_mmap OK 94: test_stream_read_embl_single_batch_mmap OK 94: test_stream_read_genbank_single_char_array_stream OK 94: test_stream_read_genbank_record_char_array_stream OK 95: String_Packed OK 95: Std_String OK 95: Lexical OK 95: Combinatoric OK 95: Segment OK 95: StringSet_Owner_Default OK 95: StringSet_Concat_Owner_Default OK 95: StringSet_Concat_Owner_ConcatDirect OK 95: StringSet_Id_Dependent_Tight OK 95: StringSet_Id_Dependent_Generous OK 95: StringSetIdHolder_Char_Dependent_Tight OK 95: StringSetIdHolder_Char_Dependent_Generous OK 95: Infix OK 95: Suffix OK 95: ticket317 OK 95: ticket848 OK 95: DEFAULT CONSTRUCTING TestContainer 0xffffed278d00 95: string.data_begin 0xaaaacce7ade0 95: COPY CONSTRUCTING TestContainer 0xffffed278d20 95: other 0xffffed278d00 95: string.data_begin 0xaaaacce7ba90 95: COPY CONSTRUCTING TestContainer 0xaaaacce7b360 95: other 0xffffed278d20 95: string.data_begin 0xaaaacce7bb20 95: DECONSTRUCTING TestContainer 0xffffed278d20 95: string.data_begin 0xaaaacce7ba90 95: DECONSTRUCTING TestContainer 0xffffed278d00 95: string.data_begin 0xaaaacce7ade0 95: DECONSTRUCTING TestContainer 0xaaaacce7b360 95: string.data_begin 0xaaaacce7bb20 95: test_find_motif_memory_leak_ticket_364 OK 95: ticket901 OK 96: TEST SUITE tests 96: SEQAN_ENABLE_DEBUG == 1 96: SEQAN_ENABLE_TESTING == 1 96: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 96: SEQAN_ASYNC_IO == 1 96: StringTestCommon_DefaultConstructible type parameter seqan2::String, seqan2::External >, 4194304u, 2u> > > OK 96: StringTestCommon_DefaultConstructible type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_DefaultConstructible type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_DefaultConstructible type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_DefaultConstructible type parameter seqan2::String, seqan2::MMap >, unsigned long> > > OK 96: StringTestCommon_DefaultConstructible type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_DefaultConstructible type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_DefaultConstructible type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_DefaultConstructible type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_DefaultConstructible type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_DefaultConstructible type parameter seqan2::String > > OK 96: StringTestCommon_DefaultConstructible type parameter seqan2::String > > OK 96: StringTestCommon_DefaultConstructible type parameter seqan2::String > > OK 96: StringTestCommon_DefaultConstructible type parameter seqan2::String, seqan2::Array<100ul> > OK 96: StringTestCommon_DefaultConstructible type parameter seqan2::String > OK 96: StringTestCommon_DefaultConstructible type parameter seqan2::String > OK 96: StringTestCommon_DefaultConstructible type parameter seqan2::String > OK 96: StringTestCommon_DefaultConstructible type parameter seqan2::String, seqan2::Block<4096ul> > OK 96: StringTestCommon_DefaultConstructible type parameter seqan2::String > OK 96: StringTestCommon_DefaultConstructible type parameter seqan2::String > OK 96: StringTestCommon_DefaultConstructible type parameter seqan2::String > OK 96: StringTestCommon_DefaultConstructible type parameter seqan2::String, seqan2::Alloc > OK 96: StringTestCommon_DefaultConstructible type parameter seqan2::String > OK 96: StringTestCommon_DefaultConstructible type parameter seqan2::String > OK 96: StringTestCommon_DefaultConstructible type parameter seqan2::String > OK 96: StringTestCommon_DefaultConstructible type parameter std::__cxx11::basic_string, std::allocator > OK 96: StringTestCommon_DefaultConstructible type parameter std::vector, std::allocator > > OK 96: StringTestCommon_DefaultConstructible type parameter std::vector > OK 96: StringTestCommon_DefaultConstructible type parameter std::vector > OK 96: StringTestCommon_DefaultConstructible type parameter std::vector > OK 96: StringTestCommon_DefaultConstructible type parameter std::deque, std::allocator > > OK 96: StringTestCommon_DefaultConstructible type parameter std::deque > OK 96: StringTestCommon_DefaultConstructible type parameter std::deque > OK 96: StringTestCommon_DefaultConstructible type parameter std::deque > OK 96: StringTestCommon_DefaultConstructible type parameter std::forward_list, std::allocator > > OK 96: StringTestCommon_DefaultConstructible type parameter std::forward_list > OK 96: StringTestCommon_DefaultConstructible type parameter std::forward_list > OK 96: StringTestCommon_DefaultConstructible type parameter std::forward_list > OK 96: StringTestCommon_DefaultConstructible type parameter std::__cxx11::list, std::allocator > > OK 96: StringTestCommon_DefaultConstructible type parameter std::__cxx11::list > OK 96: StringTestCommon_DefaultConstructible type parameter std::__cxx11::list > OK 96: StringTestCommon_DefaultConstructible type parameter std::__cxx11::list > OK 96: StringTestCommon_CopyConstructible type parameter seqan2::String, seqan2::External >, 4194304u, 2u> > > OK 96: StringTestCommon_CopyConstructible type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_CopyConstructible type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_CopyConstructible type parameter seqan2::String >, 4194304u, 2u> > > OK 94: test_stream_read_genbank_single_mmap OK 94: test_stream_read_genbank_single_batch_mmap OK 94: test_seq_io_bam_file_sam_read_sequences OK 94: test_seq_io_bam_file_sam_read_sequences_and_qualities OK 94: test_seq_io_bam_file_sam_write_sequences OK 94: test_seq_io_bam_file_sam_write_sequences_and_qualities OK 95: ticket1108 OK 95: String_Packed_Extension OK 95: ************************************** 95: Total Tests: 41 95: Skipped: 0 95: Errors: 0 95: ************************************** 96: StringTestCommon_CopyConstructible type parameter seqan2::String, seqan2::MMap >, unsigned long> > > OK 96: StringTestCommon_CopyConstructible type parameter seqan2::String >, unsigned long> > > OK 97: TEST SUITE tests 97: SEQAN_ENABLE_DEBUG == 1 97: SEQAN_ENABLE_TESTING == 1 97: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 97: SEQAN_ASYNC_IO == 1 97: StringSetTestCommon_CopyConstructible type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 96: StringTestCommon_CopyConstructible type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_CopyConstructible type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_CopyConstructible type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_CopyConstructible type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_CopyConstructible type parameter seqan2::String > > OK 96: StringTestCommon_CopyConstructible type parameter seqan2::String > > OK 96: StringTestCommon_CopyConstructible type parameter seqan2::String > > OK 96: StringTestCommon_CopyConstructible type parameter seqan2::String, seqan2::Array<100ul> > OK 96: StringTestCommon_CopyConstructible type parameter seqan2::String > OK 96: StringTestCommon_CopyConstructible type parameter seqan2::String > OK 96: StringTestCommon_CopyConstructible type parameter seqan2::String > OK 96: StringTestCommon_CopyConstructible type parameter seqan2::String, seqan2::Block<4096ul> > OK 96: StringTestCommon_CopyConstructible type parameter seqan2::String > OK 96: StringTestCommon_CopyConstructible type parameter seqan2::String > OK 96: StringTestCommon_CopyConstructible type parameter seqan2::String > OK 96: StringTestCommon_CopyConstructible type parameter seqan2::String, seqan2::Alloc > OK 96: StringTestCommon_CopyConstructible type parameter seqan2::String > OK 94: test_seq_io_bam_file_bam_read_sequences OK 96: StringTestCommon_CopyConstructible type parameter seqan2::String > OK 96: StringTestCommon_CopyConstructible type parameter seqan2::String > OK 96: StringTestCommon_CopyConstructible type parameter std::__cxx11::basic_string, std::allocator > OK 96: StringTestCommon_CopyConstructible type parameter std::vector, std::allocator > > OK 96: StringTestCommon_CopyConstructible type parameter std::vector > OK 90/411 Test #95: test_test_sequence ................................................................ Passed 0.02 sec 96: StringTestCommon_CopyConstructible type parameter std::vector > OK 96: StringTestCommon_CopyConstructible type parameter std::vector > OK 96: StringTestCommon_CopyConstructible type parameter std::deque, std::allocator > > OK 96: StringTestCommon_CopyConstructible type parameter std::deque > OK 96: StringTestCommon_CopyConstructible type parameter std::deque > OK 96: StringTestCommon_CopyConstructible type parameter std::deque > OK 96: StringTestCommon_CopyConstructible type parameter std::forward_list, std::allocator > > OK 96: StringTestCommon_CopyConstructible type parameter std::forward_list > OK 96: StringTestCommon_CopyConstructible type parameter std::forward_list > OK 96: StringTestCommon_CopyConstructible type parameter std::forward_list > OK 96: StringTestCommon_CopyConstructible type parameter std::__cxx11::list, std::allocator > > OK 96: StringTestCommon_CopyConstructible type parameter std::__cxx11::list > OK 96: StringTestCommon_CopyConstructible type parameter std::__cxx11::list > OK 96: StringTestCommon_CopyConstructible type parameter std::__cxx11::list > OK test 98 Start 98: test_test_sequence_journaled 98: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_sequence_journaled 98: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/sequence_journaled 98: Test timeout computed to be: 10000000 96: StringTestCommon_LessOperator type parameter seqan2::String, seqan2::External >, 4194304u, 2u> > > OK 96: StringTestCommon_LessOperator type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_LessOperator type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_LessOperator type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_LessOperator type parameter seqan2::String, seqan2::MMap >, unsigned long> > > OK 96: StringTestCommon_LessOperator type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_LessOperator type parameter seqan2::String >, unsigned long> > > OK 97: StringSetTestCommon_CopyConstructible type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_CopyConstructible type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_CopyConstructible type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_CopyConstructible type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_CopyConstructible type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_CopyConstructible type parameter seqan2::StringSet, seqan2::Array<100ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_CopyConstructible type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_CopyConstructible type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_CopyConstructible type parameter seqan2::StringSet, seqan2::Array<1000ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_CopyConstructible type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_CopyConstructible type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_CopyConstructible type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_CopyConstructible type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_CopyConstructible type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_CopyConstructible type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_CopyConstructible type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_CopyConstructible type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_DefaultConstructible type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_DefaultConstructible type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_DefaultConstructible type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_DefaultConstructible type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_DefaultConstructible type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_DefaultConstructible type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_DefaultConstructible type parameter seqan2::StringSet, seqan2::Array<100ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_DefaultConstructible type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_DefaultConstructible type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_DefaultConstructible type parameter seqan2::StringSet, seqan2::Array<1000ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_DefaultConstructible type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_DefaultConstructible type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_DefaultConstructible type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_DefaultConstructible type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_DefaultConstructible type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_DefaultConstructible type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_DefaultConstructible type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_DefaultConstructible type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Comparison type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_Comparison type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Comparison type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Comparison type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_Comparison type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Comparison type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Comparison type parameter seqan2::StringSet, seqan2::Array<100ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_Comparison type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Comparison type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Comparison type parameter seqan2::StringSet, seqan2::Array<1000ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_Comparison type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Comparison type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Comparison type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_Comparison type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Comparison type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Comparison type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_Comparison type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Comparison type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Append type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_Append type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Append type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Append type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_Append type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Append type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Append type parameter seqan2::StringSet, seqan2::Array<100ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_Append type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Append type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Append type parameter seqan2::StringSet, seqan2::Array<1000ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_Append type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Append type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Append type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_Append type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Append type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Append type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_Append type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Append type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_AppendValue type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_AppendValue type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_AppendValue type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_AppendValue type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_AppendValue type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_AppendValue type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_AppendValue type parameter seqan2::StringSet, seqan2::Array<100ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_AppendValue type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_AppendValue type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_AppendValue type parameter seqan2::StringSet, seqan2::Array<1000ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_AppendValue type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_AppendValue type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_AppendValue type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_AppendValue type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_AppendValue type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_AppendValue type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_AppendValue type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_AppendValue type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Assign type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_Assign type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Assign type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Assign type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_Assign type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Assign type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Assign type parameter seqan2::StringSet, seqan2::Array<100ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_Assign type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Assign type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Assign type parameter seqan2::StringSet, seqan2::Array<1000ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_Assign type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Assign type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Assign type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_Assign type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Assign type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Assign type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_Assign type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Assign type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_AssignValue type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_AssignValue type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_AssignValue type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_AssignValue type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_AssignValue type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_AssignValue type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_AssignValue type parameter seqan2::StringSet, seqan2::Array<100ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_AssignValue type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_AssignValue type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_AssignValue type parameter seqan2::StringSet, seqan2::Array<1000ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_AssignValue type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_AssignValue type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_AssignValue type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_AssignValue type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_AssignValue type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_AssignValue type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_AssignValue type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_AssignValue type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_AssignValueById type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_AssignValueById type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_AssignValueById type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_AssignValueById type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_AssignValueById type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_AssignValueById type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_AssignValueById type parameter seqan2::StringSet, seqan2::Array<100ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_AssignValueById type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_AssignValueById type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_AssignValueById type parameter seqan2::StringSet, seqan2::Array<1000ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_AssignValueById type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_AssignValueById type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_AssignValueById type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_AssignValueById type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_AssignValueById type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_AssignValueById type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_AssignValueById type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_AssignValueById type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Back type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_Back type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Back type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Back type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_Back type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Back type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Back type parameter seqan2::StringSet, seqan2::Array<100ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_Back type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Back type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Back type parameter seqan2::StringSet, seqan2::Array<1000ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_Back type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Back type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Back type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_Back type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Back type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Back type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_Back type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Back type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Begin type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_Begin type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Begin type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Begin type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_Begin type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Begin type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Begin type parameter seqan2::StringSet, seqan2::Array<100ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_Begin type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Begin type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Begin type parameter seqan2::StringSet, seqan2::Array<1000ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_Begin type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Begin type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Begin type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_Begin type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Begin type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Begin type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_Begin type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Begin type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_BeginPosition type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_BeginPosition type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_BeginPosition type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_BeginPosition type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_BeginPosition type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_BeginPosition type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_BeginPosition type parameter seqan2::StringSet, seqan2::Array<100ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_BeginPosition type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_BeginPosition type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_BeginPosition type parameter seqan2::StringSet, seqan2::Array<1000ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_BeginPosition type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_BeginPosition type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_BeginPosition type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_BeginPosition type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_BeginPosition type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_BeginPosition type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_BeginPosition type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_BeginPosition type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Clear type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_Clear type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Clear type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Clear type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_Clear type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Clear type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Clear type parameter seqan2::StringSet, seqan2::Array<100ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_Clear type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Clear type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Clear type parameter seqan2::StringSet, seqan2::Array<1000ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_Clear type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Clear type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Clear type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_Clear type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Clear type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Clear type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_Clear type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Clear type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Concat type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_Concat type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Concat type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Concat type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_Concat type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Concat type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Concat type parameter seqan2::StringSet, seqan2::Array<100ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_Concat type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Concat type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Concat type parameter seqan2::StringSet, seqan2::Array<1000ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_Concat type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Concat type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Concat type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_Concat type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Concat type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Concat type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_Concat type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Concat type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_End type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_End type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_End type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_End type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_End type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_End type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_End type parameter seqan2::StringSet, seqan2::Array<100ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_End type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_End type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_End type parameter seqan2::StringSet, seqan2::Array<1000ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_End type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_End type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_End type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_End type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_End type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_End type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_End type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_End type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_EndPosition type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_EndPosition type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_EndPosition type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_EndPosition type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_EndPosition type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_EndPosition type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_EndPosition type parameter seqan2::StringSet, seqan2::Array<100ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_EndPosition type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_EndPosition type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_EndPosition type parameter seqan2::StringSet, seqan2::Array<1000ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_EndPosition type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_EndPosition type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_EndPosition type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_EndPosition type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_EndPosition type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_EndPosition type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_EndPosition type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_EndPosition type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Erase type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_Erase type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Erase type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Erase type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_Erase type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Erase type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Erase type parameter seqan2::StringSet, seqan2::Array<100ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_Erase type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Erase type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Erase type parameter seqan2::StringSet, seqan2::Array<1000ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_Erase type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Erase type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Erase type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_Erase type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Erase type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Erase type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_Erase type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Erase type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_EraseBack type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_EraseBack type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_EraseBack type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_EraseBack type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_EraseBack type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_EraseBack type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_EraseBack type parameter seqan2::StringSet, seqan2::Array<100ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_EraseBack type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_EraseBack type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_EraseBack type parameter seqan2::StringSet, seqan2::Array<1000ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_EraseBack type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_EraseBack type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_EraseBack type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_EraseBack type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_EraseBack type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_EraseBack type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_EraseBack type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_EraseBack type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Front type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_Front type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Front type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Front type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_Front type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Front type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Front type parameter seqan2::StringSet, seqan2::Array<100ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_Front type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Front type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Front type parameter seqan2::StringSet, seqan2::Array<1000ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_Front type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Front type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Front type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_Front type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Front type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Front type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_Front type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Front type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_GetValue type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > SKIPPED 97: StringSetTestCommon_GetValue type parameter seqan2::StringSet > >, seqan2::Owner > > SKIPPED 97: StringSetTestCommon_GetValue type parameter seqan2::StringSet > >, seqan2::Owner > > SKIPPED 97: StringSetTestCommon_GetValue type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > SKIPPED 97: StringSetTestCommon_GetValue type parameter seqan2::StringSet > >, seqan2::Owner > > SKIPPED 97: StringSetTestCommon_GetValue type parameter seqan2::StringSet > >, seqan2::Owner > > SKIPPED 97: StringSetTestCommon_GetValue type parameter seqan2::StringSet, seqan2::Array<100ul> >, seqan2::Owner > > SKIPPED 97: StringSetTestCommon_GetValue type parameter seqan2::StringSet >, seqan2::Owner > > SKIPPED 97: StringSetTestCommon_GetValue type parameter seqan2::StringSet >, seqan2::Owner > > SKIPPED 97: StringSetTestCommon_GetValue type parameter seqan2::StringSet, seqan2::Array<1000ul> >, seqan2::Owner > > SKIPPED 97: StringSetTestCommon_GetValue type parameter seqan2::StringSet >, seqan2::Owner > > SKIPPED 97: StringSetTestCommon_GetValue type parameter seqan2::StringSet >, seqan2::Owner > > SKIPPED 97: StringSetTestCommon_GetValue type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > SKIPPED 97: StringSetTestCommon_GetValue type parameter seqan2::StringSet >, seqan2::Owner > > SKIPPED 97: StringSetTestCommon_GetValue type parameter seqan2::StringSet >, seqan2::Owner > > SKIPPED 97: StringSetTestCommon_GetValue type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > SKIPPED 97: StringSetTestCommon_GetValue type parameter seqan2::StringSet >, seqan2::Owner > > SKIPPED 97: StringSetTestCommon_GetValue type parameter seqan2::StringSet >, seqan2::Owner > > SKIPPED 97: StringSetTestCommon_GetValueById type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_GetValueById type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_GetValueById type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_GetValueById type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_GetValueById type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_GetValueById type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_GetValueById type parameter seqan2::StringSet, seqan2::Array<100ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_GetValueById type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_GetValueById type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_GetValueById type parameter seqan2::StringSet, seqan2::Array<1000ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_GetValueById type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_GetValueById type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_GetValueById type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_GetValueById type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_GetValueById type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_GetValueById type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_GetValueById type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_GetValueById type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Insert type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 98: TEST SUITE test_sequence_journaled 98: SEQAN_ENABLE_DEBUG == 1 98: SEQAN_ENABLE_TESTING == 1 98: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 98: SEQAN_ASYNC_IO == 1 98: test_sequence_journaled_sorted_array_assign OK 98: test_sequence_journaled_sorted_array_set OK 98: test_sequence_journaled_sorted_array_host OK 98: test_sequence_journaled_sorted_array_clear OK 98: test_sequence_journaled_sorted_array_empty OK 98: test_sequence_journaled_sorted_array_erase_position OK 98: test_sequence_journaled_sorted_array_erase_begin_end OK 98: test_sequence_journaled_sorted_array_insert OK 98: test_sequence_journaled_sorted_array_insert_value OK 98: test_sequence_journaled_sorted_array_assign_value OK 98: test_sequence_journaled_sorted_array_subscript_operator OK 98: test_sequence_journaled_sorted_array_assign_infix OK 98: test_sequence_journaled_sorted_array_length OK 98: test_sequence_journaled_sorted_array_virtual_to_host_position OK 98: test_sequence_journaled_sorted_array_host_to_virtual_position OK 98: test_sequence_journaled_sorted_array_copy_constructor OK 98: test_sequence_journaled_sorted_array_begin_end_iterator OK 98: test_sequence_journaled_sorted_array_begin_end_const_iterator OK 98: test_sequence_journaled_sorted_array_subscript_operator_randomized OK 98: test_sequence_journaled_sorted_array_fuzzying OK 98: test_sequence_journaled_sorted_array_segments_read_only OK 98: test_sequence_journaled_sorted_array_segments_read_write OK 98: test_sequence_journaled_sorted_array_flatten OK 98: test_sequence_journaled_sorted_array_reset OK 98: test_sequence_journaled_sorted_array_iterator_sum OK 98: test_sequence_journaled_sorted_array_iterator_difference OK 98: test_sequence_journaled_sorted_array_iterator_relations OK 98: test_sequence_journaled_sorted_array_iterator_decrement OK 98: test_sequence_journaled_sorted_array_iterator_set_position OK 98: test_sequence_journaled_sorted_array_iterator_position OK 98: test_sequence_journaled_sorted_array_iterator_rooted_at_begin OK 98: test_sequence_journaled_sorted_array_iterator_rooted_at_end OK 98: test_sequence_journaled_sorted_array_iterator_rooted_go_begin OK 98: test_sequence_journaled_sorted_array_iterator_rooted_go_end OK 98: test_sequence_journaled_sorted_array_iterator_rooted_container OK 98: ************************************** 98: Total Tests: 35 98: Skipped: 0 98: Errors: 0 98: ************************************** 91/411 Test #98: test_test_sequence_journaled ...................................................... Passed 0.01 sec 96: StringTestCommon_LessOperator type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_LessOperator type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_LessOperator type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_LessOperator type parameter seqan2::String > > OK 96: StringTestCommon_LessOperator type parameter seqan2::String > > OK 96: StringTestCommon_LessOperator type parameter seqan2::String > > OK 96: StringTestCommon_LessOperator type parameter seqan2::String, seqan2::Array<100ul> > OK 96: StringTestCommon_LessOperator type parameter seqan2::String > OK 96: StringTestCommon_LessOperator type parameter seqan2::String > OK 96: StringTestCommon_LessOperator type parameter seqan2::String > OK 96: StringTestCommon_LessOperator type parameter seqan2::String, seqan2::Block<4096ul> > OK 96: StringTestCommon_LessOperator type parameter seqan2::String > OK 96: StringTestCommon_LessOperator type parameter seqan2::String > OK 96: StringTestCommon_LessOperator type parameter seqan2::String > OK 96: StringTestCommon_LessOperator type parameter seqan2::String, seqan2::Alloc > OK 96: StringTestCommon_LessOperator type parameter seqan2::String > OK 96: StringTestCommon_LessOperator type parameter seqan2::String > OK 96: StringTestCommon_LessOperator type parameter seqan2::String > OK 96: StringTestCommon_LessOperator type parameter std::__cxx11::basic_string, std::allocator > OK 96: StringTestCommon_LessOperator type parameter std::vector, std::allocator > > OK 96: StringTestCommon_LessOperator type parameter std::vector > OK 96: StringTestCommon_LessOperator type parameter std::vector > OK 96: StringTestCommon_LessOperator type parameter std::vector > OK 96: StringTestCommon_LessOperator type parameter std::deque, std::allocator > > OK 96: StringTestCommon_LessOperator type parameter std::deque > OK 96: StringTestCommon_LessOperator type parameter std::deque > OK 96: StringTestCommon_LessOperator type parameter std::deque > OK 96: StringTestCommon_LessOperator type parameter std::forward_list, std::allocator > > OK 96: StringTestCommon_LessOperator type parameter std::forward_list > OK 96: StringTestCommon_LessOperator type parameter std::forward_list > OK 96: StringTestCommon_LessOperator type parameter std::forward_list > OK 96: StringTestCommon_LessOperator type parameter std::__cxx11::list, std::allocator > > OK 96: StringTestCommon_LessOperator type parameter std::__cxx11::list > OK 96: StringTestCommon_LessOperator type parameter std::__cxx11::list > OK 96: StringTestCommon_LessOperator type parameter std::__cxx11::list > OK 96: StringTestCommon_LessEqualOperator type parameter seqan2::String, seqan2::External >, 4194304u, 2u> > > OK 96: StringTestCommon_LessEqualOperator type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_LessEqualOperator type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_LessEqualOperator type parameter seqan2::String >, 4194304u, 2u> > > OK 94: test_seq_io_bam_file_bam_read_sequences_and_qualities OK test 99 Start 99: test_test_simd_vector 99: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_simd_vector 99: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/simd 99: Test timeout computed to be: 10000000 96: StringTestCommon_LessEqualOperator type parameter seqan2::String, seqan2::MMap >, unsigned long> > > OK 97: StringSetTestCommon_Insert type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Insert type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Insert type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_Insert type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Insert type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Insert type parameter seqan2::StringSet, seqan2::Array<100ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_Insert type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Insert type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Insert type parameter seqan2::StringSet, seqan2::Array<1000ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_Insert type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Insert type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Insert type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_Insert type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Insert type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Insert type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_Insert type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Insert type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_InsertValue type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_InsertValue type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_InsertValue type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_InsertValue type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_InsertValue type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_InsertValue type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_InsertValue type parameter seqan2::StringSet, seqan2::Array<100ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_InsertValue type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_InsertValue type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_InsertValue type parameter seqan2::StringSet, seqan2::Array<1000ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_InsertValue type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_InsertValue type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_InsertValue type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_InsertValue type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_InsertValue type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_InsertValue type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_InsertValue type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_InsertValue type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Iter type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_Iter type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Iter type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Iter type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_Iter type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Iter type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Iter type parameter seqan2::StringSet, seqan2::Array<100ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_Iter type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Iter type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Iter type parameter seqan2::StringSet, seqan2::Array<1000ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_Iter type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Iter type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Iter type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_Iter type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Iter type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Iter type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_Iter type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Iter type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Length type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_Length type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Length type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Length type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_Length type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Length type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Length type parameter seqan2::StringSet, seqan2::Array<100ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_Length type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Length type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Length type parameter seqan2::StringSet, seqan2::Array<1000ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_Length type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Length type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Length type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_Length type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Length type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Length type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_Length type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Length type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Resize type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_Resize type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Resize type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Resize type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_Resize type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Resize type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Resize type parameter seqan2::StringSet, seqan2::Array<100ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_Resize type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Resize type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Resize type parameter seqan2::StringSet, seqan2::Array<1000ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_Resize type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Resize type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Resize type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_Resize type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Resize type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Resize type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_Resize type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Resize type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Value type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_Value type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Value type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Value type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_Value type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Value type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Value type parameter seqan2::StringSet, seqan2::Array<100ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_Value type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Value type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Value type parameter seqan2::StringSet, seqan2::Array<1000ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_Value type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Value type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Value type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_Value type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Value type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Value type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_Value type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Value type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Infix type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_Infix type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Infix type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Infix type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_Infix type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Infix type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Infix type parameter seqan2::StringSet, seqan2::Array<100ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_Infix type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Infix type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Infix type parameter seqan2::StringSet, seqan2::Array<1000ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_Infix type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Infix type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Infix type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_Infix type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Infix type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Infix type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_Infix type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Infix type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Prefix type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_Prefix type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Prefix type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Prefix type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_Prefix type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Prefix type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Prefix type parameter seqan2::StringSet, seqan2::Array<100ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_Prefix type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Prefix type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Prefix type parameter seqan2::StringSet, seqan2::Array<1000ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_Prefix type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Prefix type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Prefix type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 96: StringTestCommon_LessEqualOperator type parameter seqan2::String >, unsigned long> > > OK 99: TEST SUITE test_simd_vector 99: SEQAN_ENABLE_DEBUG == 1 99: SEQAN_ENABLE_TESTING == 1 99: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 99: SEQAN_ASYNC_IO == 1 99: ************************************** 99: Total Tests: 0 99: Skipped: 0 99: Errors: 0 99: ************************************** 92/411 Test #99: test_test_simd_vector ............................................................. Passed 0.01 sec test 100 Start 100: test_test_simple_intervals_io 100: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_simple_intervals_io 100: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/simple_intervals_io 100: Test timeout computed to be: 10000000 96: StringTestCommon_LessEqualOperator type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_LessEqualOperator type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_LessEqualOperator type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_LessEqualOperator type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_LessEqualOperator type parameter seqan2::String > > OK 96: StringTestCommon_LessEqualOperator type parameter seqan2::String > > OK 96: StringTestCommon_LessEqualOperator type parameter seqan2::String > > OK 96: StringTestCommon_LessEqualOperator type parameter seqan2::String, seqan2::Array<100ul> > OK 96: StringTestCommon_LessEqualOperator type parameter seqan2::String > OK 96: StringTestCommon_LessEqualOperator type parameter seqan2::String > OK 96: StringTestCommon_LessEqualOperator type parameter seqan2::String > OK 96: StringTestCommon_LessEqualOperator type parameter seqan2::String, seqan2::Block<4096ul> > OK 96: StringTestCommon_LessEqualOperator type parameter seqan2::String > OK 96: StringTestCommon_LessEqualOperator type parameter seqan2::String > OK 96: StringTestCommon_LessEqualOperator type parameter seqan2::String > OK 96: StringTestCommon_LessEqualOperator type parameter seqan2::String, seqan2::Alloc > OK 96: StringTestCommon_LessEqualOperator type parameter seqan2::String > OK 96: StringTestCommon_LessEqualOperator type parameter seqan2::String > OK 96: StringTestCommon_LessEqualOperator type parameter seqan2::String > OK 96: StringTestCommon_LessEqualOperator type parameter std::__cxx11::basic_string, std::allocator > OK 96: StringTestCommon_LessEqualOperator type parameter std::vector, std::allocator > > OK 96: StringTestCommon_LessEqualOperator type parameter std::vector > OK 96: StringTestCommon_LessEqualOperator type parameter std::vector > OK 96: StringTestCommon_LessEqualOperator type parameter std::vector > OK 96: StringTestCommon_LessEqualOperator type parameter std::deque, std::allocator > > OK 96: StringTestCommon_LessEqualOperator type parameter std::deque > OK 96: StringTestCommon_LessEqualOperator type parameter std::deque > OK 96: StringTestCommon_LessEqualOperator type parameter std::deque > OK 96: StringTestCommon_LessEqualOperator type parameter std::forward_list, std::allocator > > OK 96: StringTestCommon_LessEqualOperator type parameter std::forward_list > OK 96: StringTestCommon_LessEqualOperator type parameter std::forward_list > OK 96: StringTestCommon_LessEqualOperator type parameter std::forward_list > OK 96: StringTestCommon_LessEqualOperator type parameter std::__cxx11::list, std::allocator > > OK 96: StringTestCommon_LessEqualOperator type parameter std::__cxx11::list > OK 96: StringTestCommon_LessEqualOperator type parameter std::__cxx11::list > OK 96: StringTestCommon_LessEqualOperator type parameter std::__cxx11::list > OK 96: StringTestCommon_GreaterOperator type parameter seqan2::String, seqan2::External >, 4194304u, 2u> > > OK 96: StringTestCommon_GreaterOperator type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_GreaterOperator type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_GreaterOperator type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_GreaterOperator type parameter seqan2::String, seqan2::MMap >, unsigned long> > > OK 97: StringSetTestCommon_Prefix type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Prefix type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Prefix type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_Prefix type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Prefix type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Suffix type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_Suffix type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Suffix type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Suffix type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_Suffix type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Suffix type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_Suffix type parameter seqan2::StringSet, seqan2::Array<100ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_Suffix type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Suffix type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Suffix type parameter seqan2::StringSet, seqan2::Array<1000ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_Suffix type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Suffix type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Suffix type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_Suffix type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Suffix type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Suffix type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_Suffix type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_Suffix type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_InfixOnValue type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_InfixOnValue type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_InfixOnValue type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_InfixOnValue type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_InfixOnValue type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_InfixOnValue type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_InfixOnValue type parameter seqan2::StringSet, seqan2::Array<100ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_InfixOnValue type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_InfixOnValue type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_InfixOnValue type parameter seqan2::StringSet, seqan2::Array<1000ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_InfixOnValue type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_InfixOnValue type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_InfixOnValue type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_InfixOnValue type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_InfixOnValue type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_InfixOnValue type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_InfixOnValue type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_InfixOnValue type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_PrefixOnValue type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_PrefixOnValue type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_PrefixOnValue type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_PrefixOnValue type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_PrefixOnValue type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_PrefixOnValue type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_PrefixOnValue type parameter seqan2::StringSet, seqan2::Array<100ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_PrefixOnValue type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_PrefixOnValue type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_PrefixOnValue type parameter seqan2::StringSet, seqan2::Array<1000ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_PrefixOnValue type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_PrefixOnValue type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_PrefixOnValue type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_PrefixOnValue type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_PrefixOnValue type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_PrefixOnValue type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_PrefixOnValue type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_PrefixOnValue type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_SuffixOnValue type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_SuffixOnValue type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_SuffixOnValue type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_SuffixOnValue type parameter seqan2::StringSet, seqan2::Packed > >, seqan2::Owner > > OK 97: StringSetTestCommon_SuffixOnValue type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_SuffixOnValue type parameter seqan2::StringSet > >, seqan2::Owner > > OK 97: StringSetTestCommon_SuffixOnValue type parameter seqan2::StringSet, seqan2::Array<100ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_SuffixOnValue type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_SuffixOnValue type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_SuffixOnValue type parameter seqan2::StringSet, seqan2::Array<1000ul> >, seqan2::Owner > > OK 97: StringSetTestCommon_SuffixOnValue type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_SuffixOnValue type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_SuffixOnValue type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_SuffixOnValue type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_SuffixOnValue type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_SuffixOnValue type parameter seqan2::StringSet, seqan2::Alloc >, seqan2::Owner > > OK 97: StringSetTestCommon_SuffixOnValue type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: StringSetTestCommon_SuffixOnValue type parameter seqan2::StringSet >, seqan2::Owner > > OK 97: ************************************** 97: Total Tests: 576 97: Skipped: 18 97: Errors: 0 97: ************************************** 94: test_seq_io_bam_file_bam_write_sequences OK 94: test_seq_io_bam_file_bam_write_sequences_and_qualities OK 100: TEST SUITE test_simple_intervals_io 100: SEQAN_ENABLE_DEBUG == 1 100: SEQAN_ENABLE_TESTING == 1 100: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 100: SEQAN_ASYNC_IO == 1 100: test_simple_intervals_io_read_records OK 100: test_simple_intervals_io_write_records OK 100: test_simple_intervals_io_smart_file_read OK 100: test_simple_intervals_io_smart_file_write OK 100: ************************************** 100: Total Tests: 4 100: Skipped: 0 100: Errors: 0 100: ************************************** 93/411 Test #97: test_test_stringset_v2 ............................................................ Passed 0.04 sec 94/411 Test #100: test_test_simple_intervals_io ..................................................... Passed 0.01 sec 96: StringTestCommon_GreaterOperator type parameter seqan2::String >, unsigned long> > > OK 94: ************************************** 94: Total Tests: 44 94: Skipped: 0 94: Errors: 0 94: ************************************** test 101 Start 101: test_test_statistics 101: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_statistics 101: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/statistics 101: Test timeout computed to be: 10000000 test 102 Start 102: test_test_store 102: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_store 102: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/store 102: Test timeout computed to be: 10000000 96: StringTestCommon_GreaterOperator type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_GreaterOperator type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_GreaterOperator type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_GreaterOperator type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_GreaterOperator type parameter seqan2::String > > OK 96: StringTestCommon_GreaterOperator type parameter seqan2::String > > OK 96: StringTestCommon_GreaterOperator type parameter seqan2::String > > OK 96: StringTestCommon_GreaterOperator type parameter seqan2::String, seqan2::Array<100ul> > OK 96: StringTestCommon_GreaterOperator type parameter seqan2::String > OK 96: StringTestCommon_GreaterOperator type parameter seqan2::String > OK 96: StringTestCommon_GreaterOperator type parameter seqan2::String > OK 96: StringTestCommon_GreaterOperator type parameter seqan2::String, seqan2::Block<4096ul> > OK 96: StringTestCommon_GreaterOperator type parameter seqan2::String > OK 96: StringTestCommon_GreaterOperator type parameter seqan2::String > OK 96: StringTestCommon_GreaterOperator type parameter seqan2::String > OK 96: StringTestCommon_GreaterOperator type parameter seqan2::String, seqan2::Alloc > OK 96: StringTestCommon_GreaterOperator type parameter seqan2::String > OK 96: StringTestCommon_GreaterOperator type parameter seqan2::String > OK 96: StringTestCommon_GreaterOperator type parameter seqan2::String > OK 96: StringTestCommon_GreaterOperator type parameter std::__cxx11::basic_string, std::allocator > OK 96: StringTestCommon_GreaterOperator type parameter std::vector, std::allocator > > OK 96: StringTestCommon_GreaterOperator type parameter std::vector > OK 96: StringTestCommon_GreaterOperator type parameter std::vector > OK 96: StringTestCommon_GreaterOperator type parameter std::vector > OK 96: StringTestCommon_GreaterOperator type parameter std::deque, std::allocator > > OK 96: StringTestCommon_GreaterOperator type parameter std::deque > OK 96: StringTestCommon_GreaterOperator type parameter std::deque > OK 96: StringTestCommon_GreaterOperator type parameter std::deque > OK 96: StringTestCommon_GreaterOperator type parameter std::forward_list, std::allocator > > OK 96: StringTestCommon_GreaterOperator type parameter std::forward_list > OK 96: StringTestCommon_GreaterOperator type parameter std::forward_list > OK 96: StringTestCommon_GreaterOperator type parameter std::forward_list > OK 96: StringTestCommon_GreaterOperator type parameter std::__cxx11::list, std::allocator > > OK 96: StringTestCommon_GreaterOperator type parameter std::__cxx11::list > OK 96: StringTestCommon_GreaterOperator type parameter std::__cxx11::list > OK 96: StringTestCommon_GreaterOperator type parameter std::__cxx11::list > OK 96: StringTestCommon_GreaterEqualOperator type parameter seqan2::String, seqan2::External >, 4194304u, 2u> > > OK 96: StringTestCommon_GreaterEqualOperator type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_GreaterEqualOperator type parameter seqan2::String >, 4194304u, 2u> > > OK 101: TEST SUITE test_statistics 101: SEQAN_ENABLE_DEBUG == 1 101: SEQAN_ENABLE_TESTING == 1 101: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 101: SEQAN_ASYNC_IO == 1 101: test_statistics_markov_model OK 95/411 Test #94: test_test_seq_io .................................................................. Passed 0.06 sec 96: StringTestCommon_GreaterEqualOperator type parameter seqan2::String >, 4194304u, 2u> > > OK test 103 Start 103: test_test_stream 103: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_stream 103: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/stream 103: Test timeout computed to be: 10000000 96: StringTestCommon_GreaterEqualOperator type parameter seqan2::String, seqan2::MMap >, unsigned long> > > OK 96: StringTestCommon_GreaterEqualOperator type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_GreaterEqualOperator type parameter seqan2::String >, unsigned long> > > OK 101: test_statistics_statistics OK 101: ************************************** 101: Total Tests: 2 101: Skipped: 0 101: Errors: 0 101: ************************************** 96/411 Test #101: test_test_statistics .............................................................. Passed 0.01 sec test 104 Start 104: test_test_find_swift 104: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_find_swift 104: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/swift_local 104: Test timeout computed to be: 10000000 96: StringTestCommon_GreaterEqualOperator type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_GreaterEqualOperator type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_GreaterEqualOperator type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_GreaterEqualOperator type parameter seqan2::String > > OK 96: StringTestCommon_GreaterEqualOperator type parameter seqan2::String > > OK 96: StringTestCommon_GreaterEqualOperator type parameter seqan2::String > > OK 96: StringTestCommon_GreaterEqualOperator type parameter seqan2::String, seqan2::Array<100ul> > OK 96: StringTestCommon_GreaterEqualOperator type parameter seqan2::String > OK 96: StringTestCommon_GreaterEqualOperator type parameter seqan2::String > OK 96: StringTestCommon_GreaterEqualOperator type parameter seqan2::String > OK 96: StringTestCommon_GreaterEqualOperator type parameter seqan2::String, seqan2::Block<4096ul> > OK 96: StringTestCommon_GreaterEqualOperator type parameter seqan2::String > OK 96: StringTestCommon_GreaterEqualOperator type parameter seqan2::String > OK 96: StringTestCommon_GreaterEqualOperator type parameter seqan2::String > OK 96: StringTestCommon_GreaterEqualOperator type parameter seqan2::String, seqan2::Alloc > OK 96: StringTestCommon_GreaterEqualOperator type parameter seqan2::String > OK 96: StringTestCommon_GreaterEqualOperator type parameter seqan2::String > OK 96: StringTestCommon_GreaterEqualOperator type parameter seqan2::String > OK 96: StringTestCommon_GreaterEqualOperator type parameter std::__cxx11::basic_string, std::allocator > OK 96: StringTestCommon_GreaterEqualOperator type parameter std::vector, std::allocator > > OK 96: StringTestCommon_GreaterEqualOperator type parameter std::vector > OK 96: StringTestCommon_GreaterEqualOperator type parameter std::vector > OK 96: StringTestCommon_GreaterEqualOperator type parameter std::vector > OK 96: StringTestCommon_GreaterEqualOperator type parameter std::deque, std::allocator > > OK 96: StringTestCommon_GreaterEqualOperator type parameter std::deque > OK 96: StringTestCommon_GreaterEqualOperator type parameter std::deque > OK 96: StringTestCommon_GreaterEqualOperator type parameter std::deque > OK 96: StringTestCommon_GreaterEqualOperator type parameter std::forward_list, std::allocator > > OK 96: StringTestCommon_GreaterEqualOperator type parameter std::forward_list > OK 96: StringTestCommon_GreaterEqualOperator type parameter std::forward_list > OK 96: StringTestCommon_GreaterEqualOperator type parameter std::forward_list > OK 96: StringTestCommon_GreaterEqualOperator type parameter std::__cxx11::list, std::allocator > > OK 96: StringTestCommon_GreaterEqualOperator type parameter std::__cxx11::list > OK 96: StringTestCommon_GreaterEqualOperator type parameter std::__cxx11::list > OK 96: StringTestCommon_GreaterEqualOperator type parameter std::__cxx11::list > OK 96: StringTestCommon_EqualOperator type parameter seqan2::String, seqan2::External >, 4194304u, 2u> > > OK 96: StringTestCommon_EqualOperator type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_EqualOperator type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_EqualOperator type parameter seqan2::String >, 4194304u, 2u> > > OK 104: TEST SUITE test_find_swift 104: SEQAN_ENABLE_DEBUG == 1 104: SEQAN_ENABLE_TESTING == 1 104: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 104: SEQAN_ASYNC_IO == 1 104: test_find_swift OK 104: test_longest_epsMatch OK 104: test_split_xDrop_align OK 104: ************************************** 104: Total Tests: 3 104: Skipped: 0 104: Errors: 0 104: ************************************** 97/411 Test #104: test_test_find_swift .............................................................. Passed 0.00 sec 103: TEST SUITE tests 103: SEQAN_ENABLE_DEBUG == 1 103: SEQAN_ENABLE_TESTING == 1 103: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 103: SEQAN_ASYNC_IO == 1 103: LexicalCastTest_UnsignedSource type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_UnsignedSource type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_UnsignedSource type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_UnsignedSource type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_UnsignedSource type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_UnsignedSource type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_UnsignedSource type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_UnsignedSource type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_UnsignedSource type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_UnsignedSource type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_UnsignedSource type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_UnsignedSource type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_UnsignedSource type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_UnsignedSource type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_UnsignedSource type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_UnsignedSource type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_UnsignedSource type parameter seqan2::Pair >, void> OK test 105 Start 105: test_test_tabix_io 105: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_tabix_io 105: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/tabix_io 105: Test timeout computed to be: 10000000 103: LexicalCastTest_UnsignedSource type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_UnsignedSource type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_UnsignedSource type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_SignedSource type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_SignedSource type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_SignedSource type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_SignedSource type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_SignedSource type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_SignedSource type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_SignedSource type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_SignedSource type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_SignedSource type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_SignedSource type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_SignedSource type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_SignedSource type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_SignedSource type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_SignedSource type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_SignedSource type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_SignedSource type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_SignedSource type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_SignedSource type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_SignedSource type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_SignedSource type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_FloatingPointSource type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_FloatingPointSource type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_FloatingPointSource type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_FloatingPointSource type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_FloatingPointSource type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_FloatingPointSource type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_FloatingPointSource type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_FloatingPointSource type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_FloatingPointSource type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_FloatingPointSource type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_FloatingPointSource type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_FloatingPointSource type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_FloatingPointSource type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_FloatingPointSource type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_FloatingPointSource type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_FloatingPointSource type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_FloatingPointSource type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_FloatingPointSource type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_FloatingPointSource type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_FloatingPointSource type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_WrongPrefixSource type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_WrongPrefixSource type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_WrongPrefixSource type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_WrongPrefixSource type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_WrongPrefixSource type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_WrongPrefixSource type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_WrongPrefixSource type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_WrongPrefixSource type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_WrongPrefixSource type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_WrongPrefixSource type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_WrongPrefixSource type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_WrongPrefixSource type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_WrongPrefixSource type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_WrongPrefixSource type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_WrongPrefixSource type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_WrongPrefixSource type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_WrongPrefixSource type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_WrongPrefixSource type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_WrongPrefixSource type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_WrongPrefixSource type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_WrongSuffixSource type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_WrongSuffixSource type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_WrongSuffixSource type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_WrongSuffixSource type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_WrongSuffixSource type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_WrongSuffixSource type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_WrongSuffixSource type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_WrongSuffixSource type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_WrongSuffixSource type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_WrongSuffixSource type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_WrongSuffixSource type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_WrongSuffixSource type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_WrongSuffixSource type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_WrongSuffixSource type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_WrongSuffixSource type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_WrongSuffixSource type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_WrongSuffixSource type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_WrongSuffixSource type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_WrongSuffixSource type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_WrongSuffixSource type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_Exception type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_Exception type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_Exception type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_Exception type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_Exception type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_Exception type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_Exception type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_Exception type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_Exception type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_Exception type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_Exception type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_Exception type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_Exception type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_Exception type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_Exception type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_Exception type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_Exception type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_Exception type parameter seqan2::Pair, std::allocator >, void> OK 103: LexicalCastTest_Exception type parameter seqan2::Pair >, void> OK 103: LexicalCastTest_Exception type parameter seqan2::Pair, std::allocator >, void> OK 103: AppendUnsignedTest_AppendNumber type parameter seqan2::Pair >, short, void> OK 103: AppendUnsignedTest_AppendNumber type parameter seqan2::Pair >, int, void> OK 103: AppendUnsignedTest_AppendNumber type parameter seqan2::Pair >, long, void> OK 103: AppendUnsignedTest_AppendNumber type parameter seqan2::Pair >, long long, void> OK 103: AppendUnsignedTest_AppendNumber type parameter seqan2::Pair >, unsigned short, void> OK 103: AppendUnsignedTest_AppendNumber type parameter seqan2::Pair >, unsigned int, void> OK 103: AppendUnsignedTest_AppendNumber type parameter seqan2::Pair >, unsigned long, void> OK 103: AppendUnsignedTest_AppendNumber type parameter seqan2::Pair >, unsigned long long, void> OK 103: AppendUnsignedTest_AppendNumber type parameter seqan2::Pair >, float, void> OK 103: AppendUnsignedTest_AppendNumber type parameter seqan2::Pair >, double, void> OK 103: AppendSignedTest_AppendNumber type parameter seqan2::Pair >, short, void> OK 103: AppendSignedTest_AppendNumber type parameter seqan2::Pair >, int, void> OK 103: AppendSignedTest_AppendNumber type parameter seqan2::Pair >, long, void> OK 103: AppendSignedTest_AppendNumber type parameter seqan2::Pair >, long long, void> OK 103: AppendSignedTest_AppendNumber type parameter seqan2::Pair >, float, void> OK 103: AppendSignedTest_AppendNumber type parameter seqan2::Pair >, double, void> OK 103: AppendFloatingPointTest_AppendNumber type parameter seqan2::Pair >, float, void> OK 103: AppendFloatingPointTest_AppendNumber type parameter seqan2::Pair >, double, void> OK 103: TokenizationTest_read type parameter seqan2::String > OK 103: TokenizationTest_read type parameter std::basic_ifstream > OK 103: TokenizationTest_read type parameter std::basic_fstream > OK 103: TokenizationTest_read type parameter seqan2::Iter >, seqan2::StreamIterator > > OK 103: TokenizationTest_ReadIgnoring type parameter seqan2::String > OK 103: TokenizationTest_ReadIgnoring type parameter std::basic_ifstream > OK 103: TokenizationTest_ReadIgnoring type parameter std::basic_fstream > OK 103: TokenizationTest_ReadIgnoring type parameter seqan2::Iter >, seqan2::StreamIterator > > OK 103: TokenizationTest_ReadUntil_ReadLine type parameter seqan2::String > OK 103: TokenizationTest_ReadUntil_ReadLine type parameter std::basic_ifstream > OK 103: TokenizationTest_ReadUntil_ReadLine type parameter std::basic_fstream > OK 103: TokenizationTest_ReadUntil_ReadLine type parameter seqan2::Iter >, seqan2::StreamIterator > > OK 103: TokenizationTest_SkipUntil type parameter seqan2::String > OK 103: TokenizationTest_SkipUntil type parameter std::basic_ifstream > OK 103: TokenizationTest_SkipUntil type parameter std::basic_fstream > OK 103: TokenizationTest_SkipUntil type parameter seqan2::Iter >, seqan2::StreamIterator > > OK 103: TokenizationTest_SkipLine type parameter seqan2::String > OK 103: TokenizationTest_SkipLine type parameter std::basic_ifstream > OK 103: TokenizationTest_SkipLine type parameter std::basic_fstream > OK 103: TokenizationTest_SkipLine type parameter seqan2::Iter >, seqan2::StreamIterator > > OK 96: StringTestCommon_EqualOperator type parameter seqan2::String, seqan2::MMap >, unsigned long> > > OK 102: TEST SUITE test_store 102: SEQAN_ENABLE_DEBUG == 1 102: SEQAN_ENABLE_TESTING == 1 102: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 102: SEQAN_ASYNC_IO == 1 105: TEST SUITE test_tabix_io 105: SEQAN_ENABLE_DEBUG == 1 105: SEQAN_ENABLE_TESTING == 1 105: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 105: SEQAN_ASYNC_IO == 1 96: StringTestCommon_EqualOperator type parameter seqan2::String >, unsigned long> > > OK 102: test_store_io_read_ucsc_known_genes OK 73: stop reader #3 18018 73: stop reader #2 69662 73: stop reader #1 12320 73: throughput: 184415 values/s 73: cap: 30 73: test_parallel_queue_spmc_fixedsize OK 103: FileStreamTest_ReadSimpleUsage type parameter seqan2::Async OK 102: test_store_io_read_ucsc_known_genes_and_isoforms OK 102: test_store_io_write_ucsc_known_genes OK 102: test_store_io_read_gff OK 102: test_store_io_write_gff OK 102: test_store_io_read_gtf OK 102: test_store_io_write_gtf OK 102: test_store_io_readwrite_amos OK 103: FileStreamTest_ReadSimpleUsage type parameter seqan2::MMap >, unsigned long> > OK 103: FileStreamTest_ReadComplexUsage type parameter seqan2::Async OK 103: FileStreamTest_ReadComplexUsage type parameter seqan2::MMap >, unsigned long> > OK 103: FileStreamTest_WriteSimpleUsage type parameter seqan2::Async OK 103: FileStreamTest_WriteSimpleUsage type parameter seqan2::MMap >, unsigned long> > OK 103: FileStreamTest_WriteComplexUsage type parameter seqan2::Async OK 103: FileStreamTest_WriteComplexUsage type parameter seqan2::MMap >, unsigned long> > OK 103: FileStreamTest_Eof type parameter seqan2::Async OK 103: FileStreamTest_Eof type parameter seqan2::MMap >, unsigned long> > OK 103: FileStreamTest_Seek type parameter seqan2::Async OK 103: FileStreamTest_Seek type parameter seqan2::MMap >, unsigned long> > OK 103: FileStreamTest_Tell type parameter seqan2::Async OK 103: FileStreamTest_Tell type parameter seqan2::MMap >, unsigned long> > OK 73: threads: 4 73: writers: 1 102: test_store_io_read_amos OK 96: StringTestCommon_EqualOperator type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_EqualOperator type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_EqualOperator type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_EqualOperator type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_EqualOperator type parameter seqan2::String > > OK 96: StringTestCommon_EqualOperator type parameter seqan2::String > > OK 96: StringTestCommon_EqualOperator type parameter seqan2::String > > OK 96: StringTestCommon_EqualOperator type parameter seqan2::String, seqan2::Array<100ul> > OK 96: StringTestCommon_EqualOperator type parameter seqan2::String > OK 96: StringTestCommon_EqualOperator type parameter seqan2::String > OK 96: StringTestCommon_EqualOperator type parameter seqan2::String > OK 96: StringTestCommon_EqualOperator type parameter seqan2::String, seqan2::Block<4096ul> > OK 96: StringTestCommon_EqualOperator type parameter seqan2::String > OK 96: StringTestCommon_EqualOperator type parameter seqan2::String > OK 96: StringTestCommon_EqualOperator type parameter seqan2::String > OK 96: StringTestCommon_EqualOperator type parameter seqan2::String, seqan2::Alloc > OK 96: StringTestCommon_EqualOperator type parameter seqan2::String > OK 96: StringTestCommon_EqualOperator type parameter seqan2::String > OK 96: StringTestCommon_EqualOperator type parameter seqan2::String > OK 96: StringTestCommon_EqualOperator type parameter std::__cxx11::basic_string, std::allocator > OK 96: StringTestCommon_EqualOperator type parameter std::vector, std::allocator > > OK 96: StringTestCommon_EqualOperator type parameter std::vector > OK 96: StringTestCommon_EqualOperator type parameter std::vector > OK 96: StringTestCommon_EqualOperator type parameter std::vector > OK 96: StringTestCommon_EqualOperator type parameter std::deque, std::allocator > > OK 96: StringTestCommon_EqualOperator type parameter std::deque > OK 96: StringTestCommon_EqualOperator type parameter std::deque > OK 96: StringTestCommon_EqualOperator type parameter std::deque > OK 96: StringTestCommon_EqualOperator type parameter std::forward_list, std::allocator > > OK 96: StringTestCommon_EqualOperator type parameter std::forward_list > OK 96: StringTestCommon_EqualOperator type parameter std::forward_list > OK 96: StringTestCommon_EqualOperator type parameter std::forward_list > OK 96: StringTestCommon_EqualOperator type parameter std::__cxx11::list, std::allocator > > OK 96: StringTestCommon_EqualOperator type parameter std::__cxx11::list > OK 96: StringTestCommon_EqualOperator type parameter std::__cxx11::list > OK 96: StringTestCommon_EqualOperator type parameter std::__cxx11::list > OK 96: StringTestCommon_UnequalOperator type parameter seqan2::String, seqan2::External >, 4194304u, 2u> > > OK 96: StringTestCommon_UnequalOperator type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_UnequalOperator type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_UnequalOperator type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_UnequalOperator type parameter seqan2::String, seqan2::MMap >, unsigned long> > > OK 96: StringTestCommon_UnequalOperator type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_UnequalOperator type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_UnequalOperator type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_UnequalOperator type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_UnequalOperator type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_UnequalOperator type parameter seqan2::String > > OK 96: StringTestCommon_UnequalOperator type parameter seqan2::String > > OK 96: StringTestCommon_UnequalOperator type parameter seqan2::String > > OK 96: StringTestCommon_UnequalOperator type parameter seqan2::String, seqan2::Array<100ul> > OK 96: StringTestCommon_UnequalOperator type parameter seqan2::String > OK 96: StringTestCommon_UnequalOperator type parameter seqan2::String > OK 96: StringTestCommon_UnequalOperator type parameter seqan2::String > OK 96: StringTestCommon_UnequalOperator type parameter seqan2::String, seqan2::Block<4096ul> > OK 96: StringTestCommon_UnequalOperator type parameter seqan2::String > OK 96: StringTestCommon_UnequalOperator type parameter seqan2::String > OK 96: StringTestCommon_UnequalOperator type parameter seqan2::String > OK 96: StringTestCommon_UnequalOperator type parameter seqan2::String, seqan2::Alloc > OK 96: StringTestCommon_UnequalOperator type parameter seqan2::String > OK 96: StringTestCommon_UnequalOperator type parameter seqan2::String > OK 96: StringTestCommon_UnequalOperator type parameter seqan2::String > OK 96: StringTestCommon_UnequalOperator type parameter std::__cxx11::basic_string, std::allocator > OK 96: StringTestCommon_UnequalOperator type parameter std::vector, std::allocator > > OK 96: StringTestCommon_UnequalOperator type parameter std::vector > OK 96: StringTestCommon_UnequalOperator type parameter std::vector > OK 96: StringTestCommon_UnequalOperator type parameter std::vector > OK 96: StringTestCommon_UnequalOperator type parameter std::deque, std::allocator > > OK 96: StringTestCommon_UnequalOperator type parameter std::deque > OK 96: StringTestCommon_UnequalOperator type parameter std::deque > OK 96: StringTestCommon_UnequalOperator type parameter std::deque > OK 96: StringTestCommon_UnequalOperator type parameter std::forward_list, std::allocator > > OK 96: StringTestCommon_UnequalOperator type parameter std::forward_list > OK 96: StringTestCommon_UnequalOperator type parameter std::forward_list > OK 96: StringTestCommon_UnequalOperator type parameter std::forward_list > OK 96: StringTestCommon_UnequalOperator type parameter std::__cxx11::list, std::allocator > > OK 96: StringTestCommon_UnequalOperator type parameter std::__cxx11::list > OK 96: StringTestCommon_UnequalOperator type parameter std::__cxx11::list > OK 96: StringTestCommon_UnequalOperator type parameter std::__cxx11::list > OK 96: StringTestCommon_Assign type parameter seqan2::String, seqan2::External >, 4194304u, 2u> > > OK 96: StringTestCommon_Assign type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_Assign type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_Assign type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_Assign type parameter seqan2::String, seqan2::MMap >, unsigned long> > > OK 96: StringTestCommon_Assign type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_Assign type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_Assign type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_Assign type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_Assign type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_Assign type parameter seqan2::String > > OK 96: StringTestCommon_Assign type parameter seqan2::String > > OK 96: StringTestCommon_Assign type parameter seqan2::String > > OK 96: StringTestCommon_Assign type parameter seqan2::String, seqan2::Array<100ul> > OK 96: StringTestCommon_Assign type parameter seqan2::String > OK 96: StringTestCommon_Assign type parameter seqan2::String > OK 96: StringTestCommon_Assign type parameter seqan2::String > OK 96: StringTestCommon_Assign type parameter seqan2::String, seqan2::Block<4096ul> > OK 96: StringTestCommon_Assign type parameter seqan2::String > OK 96: StringTestCommon_Assign type parameter seqan2::String > OK 96: StringTestCommon_Assign type parameter seqan2::String > OK 96: StringTestCommon_Assign type parameter seqan2::String, seqan2::Alloc > OK 96: StringTestCommon_Assign type parameter seqan2::String > OK 96: StringTestCommon_Assign type parameter seqan2::String > OK 96: StringTestCommon_Assign type parameter seqan2::String > OK 96: StringTestCommon_Assign type parameter std::__cxx11::basic_string, std::allocator > OK 96: StringTestCommon_Assign type parameter std::vector, std::allocator > > OK 96: StringTestCommon_Assign type parameter std::vector > OK 96: StringTestCommon_Assign type parameter std::vector > OK 96: StringTestCommon_Assign type parameter std::vector > OK 96: StringTestCommon_Assign type parameter std::deque, std::allocator > > OK 96: StringTestCommon_Assign type parameter std::deque > OK 96: StringTestCommon_Assign type parameter std::deque > OK 96: StringTestCommon_Assign type parameter std::deque > OK 96: StringTestCommon_Assign type parameter std::forward_list, std::allocator > > OK 96: StringTestCommon_Assign type parameter std::forward_list > OK 96: StringTestCommon_Assign type parameter std::forward_list > OK 96: StringTestCommon_Assign type parameter std::forward_list > OK 96: StringTestCommon_Assign type parameter std::__cxx11::list, std::allocator > > OK 96: StringTestCommon_Assign type parameter std::__cxx11::list > OK 96: StringTestCommon_Assign type parameter std::__cxx11::list > OK 96: StringTestCommon_Assign type parameter std::__cxx11::list > OK 96: StringTestCommon_OperatorAssign type parameter seqan2::String, seqan2::External >, 4194304u, 2u> > > OK 96: StringTestCommon_OperatorAssign type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_OperatorAssign type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_OperatorAssign type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_OperatorAssign type parameter seqan2::String, seqan2::MMap >, unsigned long> > > OK 96: StringTestCommon_OperatorAssign type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_OperatorAssign type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_OperatorAssign type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_OperatorAssign type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_OperatorAssign type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_OperatorAssign type parameter seqan2::String > > OK 96: StringTestCommon_OperatorAssign type parameter seqan2::String > > OK 96: StringTestCommon_OperatorAssign type parameter seqan2::String > > OK 96: StringTestCommon_OperatorAssign type parameter seqan2::String, seqan2::Array<100ul> > OK 96: StringTestCommon_OperatorAssign type parameter seqan2::String > OK 96: StringTestCommon_OperatorAssign type parameter seqan2::String > OK 96: StringTestCommon_OperatorAssign type parameter seqan2::String > OK 96: StringTestCommon_OperatorAssign type parameter seqan2::String, seqan2::Block<4096ul> > OK 96: StringTestCommon_OperatorAssign type parameter seqan2::String > OK 96: StringTestCommon_OperatorAssign type parameter seqan2::String > OK 96: StringTestCommon_OperatorAssign type parameter seqan2::String > OK 96: StringTestCommon_OperatorAssign type parameter seqan2::String, seqan2::Alloc > OK 96: StringTestCommon_OperatorAssign type parameter seqan2::String > OK 96: StringTestCommon_OperatorAssign type parameter seqan2::String > OK 96: StringTestCommon_OperatorAssign type parameter seqan2::String > OK 96: StringTestCommon_OperatorAssign type parameter std::__cxx11::basic_string, std::allocator > OK 96: StringTestCommon_OperatorAssign type parameter std::vector, std::allocator > > OK 96: StringTestCommon_OperatorAssign type parameter std::vector > OK 96: StringTestCommon_OperatorAssign type parameter std::vector > OK 96: StringTestCommon_OperatorAssign type parameter std::vector > OK 96: StringTestCommon_OperatorAssign type parameter std::deque, std::allocator > > OK 96: StringTestCommon_OperatorAssign type parameter std::deque > OK 96: StringTestCommon_OperatorAssign type parameter std::deque > OK 96: StringTestCommon_OperatorAssign type parameter std::deque > OK 96: StringTestCommon_OperatorAssign type parameter std::forward_list, std::allocator > > OK 96: StringTestCommon_OperatorAssign type parameter std::forward_list > OK 96: StringTestCommon_OperatorAssign type parameter std::forward_list > OK 96: StringTestCommon_OperatorAssign type parameter std::forward_list > OK 96: StringTestCommon_OperatorAssign type parameter std::__cxx11::list, std::allocator > > OK 96: StringTestCommon_OperatorAssign type parameter std::__cxx11::list > OK 96: StringTestCommon_OperatorAssign type parameter std::__cxx11::list > OK 96: StringTestCommon_OperatorAssign type parameter std::__cxx11::list > OK 96: StringTestCommon_Swap type parameter seqan2::String, seqan2::External >, 4194304u, 2u> > > OK 96: StringTestCommon_Swap type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_Swap type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_Swap type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_Swap type parameter seqan2::String, seqan2::MMap >, unsigned long> > > OK 96: StringTestCommon_Swap type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_Swap type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_Swap type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_Swap type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_Swap type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_Swap type parameter seqan2::String > > OK 96: StringTestCommon_Swap type parameter seqan2::String > > OK 96: StringTestCommon_Swap type parameter seqan2::String > > OK 96: StringTestCommon_Swap type parameter seqan2::String, seqan2::Array<100ul> > OK 96: StringTestCommon_Swap type parameter seqan2::String > OK 96: StringTestCommon_Swap type parameter seqan2::String > OK 96: StringTestCommon_Swap type parameter seqan2::String > OK 96: StringTestCommon_Swap type parameter seqan2::String, seqan2::Block<4096ul> > OK 96: StringTestCommon_Swap type parameter seqan2::String > OK 96: StringTestCommon_Swap type parameter seqan2::String > OK 96: StringTestCommon_Swap type parameter seqan2::String > OK 96: StringTestCommon_Swap type parameter seqan2::String, seqan2::Alloc > OK 96: StringTestCommon_Swap type parameter seqan2::String > OK 96: StringTestCommon_Swap type parameter seqan2::String > OK 96: StringTestCommon_Swap type parameter seqan2::String > OK 96: StringTestCommon_Swap type parameter std::__cxx11::basic_string, std::allocator > OK 96: StringTestCommon_Swap type parameter std::vector, std::allocator > > OK 96: StringTestCommon_Swap type parameter std::vector > OK 96: StringTestCommon_Swap type parameter std::vector > OK 96: StringTestCommon_Swap type parameter std::vector > OK 96: StringTestCommon_Swap type parameter std::deque, std::allocator > > OK 96: StringTestCommon_Swap type parameter std::deque > OK 96: StringTestCommon_Swap type parameter std::deque > OK 96: StringTestCommon_Swap type parameter std::deque > OK 96: StringTestCommon_Swap type parameter std::forward_list, std::allocator > > OK 96: StringTestCommon_Swap type parameter std::forward_list > OK 96: StringTestCommon_Swap type parameter std::forward_list > OK 96: StringTestCommon_Swap type parameter std::forward_list > OK 96: StringTestCommon_Swap type parameter std::__cxx11::list, std::allocator > > OK 96: StringTestCommon_Swap type parameter std::__cxx11::list > OK 96: StringTestCommon_Swap type parameter std::__cxx11::list > OK 96: StringTestCommon_Swap type parameter std::__cxx11::list > OK 96: StringTestCommon_Reverse type parameter seqan2::String, seqan2::External >, 4194304u, 2u> > > OK 96: StringTestCommon_Reverse type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_Reverse type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_Reverse type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_Reverse type parameter seqan2::String, seqan2::MMap >, unsigned long> > > OK 96: StringTestCommon_Reverse type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_Reverse type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_Reverse type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_Reverse type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_Reverse type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_Reverse type parameter seqan2::String > > OK 96: StringTestCommon_Reverse type parameter seqan2::String > > OK 96: StringTestCommon_Reverse type parameter seqan2::String > > OK 96: StringTestCommon_Reverse type parameter seqan2::String, seqan2::Array<100ul> > OK 96: StringTestCommon_Reverse type parameter seqan2::String > OK 96: StringTestCommon_Reverse type parameter seqan2::String > OK 96: StringTestCommon_Reverse type parameter seqan2::String > OK 96: StringTestCommon_Reverse type parameter seqan2::String, seqan2::Block<4096ul> > OK 96: StringTestCommon_Reverse type parameter seqan2::String > OK 96: StringTestCommon_Reverse type parameter seqan2::String > OK 96: StringTestCommon_Reverse type parameter seqan2::String > OK 96: StringTestCommon_Reverse type parameter seqan2::String, seqan2::Alloc > OK 96: StringTestCommon_Reverse type parameter seqan2::String > OK 96: StringTestCommon_Reverse type parameter seqan2::String > OK 96: StringTestCommon_Reverse type parameter seqan2::String > OK 96: StringTestCommon_Reverse type parameter std::__cxx11::basic_string, std::allocator > OK 96: StringTestCommon_Reverse type parameter std::vector, std::allocator > > OK 96: StringTestCommon_Reverse type parameter std::vector > OK 96: StringTestCommon_Reverse type parameter std::vector > OK 96: StringTestCommon_Reverse type parameter std::vector > OK 96: StringTestCommon_Reverse type parameter std::deque, std::allocator > > OK 96: StringTestCommon_Reverse type parameter std::deque > OK 96: StringTestCommon_Reverse type parameter std::deque > OK 96: StringTestCommon_Reverse type parameter std::deque > OK 96: StringTestCommon_Reverse type parameter std::forward_list, std::allocator > > OK 96: StringTestCommon_Reverse type parameter std::forward_list > OK 96: StringTestCommon_Reverse type parameter std::forward_list > OK 96: StringTestCommon_Reverse type parameter std::forward_list > OK 96: StringTestCommon_Reverse type parameter std::__cxx11::list, std::allocator > > OK 96: StringTestCommon_Reverse type parameter std::__cxx11::list > OK 96: StringTestCommon_Reverse type parameter std::__cxx11::list > OK 96: StringTestCommon_Reverse type parameter std::__cxx11::list > OK 96: StringTestCommon_AssignValue type parameter seqan2::String, seqan2::External >, 4194304u, 2u> > > OK 96: StringTestCommon_AssignValue type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_AssignValue type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_AssignValue type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_AssignValue type parameter seqan2::String, seqan2::MMap >, unsigned long> > > OK 96: StringTestCommon_AssignValue type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_AssignValue type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_AssignValue type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_AssignValue type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_AssignValue type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_AssignValue type parameter seqan2::String > > OK 96: StringTestCommon_AssignValue type parameter seqan2::String > > OK 96: StringTestCommon_AssignValue type parameter seqan2::String > > OK 96: StringTestCommon_AssignValue type parameter seqan2::String, seqan2::Array<100ul> > OK 96: StringTestCommon_AssignValue type parameter seqan2::String > OK 96: StringTestCommon_AssignValue type parameter seqan2::String > OK 96: StringTestCommon_AssignValue type parameter seqan2::String > OK 96: StringTestCommon_AssignValue type parameter seqan2::String, seqan2::Block<4096ul> > OK 96: StringTestCommon_AssignValue type parameter seqan2::String > OK 96: StringTestCommon_AssignValue type parameter seqan2::String > OK 96: StringTestCommon_AssignValue type parameter seqan2::String > OK 96: StringTestCommon_AssignValue type parameter seqan2::String, seqan2::Alloc > OK 96: StringTestCommon_AssignValue type parameter seqan2::String > OK 96: StringTestCommon_AssignValue type parameter seqan2::String > OK 96: StringTestCommon_AssignValue type parameter seqan2::String > OK 96: StringTestCommon_AssignValue type parameter std::__cxx11::basic_string, std::allocator > OK 96: StringTestCommon_AssignValue type parameter std::vector, std::allocator > > OK 96: StringTestCommon_AssignValue type parameter std::vector > OK 96: StringTestCommon_AssignValue type parameter std::vector > OK 96: StringTestCommon_AssignValue type parameter std::vector > OK 96: StringTestCommon_AssignValue type parameter std::deque, std::allocator > > OK 96: StringTestCommon_AssignValue type parameter std::deque > OK 96: StringTestCommon_AssignValue type parameter std::deque > OK 96: StringTestCommon_AssignValue type parameter std::deque > OK 96: StringTestCommon_AssignValue type parameter std::forward_list, std::allocator > > OK 96: StringTestCommon_AssignValue type parameter std::forward_list > OK 96: StringTestCommon_AssignValue type parameter std::forward_list > OK 96: StringTestCommon_AssignValue type parameter std::forward_list > OK 96: StringTestCommon_AssignValue type parameter std::__cxx11::list, std::allocator > > OK 96: StringTestCommon_AssignValue type parameter std::__cxx11::list > OK 96: StringTestCommon_AssignValue type parameter std::__cxx11::list > OK 96: StringTestCommon_AssignValue type parameter std::__cxx11::list > OK 96: StringTestCommon_Append type parameter seqan2::String, seqan2::External >, 4194304u, 2u> > > OK 96: StringTestCommon_Append type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_Append type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_Append type parameter seqan2::String >, 4194304u, 2u> > > OK 105: test_tabix_io_read_indexed_vcf OK 105: ************************************** 105: Total Tests: 1 105: Skipped: 0 105: Errors: 0 105: ************************************** 96: StringTestCommon_Append type parameter seqan2::String, seqan2::MMap >, unsigned long> > > OK 96: StringTestCommon_Append type parameter seqan2::String >, unsigned long> > > OK 98/411 Test #105: test_test_tabix_io ................................................................ Passed 0.05 sec test 106 Start 106: test_translation 106: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_translation 106: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/translation 106: Test timeout computed to be: 10000000 96: StringTestCommon_Append type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_Append type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_Append type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_Append type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_Append type parameter seqan2::String > > OK 96: StringTestCommon_Append type parameter seqan2::String > > OK 96: StringTestCommon_Append type parameter seqan2::String > > OK 96: StringTestCommon_Append type parameter seqan2::String, seqan2::Array<100ul> > OK 96: StringTestCommon_Append type parameter seqan2::String > OK 96: StringTestCommon_Append type parameter seqan2::String > OK 96: StringTestCommon_Append type parameter seqan2::String > OK 96: StringTestCommon_Append type parameter seqan2::String, seqan2::Block<4096ul> > OK 96: StringTestCommon_Append type parameter seqan2::String > OK 96: StringTestCommon_Append type parameter seqan2::String > OK 96: StringTestCommon_Append type parameter seqan2::String > OK 96: StringTestCommon_Append type parameter seqan2::String, seqan2::Alloc > OK 96: StringTestCommon_Append type parameter seqan2::String > OK 96: StringTestCommon_Append type parameter seqan2::String > OK 96: StringTestCommon_Append type parameter seqan2::String > OK 96: StringTestCommon_Append type parameter std::__cxx11::basic_string, std::allocator > OK 96: StringTestCommon_Append type parameter std::vector, std::allocator > > OK 96: StringTestCommon_Append type parameter std::vector > OK 96: StringTestCommon_Append type parameter std::vector > OK 96: StringTestCommon_Append type parameter std::vector > OK 96: StringTestCommon_Append type parameter std::deque, std::allocator > > OK 96: StringTestCommon_Append type parameter std::deque > OK 96: StringTestCommon_Append type parameter std::deque > OK 96: StringTestCommon_Append type parameter std::deque > OK 96: StringTestCommon_Append type parameter std::forward_list, std::allocator > > OK 96: StringTestCommon_Append type parameter std::forward_list > OK 96: StringTestCommon_Append type parameter std::forward_list > OK 96: StringTestCommon_Append type parameter std::forward_list > OK 96: StringTestCommon_Append type parameter std::__cxx11::list, std::allocator > > OK 96: StringTestCommon_Append type parameter std::__cxx11::list > OK 96: StringTestCommon_Append type parameter std::__cxx11::list > OK 96: StringTestCommon_Append type parameter std::__cxx11::list > OK 96: StringTestCommon_AppendValue type parameter seqan2::String, seqan2::External >, 4194304u, 2u> > > OK 96: StringTestCommon_AppendValue type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_AppendValue type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_AppendValue type parameter seqan2::String >, 4194304u, 2u> > > OK 106: TEST SUITE test_translation 106: SEQAN_ENABLE_DEBUG == 1 106: SEQAN_ENABLE_TESTING == 1 106: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 106: SEQAN_ASYNC_IO == 1 106: test_translation_onestring_singleframe_allcodes OK 106: test_translation_onestring_singleframe_allcodes_runtime OK 106: test_translation_onestring_multiframe_serial OK 106: test_translation_onestring_multiframe_concatdirect_serial OK 106: test_translation_stringset_multiframe_serial OK 96: StringTestCommon_AppendValue type parameter seqan2::String, seqan2::MMap >, unsigned long> > > OK 96: StringTestCommon_AppendValue type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_AppendValue type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_AppendValue type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_AppendValue type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_AppendValue type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_AppendValue type parameter seqan2::String > > OK 96: StringTestCommon_AppendValue type parameter seqan2::String > > OK 96: StringTestCommon_AppendValue type parameter seqan2::String > > OK 96: StringTestCommon_AppendValue type parameter seqan2::String, seqan2::Array<100ul> > OK 96: StringTestCommon_AppendValue type parameter seqan2::String > OK 96: StringTestCommon_AppendValue type parameter seqan2::String > OK 96: StringTestCommon_AppendValue type parameter seqan2::String > OK 96: StringTestCommon_AppendValue type parameter seqan2::String, seqan2::Block<4096ul> > OK 96: StringTestCommon_AppendValue type parameter seqan2::String > OK 96: StringTestCommon_AppendValue type parameter seqan2::String > OK 96: StringTestCommon_AppendValue type parameter seqan2::String > OK 96: StringTestCommon_AppendValue type parameter seqan2::String, seqan2::Alloc > OK 96: StringTestCommon_AppendValue type parameter seqan2::String > OK 96: StringTestCommon_AppendValue type parameter seqan2::String > OK 96: StringTestCommon_AppendValue type parameter seqan2::String > OK 96: StringTestCommon_AppendValue type parameter std::__cxx11::basic_string, std::allocator > OK 96: StringTestCommon_AppendValue type parameter std::vector, std::allocator > > OK 96: StringTestCommon_AppendValue type parameter std::vector > OK 96: StringTestCommon_AppendValue type parameter std::vector > OK 96: StringTestCommon_AppendValue type parameter std::vector > OK 96: StringTestCommon_AppendValue type parameter std::deque, std::allocator > > OK 96: StringTestCommon_AppendValue type parameter std::deque > OK 96: StringTestCommon_AppendValue type parameter std::deque > OK 96: StringTestCommon_AppendValue type parameter std::deque > OK 96: StringTestCommon_AppendValue type parameter std::forward_list, std::allocator > > OK 96: StringTestCommon_AppendValue type parameter std::forward_list > OK 96: StringTestCommon_AppendValue type parameter std::forward_list > OK 96: StringTestCommon_AppendValue type parameter std::forward_list > OK 96: StringTestCommon_AppendValue type parameter std::__cxx11::list, std::allocator > > OK 96: StringTestCommon_AppendValue type parameter std::__cxx11::list > OK 96: StringTestCommon_AppendValue type parameter std::__cxx11::list > OK 96: StringTestCommon_AppendValue type parameter std::__cxx11::list > OK 96: StringTestCommon_Back type parameter seqan2::String, seqan2::External >, 4194304u, 2u> > > OK 96: StringTestCommon_Back type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_Back type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_Back type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_Back type parameter seqan2::String, seqan2::MMap >, unsigned long> > > OK 96: StringTestCommon_Back type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_Back type parameter seqan2::String >, unsigned long> > > OK 73: stop reader #1 32274 73: stop reader #2 9670 73: stop reader #3 58056 73: throughput: 1857769 values/s 73: cap: 33923 73: test_parallel_queue_spmc_dynamicsize OK 73: threads: 3 73: writers: 2 102: test_store_io_write_amos OK 96: StringTestCommon_Back type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_Back type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_Back type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_Back type parameter seqan2::String > > OK 96: StringTestCommon_Back type parameter seqan2::String > > OK 96: StringTestCommon_Back type parameter seqan2::String > > OK 96: StringTestCommon_Back type parameter seqan2::String, seqan2::Array<100ul> > OK 96: StringTestCommon_Back type parameter seqan2::String > OK 96: StringTestCommon_Back type parameter seqan2::String > OK 96: StringTestCommon_Back type parameter seqan2::String > OK 96: StringTestCommon_Back type parameter seqan2::String, seqan2::Block<4096ul> > OK 96: StringTestCommon_Back type parameter seqan2::String > OK 96: StringTestCommon_Back type parameter seqan2::String > OK 96: StringTestCommon_Back type parameter seqan2::String > OK 96: StringTestCommon_Back type parameter seqan2::String, seqan2::Alloc > OK 96: StringTestCommon_Back type parameter seqan2::String > OK 96: StringTestCommon_Back type parameter seqan2::String > OK 96: StringTestCommon_Back type parameter seqan2::String > OK 96: StringTestCommon_Back type parameter std::__cxx11::basic_string, std::allocator > OK 96: StringTestCommon_Back type parameter std::vector, std::allocator > > OK 96: StringTestCommon_Back type parameter std::vector > OK 96: StringTestCommon_Back type parameter std::vector > OK 96: StringTestCommon_Back type parameter std::vector > OK 96: StringTestCommon_Back type parameter std::deque, std::allocator > > OK 96: StringTestCommon_Back type parameter std::deque > OK 96: StringTestCommon_Back type parameter std::deque > OK 96: StringTestCommon_Back type parameter std::deque > OK 96: StringTestCommon_Back type parameter std::forward_list, std::allocator > > OK 96: StringTestCommon_Back type parameter std::forward_list > OK 96: StringTestCommon_Back type parameter std::forward_list > OK 96: StringTestCommon_Back type parameter std::forward_list > OK 96: StringTestCommon_Back type parameter std::__cxx11::list, std::allocator > > OK 96: StringTestCommon_Back type parameter std::__cxx11::list > OK 96: StringTestCommon_Back type parameter std::__cxx11::list > OK 96: StringTestCommon_Back type parameter std::__cxx11::list > OK 96: StringTestCommon_Begin type parameter seqan2::String, seqan2::External >, 4194304u, 2u> > > OK 96: StringTestCommon_Begin type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_Begin type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_Begin type parameter seqan2::String >, 4194304u, 2u> > > OK 106: test_translation_stringset_multiframe_concatdirect_serial OK 96: StringTestCommon_Begin type parameter seqan2::String, seqan2::MMap >, unsigned long> > > OK 96: StringTestCommon_Begin type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_Begin type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_Begin type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_Begin type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_Begin type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_Begin type parameter seqan2::String > > OK 96: StringTestCommon_Begin type parameter seqan2::String > > OK 96: StringTestCommon_Begin type parameter seqan2::String > > OK 96: StringTestCommon_Begin type parameter seqan2::String, seqan2::Array<100ul> > OK 96: StringTestCommon_Begin type parameter seqan2::String > OK 96: StringTestCommon_Begin type parameter seqan2::String > OK 96: StringTestCommon_Begin type parameter seqan2::String > OK 96: StringTestCommon_Begin type parameter seqan2::String, seqan2::Block<4096ul> > OK 96: StringTestCommon_Begin type parameter seqan2::String > OK 96: StringTestCommon_Begin type parameter seqan2::String > OK 96: StringTestCommon_Begin type parameter seqan2::String > OK 96: StringTestCommon_Begin type parameter seqan2::String, seqan2::Alloc > OK 96: StringTestCommon_Begin type parameter seqan2::String > OK 96: StringTestCommon_Begin type parameter seqan2::String > OK 96: StringTestCommon_Begin type parameter seqan2::String > OK 96: StringTestCommon_Begin type parameter std::__cxx11::basic_string, std::allocator > OK 96: StringTestCommon_Begin type parameter std::vector, std::allocator > > OK 96: StringTestCommon_Begin type parameter std::vector > OK 96: StringTestCommon_Begin type parameter std::vector > OK 96: StringTestCommon_Begin type parameter std::vector > OK 96: StringTestCommon_Begin type parameter std::deque, std::allocator > > OK 96: StringTestCommon_Begin type parameter std::deque > OK 96: StringTestCommon_Begin type parameter std::deque > OK 96: StringTestCommon_Begin type parameter std::deque > OK 96: StringTestCommon_Begin type parameter std::forward_list, std::allocator > > OK 96: StringTestCommon_Begin type parameter std::forward_list > OK 96: StringTestCommon_Begin type parameter std::forward_list > OK 96: StringTestCommon_Begin type parameter std::forward_list > OK 96: StringTestCommon_Begin type parameter std::__cxx11::list, std::allocator > > OK 96: StringTestCommon_Begin type parameter std::__cxx11::list > OK 96: StringTestCommon_Begin type parameter std::__cxx11::list > OK 96: StringTestCommon_Begin type parameter std::__cxx11::list > OK 96: StringTestCommon_BeginPosition type parameter seqan2::String, seqan2::External >, 4194304u, 2u> > > OK 96: StringTestCommon_BeginPosition type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_BeginPosition type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_BeginPosition type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_BeginPosition type parameter seqan2::String, seqan2::MMap >, unsigned long> > > OK 96: StringTestCommon_BeginPosition type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_BeginPosition type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_BeginPosition type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_BeginPosition type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_BeginPosition type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_BeginPosition type parameter seqan2::String > > OK 96: StringTestCommon_BeginPosition type parameter seqan2::String > > OK 96: StringTestCommon_BeginPosition type parameter seqan2::String > > OK 96: StringTestCommon_BeginPosition type parameter seqan2::String, seqan2::Array<100ul> > OK 96: StringTestCommon_BeginPosition type parameter seqan2::String > OK 96: StringTestCommon_BeginPosition type parameter seqan2::String > OK 96: StringTestCommon_BeginPosition type parameter seqan2::String > OK 96: StringTestCommon_BeginPosition type parameter seqan2::String, seqan2::Block<4096ul> > OK 96: StringTestCommon_BeginPosition type parameter seqan2::String > OK 96: StringTestCommon_BeginPosition type parameter seqan2::String > OK 96: StringTestCommon_BeginPosition type parameter seqan2::String > OK 96: StringTestCommon_BeginPosition type parameter seqan2::String, seqan2::Alloc > OK 96: StringTestCommon_BeginPosition type parameter seqan2::String > OK 96: StringTestCommon_BeginPosition type parameter seqan2::String > OK 96: StringTestCommon_BeginPosition type parameter seqan2::String > OK 96: StringTestCommon_BeginPosition type parameter std::__cxx11::basic_string, std::allocator > OK 96: StringTestCommon_BeginPosition type parameter std::vector, std::allocator > > OK 96: StringTestCommon_BeginPosition type parameter std::vector > OK 96: StringTestCommon_BeginPosition type parameter std::vector > OK 96: StringTestCommon_BeginPosition type parameter std::vector > OK 96: StringTestCommon_BeginPosition type parameter std::deque, std::allocator > > OK 96: StringTestCommon_BeginPosition type parameter std::deque > OK 96: StringTestCommon_BeginPosition type parameter std::deque > OK 96: StringTestCommon_BeginPosition type parameter std::deque > OK 96: StringTestCommon_BeginPosition type parameter std::forward_list, std::allocator > > OK 96: StringTestCommon_BeginPosition type parameter std::forward_list > OK 96: StringTestCommon_BeginPosition type parameter std::forward_list > OK 96: StringTestCommon_BeginPosition type parameter std::forward_list > OK 96: StringTestCommon_BeginPosition type parameter std::__cxx11::list, std::allocator > > OK 96: StringTestCommon_BeginPosition type parameter std::__cxx11::list > OK 96: StringTestCommon_BeginPosition type parameter std::__cxx11::list > OK 96: StringTestCommon_BeginPosition type parameter std::__cxx11::list > OK 96: StringTestCommon_Capacity type parameter seqan2::String, seqan2::External >, 4194304u, 2u> > > OK 96: StringTestCommon_Capacity type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_Capacity type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_Capacity type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_Capacity type parameter seqan2::String, seqan2::MMap >, unsigned long> > > OK 96: StringTestCommon_Capacity type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_Capacity type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_Capacity type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_Capacity type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_Capacity type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_Capacity type parameter seqan2::String > > OK 96: StringTestCommon_Capacity type parameter seqan2::String > > OK 96: StringTestCommon_Capacity type parameter seqan2::String > > OK 96: StringTestCommon_Capacity type parameter seqan2::String, seqan2::Array<100ul> > OK 96: StringTestCommon_Capacity type parameter seqan2::String > OK 96: StringTestCommon_Capacity type parameter seqan2::String > OK 96: StringTestCommon_Capacity type parameter seqan2::String > OK 96: StringTestCommon_Capacity type parameter seqan2::String, seqan2::Block<4096ul> > OK 96: StringTestCommon_Capacity type parameter seqan2::String > OK 96: StringTestCommon_Capacity type parameter seqan2::String > OK 96: StringTestCommon_Capacity type parameter seqan2::String > OK 96: StringTestCommon_Capacity type parameter seqan2::String, seqan2::Alloc > OK 96: StringTestCommon_Capacity type parameter seqan2::String > OK 96: StringTestCommon_Capacity type parameter seqan2::String > OK 96: StringTestCommon_Capacity type parameter seqan2::String > OK 96: StringTestCommon_Capacity type parameter std::__cxx11::basic_string, std::allocator > OK 96: StringTestCommon_Capacity type parameter std::vector, std::allocator > > OK 96: StringTestCommon_Capacity type parameter std::vector > OK 96: StringTestCommon_Capacity type parameter std::vector > OK 96: StringTestCommon_Capacity type parameter std::vector > OK 96: StringTestCommon_Capacity type parameter std::deque, std::allocator > > OK 96: StringTestCommon_Capacity type parameter std::deque > OK 96: StringTestCommon_Capacity type parameter std::deque > OK 96: StringTestCommon_Capacity type parameter std::deque > OK 96: StringTestCommon_Capacity type parameter std::forward_list, std::allocator > > OK 96: StringTestCommon_Capacity type parameter std::forward_list > OK 96: StringTestCommon_Capacity type parameter std::forward_list > OK 96: StringTestCommon_Capacity type parameter std::forward_list > OK 96: StringTestCommon_Capacity type parameter std::__cxx11::list, std::allocator > > OK 96: StringTestCommon_Capacity type parameter std::__cxx11::list > OK 96: StringTestCommon_Capacity type parameter std::__cxx11::list > OK 96: StringTestCommon_Capacity type parameter std::__cxx11::list > OK 96: StringTestCommon_Clear type parameter seqan2::String, seqan2::External >, 4194304u, 2u> > > OK 96: StringTestCommon_Clear type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_Clear type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_Clear type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_Clear type parameter seqan2::String, seqan2::MMap >, unsigned long> > > OK 96: StringTestCommon_Clear type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_Clear type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_Clear type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_Clear type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_Clear type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_Clear type parameter seqan2::String > > OK 96: StringTestCommon_Clear type parameter seqan2::String > > OK 96: StringTestCommon_Clear type parameter seqan2::String > > OK 96: StringTestCommon_Clear type parameter seqan2::String, seqan2::Array<100ul> > OK 96: StringTestCommon_Clear type parameter seqan2::String > OK 96: StringTestCommon_Clear type parameter seqan2::String > OK 96: StringTestCommon_Clear type parameter seqan2::String > OK 96: StringTestCommon_Clear type parameter seqan2::String, seqan2::Block<4096ul> > OK 96: StringTestCommon_Clear type parameter seqan2::String > OK 96: StringTestCommon_Clear type parameter seqan2::String > OK 96: StringTestCommon_Clear type parameter seqan2::String > OK 96: StringTestCommon_Clear type parameter seqan2::String, seqan2::Alloc > OK 96: StringTestCommon_Clear type parameter seqan2::String > OK 96: StringTestCommon_Clear type parameter seqan2::String > OK 96: StringTestCommon_Clear type parameter seqan2::String > OK 96: StringTestCommon_Clear type parameter std::__cxx11::basic_string, std::allocator > OK 96: StringTestCommon_Clear type parameter std::vector, std::allocator > > OK 96: StringTestCommon_Clear type parameter std::vector > OK 96: StringTestCommon_Clear type parameter std::vector > OK 96: StringTestCommon_Clear type parameter std::vector > OK 96: StringTestCommon_Clear type parameter std::deque, std::allocator > > OK 96: StringTestCommon_Clear type parameter std::deque > OK 96: StringTestCommon_Clear type parameter std::deque > OK 96: StringTestCommon_Clear type parameter std::deque > OK 96: StringTestCommon_Clear type parameter std::forward_list, std::allocator > > OK 96: StringTestCommon_Clear type parameter std::forward_list > OK 96: StringTestCommon_Clear type parameter std::forward_list > OK 96: StringTestCommon_Clear type parameter std::forward_list > OK 96: StringTestCommon_Clear type parameter std::__cxx11::list, std::allocator > > OK 96: StringTestCommon_Clear type parameter std::__cxx11::list > OK 96: StringTestCommon_Clear type parameter std::__cxx11::list > OK 96: StringTestCommon_Clear type parameter std::__cxx11::list > OK 96: StringTestCommon_End type parameter seqan2::String, seqan2::External >, 4194304u, 2u> > > OK 96: StringTestCommon_End type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_End type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_End type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_End type parameter seqan2::String, seqan2::MMap >, unsigned long> > > OK 96: StringTestCommon_End type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_End type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_End type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_End type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_End type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_End type parameter seqan2::String > > OK 96: StringTestCommon_End type parameter seqan2::String > > OK 96: StringTestCommon_End type parameter seqan2::String > > OK 96: StringTestCommon_End type parameter seqan2::String, seqan2::Array<100ul> > OK 96: StringTestCommon_End type parameter seqan2::String > OK 96: StringTestCommon_End type parameter seqan2::String > OK 96: StringTestCommon_End type parameter seqan2::String > OK 96: StringTestCommon_End type parameter seqan2::String, seqan2::Block<4096ul> > OK 96: StringTestCommon_End type parameter seqan2::String > OK 96: StringTestCommon_End type parameter seqan2::String > OK 96: StringTestCommon_End type parameter seqan2::String > OK 96: StringTestCommon_End type parameter seqan2::String, seqan2::Alloc > OK 96: StringTestCommon_End type parameter seqan2::String > OK 96: StringTestCommon_End type parameter seqan2::String > OK 96: StringTestCommon_End type parameter seqan2::String > OK 96: StringTestCommon_End type parameter std::__cxx11::basic_string, std::allocator > OK 96: StringTestCommon_End type parameter std::vector, std::allocator > > OK 96: StringTestCommon_End type parameter std::vector > OK 96: StringTestCommon_End type parameter std::vector > OK 96: StringTestCommon_End type parameter std::vector > OK 96: StringTestCommon_End type parameter std::deque, std::allocator > > OK 96: StringTestCommon_End type parameter std::deque > OK 96: StringTestCommon_End type parameter std::deque > OK 96: StringTestCommon_End type parameter std::deque > OK 96: StringTestCommon_End type parameter std::forward_list, std::allocator > > OK 96: StringTestCommon_End type parameter std::forward_list > OK 96: StringTestCommon_End type parameter std::forward_list > OK 96: StringTestCommon_End type parameter std::forward_list > OK 96: StringTestCommon_End type parameter std::__cxx11::list, std::allocator > > OK 96: StringTestCommon_End type parameter std::__cxx11::list > OK 96: StringTestCommon_End type parameter std::__cxx11::list > OK 96: StringTestCommon_End type parameter std::__cxx11::list > OK 96: StringTestCommon_EndPosition type parameter seqan2::String, seqan2::External >, 4194304u, 2u> > > OK 96: StringTestCommon_EndPosition type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_EndPosition type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_EndPosition type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_EndPosition type parameter seqan2::String, seqan2::MMap >, unsigned long> > > OK 96: StringTestCommon_EndPosition type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_EndPosition type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_EndPosition type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_EndPosition type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_EndPosition type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_EndPosition type parameter seqan2::String > > OK 96: StringTestCommon_EndPosition type parameter seqan2::String > > OK 96: StringTestCommon_EndPosition type parameter seqan2::String > > OK 96: StringTestCommon_EndPosition type parameter seqan2::String, seqan2::Array<100ul> > OK 96: StringTestCommon_EndPosition type parameter seqan2::String > OK 96: StringTestCommon_EndPosition type parameter seqan2::String > OK 96: StringTestCommon_EndPosition type parameter seqan2::String > OK 96: StringTestCommon_EndPosition type parameter seqan2::String, seqan2::Block<4096ul> > OK 96: StringTestCommon_EndPosition type parameter seqan2::String > OK 96: StringTestCommon_EndPosition type parameter seqan2::String > OK 96: StringTestCommon_EndPosition type parameter seqan2::String > OK 96: StringTestCommon_EndPosition type parameter seqan2::String, seqan2::Alloc > OK 96: StringTestCommon_EndPosition type parameter seqan2::String > OK 96: StringTestCommon_EndPosition type parameter seqan2::String > OK 96: StringTestCommon_EndPosition type parameter seqan2::String > OK 96: StringTestCommon_EndPosition type parameter std::__cxx11::basic_string, std::allocator > OK 96: StringTestCommon_EndPosition type parameter std::vector, std::allocator > > OK 96: StringTestCommon_EndPosition type parameter std::vector > OK 96: StringTestCommon_EndPosition type parameter std::vector > OK 96: StringTestCommon_EndPosition type parameter std::vector > OK 96: StringTestCommon_EndPosition type parameter std::deque, std::allocator > > OK 96: StringTestCommon_EndPosition type parameter std::deque > OK 96: StringTestCommon_EndPosition type parameter std::deque > OK 96: StringTestCommon_EndPosition type parameter std::deque > OK 96: StringTestCommon_EndPosition type parameter std::forward_list, std::allocator > > OK 96: StringTestCommon_EndPosition type parameter std::forward_list > OK 96: StringTestCommon_EndPosition type parameter std::forward_list > OK 96: StringTestCommon_EndPosition type parameter std::forward_list > OK 96: StringTestCommon_EndPosition type parameter std::__cxx11::list, std::allocator > > OK 96: StringTestCommon_EndPosition type parameter std::__cxx11::list > OK 96: StringTestCommon_EndPosition type parameter std::__cxx11::list > OK 96: StringTestCommon_EndPosition type parameter std::__cxx11::list > OK 96: StringTestCommon_Erase type parameter seqan2::String, seqan2::External >, 4194304u, 2u> > > OK 96: StringTestCommon_Erase type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_Erase type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_Erase type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_Erase type parameter seqan2::String, seqan2::MMap >, unsigned long> > > OK 96: StringTestCommon_Erase type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_Erase type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_Erase type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_Erase type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_Erase type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_Erase type parameter seqan2::String > > OK 96: StringTestCommon_Erase type parameter seqan2::String > > OK 96: StringTestCommon_Erase type parameter seqan2::String > > OK 96: StringTestCommon_Erase type parameter seqan2::String, seqan2::Array<100ul> > OK 96: StringTestCommon_Erase type parameter seqan2::String > OK 96: StringTestCommon_Erase type parameter seqan2::String > OK 96: StringTestCommon_Erase type parameter seqan2::String > OK 96: StringTestCommon_Erase type parameter seqan2::String, seqan2::Block<4096ul> > OK 96: StringTestCommon_Erase type parameter seqan2::String > OK 96: StringTestCommon_Erase type parameter seqan2::String > OK 96: StringTestCommon_Erase type parameter seqan2::String > OK 96: StringTestCommon_Erase type parameter seqan2::String, seqan2::Alloc > OK 96: StringTestCommon_Erase type parameter seqan2::String > OK 96: StringTestCommon_Erase type parameter seqan2::String > OK 96: StringTestCommon_Erase type parameter seqan2::String > OK 96: StringTestCommon_Erase type parameter std::__cxx11::basic_string, std::allocator > OK 96: StringTestCommon_Erase type parameter std::vector, std::allocator > > OK 96: StringTestCommon_Erase type parameter std::vector > OK 96: StringTestCommon_Erase type parameter std::vector > OK 96: StringTestCommon_Erase type parameter std::vector > OK 96: StringTestCommon_Erase type parameter std::deque, std::allocator > > OK 96: StringTestCommon_Erase type parameter std::deque > OK 96: StringTestCommon_Erase type parameter std::deque > OK 96: StringTestCommon_Erase type parameter std::deque > OK 96: StringTestCommon_Erase type parameter std::forward_list, std::allocator > > OK 96: StringTestCommon_Erase type parameter std::forward_list > OK 96: StringTestCommon_Erase type parameter std::forward_list > OK 96: StringTestCommon_Erase type parameter std::forward_list > OK 96: StringTestCommon_Erase type parameter std::__cxx11::list, std::allocator > > OK 96: StringTestCommon_Erase type parameter std::__cxx11::list > OK 96: StringTestCommon_Erase type parameter std::__cxx11::list > OK 96: StringTestCommon_Erase type parameter std::__cxx11::list > OK 96: StringTestCommon_EraseBack type parameter seqan2::String, seqan2::External >, 4194304u, 2u> > > OK 96: StringTestCommon_EraseBack type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_EraseBack type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_EraseBack type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_EraseBack type parameter seqan2::String, seqan2::MMap >, unsigned long> > > OK 96: StringTestCommon_EraseBack type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_EraseBack type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_EraseBack type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_EraseBack type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_EraseBack type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_EraseBack type parameter seqan2::String > > OK 96: StringTestCommon_EraseBack type parameter seqan2::String > > OK 96: StringTestCommon_EraseBack type parameter seqan2::String > > OK 96: StringTestCommon_EraseBack type parameter seqan2::String, seqan2::Array<100ul> > OK 96: StringTestCommon_EraseBack type parameter seqan2::String > OK 96: StringTestCommon_EraseBack type parameter seqan2::String > OK 96: StringTestCommon_EraseBack type parameter seqan2::String > OK 96: StringTestCommon_EraseBack type parameter seqan2::String, seqan2::Block<4096ul> > OK 96: StringTestCommon_EraseBack type parameter seqan2::String > OK 96: StringTestCommon_EraseBack type parameter seqan2::String > OK 96: StringTestCommon_EraseBack type parameter seqan2::String > OK 96: StringTestCommon_EraseBack type parameter seqan2::String, seqan2::Alloc > OK 96: StringTestCommon_EraseBack type parameter seqan2::String > OK 96: StringTestCommon_EraseBack type parameter seqan2::String > OK 96: StringTestCommon_EraseBack type parameter seqan2::String > OK 96: StringTestCommon_EraseBack type parameter std::__cxx11::basic_string, std::allocator > OK 96: StringTestCommon_EraseBack type parameter std::vector, std::allocator > > OK 96: StringTestCommon_EraseBack type parameter std::vector > OK 96: StringTestCommon_EraseBack type parameter std::vector > OK 96: StringTestCommon_EraseBack type parameter std::vector > OK 96: StringTestCommon_EraseBack type parameter std::deque, std::allocator > > OK 96: StringTestCommon_EraseBack type parameter std::deque > OK 96: StringTestCommon_EraseBack type parameter std::deque > OK 96: StringTestCommon_EraseBack type parameter std::deque > OK 96: StringTestCommon_EraseBack type parameter std::forward_list, std::allocator > > OK 96: StringTestCommon_EraseBack type parameter std::forward_list > OK 96: StringTestCommon_EraseBack type parameter std::forward_list > OK 96: StringTestCommon_EraseBack type parameter std::forward_list > OK 96: StringTestCommon_EraseBack type parameter std::__cxx11::list, std::allocator > > OK 96: StringTestCommon_EraseBack type parameter std::__cxx11::list > OK 96: StringTestCommon_EraseBack type parameter std::__cxx11::list > OK 96: StringTestCommon_EraseBack type parameter std::__cxx11::list > OK 96: 1404 96: 1406 96: StringTestCommon_Front type parameter seqan2::String, seqan2::External >, 4194304u, 2u> > > OK 96: 1404 96: 1406 96: StringTestCommon_Front type parameter seqan2::String >, 4194304u, 2u> > > OK 96: 1404 96: 1406 96: StringTestCommon_Front type parameter seqan2::String >, 4194304u, 2u> > > OK 96: 1404 96: 1406 96: StringTestCommon_Front type parameter seqan2::String >, 4194304u, 2u> > > OK 96: 1404 96: 1406 96: StringTestCommon_Front type parameter seqan2::String, seqan2::MMap >, unsigned long> > > OK 96: 1404 96: 1406 96: StringTestCommon_Front type parameter seqan2::String >, unsigned long> > > OK 96: 1404 96: 1406 96: StringTestCommon_Front type parameter seqan2::String >, unsigned long> > > OK 96: 1404 106: test_translation_onestring_multiframe_parallel OK 96: 1406 96: StringTestCommon_Front type parameter seqan2::String >, unsigned long> > > OK 96: 1404 96: 1406 96: StringTestCommon_Front type parameter seqan2::String, seqan2::Packed > > OK 96: 1404 96: 1406 96: StringTestCommon_Front type parameter seqan2::String, seqan2::Packed > > OK 96: 1404 96: 1406 96: StringTestCommon_Front type parameter seqan2::String > > OK 96: 1404 96: 1406 96: StringTestCommon_Front type parameter seqan2::String > > OK 96: 1404 96: 1406 96: StringTestCommon_Front type parameter seqan2::String > > OK 96: 1404 96: 1406 96: StringTestCommon_Front type parameter seqan2::String, seqan2::Array<100ul> > OK 96: 1404 96: 1406 96: StringTestCommon_Front type parameter seqan2::String > OK 96: 1404 96: 1406 96: StringTestCommon_Front type parameter seqan2::String > OK 96: 1404 96: 1406 96: StringTestCommon_Front type parameter seqan2::String > OK 96: 1404 96: 1406 96: StringTestCommon_Front type parameter seqan2::String, seqan2::Block<4096ul> > OK 96: 1404 96: 1406 96: StringTestCommon_Front type parameter seqan2::String > OK 96: 1404 96: 1406 96: StringTestCommon_Front type parameter seqan2::String > OK 96: 1404 96: 1406 96: StringTestCommon_Front type parameter seqan2::String > OK 96: 1404 96: 1406 96: StringTestCommon_Front type parameter seqan2::String, seqan2::Alloc > OK 96: 1404 96: 1406 96: StringTestCommon_Front type parameter seqan2::String > OK 96: 1404 96: 1406 96: StringTestCommon_Front type parameter seqan2::String > OK 96: 1404 96: 1406 96: StringTestCommon_Front type parameter seqan2::String > OK 96: 1404 96: 1406 96: StringTestCommon_Front type parameter std::__cxx11::basic_string, std::allocator > OK 96: 1404 96: 1406 96: StringTestCommon_Front type parameter std::vector, std::allocator > > OK 96: 1404 96: 1406 96: StringTestCommon_Front type parameter std::vector > OK 96: 1404 96: 1406 96: StringTestCommon_Front type parameter std::vector > OK 96: 1404 96: 1406 96: StringTestCommon_Front type parameter std::vector > OK 96: 1404 96: 1406 96: StringTestCommon_Front type parameter std::deque, std::allocator > > OK 96: 1404 96: 1406 96: StringTestCommon_Front type parameter std::deque > OK 96: 1404 96: 1406 96: StringTestCommon_Front type parameter std::deque > OK 96: 1404 96: 1406 96: StringTestCommon_Front type parameter std::deque > OK 96: 1404 96: 1406 96: StringTestCommon_Front type parameter std::forward_list, std::allocator > > OK 96: 1404 96: 1406 96: StringTestCommon_Front type parameter std::forward_list > OK 96: 1404 96: 1406 96: StringTestCommon_Front type parameter std::forward_list > OK 96: 1404 96: 1406 96: StringTestCommon_Front type parameter std::forward_list > OK 96: 1404 96: 1406 96: StringTestCommon_Front type parameter std::__cxx11::list, std::allocator > > OK 96: 1404 96: 1406 96: StringTestCommon_Front type parameter std::__cxx11::list > OK 96: 1404 96: 1406 96: StringTestCommon_Front type parameter std::__cxx11::list > OK 96: 1404 96: 1406 96: StringTestCommon_Front type parameter std::__cxx11::list > OK 96: StringTestCommon_GetValue type parameter seqan2::String, seqan2::External >, 4194304u, 2u> > > SKIPPED 96: StringTestCommon_GetValue type parameter seqan2::String >, 4194304u, 2u> > > SKIPPED 96: StringTestCommon_GetValue type parameter seqan2::String >, 4194304u, 2u> > > SKIPPED 96: StringTestCommon_GetValue type parameter seqan2::String >, 4194304u, 2u> > > SKIPPED 96: StringTestCommon_GetValue type parameter seqan2::String, seqan2::MMap >, unsigned long> > > SKIPPED 96: StringTestCommon_GetValue type parameter seqan2::String >, unsigned long> > > SKIPPED 96: StringTestCommon_GetValue type parameter seqan2::String >, unsigned long> > > SKIPPED 96: StringTestCommon_GetValue type parameter seqan2::String >, unsigned long> > > SKIPPED 96: StringTestCommon_GetValue type parameter seqan2::String, seqan2::Packed > > SKIPPED 96: StringTestCommon_GetValue type parameter seqan2::String, seqan2::Packed > > SKIPPED 96: StringTestCommon_GetValue type parameter seqan2::String > > SKIPPED 96: StringTestCommon_GetValue type parameter seqan2::String > > SKIPPED 96: StringTestCommon_GetValue type parameter seqan2::String > > SKIPPED 96: StringTestCommon_GetValue type parameter seqan2::String, seqan2::Array<100ul> > SKIPPED 96: StringTestCommon_GetValue type parameter seqan2::String > SKIPPED 96: StringTestCommon_GetValue type parameter seqan2::String > SKIPPED 96: StringTestCommon_GetValue type parameter seqan2::String > SKIPPED 96: StringTestCommon_GetValue type parameter seqan2::String, seqan2::Block<4096ul> > SKIPPED 96: StringTestCommon_GetValue type parameter seqan2::String > SKIPPED 96: StringTestCommon_GetValue type parameter seqan2::String > SKIPPED 96: StringTestCommon_GetValue type parameter seqan2::String > SKIPPED 96: StringTestCommon_GetValue type parameter seqan2::String, seqan2::Alloc > SKIPPED 96: StringTestCommon_GetValue type parameter seqan2::String > SKIPPED 96: StringTestCommon_GetValue type parameter seqan2::String > SKIPPED 96: StringTestCommon_GetValue type parameter seqan2::String > SKIPPED 96: StringTestCommon_GetValue type parameter std::__cxx11::basic_string, std::allocator > SKIPPED 96: StringTestCommon_GetValue type parameter std::vector, std::allocator > > SKIPPED 96: StringTestCommon_GetValue type parameter std::vector > SKIPPED 96: StringTestCommon_GetValue type parameter std::vector > SKIPPED 96: StringTestCommon_GetValue type parameter std::vector > SKIPPED 96: StringTestCommon_GetValue type parameter std::deque, std::allocator > > SKIPPED 96: StringTestCommon_GetValue type parameter std::deque > SKIPPED 96: StringTestCommon_GetValue type parameter std::deque > SKIPPED 96: StringTestCommon_GetValue type parameter std::deque > SKIPPED 96: StringTestCommon_GetValue type parameter std::forward_list, std::allocator > > SKIPPED 96: StringTestCommon_GetValue type parameter std::forward_list > SKIPPED 96: StringTestCommon_GetValue type parameter std::forward_list > SKIPPED 96: StringTestCommon_GetValue type parameter std::forward_list > SKIPPED 96: StringTestCommon_GetValue type parameter std::__cxx11::list, std::allocator > > SKIPPED 96: StringTestCommon_GetValue type parameter std::__cxx11::list > SKIPPED 96: StringTestCommon_GetValue type parameter std::__cxx11::list > SKIPPED 96: StringTestCommon_GetValue type parameter std::__cxx11::list > SKIPPED 96: StringTestCommon_Insert type parameter seqan2::String, seqan2::External >, 4194304u, 2u> > > OK 96: StringTestCommon_Insert type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_Insert type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_Insert type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_Insert type parameter seqan2::String, seqan2::MMap >, unsigned long> > > OK 96: StringTestCommon_Insert type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_Insert type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_Insert type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_Insert type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_Insert type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_Insert type parameter seqan2::String > > OK 96: StringTestCommon_Insert type parameter seqan2::String > > OK 96: StringTestCommon_Insert type parameter seqan2::String > > OK 96: StringTestCommon_Insert type parameter seqan2::String, seqan2::Array<100ul> > OK 96: StringTestCommon_Insert type parameter seqan2::String > OK 96: StringTestCommon_Insert type parameter seqan2::String > OK 96: StringTestCommon_Insert type parameter seqan2::String > OK 96: StringTestCommon_Insert type parameter seqan2::String, seqan2::Block<4096ul> > OK 96: StringTestCommon_Insert type parameter seqan2::String > OK 96: StringTestCommon_Insert type parameter seqan2::String > OK 96: StringTestCommon_Insert type parameter seqan2::String > OK 96: StringTestCommon_Insert type parameter seqan2::String, seqan2::Alloc > OK 96: StringTestCommon_Insert type parameter seqan2::String > OK 96: StringTestCommon_Insert type parameter seqan2::String > OK 96: StringTestCommon_Insert type parameter seqan2::String > OK 96: StringTestCommon_Insert type parameter std::__cxx11::basic_string, std::allocator > OK 96: StringTestCommon_Insert type parameter std::vector, std::allocator > > OK 96: StringTestCommon_Insert type parameter std::vector > OK 96: StringTestCommon_Insert type parameter std::vector > OK 96: StringTestCommon_Insert type parameter std::vector > OK 96: StringTestCommon_Insert type parameter std::deque, std::allocator > > OK 96: StringTestCommon_Insert type parameter std::deque > OK 96: StringTestCommon_Insert type parameter std::deque > OK 96: StringTestCommon_Insert type parameter std::deque > OK 96: StringTestCommon_Insert type parameter std::forward_list, std::allocator > > OK 96: StringTestCommon_Insert type parameter std::forward_list > OK 96: StringTestCommon_Insert type parameter std::forward_list > OK 96: StringTestCommon_Insert type parameter std::forward_list > OK 96: StringTestCommon_Insert type parameter std::__cxx11::list, std::allocator > > OK 96: StringTestCommon_Insert type parameter std::__cxx11::list > OK 96: StringTestCommon_Insert type parameter std::__cxx11::list > OK 96: StringTestCommon_Insert type parameter std::__cxx11::list > OK 96: StringTestCommon_InsertValue type parameter seqan2::String, seqan2::External >, 4194304u, 2u> > > OK 96: StringTestCommon_InsertValue type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_InsertValue type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_InsertValue type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_InsertValue type parameter seqan2::String, seqan2::MMap >, unsigned long> > > OK 106: test_translation_onestring_multiframe_concatdirect_parallel OK 96: StringTestCommon_InsertValue type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_InsertValue type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_InsertValue type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_InsertValue type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_InsertValue type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_InsertValue type parameter seqan2::String > > OK 96: StringTestCommon_InsertValue type parameter seqan2::String > > OK 96: StringTestCommon_InsertValue type parameter seqan2::String > > OK 96: StringTestCommon_InsertValue type parameter seqan2::String, seqan2::Array<100ul> > OK 96: StringTestCommon_InsertValue type parameter seqan2::String > OK 96: StringTestCommon_InsertValue type parameter seqan2::String > OK 96: StringTestCommon_InsertValue type parameter seqan2::String > OK 96: StringTestCommon_InsertValue type parameter seqan2::String, seqan2::Block<4096ul> > OK 96: StringTestCommon_InsertValue type parameter seqan2::String > OK 96: StringTestCommon_InsertValue type parameter seqan2::String > OK 96: StringTestCommon_InsertValue type parameter seqan2::String > OK 96: StringTestCommon_InsertValue type parameter seqan2::String, seqan2::Alloc > OK 96: StringTestCommon_InsertValue type parameter seqan2::String > OK 96: StringTestCommon_InsertValue type parameter seqan2::String > OK 96: StringTestCommon_InsertValue type parameter seqan2::String > OK 96: StringTestCommon_InsertValue type parameter std::__cxx11::basic_string, std::allocator > OK 96: StringTestCommon_InsertValue type parameter std::vector, std::allocator > > OK 96: StringTestCommon_InsertValue type parameter std::vector > OK 96: StringTestCommon_InsertValue type parameter std::vector > OK 96: StringTestCommon_InsertValue type parameter std::vector > OK 96: StringTestCommon_InsertValue type parameter std::deque, std::allocator > > OK 96: StringTestCommon_InsertValue type parameter std::deque > OK 96: StringTestCommon_InsertValue type parameter std::deque > OK 96: StringTestCommon_InsertValue type parameter std::deque > OK 96: StringTestCommon_InsertValue type parameter std::forward_list, std::allocator > > OK 96: StringTestCommon_InsertValue type parameter std::forward_list > OK 96: StringTestCommon_InsertValue type parameter std::forward_list > OK 96: StringTestCommon_InsertValue type parameter std::forward_list > OK 96: StringTestCommon_InsertValue type parameter std::__cxx11::list, std::allocator > > OK 96: StringTestCommon_InsertValue type parameter std::__cxx11::list > OK 96: StringTestCommon_InsertValue type parameter std::__cxx11::list > OK 96: StringTestCommon_InsertValue type parameter std::__cxx11::list > OK 96: StringTestCommon_Iter type parameter seqan2::String, seqan2::External >, 4194304u, 2u> > > OK 96: StringTestCommon_Iter type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_Iter type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_Iter type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_Iter type parameter seqan2::String, seqan2::MMap >, unsigned long> > > OK 96: StringTestCommon_Iter type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_Iter type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_Iter type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_Iter type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_Iter type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_Iter type parameter seqan2::String > > OK 96: StringTestCommon_Iter type parameter seqan2::String > > OK 96: StringTestCommon_Iter type parameter seqan2::String > > OK 96: StringTestCommon_Iter type parameter seqan2::String, seqan2::Array<100ul> > OK 96: StringTestCommon_Iter type parameter seqan2::String > OK 96: StringTestCommon_Iter type parameter seqan2::String > OK 96: StringTestCommon_Iter type parameter seqan2::String > OK 96: StringTestCommon_Iter type parameter seqan2::String, seqan2::Block<4096ul> > OK 103: FileStreamTest_ReadLarge type parameter seqan2::Async OK 96: StringTestCommon_Iter type parameter seqan2::String > OK 96: StringTestCommon_Iter type parameter seqan2::String > OK 96: StringTestCommon_Iter type parameter seqan2::String > OK 96: StringTestCommon_Iter type parameter seqan2::String, seqan2::Alloc > OK 96: StringTestCommon_Iter type parameter seqan2::String > OK 96: StringTestCommon_Iter type parameter seqan2::String > OK 96: StringTestCommon_Iter type parameter seqan2::String > OK 96: StringTestCommon_Iter type parameter std::__cxx11::basic_string, std::allocator > OK 96: StringTestCommon_Iter type parameter std::vector, std::allocator > > OK 96: StringTestCommon_Iter type parameter std::vector > OK 96: StringTestCommon_Iter type parameter std::vector > OK 96: StringTestCommon_Iter type parameter std::vector > OK 96: StringTestCommon_Iter type parameter std::deque, std::allocator > > OK 96: StringTestCommon_Iter type parameter std::deque > OK 96: StringTestCommon_Iter type parameter std::deque > OK 96: StringTestCommon_Iter type parameter std::deque > OK 96: StringTestCommon_Iter type parameter std::forward_list, std::allocator > > OK 96: StringTestCommon_Iter type parameter std::forward_list > OK 96: StringTestCommon_Iter type parameter std::forward_list > OK 96: StringTestCommon_Iter type parameter std::forward_list > OK 96: StringTestCommon_Iter type parameter std::__cxx11::list, std::allocator > > OK 96: StringTestCommon_Iter type parameter std::__cxx11::list > OK 96: StringTestCommon_Iter type parameter std::__cxx11::list > OK 96: StringTestCommon_Iter type parameter std::__cxx11::list > OK 96: StringTestCommon_Length type parameter seqan2::String, seqan2::External >, 4194304u, 2u> > > OK 96: StringTestCommon_Length type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_Length type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_Length type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_Length type parameter seqan2::String, seqan2::MMap >, unsigned long> > > OK 96: StringTestCommon_Length type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_Length type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_Length type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_Length type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_Length type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_Length type parameter seqan2::String > > OK 96: StringTestCommon_Length type parameter seqan2::String > > OK 96: StringTestCommon_Length type parameter seqan2::String > > OK 96: StringTestCommon_Length type parameter seqan2::String, seqan2::Array<100ul> > OK 96: StringTestCommon_Length type parameter seqan2::String > OK 96: StringTestCommon_Length type parameter seqan2::String > OK 96: StringTestCommon_Length type parameter seqan2::String > OK 96: StringTestCommon_Length type parameter seqan2::String, seqan2::Block<4096ul> > OK 96: StringTestCommon_Length type parameter seqan2::String > OK 96: StringTestCommon_Length type parameter seqan2::String > OK 96: StringTestCommon_Length type parameter seqan2::String > OK 96: StringTestCommon_Length type parameter seqan2::String, seqan2::Alloc > OK 96: StringTestCommon_Length type parameter seqan2::String > OK 96: StringTestCommon_Length type parameter seqan2::String > OK 96: StringTestCommon_Length type parameter seqan2::String > OK 96: StringTestCommon_Length type parameter std::__cxx11::basic_string, std::allocator > OK 96: StringTestCommon_Length type parameter std::vector, std::allocator > > OK 96: StringTestCommon_Length type parameter std::vector > OK 96: StringTestCommon_Length type parameter std::vector > OK 96: StringTestCommon_Length type parameter std::vector > OK 96: StringTestCommon_Length type parameter std::deque, std::allocator > > OK 96: StringTestCommon_Length type parameter std::deque > OK 96: StringTestCommon_Length type parameter std::deque > OK 96: StringTestCommon_Length type parameter std::deque > OK 96: StringTestCommon_Length type parameter std::forward_list, std::allocator > > OK 96: StringTestCommon_Length type parameter std::forward_list > OK 96: StringTestCommon_Length type parameter std::forward_list > OK 96: StringTestCommon_Length type parameter std::forward_list > OK 96: StringTestCommon_Length type parameter std::__cxx11::list, std::allocator > > OK 96: StringTestCommon_Length type parameter std::__cxx11::list > OK 96: StringTestCommon_Length type parameter std::__cxx11::list > OK 96: StringTestCommon_Length type parameter std::__cxx11::list > OK 96: StringTestCommon_MoveValue type parameter seqan2::String, seqan2::External >, 4194304u, 2u> > > OK 96: StringTestCommon_MoveValue type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_MoveValue type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_MoveValue type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_MoveValue type parameter seqan2::String, seqan2::MMap >, unsigned long> > > OK 96: StringTestCommon_MoveValue type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_MoveValue type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_MoveValue type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_MoveValue type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_MoveValue type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_MoveValue type parameter seqan2::String > > OK 96: StringTestCommon_MoveValue type parameter seqan2::String > > OK 96: StringTestCommon_MoveValue type parameter seqan2::String > > OK 96: StringTestCommon_MoveValue type parameter seqan2::String, seqan2::Array<100ul> > OK 96: StringTestCommon_MoveValue type parameter seqan2::String > OK 96: StringTestCommon_MoveValue type parameter seqan2::String > OK 96: StringTestCommon_MoveValue type parameter seqan2::String > OK 96: StringTestCommon_MoveValue type parameter seqan2::String, seqan2::Block<4096ul> > OK 96: StringTestCommon_MoveValue type parameter seqan2::String > OK 96: StringTestCommon_MoveValue type parameter seqan2::String > OK 96: StringTestCommon_MoveValue type parameter seqan2::String > OK 96: StringTestCommon_MoveValue type parameter seqan2::String, seqan2::Alloc > OK 96: StringTestCommon_MoveValue type parameter seqan2::String > OK 96: StringTestCommon_MoveValue type parameter seqan2::String > OK 96: StringTestCommon_MoveValue type parameter seqan2::String > OK 96: StringTestCommon_MoveValue type parameter std::__cxx11::basic_string, std::allocator > OK 96: StringTestCommon_MoveValue type parameter std::vector, std::allocator > > OK 96: StringTestCommon_MoveValue type parameter std::vector > OK 96: StringTestCommon_MoveValue type parameter std::vector > OK 96: StringTestCommon_MoveValue type parameter std::vector > OK 96: StringTestCommon_MoveValue type parameter std::deque, std::allocator > > OK 96: StringTestCommon_MoveValue type parameter std::deque > OK 96: StringTestCommon_MoveValue type parameter std::deque > OK 96: StringTestCommon_MoveValue type parameter std::deque > OK 96: StringTestCommon_MoveValue type parameter std::forward_list, std::allocator > > OK 96: StringTestCommon_MoveValue type parameter std::forward_list > OK 96: StringTestCommon_MoveValue type parameter std::forward_list > OK 96: StringTestCommon_MoveValue type parameter std::forward_list > OK 96: StringTestCommon_MoveValue type parameter std::__cxx11::list, std::allocator > > OK 96: StringTestCommon_MoveValue type parameter std::__cxx11::list > OK 96: StringTestCommon_MoveValue type parameter std::__cxx11::list > OK 96: StringTestCommon_MoveValue type parameter std::__cxx11::list > OK 96: StringTestCommon_Replace type parameter seqan2::String, seqan2::External >, 4194304u, 2u> > > OK 96: StringTestCommon_Replace type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_Replace type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_Replace type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_Replace type parameter seqan2::String, seqan2::MMap >, unsigned long> > > OK 96: StringTestCommon_Replace type parameter seqan2::String >, unsigned long> > > OK 102: test_store_io_sam OK 96: StringTestCommon_Replace type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_Replace type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_Replace type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_Replace type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_Replace type parameter seqan2::String > > OK 96: StringTestCommon_Replace type parameter seqan2::String > > OK 96: StringTestCommon_Replace type parameter seqan2::String > > OK 96: StringTestCommon_Replace type parameter seqan2::String, seqan2::Array<100ul> > OK 96: StringTestCommon_Replace type parameter seqan2::String > OK 96: StringTestCommon_Replace type parameter seqan2::String > OK 96: StringTestCommon_Replace type parameter seqan2::String > OK 96: StringTestCommon_Replace type parameter seqan2::String, seqan2::Block<4096ul> > OK 96: StringTestCommon_Replace type parameter seqan2::String > OK 96: StringTestCommon_Replace type parameter seqan2::String > OK 96: StringTestCommon_Replace type parameter seqan2::String > OK 96: StringTestCommon_Replace type parameter seqan2::String, seqan2::Alloc > OK 96: StringTestCommon_Replace type parameter seqan2::String > OK 96: StringTestCommon_Replace type parameter seqan2::String > OK 96: StringTestCommon_Replace type parameter seqan2::String > OK 96: StringTestCommon_Replace type parameter std::__cxx11::basic_string, std::allocator > OK 96: StringTestCommon_Replace type parameter std::vector, std::allocator > > OK 96: StringTestCommon_Replace type parameter std::vector > OK 96: StringTestCommon_Replace type parameter std::vector > OK 96: StringTestCommon_Replace type parameter std::vector > OK 96: StringTestCommon_Replace type parameter std::deque, std::allocator > > OK 96: StringTestCommon_Replace type parameter std::deque > OK 96: StringTestCommon_Replace type parameter std::deque > OK 96: StringTestCommon_Replace type parameter std::deque > OK 96: StringTestCommon_Replace type parameter std::forward_list, std::allocator > > OK 96: StringTestCommon_Replace type parameter std::forward_list > OK 96: StringTestCommon_Replace type parameter std::forward_list > OK 96: StringTestCommon_Replace type parameter std::forward_list > OK 96: StringTestCommon_Replace type parameter std::__cxx11::list, std::allocator > > OK 96: StringTestCommon_Replace type parameter std::__cxx11::list > OK 96: StringTestCommon_Replace type parameter std::__cxx11::list > OK 96: StringTestCommon_Replace type parameter std::__cxx11::list > OK 96: StringTestCommon_Reserve type parameter seqan2::String, seqan2::External >, 4194304u, 2u> > > OK 96: StringTestCommon_Reserve type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_Reserve type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_Reserve type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_Reserve type parameter seqan2::String, seqan2::MMap >, unsigned long> > > OK 96: StringTestCommon_Reserve type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_Reserve type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_Reserve type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_Reserve type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_Reserve type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_Reserve type parameter seqan2::String > > OK 96: StringTestCommon_Reserve type parameter seqan2::String > > OK 96: StringTestCommon_Reserve type parameter seqan2::String > > OK 96: StringTestCommon_Reserve type parameter seqan2::String, seqan2::Array<100ul> > OK 96: StringTestCommon_Reserve type parameter seqan2::String > OK 96: StringTestCommon_Reserve type parameter seqan2::String > OK 96: StringTestCommon_Reserve type parameter seqan2::String > OK 96: StringTestCommon_Reserve type parameter seqan2::String, seqan2::Block<4096ul> > OK 96: StringTestCommon_Reserve type parameter seqan2::String > OK 96: StringTestCommon_Reserve type parameter seqan2::String > OK 96: StringTestCommon_Reserve type parameter seqan2::String > OK 96: StringTestCommon_Reserve type parameter seqan2::String, seqan2::Alloc > OK 96: StringTestCommon_Reserve type parameter seqan2::String > OK 96: StringTestCommon_Reserve type parameter seqan2::String > OK 96: StringTestCommon_Reserve type parameter seqan2::String > OK 96: StringTestCommon_Reserve type parameter std::__cxx11::basic_string, std::allocator > OK 96: StringTestCommon_Reserve type parameter std::vector, std::allocator > > OK 96: StringTestCommon_Reserve type parameter std::vector > OK 96: StringTestCommon_Reserve type parameter std::vector > OK 96: StringTestCommon_Reserve type parameter std::vector > OK 96: StringTestCommon_Reserve type parameter std::deque, std::allocator > > OK 96: StringTestCommon_Reserve type parameter std::deque > OK 96: StringTestCommon_Reserve type parameter std::deque > OK 96: StringTestCommon_Reserve type parameter std::deque > OK 96: StringTestCommon_Reserve type parameter std::forward_list, std::allocator > > OK 96: StringTestCommon_Reserve type parameter std::forward_list > OK 96: StringTestCommon_Reserve type parameter std::forward_list > OK 96: StringTestCommon_Reserve type parameter std::forward_list > OK 96: StringTestCommon_Reserve type parameter std::__cxx11::list, std::allocator > > OK 96: StringTestCommon_Reserve type parameter std::__cxx11::list > OK 96: StringTestCommon_Reserve type parameter std::__cxx11::list > OK 96: StringTestCommon_Reserve type parameter std::__cxx11::list > OK 96: StringTestCommon_Resize type parameter seqan2::String, seqan2::External >, 4194304u, 2u> > > OK 96: StringTestCommon_Resize type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_Resize type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_Resize type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_Resize type parameter seqan2::String, seqan2::MMap >, unsigned long> > > OK 96: StringTestCommon_Resize type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_Resize type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_Resize type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_Resize type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_Resize type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_Resize type parameter seqan2::String > > OK 96: StringTestCommon_Resize type parameter seqan2::String > > OK 96: StringTestCommon_Resize type parameter seqan2::String > > OK 96: StringTestCommon_Resize type parameter seqan2::String, seqan2::Array<100ul> > OK 96: StringTestCommon_Resize type parameter seqan2::String > OK 96: StringTestCommon_Resize type parameter seqan2::String > OK 96: StringTestCommon_Resize type parameter seqan2::String > OK 96: StringTestCommon_Resize type parameter seqan2::String, seqan2::Block<4096ul> > OK 96: StringTestCommon_Resize type parameter seqan2::String > OK 96: StringTestCommon_Resize type parameter seqan2::String > OK 96: StringTestCommon_Resize type parameter seqan2::String > OK 96: StringTestCommon_Resize type parameter seqan2::String, seqan2::Alloc > OK 96: StringTestCommon_Resize type parameter seqan2::String > OK 96: StringTestCommon_Resize type parameter seqan2::String > OK 96: StringTestCommon_Resize type parameter seqan2::String > OK 96: StringTestCommon_Resize type parameter std::__cxx11::basic_string, std::allocator > OK 96: StringTestCommon_Resize type parameter std::vector, std::allocator > > OK 96: StringTestCommon_Resize type parameter std::vector > OK 96: StringTestCommon_Resize type parameter std::vector > OK 96: StringTestCommon_Resize type parameter std::vector > OK 96: StringTestCommon_Resize type parameter std::deque, std::allocator > > OK 96: StringTestCommon_Resize type parameter std::deque > OK 96: StringTestCommon_Resize type parameter std::deque > OK 96: StringTestCommon_Resize type parameter std::deque > OK 96: StringTestCommon_Resize type parameter std::forward_list, std::allocator > > OK 96: StringTestCommon_Resize type parameter std::forward_list > OK 96: StringTestCommon_Resize type parameter std::forward_list > OK 96: StringTestCommon_Resize type parameter std::forward_list > OK 96: StringTestCommon_Resize type parameter std::__cxx11::list, std::allocator > > OK 96: StringTestCommon_Resize type parameter std::__cxx11::list > OK 96: StringTestCommon_Resize type parameter std::__cxx11::list > OK 96: StringTestCommon_Resize type parameter std::__cxx11::list > OK 96: StringTestCommon_Value type parameter seqan2::String, seqan2::External >, 4194304u, 2u> > > OK 96: StringTestCommon_Value type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_Value type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_Value type parameter seqan2::String >, 4194304u, 2u> > > OK 96: StringTestCommon_Value type parameter seqan2::String, seqan2::MMap >, unsigned long> > > OK 96: StringTestCommon_Value type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_Value type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_Value type parameter seqan2::String >, unsigned long> > > OK 96: StringTestCommon_Value type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_Value type parameter seqan2::String, seqan2::Packed > > OK 96: StringTestCommon_Value type parameter seqan2::String > > OK 96: StringTestCommon_Value type parameter seqan2::String > > OK 96: StringTestCommon_Value type parameter seqan2::String > > OK 96: StringTestCommon_Value type parameter seqan2::String, seqan2::Array<100ul> > OK 96: StringTestCommon_Value type parameter seqan2::String > OK 96: StringTestCommon_Value type parameter seqan2::String > OK 96: StringTestCommon_Value type parameter seqan2::String > OK 96: StringTestCommon_Value type parameter seqan2::String, seqan2::Block<4096ul> > OK 96: StringTestCommon_Value type parameter seqan2::String > OK 96: StringTestCommon_Value type parameter seqan2::String > OK 96: StringTestCommon_Value type parameter seqan2::String > OK 96: StringTestCommon_Value type parameter seqan2::String, seqan2::Alloc > OK 96: StringTestCommon_Value type parameter seqan2::String > OK 96: StringTestCommon_Value type parameter seqan2::String > OK 96: StringTestCommon_Value type parameter seqan2::String > OK 96: StringTestCommon_Value type parameter std::__cxx11::basic_string, std::allocator > OK 96: StringTestCommon_Value type parameter std::vector, std::allocator > > OK 96: StringTestCommon_Value type parameter std::vector > OK 96: StringTestCommon_Value type parameter std::vector > OK 96: StringTestCommon_Value type parameter std::vector > OK 96: StringTestCommon_Value type parameter std::deque, std::allocator > > OK 96: StringTestCommon_Value type parameter std::deque > OK 96: StringTestCommon_Value type parameter std::deque > OK 96: StringTestCommon_Value type parameter std::deque > OK 96: StringTestCommon_Value type parameter std::forward_list, std::allocator > > OK 96: StringTestCommon_Value type parameter std::forward_list > OK 96: StringTestCommon_Value type parameter std::forward_list > OK 96: StringTestCommon_Value type parameter std::forward_list > OK 96: StringTestCommon_Value type parameter std::__cxx11::list, std::allocator > > OK 96: StringTestCommon_Value type parameter std::__cxx11::list > OK 96: StringTestCommon_Value type parameter std::__cxx11::list > OK 96: StringTestCommon_Value type parameter std::__cxx11::list > OK 96: ************************************** 96: Total Tests: 1470 96: Skipped: 42 96: Errors: 0 96: ************************************** 99/411 Test #96: test_test_sequence_v2 ............................................................. Passed 0.19 sec test 107 Start 107: test_ucsc_io 107: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_ucsc_io 107: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/ucsc_io 107: Test timeout computed to be: 10000000 107: TEST SUITE test_ucsc_io 107: SEQAN_ENABLE_DEBUG == 1 107: SEQAN_ENABLE_TESTING == 1 107: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 107: SEQAN_ASYNC_IO == 1 107: test_ucsc_io_read_record_ucsc_known_genes OK 107: test_ucsc_io_read_record_ucsc_known_isoforms OK 107: test_ucsc_io_write_record_ucsc_known_genes OK 107: test_ucsc_io_write_record_ucsc_known_isoforms OK 107: test_ucsc_io_ucsc_file_in_read_record_ucsc_known_genes OK 107: test_ucsc_io_ucsc_file_in_read_record_ucsc_known_isoforms OK 107: test_ucsc_io_ucsc_file_out_write_record_ucsc_known_genes OK 107: test_ucsc_io_ucsc_file_out_write_record_ucsc_known_isoforms OK 107: ************************************** 107: Total Tests: 8 107: Skipped: 0 107: Errors: 0 107: ************************************** 100/411 Test #107: test_ucsc_io ...................................................................... Passed 0.02 sec test 108 Start 108: test_test_vcf_io 108: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_vcf_io 108: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/tests/vcf_io 108: Test timeout computed to be: 10000000 108: TEST SUITE test_vcf_io 108: SEQAN_ENABLE_DEBUG == 1 108: SEQAN_ENABLE_TESTING == 1 108: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 108: SEQAN_ASYNC_IO == 1 108: test_vcf_io_read_vcf_header OK 108: test_vcf_io_read_vcf_record OK 108: test_vcf_io_vcf_file_read_record OK 108: test_vcf_io_access_const_io_context OK 108: test_vcf_io_write_vcf_header OK 108: test_vcf_io_write_vcf_record OK 108: test_vcf_io_vcf_file_write_record OK 108: test_vcf_io_isOpen_fileIn OK 108: test_vcf_io_isOpen_fileOut OK 108: ************************************** 108: Total Tests: 9 108: Skipped: 0 108: Errors: 0 108: ************************************** 101/411 Test #108: test_test_vcf_io .................................................................. Passed 0.01 sec test 109 Start 109: test_demo_dox_align_align 109: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_align_align" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/align/align.cpp.stdout" 109: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 109: Test timeout computed to be: 10000000 102: test_store_io_sam2 OK 106: test_translation_stringset_multiframe_parallel OK 103: FileStreamTest_ReadLarge type parameter seqan2::MMap >, unsigned long> > OK 106: test_translation_stringset_multiframe_concatdirect_parallel OK 106: ************************************** 106: Total Tests: 10 106: Skipped: 0 106: Errors: 0 106: ************************************** 102/411 Test #106: test_translation .................................................................. Passed 0.16 sec 102: test_store_io_split_sam OK test 110 Start 110: test_demo_dox_align_compute_alignment_stats 110: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_align_compute_alignment_stats" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/align/compute_alignment_stats.cpp.stdout" 110: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 110: Test timeout computed to be: 10000000 102: test_store_io_read_bam OK 102: ************************************** 102: Total Tests: 14 102: Skipped: 0 102: Errors: 0 102: ************************************** 103/411 Test #102: test_test_store ................................................................... Passed 0.28 sec test 111 Start 111: test_demo_dox_align_gaps_example 111: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_align_gaps_example" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/align/gaps_example.cpp.stdout" 111: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 111: Test timeout computed to be: 10000000 103: FileStreamTest_WriteLarge type parameter seqan2::Async OK 109: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_align_align. 110: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_align_compute_alignment_stats. 111: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_align_gaps_example. 110: Return code was 0. 110: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/align/compute_alignment_stats.cpp.stdout", "None". 110: Standard output was as expected. 110: Standard error was as expected. 111: Return code was 0. 111: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/align/gaps_example.cpp.stdout", "None". 111: Standard output was as expected. 111: Standard error was as expected. 109: Return code was 0. 109: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/align/align.cpp.stdout", "None". 109: Standard output was as expected. 109: Standard error was as expected. 104/411 Test #111: test_demo_dox_align_gaps_example .................................................. Passed 0.07 sec test 112 Start 112: test_demo_dox_align_global_alignment_banded 112: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_align_global_alignment_banded" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/align/global_alignment_banded.cpp.stdout" 112: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 112: Test timeout computed to be: 10000000 105/411 Test #109: test_demo_dox_align_align ......................................................... Passed 0.19 sec test 113 Start 113: test_demo_dox_align_global_alignment_unbanded 113: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_align_global_alignment_unbanded" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/align/global_alignment_unbanded.cpp.stdout" 113: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 113: Test timeout computed to be: 10000000 73: stop reader #2 100000 73: throughput: 347889 values/s 73: cap: 30 73: test_parallel_queue_mpsc_fixedsize OK 73: test_parallel_thread_pool_construct OK 73: test_parallel_thread_pool_spawn OK 103: FileStreamTest_WriteLarge type parameter seqan2::MMap >, unsigned long> > OK 106/411 Test #110: test_demo_dox_align_compute_alignment_stats ....................................... Passed 0.14 sec test 114 Start 114: test_demo_dox_align_global_alignment_unbanded_execution_policy 114: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_align_global_alignment_unbanded_execution_policy" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/align/global_alignment_unbanded_execution_policy.cpp.stdout" 114: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 114: Test timeout computed to be: 10000000 103: FileStreamTest_SeekLarge type parameter seqan2::Async OK 114: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_align_global_alignment_unbanded_execution_policy. 112: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_align_global_alignment_banded. 114: Return code was 0. 114: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/align/global_alignment_unbanded_execution_policy.cpp.stdout", "None". 114: Standard output was as expected. 114: Standard error was as expected. 113: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_align_global_alignment_unbanded. 112: Return code was 0. 112: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/align/global_alignment_banded.cpp.stdout", "None". 112: Standard output was as expected. 112: Standard error was as expected. 113: Return code was 0. 113: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/align/global_alignment_unbanded.cpp.stdout", "None". 113: Standard output was as expected. 113: Standard error was as expected. 107/411 Test #112: test_demo_dox_align_global_alignment_banded ....................................... Passed 0.10 sec test 115 Start 115: test_demo_dox_align_global_alignment_unbanded_score_execution_policy_parallel 115: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_align_global_alignment_unbanded_score_execution_policy_parallel" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/align/global_alignment_unbanded_score_execution_policy_parallel.cpp.stdout" 115: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 115: Test timeout computed to be: 10000000 108/411 Test #114: test_demo_dox_align_global_alignment_unbanded_execution_policy .................... Passed 0.08 sec test 116 Start 116: test_demo_dox_align_global_alignment_unbanded_score_execution_policy_wavefront 116: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_align_global_alignment_unbanded_score_execution_policy_wavefront" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/align/global_alignment_unbanded_score_execution_policy_wavefront.cpp.stdout" 116: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 116: Test timeout computed to be: 10000000 103: FileStreamTest_SeekLarge type parameter seqan2::MMap >, unsigned long> > OK 103: VStreamTest_Construct type parameter seqan2::Tag OK 103: VStreamTest_Construct type parameter seqan2::Tag OK 103: VStreamTest_Construct type parameter seqan2::Tag OK 103: VStreamTest_Construct type parameter seqan2::Tag OK 109/411 Test #113: test_demo_dox_align_global_alignment_unbanded ..................................... Passed 0.10 sec test 117 Start 117: test_demo_dox_align_integrate_align 117: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_align_integrate_align" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/align/integrate_align.cpp.stdout" 117: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 117: Test timeout computed to be: 10000000 103: VStreamTest_OpenClose type parameter seqan2::Tag OK 103: VStreamTest_OpenClose type parameter seqan2::Tag OK 103: VStreamTest_OpenClose type parameter seqan2::Tag OK 103: VStreamTest_OpenClose type parameter seqan2::Tag OK 103: VStreamTest_Decompression type parameter seqan2::Tag OK 103: VStreamTest_Decompression type parameter seqan2::Tag OK 103: VStreamTest_Decompression type parameter seqan2::Tag OK 103: VStreamTest_Decompression type parameter seqan2::Tag OK 115: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_align_global_alignment_unbanded_score_execution_policy_parallel. 117: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_align_integrate_align. 115: Return code was 0. 115: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/align/global_alignment_unbanded_score_execution_policy_parallel.cpp.stdout", "None". 115: Standard output was as expected. 115: Standard error was as expected. 117: Return code was 0. 117: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/align/integrate_align.cpp.stdout", "None". 117: Standard output was as expected. 117: Standard error was as expected. 116: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_align_global_alignment_unbanded_score_execution_policy_wavefront. 103: VStreamTest_Compression type parameter seqan2::Tag OK 110/411 Test #115: test_demo_dox_align_global_alignment_unbanded_score_execution_policy_parallel ..... Passed 0.07 sec test 118 Start 118: test_demo_dox_align_local_alignment_unbanded_execution_policy 118: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_align_local_alignment_unbanded_execution_policy" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/align/local_alignment_unbanded_execution_policy.cpp.stdout" 118: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 118: Test timeout computed to be: 10000000 111/411 Test #117: test_demo_dox_align_integrate_align ............................................... Passed 0.07 sec test 119 Start 119: test_demo_dox_align_local_alignment_unbanded_score_execution_policy_parallel 119: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_align_local_alignment_unbanded_score_execution_policy_parallel" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/align/local_alignment_unbanded_score_execution_policy_parallel.cpp.stdout" 119: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 119: Test timeout computed to be: 10000000 103: VStreamTest_Compression type parameter seqan2::Tag OK 118: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_align_local_alignment_unbanded_execution_policy. 119: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_align_local_alignment_unbanded_score_execution_policy_parallel. 118: Return code was 0. 118: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/align/local_alignment_unbanded_execution_policy.cpp.stdout", "None". 118: Standard output was as expected. 118: Standard error was as expected. 112/411 Test #118: test_demo_dox_align_local_alignment_unbanded_execution_policy ..................... Passed 0.13 sec 119: Return code was 0. 119: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/align/local_alignment_unbanded_score_execution_policy_parallel.cpp.stdout", "None". test 120 Start 120: test_demo_dox_align_local_alignment_unbanded_score_execution_policy_wavefront 120: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_align_local_alignment_unbanded_score_execution_policy_wavefront" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/align/local_alignment_unbanded_score_execution_policy_wavefront.cpp.stdout" 120: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 120: Test timeout computed to be: 10000000 119: Standard output was as expected. 119: Standard error was as expected. 113/411 Test #119: test_demo_dox_align_local_alignment_unbanded_score_execution_policy_parallel ...... Passed 0.15 sec test 121 Start 121: test_demo_dox_align_extend_extend_alignment 121: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_align_extend_extend_alignment" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/align_extend/extend_alignment.cpp.stdout" 121: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 121: Test timeout computed to be: 10000000 120: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_align_local_alignment_unbanded_score_execution_policy_wavefront. 121: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_align_extend_extend_alignment. 121: Return code was 0. 121: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/align_extend/extend_alignment.cpp.stdout", "None". 121: Standard output was as expected. 121: Standard error was as expected. 114/411 Test #121: test_demo_dox_align_extend_extend_alignment ....................................... Passed 0.11 sec test 122 Start 122: test_demo_dox_align_split_split_alignment 122: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_align_split_split_alignment" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/align_split/split_alignment.cpp.stdout" 122: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 122: Test timeout computed to be: 10000000 122: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_align_split_split_alignment. 122: Return code was 0. 122: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/align_split/split_alignment.cpp.stdout", "None". 122: Standard output was as expected. 122: Standard error was as expected. 115/411 Test #122: test_demo_dox_align_split_split_alignment ......................................... Passed 0.06 sec test 123 Start 123: test_demo_dox_bam_io_bam_tags_dict 123: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_bam_io_bam_tags_dict" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/bam_io/bam_tags_dict.cpp.stdout" 123: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 123: Test timeout computed to be: 10000000 123: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_bam_io_bam_tags_dict. 123: Return code was 0. 123: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/bam_io/bam_tags_dict.cpp.stdout", "None". 103: VStreamTest_Compression type parameter seqan2::Tag OK 123: Standard output was as expected. 123: Standard error was as expected. 103: VStreamTest_Compression type parameter seqan2::Tag OK 116/411 Test #123: test_demo_dox_bam_io_bam_tags_dict ................................................ Passed 0.07 sec test 124 Start 124: test_demo_dox_basic_zip_iterator 124: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_basic_zip_iterator" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/basic/zip_iterator.cpp.stdout" 124: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 124: Test timeout computed to be: 10000000 103: VStreamTest_AutoDetection type parameter seqan2::Tag OK 103: VStreamTest_AutoDetection type parameter seqan2::Tag OK 103: VStreamTest_AutoDetection type parameter seqan2::Tag OK 103: VStreamTest_AutoDetection type parameter seqan2::Tag OK 103: WriteTest_StdString type parameter seqan2::String > OK 103: InputStreamTest_Open type parameter std::basic_fstream > OK 103: InputStreamTest_Open type parameter std::basic_ifstream > OK 124: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_basic_zip_iterator. 124: Return code was 0. 124: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/basic/zip_iterator.cpp.stdout", "None". 124: Standard output was as expected. 124: Standard error was as expected. 117/411 Test #124: test_demo_dox_basic_zip_iterator .................................................. Passed 0.07 sec test 125 Start 125: test_demo_dox_consensus_consensus_alignment 125: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_consensus_consensus_alignment" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/consensus/consensus_alignment.cpp.stdout" 125: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 125: Test timeout computed to be: 10000000 125: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_consensus_consensus_alignment. 125: Return code was 0. 125: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/consensus/consensus_alignment.cpp.stdout", "None". 125: Standard output was as expected. 125: Standard error was as expected. 118/411 Test #125: test_demo_dox_consensus_consensus_alignment ....................................... Passed 0.07 sec test 126 Start 126: test_demo_dox_find_finder_index 126: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_find_finder_index" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/find/finder_index.cpp.stdout" 126: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 126: Test timeout computed to be: 10000000 126: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_find_finder_index. 126: Return code was 0. 126: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/find/finder_index.cpp.stdout", "None". 126: Standard output was as expected. 126: Standard error was as expected. 119/411 Test #126: test_demo_dox_find_finder_index ................................................... Passed 0.06 sec test 127 Start 127: test_demo_dox_find_finder_online 127: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_find_finder_online" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/find/finder_online.cpp.stdout" 127: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 127: Test timeout computed to be: 10000000 103: InputStreamTest_Get type parameter std::basic_fstream > OK 127: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_find_finder_online. 127: Return code was 0. 127: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/find/finder_online.cpp.stdout", "None". 127: Standard output was as expected. 127: Standard error was as expected. 120/411 Test #127: test_demo_dox_find_finder_online .................................................. Passed 0.07 sec test 128 Start 128: test_demo_dox_graph_algorithms_all_pairs_shortest_path 128: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_graph_algorithms_all_pairs_shortest_path" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/graph_algorithms/all_pairs_shortest_path.cpp.stdout" 128: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 128: Test timeout computed to be: 10000000 128: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_graph_algorithms_all_pairs_shortest_path. 53: BidirectionalFMIndexTest_SearchInStringSet type parameter seqan2::Index, seqan2::Alloc >, seqan2::BidirectionalIndex > > > OK 128: Return code was 0. 128: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/graph_algorithms/all_pairs_shortest_path.cpp.stdout", "None". 128: Standard output was as expected. 128: Standard error was as expected. 121/411 Test #128: test_demo_dox_graph_algorithms_all_pairs_shortest_path ............................ Passed 0.10 sec test 129 Start 129: test_demo_dox_graph_algorithms_bellman_ford_algorithm 129: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_graph_algorithms_bellman_ford_algorithm" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/graph_algorithms/bellman_ford_algorithm.cpp.stdout" 129: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 129: Test timeout computed to be: 10000000 129: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_graph_algorithms_bellman_ford_algorithm. 129: Return code was 0. 129: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/graph_algorithms/bellman_ford_algorithm.cpp.stdout", "None". 129: Standard output was as expected. 129: Standard error was as expected. 122/411 Test #129: test_demo_dox_graph_algorithms_bellman_ford_algorithm ............................. Passed 0.06 sec test 130 Start 130: test_demo_dox_graph_algorithms_breadth_first_search 130: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_graph_algorithms_breadth_first_search" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/graph_algorithms/breadth_first_search.cpp.stdout" 130: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 130: Test timeout computed to be: 10000000 103: InputStreamTest_Get type parameter std::basic_ifstream > OK 103: InputStreamTest_Eof type parameter std::basic_fstream > OK 103: InputStreamTest_Eof type parameter std::basic_ifstream > OK 103: OutputStreamTest_Open type parameter std::basic_fstream > OK 73: test_parallel_thread_pool_join OK 103: OutputStreamTest_Open type parameter std::basic_ofstream > OK 103: OutputStreamTest_Put type parameter std::basic_fstream > OK 103: OutputStreamTest_Put type parameter std::basic_ofstream > OK 103: InputStreamTest_Tell type parameter std::basic_fstream > OK 103: InputStreamTest_Tell type parameter std::basic_ifstream > OK 103: OutputStreamTest_Tell type parameter std::basic_fstream > OK 103: OutputStreamTest_Tell type parameter std::basic_ofstream > OK 130: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_graph_algorithms_breadth_first_search. 103: ************************************** 103: Total Tests: 213 103: Skipped: 0 103: Errors: 0 103: ************************************** 130: Return code was 0. 130: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/graph_algorithms/breadth_first_search.cpp.stdout", "None". 130: Standard output was as expected. 130: Standard error was as expected. 123/411 Test #103: test_test_stream .................................................................. Passed 1.40 sec test 131 Start 131: test_demo_dox_graph_algorithms_dag_shortest_path 131: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_graph_algorithms_dag_shortest_path" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/graph_algorithms/dag_shortest_path.cpp.stdout" 131: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 131: Test timeout computed to be: 10000000 124/411 Test #130: test_demo_dox_graph_algorithms_breadth_first_search ............................... Passed 0.08 sec test 132 Start 132: test_demo_dox_graph_algorithms_depth_first_search 132: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_graph_algorithms_depth_first_search" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/graph_algorithms/depth_first_search.cpp.stdout" 132: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 132: Test timeout computed to be: 10000000 131: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_graph_algorithms_dag_shortest_path. 131: Return code was 0. 131: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/graph_algorithms/dag_shortest_path.cpp.stdout", "None". 131: Standard output was as expected. 131: Standard error was as expected. 125/411 Test #131: test_demo_dox_graph_algorithms_dag_shortest_path .................................. Passed 0.09 sec test 133 Start 133: test_demo_dox_graph_algorithms_dijkstra 133: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_graph_algorithms_dijkstra" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/graph_algorithms/dijkstra.cpp.stdout" 133: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 133: Test timeout computed to be: 10000000 132: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_graph_algorithms_depth_first_search. 132: Return code was 0. 132: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/graph_algorithms/depth_first_search.cpp.stdout", "None". 132: Standard output was as expected. 132: Standard error was as expected. 126/411 Test #132: test_demo_dox_graph_algorithms_depth_first_search ................................. Passed 0.12 sec test 134 Start 134: test_demo_dox_graph_algorithms_floyd_warshall_algorithm 134: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_graph_algorithms_floyd_warshall_algorithm" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/graph_algorithms/floyd_warshall_algorithm.cpp.stdout" 134: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 134: Test timeout computed to be: 10000000 133: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_graph_algorithms_dijkstra. 133: Return code was 0. 133: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/graph_algorithms/dijkstra.cpp.stdout", "None". 133: Standard output was as expected. 133: Standard error was as expected. 127/411 Test #133: test_demo_dox_graph_algorithms_dijkstra ........................................... Passed 0.07 sec test 135 Start 135: test_demo_dox_graph_algorithms_ford_fulkerson_algorithm 135: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_graph_algorithms_ford_fulkerson_algorithm" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/graph_algorithms/ford_fulkerson_algorithm.cpp.stdout" 135: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 135: Test timeout computed to be: 10000000 134: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_graph_algorithms_floyd_warshall_algorithm. 134: Return code was 0. 134: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/graph_algorithms/floyd_warshall_algorithm.cpp.stdout", "None". 134: Standard output was as expected. 134: Standard error was as expected. 135: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_graph_algorithms_ford_fulkerson_algorithm. 128/411 Test #134: test_demo_dox_graph_algorithms_floyd_warshall_algorithm ........................... Passed 0.09 sec test 136 Start 136: test_demo_dox_graph_algorithms_kruskals_algorithm 136: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_graph_algorithms_kruskals_algorithm" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/graph_algorithms/kruskals_algorithm.cpp.stdout" 136: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 136: Test timeout computed to be: 10000000 135: Return code was 0. 135: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/graph_algorithms/ford_fulkerson_algorithm.cpp.stdout", "None". 135: Standard output was as expected. 135: Standard error was as expected. 129/411 Test #135: test_demo_dox_graph_algorithms_ford_fulkerson_algorithm ........................... Passed 0.06 sec test 137 Start 137: test_demo_dox_graph_algorithms_prims_algorithm 137: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_graph_algorithms_prims_algorithm" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/graph_algorithms/prims_algorithm.cpp.stdout" 137: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 137: Test timeout computed to be: 10000000 136: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_graph_algorithms_kruskals_algorithm. 136: Return code was 0. 136: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/graph_algorithms/kruskals_algorithm.cpp.stdout", "None". 136: Standard output was as expected. 136: Standard error was as expected. 137: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_graph_algorithms_prims_algorithm. 137: Return code was 0. 137: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/graph_algorithms/prims_algorithm.cpp.stdout", "None". 137: Standard output was as expected. 137: Standard error was as expected. 130/411 Test #136: test_demo_dox_graph_algorithms_kruskals_algorithm ................................. Passed 0.09 sec test 138 Start 138: test_demo_dox_graph_algorithms_strongly_connected_components 138: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_graph_algorithms_strongly_connected_components" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/graph_algorithms/strongly_connected_components.cpp.stdout" 138: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 138: Test timeout computed to be: 10000000 131/411 Test #137: test_demo_dox_graph_algorithms_prims_algorithm .................................... Passed 0.08 sec test 139 Start 139: test_demo_dox_graph_algorithms_topological_sort 139: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_graph_algorithms_topological_sort" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/graph_algorithms/topological_sort.cpp.stdout" 139: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 139: Test timeout computed to be: 10000000 138: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_graph_algorithms_strongly_connected_components. 139: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_graph_algorithms_topological_sort. 138: Return code was 0. 138: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/graph_algorithms/strongly_connected_components.cpp.stdout", "None". 138: Standard output was as expected. 138: Standard error was as expected. 132/411 Test #138: test_demo_dox_graph_algorithms_strongly_connected_components ...................... Passed 0.09 sec test 140 Start 140: test_demo_dox_graph_algorithms_transitive_closure 140: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_graph_algorithms_transitive_closure" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/graph_algorithms/transitive_closure.cpp.stdout" 140: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 140: Test timeout computed to be: 10000000 139: Return code was 0. 139: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/graph_algorithms/topological_sort.cpp.stdout", "None". 139: Standard output was as expected. 139: Standard error was as expected. 133/411 Test #139: test_demo_dox_graph_algorithms_topological_sort ................................... Passed 0.09 sec test 141 Start 141: test_demo_dox_graph_types_graph_algo_dijkstra 141: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_graph_types_graph_algo_dijkstra" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/graph_types/graph_algo_dijkstra.cpp.stdout" 141: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 141: Test timeout computed to be: 10000000 141: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_graph_types_graph_algo_dijkstra. 141: Return code was 0. 141: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/graph_types/graph_algo_dijkstra.cpp.stdout", "None". 141: Standard output was as expected. 141: Standard error was as expected. 134/411 Test #141: test_demo_dox_graph_types_graph_algo_dijkstra ..................................... Passed 0.05 sec test 142 Start 142: test_demo_dox_index_begin_atEnd_representative 142: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_index_begin_atEnd_representative" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/index/begin_atEnd_representative.cpp.stdout" 142: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 142: Test timeout computed to be: 10000000 140: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_graph_algorithms_transitive_closure. 140: Return code was 0. 140: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/graph_algorithms/transitive_closure.cpp.stdout", "None". 140: Standard output was as expected. 140: Standard error was as expected. 142: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_index_begin_atEnd_representative. 142: Return code was 0. 142: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/index/begin_atEnd_representative.cpp.stdout", "None". 142: Standard output was as expected. 142: Standard error was as expected. 135/411 Test #140: test_demo_dox_graph_algorithms_transitive_closure ................................. Passed 0.10 sec test 143 Start 143: test_demo_dox_index_counting 143: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_index_counting" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/index/counting.cpp.stdout" 143: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 143: Test timeout computed to be: 10000000 136/411 Test #142: test_demo_dox_index_begin_atEnd_representative .................................... Passed 0.06 sec test 144 Start 144: test_demo_dox_index_finder 144: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_index_finder" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/index/finder.cpp.stdout" 144: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 144: Test timeout computed to be: 10000000 67: test_journaled_string_tree_find_horspool OK 143: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_index_counting. 143: Return code was 0. 143: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/index/counting.cpp.stdout", "None". 143: Standard output was as expected. 143: Standard error was as expected. 144: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_index_finder. 144: Return code was 0. 144: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/index/finder.cpp.stdout", "None". 144: Standard output was as expected. 144: Standard error was as expected. 137/411 Test #143: test_demo_dox_index_counting ...................................................... Passed 0.10 sec test 145 Start 145: test_demo_dox_index_getOccurrences_getFrequency_range_getFibre 145: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_index_getOccurrences_getFrequency_range_getFibre" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/index/getOccurrences_getFrequency_range_getFibre.cpp.stdout" 145: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 145: Test timeout computed to be: 10000000 138/411 Test #144: test_demo_dox_index_finder ........................................................ Passed 0.09 sec test 146 Start 146: test_demo_dox_index_iterator 146: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_index_iterator" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/index/iterator.cpp.stdout" 146: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 146: Test timeout computed to be: 10000000 145: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_index_getOccurrences_getFrequency_range_getFibre. 146: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_index_iterator. 146: Return code was 0. 146: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/index/iterator.cpp.stdout", "None". 146: Standard output was as expected. 146: Standard error was as expected. 145: Return code was 0. 145: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/index/getOccurrences_getFrequency_range_getFibre.cpp.stdout", "None". 145: Standard output was as expected. 145: Standard error was as expected. 139/411 Test #145: test_demo_dox_index_getOccurrences_getFrequency_range_getFibre .................... Passed 0.10 sec test 147 Start 147: test_demo_dox_index_iterator_short 147: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_index_iterator_short" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/index/iterator_short.cpp.stdout" 147: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 147: Test timeout computed to be: 10000000 140/411 Test #146: test_demo_dox_index_iterator ...................................................... Passed 0.09 sec test 148 Start 148: test_demo_dox_index_length_countSequences 148: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_index_length_countSequences" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/index/length_countSequences.cpp.stdout" 148: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 148: Test timeout computed to be: 10000000 147: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_index_iterator_short. 148: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_index_length_countSequences. 147: Return code was 0. 147: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/index/iterator_short.cpp.stdout", "None". 147: Standard output was as expected. 147: Standard error was as expected. 141/411 Test #147: test_demo_dox_index_iterator_short ................................................ Passed 0.08 sec test 149 Start 149: test_demo_dox_index_mummy 149: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_index_mummy" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/index/mummy.cpp.stdout" 149: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 149: Test timeout computed to be: 10000000 148: Return code was 0. 148: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/index/length_countSequences.cpp.stdout", "None". 148: Standard output was as expected. 148: Standard error was as expected. 142/411 Test #148: test_demo_dox_index_length_countSequences ......................................... Passed 0.10 sec test 150 Start 150: test_demo_dox_index_open_save 150: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_index_open_save" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/index/open_save.cpp.stdout" 150: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 150: Test timeout computed to be: 10000000 149: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_index_mummy. 149: Return code was 0. 149: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/index/mummy.cpp.stdout", "None". 149: Standard output was as expected. 149: Standard error was as expected. 143/411 Test #149: test_demo_dox_index_mummy ......................................................... Passed 0.08 sec test 151 Start 151: test_demo_dox_index_sufarray 151: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_index_sufarray" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/index/sufarray.cpp.stdout" 151: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 151: Test timeout computed to be: 10000000 150: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_index_open_save. 150: Return code was 0. 150: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/index/open_save.cpp.stdout", "None". 150: Standard output was as expected. 150: Standard error was as expected. 144/411 Test #150: test_demo_dox_index_open_save ..................................................... Passed 0.09 sec test 152 Start 152: test_demo_dox_index_textAt_indexText_saAt_indexRequire 152: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_index_textAt_indexText_saAt_indexRequire" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/index/textAt_indexText_saAt_indexRequire.cpp.stdout" 152: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 152: Test timeout computed to be: 10000000 151: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_index_sufarray. 151: Return code was 0. 151: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/index/sufarray.cpp.stdout", "None". 151: Standard output was as expected. 151: Standard error was as expected. 145/411 Test #151: test_demo_dox_index_sufarray ...................................................... Passed 0.10 sec test 153 Start 153: test_demo_dox_misc_enumerate_strings 153: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_misc_enumerate_strings" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/misc/enumerate_strings.cpp.stdout" 153: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 153: Test timeout computed to be: 10000000 152: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_index_textAt_indexText_saAt_indexRequire. 152: Return code was 0. 152: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/index/textAt_indexText_saAt_indexRequire.cpp.stdout", "None". 152: Standard output was as expected. 152: Standard error was as expected. 146/411 Test #152: test_demo_dox_index_textAt_indexText_saAt_indexRequire ............................ Passed 0.11 sec test 154 Start 154: test_demo_dox_misc_name_store_cache 154: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_misc_name_store_cache" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/misc/name_store_cache.cpp.stdout" 154: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 154: Test timeout computed to be: 10000000 153: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_misc_enumerate_strings. 153: Return code was 0. 153: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/misc/enumerate_strings.cpp.stdout", "None". 153: Standard output was as expected. 153: Standard error was as expected. 147/411 Test #153: test_demo_dox_misc_enumerate_strings .............................................. Passed 0.11 sec test 155 Start 155: test_demo_dox_modifier_cyclic_shape 155: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_modifier_cyclic_shape" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/modifier/cyclic_shape.cpp.stdout" 155: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 155: Test timeout computed to be: 10000000 154: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_misc_name_store_cache. 154: Return code was 0. 154: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/misc/name_store_cache.cpp.stdout", "None". 154: Standard output was as expected. 154: Standard error was as expected. 148/411 Test #154: test_demo_dox_misc_name_store_cache ............................................... Passed 0.12 sec test 156 Start 156: test_demo_dox_modifier_modified_string 156: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_modifier_modified_string" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/modifier/modified_string.cpp.stdout" 156: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 156: Test timeout computed to be: 10000000 155: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_modifier_cyclic_shape. 155: Return code was 0. 155: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/modifier/cyclic_shape.cpp.stdout", "None". 155: Standard output was as expected. 155: Standard error was as expected. 149/411 Test #155: test_demo_dox_modifier_cyclic_shape ............................................... Passed 0.06 sec test 157 Start 157: test_demo_dox_modifier_modified_string_mod_view 157: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_modifier_modified_string_mod_view" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/modifier/modified_string_mod_view.cpp.stdout" 157: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 157: Test timeout computed to be: 10000000 53: BidirectionalFMIndexTest_SearchInStringSet type parameter seqan2::Index, seqan2::Alloc >, seqan2::BidirectionalIndex > > > OK 157: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_modifier_modified_string_mod_view. 157: Return code was 0. 157: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/modifier/modified_string_mod_view.cpp.stdout", "None". 157: Standard output was as expected. 157: Standard error was as expected. 150/411 Test #157: test_demo_dox_modifier_modified_string_mod_view ................................... Passed 0.05 sec 156: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_modifier_modified_string. test 158 Start 158: test_demo_dox_modifier_modified_string_nested 158: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_modifier_modified_string_nested" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/modifier/modified_string_nested.cpp.stdout" 158: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 158: Test timeout computed to be: 10000000 156: Return code was 0. 156: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/modifier/modified_string.cpp.stdout", "None". 156: Standard output was as expected. 156: Standard error was as expected. 151/411 Test #156: test_demo_dox_modifier_modified_string ............................................ Passed 0.09 sec test 159 Start 159: test_demo_dox_parallel_queue_example 159: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_parallel_queue_example" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/parallel/queue_example.cpp.stdout" 159: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 159: Test timeout computed to be: 10000000 158: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_modifier_modified_string_nested. 159: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_parallel_queue_example. 158: Return code was 0. 158: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/modifier/modified_string_nested.cpp.stdout", "None". 158: Standard output was as expected. 158: Standard error was as expected. 159: Return code was 0. 159: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/parallel/queue_example.cpp.stdout", "None". 159: Standard output was as expected. 159: Standard error was as expected. 152/411 Test #158: test_demo_dox_modifier_modified_string_nested ..................................... Passed 0.10 sec test 160 Start 160: test_demo_dox_parallel_splitter_example 160: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_parallel_splitter_example" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/parallel/splitter_example.cpp.stdout" 160: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 160: Test timeout computed to be: 10000000 153/411 Test #159: test_demo_dox_parallel_queue_example .............................................. Passed 0.10 sec test 161 Start 161: test_demo_dox_score_score 161: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_score_score" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/score/score.cpp.stdout" 161: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 161: Test timeout computed to be: 10000000 160: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_parallel_splitter_example. 160: Return code was 0. 160: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/parallel/splitter_example.cpp.stdout", "None". 160: Standard output was as expected. 160: Standard error was as expected. 154/411 Test #160: test_demo_dox_parallel_splitter_example ........................................... Passed 0.06 sec test 162 Start 162: test_demo_dox_seeds_seeds_chaining 162: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_seeds_seeds_chaining" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/seeds/seeds_chaining.cpp.stdout" 162: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 162: Test timeout computed to be: 10000000 161: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_score_score. 161: Return code was 0. 161: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/score/score.cpp.stdout", "None". 161: Standard output was as expected. 161: Standard error was as expected. 162: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_seeds_seeds_chaining. 155/411 Test #161: test_demo_dox_score_score ......................................................... Passed 0.10 sec test 163 Start 163: test_demo_dox_seeds_seeds_extension 163: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_seeds_seeds_extension" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/seeds/seeds_extension.cpp.stdout" 163: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 163: Test timeout computed to be: 10000000 162: Return code was 0. 162: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/seeds/seeds_chaining.cpp.stdout", "None". 162: Standard output was as expected. 162: Standard error was as expected. 156/411 Test #162: test_demo_dox_seeds_seeds_chaining ................................................ Passed 0.06 sec test 164 Start 164: test_demo_dox_seq_io_fai_index_example 164: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_seq_io_fai_index_example" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/seq_io/fai_index_example.cpp.stdout" 164: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 164: Test timeout computed to be: 10000000 164: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_seq_io_fai_index_example. 164: Return code was 0. 164: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/seq_io/fai_index_example.cpp.stdout", "None". 164: Standard output was as expected. 164: Standard error was as expected. 163: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_seeds_seeds_extension. 157/411 Test #164: test_demo_dox_seq_io_fai_index_example ............................................ Passed 0.06 sec test 165 Start 165: test_demo_dox_sequence_container_view_zip 165: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_sequence_container_view_zip" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/sequence/container_view_zip.cpp.stdout" 165: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 165: Test timeout computed to be: 10000000 163: Return code was 0. 163: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/seeds/seeds_extension.cpp.stdout", "None". 163: Standard output was as expected. 163: Standard error was as expected. 158/411 Test #163: test_demo_dox_seeds_seeds_extension ............................................... Passed 0.09 sec test 166 Start 166: test_demo_dox_sequence_string2 166: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_sequence_string2" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/sequence/string2.cpp.stdout" 166: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 166: Test timeout computed to be: 10000000 165: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_sequence_container_view_zip. 165: Return code was 0. 165: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/sequence/container_view_zip.cpp.stdout", "None". 165: Standard output was as expected. 165: Standard error was as expected. 166: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_sequence_string2. 159/411 Test #165: test_demo_dox_sequence_container_view_zip ......................................... Passed 0.06 sec test 167 Start 167: test_demo_dox_sequence_stringset 167: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_sequence_stringset" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/sequence/stringset.cpp.stdout" 167: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 167: Test timeout computed to be: 10000000 166: Return code was 0. 166: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/sequence/string2.cpp.stdout", "None". 166: Standard output was as expected. 166: Standard error was as expected. 160/411 Test #166: test_demo_dox_sequence_string2 .................................................... Passed 0.06 sec test 168 Start 168: test_demo_dox_stream_lexical_cast 168: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_stream_lexical_cast" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/dox/stream/lexical_cast.cpp.stdout" 168: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 168: Test timeout computed to be: 10000000 167: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_sequence_stringset. 167: Return code was 0. 167: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/sequence/stringset.cpp.stdout", "None". 167: Standard output was as expected. 167: Standard error was as expected. 161/411 Test #167: test_demo_dox_sequence_stringset .................................................. Passed 0.09 sec test 169 Start 169: test_demo_howto_align_gaps_clipping 169: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_howto_align_gaps_clipping" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/howto/align_gaps_clipping.cpp.stdout" 169: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 169: Test timeout computed to be: 10000000 168: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_dox_stream_lexical_cast. 168: Return code was 0. 168: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/stream/lexical_cast.cpp.stdout", "None". 168: Standard output was as expected. 168: Standard error was as expected. 162/411 Test #168: test_demo_dox_stream_lexical_cast ................................................. Passed 0.10 sec test 170 Start 170: test_demo_howto_custom_file_endings 170: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_howto_custom_file_endings" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/howto/custom_file_endings.cpp.stdout" 170: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 170: Test timeout computed to be: 10000000 169: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_howto_align_gaps_clipping. 169: Return code was 0. 169: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/howto/align_gaps_clipping.cpp.stdout", "None". 169: Standard output was as expected. 169: Standard error was as expected. 163/411 Test #169: test_demo_howto_align_gaps_clipping ............................................... Passed 0.09 sec test 171 Start 171: test_demo_howto_filter_similar_sequences 171: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_howto_filter_similar_sequences" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/howto/filter_similar_sequences.cpp.stdout" "--stderr-path" "/build/reproducible-path/seqan2-2.5.2/demos/howto/filter_similar_sequences.cpp.stderr" 171: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 171: Test timeout computed to be: 10000000 170: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_howto_custom_file_endings. 170: Return code was 0. 170: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/howto/custom_file_endings.cpp.stdout", "None". 170: Standard output was as expected. 170: Standard error was as expected. 164/411 Test #170: test_demo_howto_custom_file_endings ............................................... Passed 0.08 sec test 172 Start 172: test_demo_howto_scores_init_score 172: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_howto_scores_init_score" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/howto/scores/init_score.cpp.stdout" 172: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 172: Test timeout computed to be: 10000000 171: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_howto_filter_similar_sequences. 171: Return code was 0. 171: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/howto/filter_similar_sequences.cpp.stdout", "/build/reproducible-path/seqan2-2.5.2/demos/howto/filter_similar_sequences.cpp.stderr". 171: Standard output was as expected. 171: Standard error was as expected. 165/411 Test #171: test_demo_howto_filter_similar_sequences .......................................... Passed 0.07 sec test 173 Start 173: test_demo_howto_scores_load_score 173: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_howto_scores_load_score" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/howto/scores/load_score.cpp.stdout" 173: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 173: Test timeout computed to be: 10000000 172: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_howto_scores_init_score. 172: Return code was 0. 172: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/howto/scores/init_score.cpp.stdout", "None". 172: Standard output was as expected. 172: Standard error was as expected. 166/411 Test #172: test_demo_howto_scores_init_score ................................................. Passed 0.06 sec test 174 Start 174: test_demo_tutorial_a_first_example_basic_code 174: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_a_first_example_basic_code" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/a_first_example/basic_code.cpp.stdout" 174: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 174: Test timeout computed to be: 10000000 174: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_a_first_example_basic_code. 174: Return code was 0. 174: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/a_first_example/basic_code.cpp.stdout", "None". 174: Standard output was as expected. 174: Standard error was as expected. 173: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_howto_scores_load_score. 167/411 Test #174: test_demo_tutorial_a_first_example_basic_code ..................................... Passed 0.06 sec test 175 Start 175: test_demo_tutorial_a_first_example_basic_code_detailed 175: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_a_first_example_basic_code_detailed" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/a_first_example/basic_code_detailed.cpp.stdout" 175: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 175: Test timeout computed to be: 10000000 173: Return code was 0. 173: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/howto/scores/load_score.cpp.stdout", "None". 173: Standard output was as expected. 173: Standard error was as expected. 168/411 Test #173: test_demo_howto_scores_load_score ................................................. Passed 0.10 sec test 176 Start 176: test_demo_tutorial_a_first_example_code_encapsulation 176: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_a_first_example_code_encapsulation" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/a_first_example/code_encapsulation.cpp.stdout" 176: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 176: Test timeout computed to be: 10000000 175: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_a_first_example_basic_code_detailed. 175: Return code was 0. 175: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/a_first_example/basic_code_detailed.cpp.stdout", "None". 175: Standard output was as expected. 175: Standard error was as expected. 169/411 Test #175: test_demo_tutorial_a_first_example_basic_code_detailed ............................ Passed 0.07 sec test 177 Start 177: test_demo_tutorial_a_first_example_final_result 177: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_a_first_example_final_result" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/a_first_example/final_result.cpp.stdout" 177: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 177: Test timeout computed to be: 10000000 176: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_a_first_example_code_encapsulation. 73: test_parallel_thread_pool_destruct OK 73: test_parallel_enumerable_thread_local_construct OK 73: test_parallel_enumerable_thread_local_local OK 73: test_parallel_enumerable_thread_local_enumerate OK 73: test_parallel_enumerable_thread_local_combine_unary OK 73: test_parallel_enumerable_thread_local_combine_binary OK 73: ************************************** 73: Total Tests: 29 73: Skipped: 0 73: Errors: 0 73: ************************************** 170/411 Test #73: test_test_parallel ................................................................ Passed 4.33 sec test 178 Start 178: test_demo_tutorial_a_first_example_solution_1 178: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_a_first_example_solution_1" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/a_first_example/solution_1.cpp.stdout" 178: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 178: Test timeout computed to be: 10000000 176: Return code was 0. 176: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/a_first_example/code_encapsulation.cpp.stdout", "None". 176: Standard output was as expected. 176: Standard error was as expected. 177: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_a_first_example_final_result. 177: Return code was 0. 177: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/a_first_example/final_result.cpp.stdout", "None". 177: Standard output was as expected. 177: Standard error was as expected. 171/411 Test #176: test_demo_tutorial_a_first_example_code_encapsulation ............................. Passed 0.12 sec test 179 Start 179: test_demo_tutorial_a_first_example_solution_2 179: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_a_first_example_solution_2" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/a_first_example/solution_2.cpp.stdout" 179: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 179: Test timeout computed to be: 10000000 172/411 Test #177: test_demo_tutorial_a_first_example_final_result ................................... Passed 0.07 sec test 180 Start 180: test_demo_tutorial_a_first_example_solution_3 180: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_a_first_example_solution_3" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/a_first_example/solution_3.cpp.stdout" 180: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 180: Test timeout computed to be: 10000000 178: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_a_first_example_solution_1. 178: Return code was 0. 178: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/a_first_example/solution_1.cpp.stdout", "None". 178: Standard output was as expected. 178: Standard error was as expected. 180: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_a_first_example_solution_3. 173/411 Test #178: test_demo_tutorial_a_first_example_solution_1 ..................................... Passed 0.10 sec test 181 Start 181: test_demo_tutorial_a_first_example_solution_4 181: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_a_first_example_solution_4" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/a_first_example/solution_4.cpp.stdout" 181: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 181: Test timeout computed to be: 10000000 180: Return code was 0. 180: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/a_first_example/solution_3.cpp.stdout", "None". 180: Standard output was as expected. 180: Standard error was as expected. 179: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_a_first_example_solution_2. 179: Return code was 0. 179: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/a_first_example/solution_2.cpp.stdout", "None". 179: Standard output was as expected. 179: Standard error was as expected. 174/411 Test #179: test_demo_tutorial_a_first_example_solution_2 ..................................... Passed 0.11 sec test 182 Start 182: test_demo_tutorial_a_first_example_solution_5 182: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_a_first_example_solution_5" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/a_first_example/solution_5.cpp.stdout" 182: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 182: Test timeout computed to be: 10000000 175/411 Test #180: test_demo_tutorial_a_first_example_solution_3 ..................................... Passed 0.10 sec test 183 Start 183: test_demo_tutorial_a_first_example_solution_6 183: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_a_first_example_solution_6" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/a_first_example/solution_6.cpp.stdout" 183: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 183: Test timeout computed to be: 10000000 181: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_a_first_example_solution_4. 181: Return code was 0. 181: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/a_first_example/solution_4.cpp.stdout", "None". 181: Standard output was as expected. 181: Standard error was as expected. 176/411 Test #181: test_demo_tutorial_a_first_example_solution_4 ..................................... Passed 0.06 sec test 184 Start 184: test_demo_tutorial_alignment_align 184: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_alignment_align" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/alignment/align.cpp.stdout" 184: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 184: Test timeout computed to be: 10000000 182: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_a_first_example_solution_5. 182: Return code was 0. 182: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/a_first_example/solution_5.cpp.stdout", "None". 182: Standard output was as expected. 182: Standard error was as expected. 177/411 Test #182: test_demo_tutorial_a_first_example_solution_5 ..................................... Passed 0.08 sec test 185 Start 185: test_demo_tutorial_alignment_align_assignment1 185: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_alignment_align_assignment1" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/alignment/align_assignment1.cpp.stdout" 185: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 185: Test timeout computed to be: 10000000 183: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_a_first_example_solution_6. 184: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_alignment_align. 183: Return code was 0. 183: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/a_first_example/solution_6.cpp.stdout", "None". 183: Standard output was as expected. 183: Standard error was as expected. 184: Return code was 0. 184: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/alignment/align.cpp.stdout", "None". 184: Standard output was as expected. 184: Standard error was as expected. 185: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_alignment_align_assignment1. 178/411 Test #183: test_demo_tutorial_a_first_example_solution_6 ..................................... Passed 0.12 sec test 186 Start 186: test_demo_tutorial_alignment_graph 186: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_alignment_graph" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/alignment/graph.cpp.stdout" 186: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 186: Test timeout computed to be: 10000000 185: Return code was 0. 185: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/alignment/align_assignment1.cpp.stdout", "None". 185: Standard output was as expected. 185: Standard error was as expected. 179/411 Test #184: test_demo_tutorial_alignment_align ................................................ Passed 0.09 sec test 187 Start 187: test_demo_tutorial_alignment_graph_assignment1 187: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_alignment_graph_assignment1" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/alignment/graph_assignment1.cpp.stdout" 187: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 187: Test timeout computed to be: 10000000 180/411 Test #185: test_demo_tutorial_alignment_align_assignment1 .................................... Passed 0.06 sec test 188 Start 188: test_demo_tutorial_alignment_scoring_scheme_affine_dgs 188: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_alignment_scoring_scheme_affine_dgs" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/alignment/scoring_scheme_affine_dgs.cpp.stdout" 188: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 188: Test timeout computed to be: 10000000 187: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_alignment_graph_assignment1. 187: Return code was 0. 187: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/alignment/graph_assignment1.cpp.stdout", "None". 187: Standard output was as expected. 187: Standard error was as expected. 186: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_alignment_graph. 186: Return code was 0. 186: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/alignment/graph.cpp.stdout", "None". 186: Standard output was as expected. 186: Standard error was as expected. 181/411 Test #186: test_demo_tutorial_alignment_graph ................................................ Passed 0.10 sec test 189 Start 189: test_demo_tutorial_alignment_scoring_scheme_matrix 189: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_alignment_scoring_scheme_matrix" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/alignment/scoring_scheme_matrix.cpp.stdout" 189: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 189: Test timeout computed to be: 10000000 188: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_alignment_scoring_scheme_affine_dgs. 182/411 Test #187: test_demo_tutorial_alignment_graph_assignment1 .................................... Passed 0.09 sec test 190 Start 190: test_demo_tutorial_alignment_scoring_scheme_simple 190: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_alignment_scoring_scheme_simple" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/alignment/scoring_scheme_simple.cpp.stdout" 190: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 190: Test timeout computed to be: 10000000 188: Return code was 0. 188: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/alignment/scoring_scheme_affine_dgs.cpp.stdout", "None". 188: Standard output was as expected. 188: Standard error was as expected. 183/411 Test #188: test_demo_tutorial_alignment_scoring_scheme_affine_dgs ............................ Passed 0.12 sec test 191 Start 191: test_demo_tutorial_alphabets_assignment_1 191: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_alphabets_assignment_1" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/alphabets/assignment_1.cpp.stdout" 191: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 191: Test timeout computed to be: 10000000 190: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_alignment_scoring_scheme_simple. 190: Return code was 0. 190: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/alignment/scoring_scheme_simple.cpp.stdout", "None". 190: Standard output was as expected. 190: Standard error was as expected. 184/411 Test #190: test_demo_tutorial_alignment_scoring_scheme_simple ................................ Passed 0.07 sec test 192 Start 192: test_demo_tutorial_alphabets_assignment_1_solution 192: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_alphabets_assignment_1_solution" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/alphabets/assignment_1_solution.cpp.stdout" 192: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 192: Test timeout computed to be: 10000000 189: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_alignment_scoring_scheme_matrix. 189: Return code was 0. 189: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/alignment/scoring_scheme_matrix.cpp.stdout", "None". 189: Standard output was as expected. 189: Standard error was as expected. 191: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_alphabets_assignment_1. 191: Return code was 0. 185/411 Test #189: test_demo_tutorial_alignment_scoring_scheme_matrix ................................ Passed 0.10 sec test 193 Start 193: test_demo_tutorial_alphabets_example_bitsPerValue 193: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_alphabets_example_bitsPerValue" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/alphabets/example_bitsPerValue.cpp.stdout" 193: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 193: Test timeout computed to be: 10000000 191: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/alphabets/assignment_1.cpp.stdout", "None". 191: Standard output was as expected. 191: Standard error was as expected. 186/411 Test #191: test_demo_tutorial_alphabets_assignment_1 ......................................... Passed 0.09 sec test 194 Start 194: test_demo_tutorial_alphabets_example_ordValue 194: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_alphabets_example_ordValue" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/alphabets/example_ordValue.cpp.stdout" 194: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 194: Test timeout computed to be: 10000000 194: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_alphabets_example_ordValue. 194: Return code was 0. 194: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/alphabets/example_ordValue.cpp.stdout", "None". 194: Standard output was as expected. 194: Standard error was as expected. 192: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_alphabets_assignment_1_solution. 192: Return code was 0. 192: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/alphabets/assignment_1_solution.cpp.stdout", "None". 192: Standard output was as expected. 192: Standard error was as expected. 187/411 Test #194: test_demo_tutorial_alphabets_example_ordValue ..................................... Passed 0.06 sec test 195 Start 195: test_demo_tutorial_alphabets_example_size 195: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_alphabets_example_size" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/alphabets/example_size.cpp.stdout" 195: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 195: Test timeout computed to be: 10000000 193: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_alphabets_example_bitsPerValue. 188/411 Test #192: test_demo_tutorial_alphabets_assignment_1_solution ................................ Passed 0.12 sec 193: Return code was 0. 193: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/alphabets/example_bitsPerValue.cpp.stdout", "None". test 196 Start 196: test_demo_tutorial_background_and_motivation_example 196: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_background_and_motivation_example" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/background_and_motivation/example.cpp.stdout" 196: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 196: Test timeout computed to be: 10000000 193: Standard output was as expected. 193: Standard error was as expected. 189/411 Test #193: test_demo_tutorial_alphabets_example_bitsPerValue ................................. Passed 0.11 sec test 197 Start 197: test_demo_tutorial_basic_techniques_base 197: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_basic_techniques_base" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/basic_techniques/base.cpp.stdout" 197: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 197: Test timeout computed to be: 10000000 196: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_background_and_motivation_example. 196: Return code was 0. 196: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/background_and_motivation/example.cpp.stdout", "None". 196: Standard output was as expected. 196: Standard error was as expected. 190/411 Test #196: test_demo_tutorial_background_and_motivation_example .............................. Passed 0.06 sec test 198 Start 198: test_demo_tutorial_basics_allocator 198: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_basics_allocator" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/basics/allocator.cpp.stdout" 198: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 198: Test timeout computed to be: 10000000 197: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_basic_techniques_base. 197: Return code was 0. 197: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/basic_techniques/base.cpp.stdout", "None". 197: Standard output was as expected. 197: Standard error was as expected. 191/411 Test #197: test_demo_tutorial_basic_techniques_base .......................................... Passed 0.07 sec test 199 Start 199: test_demo_tutorial_basics_base 199: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_basics_base" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/basics/base.cpp.stdout" 199: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 199: Test timeout computed to be: 10000000 195: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_alphabets_example_size. 195: Return code was 0. 195: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/alphabets/example_size.cpp.stdout", "None". 195: Standard output was as expected. 195: Standard error was as expected. 192/411 Test #195: test_demo_tutorial_alphabets_example_size ......................................... Passed 0.13 sec test 200 Start 200: test_demo_tutorial_basics_show_alphabets 200: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_basics_show_alphabets" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/basics/show_alphabets.cpp.stdout" 200: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 200: Test timeout computed to be: 10000000 198: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_basics_allocator. 199: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_basics_base. 200: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_basics_show_alphabets. 199: Return code was 0. 199: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/basics/base.cpp.stdout", "None". 199: Standard output was as expected. 199: Standard error was as expected. 11: test_bam_io_bam_file_bam_file_seek OK 11: test_bam_io_sam_file_issue_489 OK 11: test_bam_io_bam_index_save OK 11: test_bam_io_bam_index_open OK 200: Return code was 0. 200: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/basics/show_alphabets.cpp.stdout", "None". 200: Standard output was as expected. 200: Standard error was as expected. 11: test_bam_io_bam_index_jump_to_region OK 193/411 Test #200: test_demo_tutorial_basics_show_alphabets .......................................... Passed 0.06 sec test 201 Start 201: test_demo_tutorial_basics_strings 201: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_basics_strings" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/basics/strings.cpp.stdout" 201: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 201: Test timeout computed to be: 10000000 194/411 Test #199: test_demo_tutorial_basics_base .................................................... Passed 0.10 sec test 202 Start 202: test_demo_tutorial_bed_io_base 202: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_bed_io_base" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/bed_io/base.cpp.stdout" 202: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 202: Test timeout computed to be: 10000000 11: test_bam_io_bam_index_view_records OK 11: ************************************** 11: Total Tests: 109 11: Skipped: 0 11: Errors: 0 11: ************************************** 195/411 Test #11: test_test_bam_io .................................................................. Passed 6.10 sec test 203 Start 203: test_demo_tutorial_bed_io_example1 203: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_bed_io_example1" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/bed_io/example1.cpp.stdout" 203: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 203: Test timeout computed to be: 10000000 201: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_basics_strings. 201: Return code was 0. 201: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/basics/strings.cpp.stdout", "None". 201: Standard output was as expected. 201: Standard error was as expected. 53: BidirectionalFMIndexTest_SearchInStringSet type parameter seqan2::Index >, seqan2::BidirectionalIndex > > > OK 196/411 Test #201: test_demo_tutorial_basics_strings ................................................. Passed 0.07 sec test 204 Start 204: test_demo_tutorial_bed_io_solution1 204: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_bed_io_solution1" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/bed_io/solution1.cpp.stdout" 204: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 204: Test timeout computed to be: 10000000 203: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_bed_io_example1. 202: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_bed_io_base. 203: Return code was 0. 203: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/bed_io/example1.cpp.stdout", "None". 203: Standard output was as expected. 203: Standard error was as expected. 202: Return code was 0. 202: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/bed_io/base.cpp.stdout", "None". 202: Standard output was as expected. 202: Standard error was as expected. 197/411 Test #203: test_demo_tutorial_bed_io_example1 ................................................ Passed 0.07 sec test 205 Start 205: test_demo_tutorial_bed_io_solution2 205: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_bed_io_solution2" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/bed_io/solution2.cpp.stdout" 205: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 205: Test timeout computed to be: 10000000 198/411 Test #202: test_demo_tutorial_bed_io_base .................................................... Passed 0.10 sec test 206 Start 206: test_demo_tutorial_bed_io_solution3 206: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_bed_io_solution3" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/bed_io/solution3.cpp.stdout" 206: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 206: Test timeout computed to be: 10000000 204: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_bed_io_solution1. 204: Return code was 0. 204: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/bed_io/solution1.cpp.stdout", "None". 204: Standard output was as expected. 204: Standard error was as expected. 199/411 Test #204: test_demo_tutorial_bed_io_solution1 ............................................... Passed 0.06 sec test 207 Start 207: test_demo_tutorial_blast_io_read_assignment 207: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_blast_io_read_assignment" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/blast_io/read_assignment.cpp.stdout" "--stderr-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/blast_io/read_assignment.cpp.stderr" 207: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 207: Test timeout computed to be: 10000000 205: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_bed_io_solution2. 205: Return code was 0. 205: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/bed_io/solution2.cpp.stdout", "None". 205: Standard output was as expected. 205: Standard error was as expected. 206: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_bed_io_solution3. 198: Return code was 0. 198: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/basics/allocator.cpp.stdout", "None". 200/411 Test #205: test_demo_tutorial_bed_io_solution2 ............................................... Passed 0.06 sec test 208 Start 208: test_demo_tutorial_blast_io_write_assignment 208: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_blast_io_write_assignment" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/blast_io/write_assignment.cpp.stdout" "--stderr-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/blast_io/write_assignment.cpp.stderr" 208: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 208: Test timeout computed to be: 10000000 198: Standard output was as expected. 198: Standard error was as expected. 206: Return code was 0. 206: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/bed_io/solution3.cpp.stdout", "None". 206: Standard output was as expected. 206: Standard error was as expected. 201/411 Test #198: test_demo_tutorial_basics_allocator ............................................... Passed 0.29 sec test 209 Start 209: test_demo_tutorial_consensus_alignment_with_positions 209: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_consensus_alignment_with_positions" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/consensus_alignment/with_positions.cpp.stdout" 209: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 209: Test timeout computed to be: 10000000 202/411 Test #206: test_demo_tutorial_bed_io_solution3 ............................................... Passed 0.08 sec test 210 Start 210: test_demo_tutorial_consensus_alignment_without_positions 210: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_consensus_alignment_without_positions" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/consensus_alignment/without_positions.cpp.stdout" 210: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 210: Test timeout computed to be: 10000000 207: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_blast_io_read_assignment. 208: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_blast_io_write_assignment. 207: Return code was 0. 207: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/blast_io/read_assignment.cpp.stdout", "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/blast_io/read_assignment.cpp.stderr". 207: Standard output was as expected. 207: Standard error was as expected. 208: Return code was 0. 208: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/blast_io/write_assignment.cpp.stdout", "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/blast_io/write_assignment.cpp.stderr". 208: Standard output was as expected. 208: Standard error was as expected. 203/411 Test #208: test_demo_tutorial_blast_io_write_assignment ...................................... Passed 0.08 sec test 211 Start 211: test_demo_tutorial_file_io_overview_example1 211: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_file_io_overview_example1" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/file_io_overview/example1.cpp.stdout" 211: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 211: Test timeout computed to be: 10000000 204/411 Test #207: test_demo_tutorial_blast_io_read_assignment ....................................... Passed 0.10 sec test 212 Start 212: test_demo_tutorial_file_io_overview_solution1 212: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_file_io_overview_solution1" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/file_io_overview/solution1.cpp.stdout" 212: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 212: Test timeout computed to be: 10000000 210: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_consensus_alignment_without_positions. 209: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_consensus_alignment_with_positions. 210: Return code was 0. 210: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/consensus_alignment/without_positions.cpp.stdout", "None". 210: Standard output was as expected. 210: Standard error was as expected. 209: Return code was 0. 209: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/consensus_alignment/with_positions.cpp.stdout", "None". 209: Standard output was as expected. 209: Standard error was as expected. 205/411 Test #210: test_demo_tutorial_consensus_alignment_without_positions .......................... Passed 0.08 sec test 213 Start 213: test_demo_tutorial_file_io_overview_solution2 213: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_file_io_overview_solution2" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/file_io_overview/solution2.cpp.stdout" 213: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 213: Test timeout computed to be: 10000000 206/411 Test #209: test_demo_tutorial_consensus_alignment_with_positions ............................. Passed 0.09 sec test 214 Start 214: test_demo_tutorial_file_io_overview_solution3 214: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_file_io_overview_solution3" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/file_io_overview/solution3.cpp.stdout" 214: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 214: Test timeout computed to be: 10000000 211: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_file_io_overview_example1. 212: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_file_io_overview_solution1. 214: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_file_io_overview_solution3. 213: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_file_io_overview_solution2. 211: Return code was 0. 211: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/file_io_overview/example1.cpp.stdout", "None". 211: Standard output was as expected. 211: Standard error was as expected. 207/411 Test #211: test_demo_tutorial_file_io_overview_example1 ...................................... Passed 0.10 sec test 215 Start 215: test_demo_tutorial_fragment_store_access_aligned_reads 215: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_fragment_store_access_aligned_reads" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/fragment_store/access_aligned_reads.cpp.stdout" 215: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 215: Test timeout computed to be: 10000000 212: Return code was 0. 212: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/file_io_overview/solution1.cpp.stdout", "None". 212: Standard output was as expected. 212: Standard error was as expected. 214: Return code was 0. 214: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/file_io_overview/solution3.cpp.stdout", "None". 214: Standard output was as expected. 214: Standard error was as expected. 208/411 Test #214: test_demo_tutorial_file_io_overview_solution3 ..................................... Passed 0.09 sec test 216 Start 216: test_demo_tutorial_fragment_store_access_aligned_reads2 216: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_fragment_store_access_aligned_reads2" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/fragment_store/access_aligned_reads2.cpp.stdout" 216: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 216: Test timeout computed to be: 10000000 213: Return code was 0. 213: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/file_io_overview/solution2.cpp.stdout", "None". 213: Standard output was as expected. 213: Standard error was as expected. 209/411 Test #212: test_demo_tutorial_file_io_overview_solution1 ..................................... Passed 0.13 sec test 217 Start 217: test_demo_tutorial_fragment_store_base 217: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_fragment_store_base" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/fragment_store/base.cpp.stdout" 217: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 217: Test timeout computed to be: 10000000 210/411 Test #213: test_demo_tutorial_file_io_overview_solution2 ..................................... Passed 0.12 sec test 218 Start 218: test_demo_tutorial_fragment_store_display_aligned_reads 218: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_fragment_store_display_aligned_reads" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/fragment_store/display_aligned_reads.cpp.stdout" 218: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 218: Test timeout computed to be: 10000000 215: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_fragment_store_access_aligned_reads. 218: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_fragment_store_display_aligned_reads. 217: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_fragment_store_base. 217: Return code was 0. 217: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/fragment_store/base.cpp.stdout", "None". 217: Standard output was as expected. 217: Standard error was as expected. 215: Return code was 0. 215: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/fragment_store/access_aligned_reads.cpp.stdout", "None". 215: Standard output was as expected. 215: Standard error was as expected. 216: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_fragment_store_access_aligned_reads2. 218: Return code was 0. 218: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/fragment_store/display_aligned_reads.cpp.stdout", "None". 218: Standard output was as expected. 218: Standard error was as expected. 216: Return code was 0. 216: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/fragment_store/access_aligned_reads2.cpp.stdout", "None". 216: Standard output was as expected. 216: Standard error was as expected. 211/411 Test #215: test_demo_tutorial_fragment_store_access_aligned_reads ............................ Passed 0.15 sec test 219 Start 219: test_demo_tutorial_generic_programming_example_hashing 219: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_generic_programming_example_hashing" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/generic_programming/example_hashing.cpp.stdout" 219: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 219: Test timeout computed to be: 10000000 212/411 Test #217: test_demo_tutorial_fragment_store_base ............................................ Passed 0.12 sec test 220 Start 220: test_demo_tutorial_generic_programming_template_subclassing 220: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_generic_programming_template_subclassing" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/generic_programming/template_subclassing.cpp.stdout" 220: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 220: Test timeout computed to be: 10000000 213/411 Test #218: test_demo_tutorial_fragment_store_display_aligned_reads ........................... Passed 0.10 sec test 221 Start 221: test_demo_tutorial_genome_annotations_assignment_1_hint 221: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_genome_annotations_assignment_1_hint" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/genome_annotations/assignment_1_hint.cpp.stdout" 221: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 221: Test timeout computed to be: 10000000 214/411 Test #216: test_demo_tutorial_fragment_store_access_aligned_reads2 ........................... Passed 0.15 sec test 222 Start 222: test_demo_tutorial_genome_annotations_assignment_1_solution 222: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_genome_annotations_assignment_1_solution" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/genome_annotations/assignment_1_solution.cpp.stdout" 222: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 222: Test timeout computed to be: 10000000 219: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_generic_programming_example_hashing. 219: Return code was 0. 219: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/generic_programming/example_hashing.cpp.stdout", "None". 219: Standard output was as expected. 219: Standard error was as expected. 220: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_generic_programming_template_subclassing. 215/411 Test #219: test_demo_tutorial_generic_programming_example_hashing ............................ Passed 0.06 sec test 223 Start 223: test_demo_tutorial_genome_annotations_assignment_2_solution 223: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_genome_annotations_assignment_2_solution" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/genome_annotations/assignment_2_solution.cpp.stdout" 223: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 223: Test timeout computed to be: 10000000 220: Return code was 0. 220: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/generic_programming/template_subclassing.cpp.stdout", "None". 220: Standard output was as expected. 220: Standard error was as expected. 221: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_genome_annotations_assignment_1_hint. 221: Return code was 0. 221: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/genome_annotations/assignment_1_hint.cpp.stdout", "None". 221: Standard output was as expected. 221: Standard error was as expected. 216/411 Test #220: test_demo_tutorial_generic_programming_template_subclassing ....................... Passed 0.08 sec test 224 Start 224: test_demo_tutorial_genome_annotations_assignment_3_solution 224: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_genome_annotations_assignment_3_solution" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/genome_annotations/assignment_3_solution.cpp.stdout" 224: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 224: Test timeout computed to be: 10000000 222: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_genome_annotations_assignment_1_solution. 217/411 Test #221: test_demo_tutorial_genome_annotations_assignment_1_hint ........................... Passed 0.10 sec test 225 Start 225: test_demo_tutorial_genome_annotations_assignment_4_solution 225: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_genome_annotations_assignment_4_solution" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/genome_annotations/assignment_4_solution.cpp.stdout" 225: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 225: Test timeout computed to be: 10000000 222: Return code was 0. 222: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/genome_annotations/assignment_1_solution.cpp.stdout", "None". 222: Standard output was as expected. 222: Standard error was as expected. 223: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_genome_annotations_assignment_2_solution. 223: Return code was 0. 223: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/genome_annotations/assignment_2_solution.cpp.stdout", "None". 223: Standard output was as expected. 223: Standard error was as expected. 218/411 Test #222: test_demo_tutorial_genome_annotations_assignment_1_solution ....................... Passed 0.10 sec test 226 Start 226: test_demo_tutorial_genome_annotations_base 226: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_genome_annotations_base" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/genome_annotations/base.cpp.stdout" 226: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 226: Test timeout computed to be: 10000000 219/411 Test #223: test_demo_tutorial_genome_annotations_assignment_2_solution ....................... Passed 0.08 sec test 227 Start 227: test_demo_tutorial_gff_and_gtf_io_base 227: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_gff_and_gtf_io_base" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/gff_and_gtf_io/base.cpp.stdout" 227: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 227: Test timeout computed to be: 10000000 224: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_genome_annotations_assignment_3_solution. 224: Return code was 0. 224: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/genome_annotations/assignment_3_solution.cpp.stdout", "None". 224: Standard output was as expected. 224: Standard error was as expected. 226: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_genome_annotations_base. 220/411 Test #224: test_demo_tutorial_genome_annotations_assignment_3_solution ....................... Passed 0.09 sec test 228 Start 228: test_demo_tutorial_gff_and_gtf_io_example1 228: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_gff_and_gtf_io_example1" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/gff_and_gtf_io/example1.cpp.stdout" 228: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 228: Test timeout computed to be: 10000000 225: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_genome_annotations_assignment_4_solution. 226: Return code was 0. 226: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/genome_annotations/base.cpp.stdout", "None". 226: Standard output was as expected. 226: Standard error was as expected. 225: Return code was 0. 225: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/genome_annotations/assignment_4_solution.cpp.stdout", "None". 225: Standard output was as expected. 225: Standard error was as expected. 227: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_gff_and_gtf_io_base. 221/411 Test #226: test_demo_tutorial_genome_annotations_base ........................................ Passed 0.08 sec test 229 Start 229: test_demo_tutorial_gff_and_gtf_io_example2 229: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_gff_and_gtf_io_example2" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/gff_and_gtf_io/example2.cpp.stdout" 229: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 229: Test timeout computed to be: 10000000 222/411 Test #225: test_demo_tutorial_genome_annotations_assignment_4_solution ....................... Passed 0.10 sec test 230 Start 230: test_demo_tutorial_gff_and_gtf_io_solution1 230: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_gff_and_gtf_io_solution1" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/gff_and_gtf_io/solution1.cpp.stdout" 230: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 230: Test timeout computed to be: 10000000 227: Return code was 0. 227: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/gff_and_gtf_io/base.cpp.stdout", "None". 227: Standard output was as expected. 227: Standard error was as expected. 223/411 Test #227: test_demo_tutorial_gff_and_gtf_io_base ............................................ Passed 0.10 sec test 231 Start 231: test_demo_tutorial_gff_and_gtf_io_solution2 231: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_gff_and_gtf_io_solution2" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/gff_and_gtf_io/solution2.cpp.stdout" 231: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 231: Test timeout computed to be: 10000000 228: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_gff_and_gtf_io_example1. 228: Return code was 0. 228: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/gff_and_gtf_io/example1.cpp.stdout", "None". 228: Standard output was as expected. 228: Standard error was as expected. 229: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_gff_and_gtf_io_example2. 230: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_gff_and_gtf_io_solution1. 229: Return code was 0. 229: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/gff_and_gtf_io/example2.cpp.stdout", "None". 229: Standard output was as expected. 229: Standard error was as expected. 230: Return code was 0. 230: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/gff_and_gtf_io/solution1.cpp.stdout", "None". 224/411 Test #228: test_demo_tutorial_gff_and_gtf_io_example1 ........................................ Passed 0.10 sec 230: Standard output was as expected. 230: Standard error was as expected. test 232 Start 232: test_demo_tutorial_gff_and_gtf_io_solution3 232: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_gff_and_gtf_io_solution3" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/gff_and_gtf_io/solution3.cpp.stdout" 232: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 232: Test timeout computed to be: 10000000 231: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_gff_and_gtf_io_solution2. 225/411 Test #229: test_demo_tutorial_gff_and_gtf_io_example2 ........................................ Passed 0.10 sec test 233 Start 233: test_demo_tutorial_graph_graph_algo_scc 233: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_graph_graph_algo_scc" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/graph/graph_algo_scc.cpp.stdout" 233: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 233: Test timeout computed to be: 10000000 231: Return code was 0. 231: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/gff_and_gtf_io/solution2.cpp.stdout", "None". 226/411 Test #230: test_demo_tutorial_gff_and_gtf_io_solution1 ....................................... Passed 0.10 sec 231: Standard output was as expected. 231: Standard error was as expected. test 234 Start 234: test_demo_tutorial_graph_graph_dijkstra 234: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_graph_graph_dijkstra" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/graph/graph_dijkstra.cpp.stdout" 234: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 234: Test timeout computed to be: 10000000 227/411 Test #231: test_demo_tutorial_gff_and_gtf_io_solution2 ....................................... Passed 0.08 sec test 235 Start 235: test_demo_tutorial_graph_graph_hmm 235: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_graph_graph_hmm" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/graph/graph_hmm.cpp.stdout" 235: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 235: Test timeout computed to be: 10000000 232: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_gff_and_gtf_io_solution3. 232: Return code was 0. 232: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/gff_and_gtf_io/solution3.cpp.stdout", "None". 232: Standard output was as expected. 232: Standard error was as expected. 228/411 Test #232: test_demo_tutorial_gff_and_gtf_io_solution3 ....................................... Passed 0.09 sec test 236 Start 236: test_demo_tutorial_graph_solution_1 236: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_graph_solution_1" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/graph/solution_1.cpp.stdout" 236: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 236: Test timeout computed to be: 10000000 233: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_graph_graph_algo_scc. 234: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_graph_graph_dijkstra. 233: Return code was 0. 233: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/graph/graph_algo_scc.cpp.stdout", "None". 233: Standard output was as expected. 233: Standard error was as expected. 234: Return code was 0. 234: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/graph/graph_dijkstra.cpp.stdout", "None". 234: Standard output was as expected. 234: Standard error was as expected. 229/411 Test #233: test_demo_tutorial_graph_graph_algo_scc ........................................... Passed 0.10 sec test 237 Start 237: test_demo_tutorial_index_iterators_index_assignment1 237: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_index_iterators_index_assignment1" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/index_iterators/index_assignment1.cpp.stdout" 237: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 237: Test timeout computed to be: 10000000 235: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_graph_graph_hmm. 230/411 Test #234: test_demo_tutorial_graph_graph_dijkstra ........................................... Passed 0.10 sec test 238 Start 238: test_demo_tutorial_index_iterators_index_assignment2 238: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_index_iterators_index_assignment2" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/index_iterators/index_assignment2.cpp.stdout" 238: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 238: Test timeout computed to be: 10000000 235: Return code was 0. 235: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/graph/graph_hmm.cpp.stdout", "None". 235: Standard output was as expected. 235: Standard error was as expected. 231/411 Test #235: test_demo_tutorial_graph_graph_hmm ................................................ Passed 0.10 sec test 239 Start 239: test_demo_tutorial_index_iterators_index_bidirectional_search 239: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_index_iterators_index_bidirectional_search" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/index_iterators/index_bidirectional_search.cpp.stdout" 239: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 239: Test timeout computed to be: 10000000 236: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_graph_solution_1. 236: Return code was 0. 236: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/graph/solution_1.cpp.stdout", "None". 236: Standard output was as expected. 236: Standard error was as expected. 232/411 Test #236: test_demo_tutorial_graph_solution_1 ............................................... Passed 0.09 sec test 240 Start 240: test_demo_tutorial_index_iterators_index_preorder 240: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_index_iterators_index_preorder" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/index_iterators/index_preorder.cpp.stdout" 240: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 240: Test timeout computed to be: 10000000 237: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_index_iterators_index_assignment1. 238: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_index_iterators_index_assignment2. 238: Return code was 0. 238: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/index_iterators/index_assignment2.cpp.stdout", "None". 238: Standard output was as expected. 238: Standard error was as expected. 237: Return code was 0. 237: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/index_iterators/index_assignment1.cpp.stdout", "None". 237: Standard output was as expected. 237: Standard error was as expected. 233/411 Test #238: test_demo_tutorial_index_iterators_index_assignment2 .............................. Passed 0.08 sec test 241 Start 241: test_demo_tutorial_index_iterators_index_property_maps 241: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_index_iterators_index_property_maps" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/index_iterators/index_property_maps.cpp.stdout" 241: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 241: Test timeout computed to be: 10000000 239: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_index_iterators_index_bidirectional_search. 239: Return code was 0. 239: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/index_iterators/index_bidirectional_search.cpp.stdout", "None". 239: Standard output was as expected. 239: Standard error was as expected. 234/411 Test #239: test_demo_tutorial_index_iterators_index_bidirectional_search ..................... Passed 0.08 sec test 242 Start 242: test_demo_tutorial_index_iterators_index_search 242: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_index_iterators_index_search" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/index_iterators/index_search.cpp.stdout" 242: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 242: Test timeout computed to be: 10000000 235/411 Test #237: test_demo_tutorial_index_iterators_index_assignment1 .............................. Passed 0.10 sec test 243 Start 243: test_demo_tutorial_index_iterators_index_search2 243: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_index_iterators_index_search2" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/index_iterators/index_search2.cpp.stdout" 243: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 243: Test timeout computed to be: 10000000 242: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_index_iterators_index_search. 241: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_index_iterators_index_property_maps. 242: Return code was 0. 242: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/index_iterators/index_search.cpp.stdout", "None". 242: Standard output was as expected. 242: Standard error was as expected. 240: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_index_iterators_index_preorder. 241: Return code was 0. 241: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/index_iterators/index_property_maps.cpp.stdout", "None". 241: Standard output was as expected. 241: Standard error was as expected. 240: Return code was 0. 240: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/index_iterators/index_preorder.cpp.stdout", "None". 240: Standard output was as expected. 240: Standard error was as expected. 236/411 Test #242: test_demo_tutorial_index_iterators_index_search ................................... Passed 0.06 sec test 244 Start 244: test_demo_tutorial_index_iterators_iterator_assignment2 244: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_index_iterators_iterator_assignment2" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/index_iterators/iterator_assignment2.cpp.stdout" 244: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 244: Test timeout computed to be: 10000000 237/411 Test #241: test_demo_tutorial_index_iterators_index_property_maps ............................ Passed 0.08 sec test 245 Start 245: test_demo_tutorial_index_iterators_iterator_solution1 245: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_index_iterators_iterator_solution1" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/index_iterators/iterator_solution1.cpp.stdout" 245: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 245: Test timeout computed to be: 10000000 238/411 Test #240: test_demo_tutorial_index_iterators_index_preorder ................................. Passed 0.11 sec test 246 Start 246: test_demo_tutorial_index_iterators_iterator_solution2 246: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_index_iterators_iterator_solution2" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/index_iterators/iterator_solution2.cpp.stdout" 246: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 246: Test timeout computed to be: 10000000 243: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_index_iterators_index_search2. 243: Return code was 0. 243: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/index_iterators/index_search2.cpp.stdout", "None". 243: Standard output was as expected. 243: Standard error was as expected. 245: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_index_iterators_iterator_solution1. 239/411 Test #243: test_demo_tutorial_index_iterators_index_search2 .................................. Passed 0.10 sec test 247 Start 247: test_demo_tutorial_index_iterators_iterator_solution3 247: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_index_iterators_iterator_solution3" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/index_iterators/iterator_solution3.cpp.stdout" 247: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 247: Test timeout computed to be: 10000000 245: Return code was 0. 245: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/index_iterators/iterator_solution1.cpp.stdout", "None". 245: Standard output was as expected. 245: Standard error was as expected. 53: BidirectionalFMIndexTest_SearchInStringSet type parameter seqan2::Index, seqan2::Alloc >, seqan2::BidirectionalIndex > > > OK 240/411 Test #245: test_demo_tutorial_index_iterators_iterator_solution1 ............................. Passed 0.06 sec test 248 Start 248: test_demo_tutorial_indexed_fasta_io_base 248: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_indexed_fasta_io_base" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/indexed_fasta_io/base.cpp.stdout" 248: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 248: Test timeout computed to be: 10000000 246: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_index_iterators_iterator_solution2. 244: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_index_iterators_iterator_assignment2. 246: Return code was 0. 246: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/index_iterators/iterator_solution2.cpp.stdout", "None". 246: Standard output was as expected. 246: Standard error was as expected. 244: Return code was 0. 244: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/index_iterators/iterator_assignment2.cpp.stdout", "None". 244: Standard output was as expected. 244: Standard error was as expected. 241/411 Test #246: test_demo_tutorial_index_iterators_iterator_solution2 ............................. Passed 0.08 sec test 249 Start 249: test_demo_tutorial_indexed_fasta_io_solution1 249: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_indexed_fasta_io_solution1" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/indexed_fasta_io/solution1.cpp.stdout" "--stderr-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/indexed_fasta_io/solution1.cpp.stderr" 249: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 249: Test timeout computed to be: 10000000 242/411 Test #244: test_demo_tutorial_index_iterators_iterator_assignment2 ........................... Passed 0.10 sec test 250 Start 250: test_demo_tutorial_indexed_fasta_io_solution2 250: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_indexed_fasta_io_solution2" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/indexed_fasta_io/solution2.cpp.stdout" "--stderr-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/indexed_fasta_io/solution2.cpp.stderr" 250: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 250: Test timeout computed to be: 10000000 248: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_indexed_fasta_io_base. 248: Return code was 0. 248: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/indexed_fasta_io/base.cpp.stdout", "None". 248: Standard output was as expected. 248: Standard error was as expected. 247: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_index_iterators_iterator_solution3. 243/411 Test #248: test_demo_tutorial_indexed_fasta_io_base .......................................... Passed 0.07 sec test 251 Start 251: test_demo_tutorial_indices_assignment_1 251: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_indices_assignment_1" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/indices/assignment_1.cpp.stdout" 251: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 251: Test timeout computed to be: 10000000 247: Return code was 0. 247: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/index_iterators/iterator_solution3.cpp.stdout", "None". 247: Standard output was as expected. 247: Standard error was as expected. 249: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_indexed_fasta_io_solution1. 249: Return code was 0. 249: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/indexed_fasta_io/solution1.cpp.stdout", "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/indexed_fasta_io/solution1.cpp.stderr". 249: Standard output was as expected. 249: Standard error was as expected. 244/411 Test #247: test_demo_tutorial_index_iterators_iterator_solution3 ............................. Passed 0.10 sec test 252 Start 252: test_demo_tutorial_indices_assignment_2 252: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_indices_assignment_2" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/indices/assignment_2.cpp.stdout" 252: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 252: Test timeout computed to be: 10000000 250: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_indexed_fasta_io_solution2. 245/411 Test #249: test_demo_tutorial_indexed_fasta_io_solution1 ..................................... Passed 0.07 sec test 253 Start 253: test_demo_tutorial_indices_base 253: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_indices_base" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/indices/base.cpp.stdout" 253: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 253: Test timeout computed to be: 10000000 250: Return code was 0. 250: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/indexed_fasta_io/solution2.cpp.stdout", "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/indexed_fasta_io/solution2.cpp.stderr". 250: Standard output was as expected. 250: Standard error was as expected. 251: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_indices_assignment_1. 251: Return code was 0. 251: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/indices/assignment_1.cpp.stdout", "None". 251: Standard output was as expected. 251: Standard error was as expected. 246/411 Test #250: test_demo_tutorial_indexed_fasta_io_solution2 ..................................... Passed 0.09 sec test 254 Start 254: test_demo_tutorial_iterators_assignment_1 254: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_iterators_assignment_1" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/iterators/assignment_1.cpp.stdout" 254: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 254: Test timeout computed to be: 10000000 247/411 Test #251: test_demo_tutorial_indices_assignment_1 ........................................... Passed 0.07 sec test 255 Start 255: test_demo_tutorial_iterators_assignment_1_solution 255: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_iterators_assignment_1_solution" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/iterators/assignment_1_solution.cpp.stdout" 255: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 255: Test timeout computed to be: 10000000 253: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_indices_base. 252: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_indices_assignment_2. 252: Return code was 0. 252: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/indices/assignment_2.cpp.stdout", "None". 252: Standard output was as expected. 252: Standard error was as expected. 253: Return code was 0. 253: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/indices/base.cpp.stdout", "None". 253: Standard output was as expected. 253: Standard error was as expected. 255: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_iterators_assignment_1_solution. 255: Return code was 0. 255: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/iterators/assignment_1_solution.cpp.stdout", "None". 255: Standard output was as expected. 255: Standard error was as expected. 254: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_iterators_assignment_1. 67: test_journaled_string_tree_find_shiftand OK 254: Return code was 0. 254: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/iterators/assignment_1.cpp.stdout", "None". 248/411 Test #253: test_demo_tutorial_indices_base ................................................... Passed 0.10 sec test 256 Start 256: test_demo_tutorial_iterators_assignment_2_solution 256: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_iterators_assignment_2_solution" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/iterators/assignment_2_solution.cpp.stdout" 256: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 256: Test timeout computed to be: 10000000 249/411 Test #252: test_demo_tutorial_indices_assignment_2 ........................................... Passed 0.12 sec test 257 Start 257: test_demo_tutorial_iterators_assignment_3_workshop 257: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_iterators_assignment_3_workshop" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/iterators/assignment_3_workshop.cpp.stdout" 257: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 257: Test timeout computed to be: 10000000 254: Standard output was as expected. 254: Standard error was as expected. 250/411 Test #255: test_demo_tutorial_iterators_assignment_1_solution ................................ Passed 0.08 sec test 258 Start 258: test_demo_tutorial_iterators_assignment_3_workshop_solution 258: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_iterators_assignment_3_workshop_solution" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/iterators/assignment_3_workshop_solution.cpp.stdout" 258: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 258: Test timeout computed to be: 10000000 251/411 Test #254: test_demo_tutorial_iterators_assignment_1 ......................................... Passed 0.09 sec test 259 Start 259: test_demo_tutorial_iterators_assignment_4_workshop_solution 259: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_iterators_assignment_4_workshop_solution" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/iterators/assignment_4_workshop_solution.cpp.stdout" 259: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 259: Test timeout computed to be: 10000000 256: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_iterators_assignment_2_solution. 259: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_iterators_assignment_4_workshop_solution. 257: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_iterators_assignment_3_workshop. 256: Return code was 0. 256: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/iterators/assignment_2_solution.cpp.stdout", "None". 258: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_iterators_assignment_3_workshop_solution. 256: Standard output was as expected. 256: Standard error was as expected. 258: Return code was 0. 258: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/iterators/assignment_3_workshop_solution.cpp.stdout", "None". 257: Return code was 0. 257: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/iterators/assignment_3_workshop.cpp.stdout", "None". 257: Standard output was as expected. 257: Standard error was as expected. 258: Standard output was as expected. 258: Standard error was as expected. 259: Return code was 0. 259: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/iterators/assignment_4_workshop_solution.cpp.stdout", "None". 259: Standard output was as expected. 259: Standard error was as expected. 252/411 Test #257: test_demo_tutorial_iterators_assignment_3_workshop ................................ Passed 0.11 sec test 260 Start 260: test_demo_tutorial_iterators_base 260: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_iterators_base" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/iterators/base.cpp.stdout" 260: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 260: Test timeout computed to be: 10000000 253/411 Test #256: test_demo_tutorial_iterators_assignment_2_solution ................................ Passed 0.11 sec 254/411 Test #259: test_demo_tutorial_iterators_assignment_4_workshop_solution ....................... Passed 0.10 sec test 261 Start 261: test_demo_tutorial_iterators_sequence_iterator_demo 261: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_iterators_sequence_iterator_demo" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/iterators/sequence_iterator_demo.cpp.stdout" 261: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 261: Test timeout computed to be: 10000000 test 262 Start 262: test_demo_tutorial_journaled_set_base 262: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_journaled_set_base" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/journaled_set/base.cpp.stdout" 262: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 262: Test timeout computed to be: 10000000 255/411 Test #258: test_demo_tutorial_iterators_assignment_3_workshop_solution ....................... Passed 0.12 sec test 263 Start 263: test_demo_tutorial_journaled_set_example_join 263: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_journaled_set_example_join" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/journaled_set/example_join.cpp.stdout" 263: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 263: Test timeout computed to be: 10000000 260: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_iterators_base. 260: Return code was 0. 260: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/iterators/base.cpp.stdout", "None". 260: Standard output was as expected. 260: Standard error was as expected. 256/411 Test #260: test_demo_tutorial_iterators_base ................................................. Passed 0.06 sec test 264 Start 264: test_demo_tutorial_journaled_set_example_journal_string_basic 264: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_journaled_set_example_journal_string_basic" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/journaled_set/example_journal_string_basic.cpp.stdout" 264: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 264: Test timeout computed to be: 10000000 262: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_journaled_set_base. 262: Return code was 0. 262: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/journaled_set/base.cpp.stdout", "None". 262: Standard output was as expected. 262: Standard error was as expected. 261: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_iterators_sequence_iterator_demo. 261: Return code was 0. 261: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/iterators/sequence_iterator_demo.cpp.stdout", "None". 261: Standard output was as expected. 261: Standard error was as expected. 263: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_journaled_set_example_join. 257/411 Test #261: test_demo_tutorial_iterators_sequence_iterator_demo ............................... Passed 0.08 sec test 265 Start 265: test_demo_tutorial_journaled_set_example_online_search 265: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_journaled_set_example_online_search" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/journaled_set/example_online_search.cpp.stdout" 265: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 265: Test timeout computed to be: 10000000 263: Return code was 0. 263: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/journaled_set/example_join.cpp.stdout", "None". 263: Standard output was as expected. 263: Standard error was as expected. 258/411 Test #262: test_demo_tutorial_journaled_set_base ............................................. Passed 0.08 sec test 266 Start 266: test_demo_tutorial_journaled_set_example_online_search_assignment1_hint 266: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_journaled_set_example_online_search_assignment1_hint" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/journaled_set/example_online_search_assignment1_hint.cpp.stdout" 266: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 266: Test timeout computed to be: 10000000 259/411 Test #263: test_demo_tutorial_journaled_set_example_join ..................................... Passed 0.09 sec test 267 Start 267: test_demo_tutorial_journaled_set_solution_online_search_assignment1 267: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_journaled_set_solution_online_search_assignment1" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/journaled_set/solution_online_search_assignment1.cpp.stdout" 267: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 267: Test timeout computed to be: 10000000 264: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_journaled_set_example_journal_string_basic. 264: Return code was 0. 264: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/journaled_set/example_journal_string_basic.cpp.stdout", "None". 264: Standard output was as expected. 264: Standard error was as expected. 260/411 Test #264: test_demo_tutorial_journaled_set_example_journal_string_basic ..................... Passed 0.09 sec test 268 Start 268: test_demo_tutorial_journaled_set_solution_online_search_assignment2 268: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_journaled_set_solution_online_search_assignment2" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/journaled_set/solution_online_search_assignment2.cpp.stdout" 268: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 268: Test timeout computed to be: 10000000 265: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_journaled_set_example_online_search. 267: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_journaled_set_solution_online_search_assignment1. 266: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_journaled_set_example_online_search_assignment1_hint. 266: Return code was 0. 266: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/journaled_set/example_online_search_assignment1_hint.cpp.stdout", "None". 266: Standard output was as expected. 266: Standard error was as expected. 261/411 Test #266: test_demo_tutorial_journaled_set_example_online_search_assignment1_hint ........... Passed 0.09 sec test 269 Start 269: test_demo_tutorial_journaled_set_solution_online_search_assignment3 269: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_journaled_set_solution_online_search_assignment3" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/journaled_set/solution_online_search_assignment3.cpp.stdout" 269: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 269: Test timeout computed to be: 10000000 268: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_journaled_set_solution_online_search_assignment2. 265: Return code was 0. 265: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/journaled_set/example_online_search.cpp.stdout", "None". 265: Standard output was as expected. 265: Standard error was as expected. 269: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_journaled_set_solution_online_search_assignment3. 262/411 Test #265: test_demo_tutorial_journaled_set_example_online_search ............................ Passed 0.18 sec test 270 Start 270: test_demo_tutorial_journaled_set_solution_online_search_assignment4 270: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_journaled_set_solution_online_search_assignment4" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/journaled_set/solution_online_search_assignment4.cpp.stdout" 270: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 270: Test timeout computed to be: 10000000 267: Return code was 0. 267: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/journaled_set/solution_online_search_assignment1.cpp.stdout", "None". 267: Standard output was as expected. 267: Standard error was as expected. 263/411 Test #267: test_demo_tutorial_journaled_set_solution_online_search_assignment1 ............... Passed 0.20 sec test 271 Start 271: test_demo_tutorial_journaled_set_solution_online_search_finder 271: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_journaled_set_solution_online_search_finder" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/journaled_set/solution_online_search_finder.cpp.stdout" 271: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 271: Test timeout computed to be: 10000000 270: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_journaled_set_solution_online_search_assignment4. 268: Return code was 0. 268: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/journaled_set/solution_online_search_assignment2.cpp.stdout", "None". 268: Standard output was as expected. 268: Standard error was as expected. 271: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_journaled_set_solution_online_search_finder. 269: Return code was 0. 269: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/journaled_set/solution_online_search_assignment3.cpp.stdout", "None". 269: Standard output was as expected. 269: Standard error was as expected. 264/411 Test #268: test_demo_tutorial_journaled_set_solution_online_search_assignment2 ............... Passed 0.23 sec test 272 Start 272: test_demo_tutorial_journaled_string_tree_journaled_string_tree_base 272: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_journaled_string_tree_journaled_string_tree_base" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/journaled_string_tree/journaled_string_tree_base.cpp.stdout" 272: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 272: Test timeout computed to be: 10000000 265/411 Test #269: test_demo_tutorial_journaled_set_solution_online_search_assignment3 ............... Passed 0.18 sec test 273 Start 273: test_demo_tutorial_journaled_string_tree_journaled_string_tree_base_assignment1 273: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_journaled_string_tree_journaled_string_tree_base_assignment1" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/journaled_string_tree/journaled_string_tree_base_assignment1.cpp.stdout" 273: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 273: Test timeout computed to be: 10000000 272: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_journaled_string_tree_journaled_string_tree_base. 271: Return code was 0. 271: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/journaled_set/solution_online_search_finder.cpp.stdout", "None". 271: Standard output was as expected. 271: Standard error was as expected. 266/411 Test #271: test_demo_tutorial_journaled_set_solution_online_search_finder .................... Passed 0.11 sec test 274 Start 274: test_demo_tutorial_metafunctions_assignment1_solution 274: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_metafunctions_assignment1_solution" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/metafunctions/assignment1_solution.cpp.stdout" 274: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 274: Test timeout computed to be: 10000000 272: Return code was 0. 272: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/journaled_string_tree/journaled_string_tree_base.cpp.stdout", "None". 272: Standard output was as expected. 272: Standard error was as expected. 270: Return code was 0. 270: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/journaled_set/solution_online_search_assignment4.cpp.stdout", "None". 270: Standard output was as expected. 270: Standard error was as expected. 267/411 Test #272: test_demo_tutorial_journaled_string_tree_journaled_string_tree_base ............... Passed 0.08 sec test 275 Start 275: test_demo_tutorial_metafunctions_base 275: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_metafunctions_base" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/metafunctions/base.cpp.stdout" 275: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 275: Test timeout computed to be: 10000000 273: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_journaled_string_tree_journaled_string_tree_base_assignment1. 268/411 Test #270: test_demo_tutorial_journaled_set_solution_online_search_assignment4 ............... Passed 0.19 sec test 276 Start 276: test_demo_tutorial_modifiers_UNUSED_modcomplementdna 276: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_modifiers_UNUSED_modcomplementdna" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/modifiers/UNUSED_modcomplementdna.cpp.stdout" 276: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 276: Test timeout computed to be: 10000000 273: Return code was 0. 273: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/journaled_string_tree/journaled_string_tree_base_assignment1.cpp.stdout", "None". 273: Standard output was as expected. 273: Standard error was as expected. 269/411 Test #273: test_demo_tutorial_journaled_string_tree_journaled_string_tree_base_assignment1 ... Passed 0.13 sec test 277 Start 277: test_demo_tutorial_modifiers_assignment1 277: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_modifiers_assignment1" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/modifiers/assignment1.cpp.stdout" 277: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 277: Test timeout computed to be: 10000000 274: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_metafunctions_assignment1_solution. 276: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_modifiers_UNUSED_modcomplementdna. 276: Return code was 0. 276: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/modifiers/UNUSED_modcomplementdna.cpp.stdout", "None". 276: Standard output was as expected. 276: Standard error was as expected. 274: Return code was 0. 274: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/metafunctions/assignment1_solution.cpp.stdout", "None". 274: Standard output was as expected. 274: Standard error was as expected. 270/411 Test #276: test_demo_tutorial_modifiers_UNUSED_modcomplementdna .............................. Passed 0.06 sec test 278 Start 278: test_demo_tutorial_modifiers_assignment1_solution 278: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_modifiers_assignment1_solution" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/modifiers/assignment1_solution.cpp.stdout" 278: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 278: Test timeout computed to be: 10000000 271/411 Test #274: test_demo_tutorial_metafunctions_assignment1_solution ............................. Passed 0.11 sec test 279 Start 279: test_demo_tutorial_modifiers_modreverse 279: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_modifiers_modreverse" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/modifiers/modreverse.cpp.stdout" 279: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 279: Test timeout computed to be: 10000000 275: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_metafunctions_base. 275: Return code was 0. 275: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/metafunctions/base.cpp.stdout", "None". 275: Standard output was as expected. 275: Standard error was as expected. 278: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_modifiers_assignment1_solution. 272/411 Test #275: test_demo_tutorial_metafunctions_base ............................................. Passed 0.11 sec test 280 Start 280: test_demo_tutorial_modifiers_modview 280: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_modifiers_modview" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/modifiers/modview.cpp.stdout" 280: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 280: Test timeout computed to be: 10000000 278: Return code was 0. 278: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/modifiers/assignment1_solution.cpp.stdout", "None". 278: Standard output was as expected. 278: Standard error was as expected. 273/411 Test #278: test_demo_tutorial_modifiers_assignment1_solution ................................. Passed 0.05 sec test 281 Start 281: test_demo_tutorial_modifiers_nested 281: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_modifiers_nested" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/modifiers/nested.cpp.stdout" 281: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 281: Test timeout computed to be: 10000000 277: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_modifiers_assignment1. 277: Return code was 0. 277: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/modifiers/assignment1.cpp.stdout", "None". 277: Standard output was as expected. 277: Standard error was as expected. 279: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_modifiers_modreverse. 279: Return code was 0. 279: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/modifiers/modreverse.cpp.stdout", "None". 279: Standard output was as expected. 279: Standard error was as expected. 274/411 Test #279: test_demo_tutorial_modifiers_modreverse ........................................... Passed 0.07 sec test 282 Start 282: test_demo_tutorial_multiple_sequence_alignment_assignment1 282: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_multiple_sequence_alignment_assignment1" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/multiple_sequence_alignment/assignment1.cpp.stdout" 282: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 282: Test timeout computed to be: 10000000 275/411 Test #277: test_demo_tutorial_modifiers_assignment1 .......................................... Passed 0.10 sec test 283 Start 283: test_demo_tutorial_multiple_sequence_alignment_consensus 283: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_multiple_sequence_alignment_consensus" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/multiple_sequence_alignment/consensus.cpp.stdout" 283: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 283: Test timeout computed to be: 10000000 281: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_modifiers_nested. 281: Return code was 0. 281: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/modifiers/nested.cpp.stdout", "None". 281: Standard output was as expected. 281: Standard error was as expected. 280: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_modifiers_modview. 280: Return code was 0. 280: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/modifiers/modview.cpp.stdout", "None". 280: Standard output was as expected. 280: Standard error was as expected. 276/411 Test #281: test_demo_tutorial_modifiers_nested ............................................... Passed 0.06 sec test 284 Start 284: test_demo_tutorial_multiple_sequence_alignment_msa 284: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_multiple_sequence_alignment_msa" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/multiple_sequence_alignment/msa.cpp.stdout" 284: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 284: Test timeout computed to be: 10000000 277/411 Test #280: test_demo_tutorial_modifiers_modview .............................................. Passed 0.08 sec test 285 Start 285: test_demo_tutorial_pairwise_sequence_alignment_alignment_banded 285: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_alignment_banded" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/pairwise_sequence_alignment/alignment_banded.cpp.stdout" 285: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 285: Test timeout computed to be: 10000000 282: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_multiple_sequence_alignment_assignment1. 282: Return code was 0. 282: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/multiple_sequence_alignment/assignment1.cpp.stdout", "None". 284: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_multiple_sequence_alignment_msa. 282: Standard output was as expected. 282: Standard error was as expected. 284: Return code was 0. 284: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/multiple_sequence_alignment/msa.cpp.stdout", "None". 283: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_multiple_sequence_alignment_consensus. 284: Standard output was as expected. 284: Standard error was as expected. 278/411 Test #284: test_demo_tutorial_multiple_sequence_alignment_msa ................................ Passed 0.07 sec test 286 Start 286: test_demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment1 286: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment1" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/pairwise_sequence_alignment/alignment_global_assignment1.cpp.stdout" 286: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 286: Test timeout computed to be: 10000000 279/411 Test #282: test_demo_tutorial_multiple_sequence_alignment_assignment1 ........................ Passed 0.10 sec test 287 Start 287: test_demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment2 287: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment2" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/pairwise_sequence_alignment/alignment_global_assignment2.cpp.stdout" 287: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 287: Test timeout computed to be: 10000000 285: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_alignment_banded. 285: Return code was 0. 285: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/pairwise_sequence_alignment/alignment_banded.cpp.stdout", "None". 285: Standard output was as expected. 285: Standard error was as expected. 286: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment1. 287: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment2. 283: Return code was 0. 283: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/multiple_sequence_alignment/consensus.cpp.stdout", "None". 286: Return code was 0. 286: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/pairwise_sequence_alignment/alignment_global_assignment1.cpp.stdout", "None". 283: Standard output was as expected. 283: Standard error was as expected. 286: Standard output was as expected. 286: Standard error was as expected. 287: Return code was 0. 287: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/pairwise_sequence_alignment/alignment_global_assignment2.cpp.stdout", "None". 287: Standard output was as expected. 287: Standard error was as expected. 280/411 Test #285: test_demo_tutorial_pairwise_sequence_alignment_alignment_banded ................... Passed 0.12 sec test 288 Start 288: test_demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment3 288: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment3" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/pairwise_sequence_alignment/alignment_global_assignment3.cpp.stdout" 288: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 288: Test timeout computed to be: 10000000 281/411 Test #286: test_demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment1 ....... Passed 0.07 sec test 289 Start 289: test_demo_tutorial_pairwise_sequence_alignment_alignment_global_overlap 289: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_alignment_global_overlap" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/pairwise_sequence_alignment/alignment_global_overlap.cpp.stdout" 289: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 289: Test timeout computed to be: 10000000 282/411 Test #287: test_demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment2 ....... Passed 0.07 sec test 290 Start 290: test_demo_tutorial_pairwise_sequence_alignment_alignment_global_specialised 290: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_alignment_global_specialised" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/pairwise_sequence_alignment/alignment_global_specialised.cpp.stdout" 290: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 290: Test timeout computed to be: 10000000 283/411 Test #283: test_demo_tutorial_multiple_sequence_alignment_consensus .......................... Passed 0.18 sec test 291 Start 291: test_demo_tutorial_pairwise_sequence_alignment_alignment_global_standard 291: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_alignment_global_standard" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/pairwise_sequence_alignment/alignment_global_standard.cpp.stdout" 291: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 291: Test timeout computed to be: 10000000 290: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_alignment_global_specialised. 290: Return code was 0. 290: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/pairwise_sequence_alignment/alignment_global_specialised.cpp.stdout", "None". 290: Standard output was as expected. 290: Standard error was as expected. 288: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment3. 289: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_alignment_global_overlap. 288: Return code was 0. 288: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/pairwise_sequence_alignment/alignment_global_assignment3.cpp.stdout", "None". 288: Standard output was as expected. 288: Standard error was as expected. 289: Return code was 0. 289: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/pairwise_sequence_alignment/alignment_global_overlap.cpp.stdout", "None". 289: Standard output was as expected. 289: Standard error was as expected. 284/411 Test #289: test_demo_tutorial_pairwise_sequence_alignment_alignment_global_overlap ........... Passed 0.07 sec test 292 Start 292: test_demo_tutorial_pairwise_sequence_alignment_alignment_local 292: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_alignment_local" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/pairwise_sequence_alignment/alignment_local.cpp.stdout" 292: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 292: Test timeout computed to be: 10000000 285/411 Test #288: test_demo_tutorial_pairwise_sequence_alignment_alignment_global_assignment3 ....... Passed 0.08 sec 286/411 Test #290: test_demo_tutorial_pairwise_sequence_alignment_alignment_global_specialised ....... Passed 0.07 sec test 293 Start 293: test_demo_tutorial_pairwise_sequence_alignment_alignment_local_assignment1 293: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_alignment_local_assignment1" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/pairwise_sequence_alignment/alignment_local_assignment1.cpp.stdout" 293: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 293: Test timeout computed to be: 10000000 test 294 Start 294: test_demo_tutorial_pairwise_sequence_alignment_assignment5 294: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_assignment5" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/pairwise_sequence_alignment/assignment5.cpp.stdout" 294: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 294: Test timeout computed to be: 10000000 291: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_alignment_global_standard. 53: BidirectionalFMIndexTest_SearchInStringSet type parameter seqan2::Index, seqan2::Alloc >, seqan2::BidirectionalIndex > > > OK 53: ************************************** 53: Total Tests: 12 53: Skipped: 0 53: Errors: 0 53: ************************************** 287/411 Test #53: test_test_index_bifm .............................................................. Passed 8.03 sec test 295 Start 295: test_demo_tutorial_pairwise_sequence_alignment_assignment5_step1 295: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_assignment5_step1" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/pairwise_sequence_alignment/assignment5_step1.cpp.stdout" 295: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 295: Test timeout computed to be: 10000000 291: Return code was 0. 291: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/pairwise_sequence_alignment/alignment_global_standard.cpp.stdout", "None". 291: Standard output was as expected. 291: Standard error was as expected. 288/411 Test #291: test_demo_tutorial_pairwise_sequence_alignment_alignment_global_standard .......... Passed 0.10 sec test 296 Start 296: test_demo_tutorial_pairwise_sequence_alignment_assignment5_step2 296: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_assignment5_step2" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/pairwise_sequence_alignment/assignment5_step2.cpp.stdout" 296: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 296: Test timeout computed to be: 10000000 293: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_alignment_local_assignment1. 292: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_alignment_local. 293: Return code was 0. 293: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/pairwise_sequence_alignment/alignment_local_assignment1.cpp.stdout", "None". 295: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_assignment5_step1. 293: Standard output was as expected. 293: Standard error was as expected. 292: Return code was 0. 292: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/pairwise_sequence_alignment/alignment_local.cpp.stdout", "None". 292: Standard output was as expected. 292: Standard error was as expected. 294: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_assignment5. 294: Return code was 0. 294: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/pairwise_sequence_alignment/assignment5.cpp.stdout", "None". 295: Return code was 0. 295: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/pairwise_sequence_alignment/assignment5_step1.cpp.stdout", "None". 295: Standard output was as expected. 295: Standard error was as expected. 294: Standard output was as expected. 294: Standard error was as expected. 289/411 Test #293: test_demo_tutorial_pairwise_sequence_alignment_alignment_local_assignment1 ........ Passed 0.10 sec test 297 Start 297: test_demo_tutorial_pairwise_sequence_alignment_assignment5_step3 297: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_assignment5_step3" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/pairwise_sequence_alignment/assignment5_step3.cpp.stdout" 297: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 297: Test timeout computed to be: 10000000 290/411 Test #292: test_demo_tutorial_pairwise_sequence_alignment_alignment_local .................... Passed 0.12 sec 291/411 Test #295: test_demo_tutorial_pairwise_sequence_alignment_assignment5_step1 .................. Passed 0.10 sec test 298 Start 298: test_demo_tutorial_pairwise_sequence_alignment_assignment5_step4 298: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_assignment5_step4" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/pairwise_sequence_alignment/assignment5_step4.cpp.stdout" 298: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 298: Test timeout computed to be: 10000000 test 299 Start 299: test_demo_tutorial_pairwise_sequence_alignment_assignment5_step5 299: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_assignment5_step5" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/pairwise_sequence_alignment/assignment5_step5.cpp.stdout" 299: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 299: Test timeout computed to be: 10000000 296: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_assignment5_step2. 296: Return code was 0. 296: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/pairwise_sequence_alignment/assignment5_step2.cpp.stdout", "None". 296: Standard output was as expected. 296: Standard error was as expected. 292/411 Test #294: test_demo_tutorial_pairwise_sequence_alignment_assignment5 ........................ Passed 0.12 sec test 300 Start 300: test_demo_tutorial_pairwise_sequence_alignment_assignment5_step6 300: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_assignment5_step6" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/pairwise_sequence_alignment/assignment5_step6.cpp.stdout" 300: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 300: Test timeout computed to be: 10000000 293/411 Test #296: test_demo_tutorial_pairwise_sequence_alignment_assignment5_step2 .................. Passed 0.10 sec test 301 Start 301: test_demo_tutorial_parsing_command_line_arguments_base 301: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_parsing_command_line_arguments_base" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/parsing_command_line_arguments/base.cpp.stdout" 301: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 301: Test timeout computed to be: 10000000 297: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_assignment5_step3. 298: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_assignment5_step4. 297: Return code was 0. 297: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/pairwise_sequence_alignment/assignment5_step3.cpp.stdout", "None". 297: Standard output was as expected. 297: Standard error was as expected. 299: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_assignment5_step5. 300: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_pairwise_sequence_alignment_assignment5_step6. 299: Return code was 0. 299: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/pairwise_sequence_alignment/assignment5_step5.cpp.stdout", "None". 299: Standard output was as expected. 299: Standard error was as expected. 298: Return code was 0. 298: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/pairwise_sequence_alignment/assignment5_step4.cpp.stdout", "None". 298: Standard output was as expected. 298: Standard error was as expected. 294/411 Test #297: test_demo_tutorial_pairwise_sequence_alignment_assignment5_step3 .................. Passed 0.10 sec test 302 Start 302: test_demo_tutorial_pattern_matching_assignment1 302: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_pattern_matching_assignment1" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/pattern_matching/assignment1.cpp.stdout" 302: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 302: Test timeout computed to be: 10000000 300: Return code was 0. 300: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/pairwise_sequence_alignment/assignment5_step6.cpp.stdout", "None". 300: Standard output was as expected. 300: Standard error was as expected. 295/411 Test #298: test_demo_tutorial_pairwise_sequence_alignment_assignment5_step4 .................. Passed 0.10 sec 296/411 Test #299: test_demo_tutorial_pairwise_sequence_alignment_assignment5_step5 .................. Passed 0.09 sec test 303 Start 303: test_demo_tutorial_pattern_matching_assignment1_solution 303: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_pattern_matching_assignment1_solution" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/pattern_matching/assignment1_solution.cpp.stdout" 303: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 303: Test timeout computed to be: 10000000 test 304 Start 304: test_demo_tutorial_pattern_matching_assignment2 304: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_pattern_matching_assignment2" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/pattern_matching/assignment2.cpp.stdout" 304: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 304: Test timeout computed to be: 10000000 301: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_parsing_command_line_arguments_base. 301: Return code was 0. 301: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/parsing_command_line_arguments/base.cpp.stdout", "None". 301: Standard output was as expected. 301: Standard error was as expected. 297/411 Test #300: test_demo_tutorial_pairwise_sequence_alignment_assignment5_step6 .................. Passed 0.10 sec test 305 Start 305: test_demo_tutorial_pattern_matching_assignment2_solution 305: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_pattern_matching_assignment2_solution" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/pattern_matching/assignment2_solution.cpp.stdout" 305: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 305: Test timeout computed to be: 10000000 298/411 Test #301: test_demo_tutorial_parsing_command_line_arguments_base ............................ Passed 0.09 sec test 306 Start 306: test_demo_tutorial_pattern_matching_assignment3 306: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_pattern_matching_assignment3" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/pattern_matching/assignment3.cpp.stdout" 306: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 306: Test timeout computed to be: 10000000 306: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_pattern_matching_assignment3. 306: Return code was 0. 306: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/pattern_matching/assignment3.cpp.stdout", "None". 306: Standard output was as expected. 306: Standard error was as expected. 303: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_pattern_matching_assignment1_solution. 302: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_pattern_matching_assignment1. 302: Return code was 0. 302: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/pattern_matching/assignment1.cpp.stdout", "None". 302: Standard output was as expected. 302: Standard error was as expected. 304: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_pattern_matching_assignment2. 303: Return code was 0. 303: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/pattern_matching/assignment1_solution.cpp.stdout", "None". 299/411 Test #306: test_demo_tutorial_pattern_matching_assignment3 ................................... Passed 0.06 sec 303: Standard output was as expected. 303: Standard error was as expected. test 307 Start 307: test_demo_tutorial_pattern_matching_assignment3_solution 307: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_pattern_matching_assignment3_solution" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/pattern_matching/assignment3_solution.cpp.stdout" 307: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 307: Test timeout computed to be: 10000000 305: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_pattern_matching_assignment2_solution. 304: Return code was 0. 304: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/pattern_matching/assignment2.cpp.stdout", "None". 304: Standard output was as expected. 304: Standard error was as expected. 305: Return code was 0. 305: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/pattern_matching/assignment2_solution.cpp.stdout", "None". 305: Standard output was as expected. 305: Standard error was as expected. 300/411 Test #302: test_demo_tutorial_pattern_matching_assignment1 ................................... Passed 0.10 sec test 308 Start 308: test_demo_tutorial_pattern_matching_find_approx 308: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_pattern_matching_find_approx" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/pattern_matching/find_approx.cpp.stdout" 308: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 308: Test timeout computed to be: 10000000 301/411 Test #303: test_demo_tutorial_pattern_matching_assignment1_solution .......................... Passed 0.10 sec test 309 Start 309: test_demo_tutorial_pattern_matching_find_exact 309: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_pattern_matching_find_exact" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/pattern_matching/find_exact.cpp.stdout" 309: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 309: Test timeout computed to be: 10000000 302/411 Test #304: test_demo_tutorial_pattern_matching_assignment2 ................................... Passed 0.10 sec 303/411 Test #305: test_demo_tutorial_pattern_matching_assignment2_solution .......................... Passed 0.09 sec test 310 Start 310: test_demo_tutorial_pattern_matching_find_index 310: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_pattern_matching_find_index" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/pattern_matching/find_index.cpp.stdout" 310: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 310: Test timeout computed to be: 10000000 test 311 Start 311: test_demo_tutorial_pattern_matching_find_index_multiple 311: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_pattern_matching_find_index_multiple" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/pattern_matching/find_index_multiple.cpp.stdout" 311: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 311: Test timeout computed to be: 10000000 307: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_pattern_matching_assignment3_solution. 307: Return code was 0. 307: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/pattern_matching/assignment3_solution.cpp.stdout", "None". 307: Standard output was as expected. 307: Standard error was as expected. 309: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_pattern_matching_find_exact. 304/411 Test #307: test_demo_tutorial_pattern_matching_assignment3_solution .......................... Passed 0.07 sec test 312 Start 312: test_demo_tutorial_q_gram_index_index_assignment5 312: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_q_gram_index_index_assignment5" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/q_gram_index/index_assignment5.cpp.stdout" 312: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 312: Test timeout computed to be: 10000000 309: Return code was 0. 309: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/pattern_matching/find_exact.cpp.stdout", "None". 309: Standard output was as expected. 309: Standard error was as expected. 311: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_pattern_matching_find_index_multiple. 311: Return code was 0. 311: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/pattern_matching/find_index_multiple.cpp.stdout", "None". 305/411 Test #309: test_demo_tutorial_pattern_matching_find_exact .................................... Passed 0.07 sec 311: Standard output was as expected. 311: Standard error was as expected. test 313 Start 313: test_demo_tutorial_q_gram_index_index_assignment6 313: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_q_gram_index_index_assignment6" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/q_gram_index/index_assignment6.cpp.stdout" 313: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 313: Test timeout computed to be: 10000000 308: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_pattern_matching_find_approx. 306/411 Test #311: test_demo_tutorial_pattern_matching_find_index_multiple ........................... Passed 0.06 sec test 314 Start 314: test_demo_tutorial_q_gram_index_index_qgram 314: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_q_gram_index_index_qgram" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/q_gram_index/index_qgram.cpp.stdout" 314: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 314: Test timeout computed to be: 10000000 310: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_pattern_matching_find_index. 308: Return code was 0. 308: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/pattern_matching/find_approx.cpp.stdout", "None". 308: Standard output was as expected. 308: Standard error was as expected. 310: Return code was 0. 310: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/pattern_matching/find_index.cpp.stdout", "None". 310: Standard output was as expected. 310: Standard error was as expected. 307/411 Test #308: test_demo_tutorial_pattern_matching_find_approx ................................... Passed 0.10 sec test 315 Start 315: test_demo_tutorial_q_gram_index_index_qgram_hash 315: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_q_gram_index_index_qgram_hash" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/q_gram_index/index_qgram_hash.cpp.stdout" 315: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 315: Test timeout computed to be: 10000000 312: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_q_gram_index_index_assignment5. 312: Return code was 0. 312: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/q_gram_index/index_assignment5.cpp.stdout", "None". 312: Standard output was as expected. 312: Standard error was as expected. 313: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_q_gram_index_index_assignment6. 308/411 Test #312: test_demo_tutorial_q_gram_index_index_assignment5 ................................. Passed 0.06 sec test 316 Start 316: test_demo_tutorial_realignment_step1 316: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_realignment_step1" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/realignment/step1.cpp.stdout" 316: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 316: Test timeout computed to be: 10000000 309/411 Test #310: test_demo_tutorial_pattern_matching_find_index .................................... Passed 0.11 sec test 317 Start 317: test_demo_tutorial_realignment_step2 317: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_realignment_step2" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/realignment/step2.cpp.stdout" 317: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 317: Test timeout computed to be: 10000000 313: Return code was 0. 313: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/q_gram_index/index_assignment6.cpp.stdout", "None". 313: Standard output was as expected. 313: Standard error was as expected. 314: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_q_gram_index_index_qgram. 314: Return code was 0. 314: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/q_gram_index/index_qgram.cpp.stdout", "None". 314: Standard output was as expected. 314: Standard error was as expected. 310/411 Test #313: test_demo_tutorial_q_gram_index_index_assignment6 ................................. Passed 0.07 sec test 318 Start 318: test_demo_tutorial_sam_and_bam_io_base 318: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sam_and_bam_io_base" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sam_and_bam_io/base.cpp.stdout" 318: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 318: Test timeout computed to be: 10000000 315: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_q_gram_index_index_qgram_hash. 311/411 Test #314: test_demo_tutorial_q_gram_index_index_qgram ....................................... Passed 0.07 sec test 319 Start 319: test_demo_tutorial_sam_and_bam_io_example1 319: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sam_and_bam_io_example1" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sam_and_bam_io/example1.cpp.stdout" 319: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 319: Test timeout computed to be: 10000000 315: Return code was 0. 315: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/q_gram_index/index_qgram_hash.cpp.stdout", "None". 315: Standard output was as expected. 315: Standard error was as expected. 317: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_realignment_step2. 312/411 Test #315: test_demo_tutorial_q_gram_index_index_qgram_hash .................................. Passed 0.08 sec test 320 Start 320: test_demo_tutorial_sam_and_bam_io_example2 320: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sam_and_bam_io_example2" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sam_and_bam_io/example2.cpp.stdout" 320: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 320: Test timeout computed to be: 10000000 318: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sam_and_bam_io_base. 316: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_realignment_step1. 318: Return code was 0. 318: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sam_and_bam_io/base.cpp.stdout", "None". 318: Standard output was as expected. 318: Standard error was as expected. 316: Return code was 0. 316: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/realignment/step1.cpp.stdout", "None". 316: Standard output was as expected. 316: Standard error was as expected. 313/411 Test #318: test_demo_tutorial_sam_and_bam_io_base ............................................ Passed 0.06 sec test 321 Start 321: test_demo_tutorial_sam_and_bam_io_example7 321: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sam_and_bam_io_example7" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sam_and_bam_io/example7.cpp.stdout" 321: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 321: Test timeout computed to be: 10000000 319: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sam_and_bam_io_example1. 314/411 Test #316: test_demo_tutorial_realignment_step1 .............................................. Passed 0.10 sec test 322 Start 322: test_demo_tutorial_sam_and_bam_io_solution1 322: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sam_and_bam_io_solution1" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sam_and_bam_io/solution1.cpp.stdout" 322: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 322: Test timeout computed to be: 10000000 319: Return code was 0. 319: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sam_and_bam_io/example1.cpp.stdout", "None". 319: Standard output was as expected. 319: Standard error was as expected. 315/411 Test #319: test_demo_tutorial_sam_and_bam_io_example1 ........................................ Passed 0.09 sec 320: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sam_and_bam_io_example2. test 323 Start 323: test_demo_tutorial_sam_and_bam_io_solution2 323: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sam_and_bam_io_solution2" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sam_and_bam_io/solution2.cpp.stdout" 323: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 323: Test timeout computed to be: 10000000 321: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sam_and_bam_io_example7. 320: Return code was 0. 320: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sam_and_bam_io/example2.cpp.stdout", "None". 320: Standard output was as expected. 320: Standard error was as expected. 322: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sam_and_bam_io_solution1. 316/411 Test #320: test_demo_tutorial_sam_and_bam_io_example2 ........................................ Passed 0.09 sec test 324 Start 324: test_demo_tutorial_sam_and_bam_io_solution3 324: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sam_and_bam_io_solution3" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sam_and_bam_io/solution3.cpp.stdout" 324: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 324: Test timeout computed to be: 10000000 322: Return code was 0. 322: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sam_and_bam_io/solution1.cpp.stdout", "None". 322: Standard output was as expected. 322: Standard error was as expected. 321: Return code was 0. 321: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sam_and_bam_io/example7.cpp.stdout", "None". 321: Standard output was as expected. 321: Standard error was as expected. 317/411 Test #322: test_demo_tutorial_sam_and_bam_io_solution1 ....................................... Passed 0.07 sec test 325 Start 325: test_demo_tutorial_seed_and_extend_example1 325: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_seed_and_extend_example1" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/seed_and_extend/example1.cpp.stdout" 325: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 325: Test timeout computed to be: 10000000 318/411 Test #321: test_demo_tutorial_sam_and_bam_io_example7 ........................................ Passed 0.09 sec test 326 Start 326: test_demo_tutorial_seed_and_extend_example2 326: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_seed_and_extend_example2" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/seed_and_extend/example2.cpp.stdout" 326: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 326: Test timeout computed to be: 10000000 323: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sam_and_bam_io_solution2. 323: Return code was 0. 323: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sam_and_bam_io/solution2.cpp.stdout", "None". 323: Standard output was as expected. 323: Standard error was as expected. 319/411 Test #323: test_demo_tutorial_sam_and_bam_io_solution2 ....................................... Passed 0.09 sec test 327 Start 327: test_demo_tutorial_seed_and_extend_example3 327: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_seed_and_extend_example3" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/seed_and_extend/example3.cpp.stdout" 327: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 327: Test timeout computed to be: 10000000 326: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_seed_and_extend_example2. 317: Return code was 0. 317: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/realignment/step2.cpp.stdout", "None". 317: Standard output was as expected. 317: Standard error was as expected. 326: Return code was 0. 326: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/seed_and_extend/example2.cpp.stdout", "None". 326: Standard output was as expected. 326: Standard error was as expected. 324: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sam_and_bam_io_solution3. 324: Return code was 0. 324: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sam_and_bam_io/solution3.cpp.stdout", "None". 324: Standard output was as expected. 324: Standard error was as expected. 320/411 Test #317: test_demo_tutorial_realignment_step2 .............................................. Passed 0.23 sec test 328 Start 328: test_demo_tutorial_seed_and_extend_example4 328: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_seed_and_extend_example4" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/seed_and_extend/example4.cpp.stdout" 328: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 328: Test timeout computed to be: 10000000 321/411 Test #326: test_demo_tutorial_seed_and_extend_example2 ....................................... Passed 0.07 sec test 329 Start 329: test_demo_tutorial_seed_and_extend_example5 329: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_seed_and_extend_example5" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/seed_and_extend/example5.cpp.stdout" 329: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 329: Test timeout computed to be: 10000000 325: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_seed_and_extend_example1. 325: Return code was 0. 325: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/seed_and_extend/example1.cpp.stdout", "None". 325: Standard output was as expected. 325: Standard error was as expected. 322/411 Test #324: test_demo_tutorial_sam_and_bam_io_solution3 ....................................... Passed 0.11 sec test 330 Start 330: test_demo_tutorial_seed_and_extend_example6 330: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_seed_and_extend_example6" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/seed_and_extend/example6.cpp.stdout" 330: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 330: Test timeout computed to be: 10000000 327: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_seed_and_extend_example3. 327: Return code was 0. 327: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/seed_and_extend/example3.cpp.stdout", "None". 327: Standard output was as expected. 327: Standard error was as expected. 323/411 Test #325: test_demo_tutorial_seed_and_extend_example1 ....................................... Passed 0.10 sec test 331 Start 331: test_demo_tutorial_seed_and_extend_example7 331: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_seed_and_extend_example7" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/seed_and_extend/example7.cpp.stdout" 331: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 331: Test timeout computed to be: 10000000 324/411 Test #327: test_demo_tutorial_seed_and_extend_example3 ....................................... Passed 0.07 sec test 332 Start 332: test_demo_tutorial_seed_and_extend_solution1 332: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_seed_and_extend_solution1" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/seed_and_extend/solution1.cpp.stdout" 332: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 332: Test timeout computed to be: 10000000 329: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_seed_and_extend_example5. 329: Return code was 0. 329: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/seed_and_extend/example5.cpp.stdout", "None". 329: Standard output was as expected. 329: Standard error was as expected. 328: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_seed_and_extend_example4. 325/411 Test #329: test_demo_tutorial_seed_and_extend_example5 ....................................... Passed 0.07 sec test 333 Start 333: test_demo_tutorial_seed_and_extend_solution2 333: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_seed_and_extend_solution2" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/seed_and_extend/solution2.cpp.stdout" 333: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 333: Test timeout computed to be: 10000000 328: Return code was 0. 328: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/seed_and_extend/example4.cpp.stdout", "None". 328: Standard output was as expected. 328: Standard error was as expected. 326/411 Test #328: test_demo_tutorial_seed_and_extend_example4 ....................................... Passed 0.09 sec test 334 Start 334: test_demo_tutorial_seed_and_extend_solution3 334: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_seed_and_extend_solution3" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/seed_and_extend/solution3.cpp.stdout" 334: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 334: Test timeout computed to be: 10000000 330: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_seed_and_extend_example6. 330: Return code was 0. 330: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/seed_and_extend/example6.cpp.stdout", "None". 330: Standard output was as expected. 330: Standard error was as expected. 331: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_seed_and_extend_example7. 327/411 Test #330: test_demo_tutorial_seed_and_extend_example6 ....................................... Passed 0.09 sec 331: Return code was 0. 331: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/seed_and_extend/example7.cpp.stdout", "None". 332: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_seed_and_extend_solution1. test 335 Start 335: test_demo_tutorial_seed_and_extend_solution4 335: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_seed_and_extend_solution4" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/seed_and_extend/solution4.cpp.stdout" 335: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 335: Test timeout computed to be: 10000000 331: Standard output was as expected. 331: Standard error was as expected. 332: Return code was 0. 332: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/seed_and_extend/solution1.cpp.stdout", "None". 332: Standard output was as expected. 332: Standard error was as expected. 328/411 Test #331: test_demo_tutorial_seed_and_extend_example7 ....................................... Passed 0.10 sec test 336 Start 336: test_demo_tutorial_seed_and_extend_solution5 336: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_seed_and_extend_solution5" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/seed_and_extend/solution5.cpp.stdout" 336: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 336: Test timeout computed to be: 10000000 329/411 Test #332: test_demo_tutorial_seed_and_extend_solution1 ...................................... Passed 0.09 sec test 337 Start 337: test_demo_tutorial_seed_and_extend_solution6 337: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_seed_and_extend_solution6" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/seed_and_extend/solution6.cpp.stdout" 337: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 337: Test timeout computed to be: 10000000 333: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_seed_and_extend_solution2. 334: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_seed_and_extend_solution3. 334: Return code was 0. 334: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/seed_and_extend/solution3.cpp.stdout", "None". 333: Return code was 0. 333: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/seed_and_extend/solution2.cpp.stdout", "None". 333: Standard output was as expected. 333: Standard error was as expected. 334: Standard output was as expected. 334: Standard error was as expected. 330/411 Test #333: test_demo_tutorial_seed_and_extend_solution2 ...................................... Passed 0.08 sec test 338 Start 338: test_demo_tutorial_seeds_example1 338: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_seeds_example1" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/seeds/example1.cpp.stdout" 338: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 338: Test timeout computed to be: 10000000 331/411 Test #334: test_demo_tutorial_seed_and_extend_solution3 ...................................... Passed 0.07 sec test 339 Start 339: test_demo_tutorial_sequence_io_base 339: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sequence_io_base" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequence_io/base.cpp.stdout" 339: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 339: Test timeout computed to be: 10000000 337: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_seed_and_extend_solution6. 337: Return code was 0. 337: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/seed_and_extend/solution6.cpp.stdout", "None". 337: Standard output was as expected. 337: Standard error was as expected. 335: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_seed_and_extend_solution4. 336: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_seed_and_extend_solution5. 335: Return code was 0. 335: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/seed_and_extend/solution4.cpp.stdout", "None". 335: Standard output was as expected. 335: Standard error was as expected. 332/411 Test #337: test_demo_tutorial_seed_and_extend_solution6 ...................................... Passed 0.06 sec test 340 Start 340: test_demo_tutorial_sequence_io_example1 340: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sequence_io_example1" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequence_io/example1.cpp.stdout" 340: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 340: Test timeout computed to be: 10000000 336: Return code was 0. 336: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/seed_and_extend/solution5.cpp.stdout", "None". 336: Standard output was as expected. 336: Standard error was as expected. 339: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sequence_io_base. 339: Return code was 0. 339: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequence_io/base.cpp.stdout", "None". 339: Standard output was as expected. 339: Standard error was as expected. 333/411 Test #335: test_demo_tutorial_seed_and_extend_solution4 ...................................... Passed 0.11 sec test 341 Start 341: test_demo_tutorial_sequence_io_solution1 341: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sequence_io_solution1" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequence_io/solution1.cpp.stdout" 341: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 341: Test timeout computed to be: 10000000 338: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_seeds_example1. 334/411 Test #336: test_demo_tutorial_seed_and_extend_solution5 ...................................... Passed 0.10 sec 335/411 Test #339: test_demo_tutorial_sequence_io_base ............................................... Passed 0.07 sec test 342 Start 342: test_demo_tutorial_sequence_io_solution2 342: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sequence_io_solution2" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequence_io/solution2.cpp.stdout" 342: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 342: Test timeout computed to be: 10000000 test 343 Start 343: test_demo_tutorial_sequence_io_solution3 343: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sequence_io_solution3" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequence_io/solution3.cpp.stdout" 343: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 343: Test timeout computed to be: 10000000 338: Return code was 0. 338: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/seeds/example1.cpp.stdout", "None". 338: Standard output was as expected. 338: Standard error was as expected. 340: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sequence_io_example1. 336/411 Test #338: test_demo_tutorial_seeds_example1 ................................................. Passed 0.09 sec test 344 Start 344: test_demo_tutorial_sequence_io_solution4 344: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sequence_io_solution4" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequence_io/solution4.cpp.stdout" 344: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 344: Test timeout computed to be: 10000000 340: Return code was 0. 340: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequence_io/example1.cpp.stdout", "None". 340: Standard output was as expected. 340: Standard error was as expected. 337/411 Test #340: test_demo_tutorial_sequence_io_example1 ........................................... Passed 0.06 sec test 345 Start 345: test_demo_tutorial_sequences_assignment_1_solution 345: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sequences_assignment_1_solution" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequences/assignment_1_solution.cpp.stdout" 345: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 345: Test timeout computed to be: 10000000 342: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sequence_io_solution2. 341: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sequence_io_solution1. 343: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sequence_io_solution3. 342: Return code was 0. 342: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequence_io/solution2.cpp.stdout", "None". 342: Standard output was as expected. 342: Standard error was as expected. 343: Return code was 0. 343: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequence_io/solution3.cpp.stdout", "None". 341: Return code was 0. 341: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequence_io/solution1.cpp.stdout", "None". 341: Standard output was as expected. 341: Standard error was as expected. 338/411 Test #342: test_demo_tutorial_sequence_io_solution2 .......................................... Passed 0.08 sec 343: Standard output was as expected. 343: Standard error was as expected. test 346 Start 346: test_demo_tutorial_sequences_assignment_2_solution 346: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sequences_assignment_2_solution" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequences/assignment_2_solution.cpp.stdout" 346: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 346: Test timeout computed to be: 10000000 339/411 Test #343: test_demo_tutorial_sequence_io_solution3 .......................................... Passed 0.08 sec test 347 Start 347: test_demo_tutorial_sequences_assignment_3_solution 347: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sequences_assignment_3_solution" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequences/assignment_3_solution.cpp.stdout" 347: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 347: Test timeout computed to be: 10000000 344: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sequence_io_solution4. 340/411 Test #341: test_demo_tutorial_sequence_io_solution1 .......................................... Passed 0.10 sec test 348 Start 348: test_demo_tutorial_sequences_assignment_4_solution 348: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sequences_assignment_4_solution" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequences/assignment_4_solution.cpp.stdout" 348: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 348: Test timeout computed to be: 10000000 344: Return code was 0. 344: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequence_io/solution4.cpp.stdout", "None". 344: Standard output was as expected. 344: Standard error was as expected. 345: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sequences_assignment_1_solution. 341/411 Test #344: test_demo_tutorial_sequence_io_solution4 .......................................... Passed 0.10 sec test 349 Start 349: test_demo_tutorial_sequences_assignment_5_solution 349: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sequences_assignment_5_solution" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequences/assignment_5_solution.cpp.stdout" 349: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 349: Test timeout computed to be: 10000000 346: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sequences_assignment_2_solution. 346: Return code was 0. 346: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequences/assignment_2_solution.cpp.stdout", "None". 346: Standard output was as expected. 346: Standard error was as expected. 345: Return code was 0. 345: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequences/assignment_1_solution.cpp.stdout", "None". 345: Standard output was as expected. 345: Standard error was as expected. 347: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sequences_assignment_3_solution. 342/411 Test #345: test_demo_tutorial_sequences_assignment_1_solution ................................ Passed 0.11 sec 347: Return code was 0. 347: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequences/assignment_3_solution.cpp.stdout", "None". 347: Standard output was as expected. 347: Standard error was as expected. test 350 Start 350: test_demo_tutorial_sequences_assignment_6_solution 350: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sequences_assignment_6_solution" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequences/assignment_6_solution.cpp.stdout" 350: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 350: Test timeout computed to be: 10000000 343/411 Test #346: test_demo_tutorial_sequences_assignment_2_solution ................................ Passed 0.07 sec test 351 Start 351: test_demo_tutorial_sequences_example_comparisons 351: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sequences_example_comparisons" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequences/example_comparisons.cpp.stdout" 351: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 351: Test timeout computed to be: 10000000 344/411 Test #347: test_demo_tutorial_sequences_assignment_3_solution ................................ Passed 0.06 sec test 352 Start 352: test_demo_tutorial_sequences_example_conversions_copy 352: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sequences_example_conversions_copy" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequences/example_conversions_copy.cpp.stdout" 352: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 352: Test timeout computed to be: 10000000 348: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sequences_assignment_4_solution. 348: Return code was 0. 348: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequences/assignment_4_solution.cpp.stdout", "None". 348: Standard output was as expected. 348: Standard error was as expected. 349: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sequences_assignment_5_solution. 349: Return code was 0. 349: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequences/assignment_5_solution.cpp.stdout", "None". 349: Standard output was as expected. 349: Standard error was as expected. 345/411 Test #348: test_demo_tutorial_sequences_assignment_4_solution ................................ Passed 0.11 sec test 353 Start 353: test_demo_tutorial_sequences_example_conversions_move 353: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sequences_example_conversions_move" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequences/example_conversions_move.cpp.stdout" 353: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 353: Test timeout computed to be: 10000000 346/411 Test #349: test_demo_tutorial_sequences_assignment_5_solution ................................ Passed 0.09 sec test 354 Start 354: test_demo_tutorial_sequences_example_functionality1 354: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sequences_example_functionality1" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequences/example_functionality1.cpp.stdout" 354: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 354: Test timeout computed to be: 10000000 351: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sequences_example_comparisons. 351: Return code was 0. 351: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequences/example_comparisons.cpp.stdout", "None". 351: Standard output was as expected. 351: Standard error was as expected. 350: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sequences_assignment_6_solution. 350: Return code was 0. 350: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequences/assignment_6_solution.cpp.stdout", "None". 350: Standard output was as expected. 350: Standard error was as expected. 347/411 Test #351: test_demo_tutorial_sequences_example_comparisons .................................. Passed 0.09 sec test 355 Start 355: test_demo_tutorial_sequences_example_functionality2 355: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sequences_example_functionality2" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequences/example_functionality2.cpp.stdout" 355: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 355: Test timeout computed to be: 10000000 352: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sequences_example_conversions_copy. 348/411 Test #350: test_demo_tutorial_sequences_assignment_6_solution ................................ Passed 0.10 sec test 356 Start 356: test_demo_tutorial_sequences_example_segments 356: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sequences_example_segments" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequences/example_segments.cpp.stdout" 356: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 356: Test timeout computed to be: 10000000 352: Return code was 0. 352: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequences/example_conversions_copy.cpp.stdout", "None". 352: Standard output was as expected. 352: Standard error was as expected. 354: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sequences_example_functionality1. 354: Return code was 0. 354: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequences/example_functionality1.cpp.stdout", "None". 354: Standard output was as expected. 354: Standard error was as expected. 349/411 Test #352: test_demo_tutorial_sequences_example_conversions_copy ............................. Passed 0.12 sec 350/411 Test #354: test_demo_tutorial_sequences_example_functionality1 ............................... Passed 0.06 sec test 357 Start 357: test_demo_tutorial_sequences_in_depth_assignment_exact_generous_solution 357: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sequences_in_depth_assignment_exact_generous_solution" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequences_in_depth/assignment_exact_generous_solution.cpp.stdout" 357: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 357: Test timeout computed to be: 10000000 test 358 Start 358: test_demo_tutorial_sequences_in_depth_base 358: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sequences_in_depth_base" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequences_in_depth/base.cpp.stdout" 358: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 358: Test timeout computed to be: 10000000 353: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sequences_example_conversions_move. 353: Return code was 0. 353: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequences/example_conversions_move.cpp.stdout", "None". 353: Standard output was as expected. 353: Standard error was as expected. 355: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sequences_example_functionality2. 356: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sequences_example_segments. 351/411 Test #353: test_demo_tutorial_sequences_example_conversions_move ............................. Passed 0.10 sec test 359 Start 359: test_demo_tutorial_sequences_in_depth_example_overflow 359: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sequences_in_depth_example_overflow" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequences_in_depth/example_overflow.cpp.stdout" 359: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 359: Test timeout computed to be: 10000000 356: Return code was 0. 356: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequences/example_segments.cpp.stdout", "None". 356: Standard output was as expected. 356: Standard error was as expected. 355: Return code was 0. 355: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequences/example_functionality2.cpp.stdout", "None". 355: Standard output was as expected. 355: Standard error was as expected. 352/411 Test #356: test_demo_tutorial_sequences_example_segments ..................................... Passed 0.08 sec test 360 Start 360: test_demo_tutorial_simple_genome_alignment_lagan 360: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_simple_genome_alignment_lagan" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/simple_genome_alignment/lagan.cpp.stdout" 360: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 360: Test timeout computed to be: 10000000 353/411 Test #355: test_demo_tutorial_sequences_example_functionality2 ............................... Passed 0.09 sec test 361 Start 361: test_demo_tutorial_simple_rna_seq_base 361: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_simple_rna_seq_base" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/simple_rna_seq/base.cpp.stdout" 361: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 361: Test timeout computed to be: 10000000 357: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sequences_in_depth_assignment_exact_generous_solution. 358: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sequences_in_depth_base. 358: Return code was 0. 358: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequences_in_depth/base.cpp.stdout", "None". 358: Standard output was as expected. 358: Standard error was as expected. 359: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_sequences_in_depth_example_overflow. 359: Return code was 0. 359: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequences_in_depth/example_overflow.cpp.stdout", "None". 354/411 Test #358: test_demo_tutorial_sequences_in_depth_base ........................................ Passed 0.11 sec test 362 Start 362: test_demo_tutorial_simple_rna_seq_genequant_assignment1 362: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_simple_rna_seq_genequant_assignment1" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/simple_rna_seq/genequant_assignment1.cpp.stdout" 362: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 362: Test timeout computed to be: 10000000 359: Standard output was as expected. 359: Standard error was as expected. 361: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_simple_rna_seq_base. 361: Return code was 0. 355/411 Test #359: test_demo_tutorial_sequences_in_depth_example_overflow ............................ Passed 0.09 sec test 363 Start 363: test_demo_tutorial_simple_rna_seq_genequant_assignment2 363: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_simple_rna_seq_genequant_assignment2" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/simple_rna_seq/genequant_assignment2.cpp.stdout" 363: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 363: Test timeout computed to be: 10000000 361: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/simple_rna_seq/base.cpp.stdout", "None". 361: Standard output was as expected. 361: Standard error was as expected. 360: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_simple_genome_alignment_lagan. 360: Return code was 0. 360: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/simple_genome_alignment/lagan.cpp.stdout", "None". 360: Standard output was as expected. 360: Standard error was as expected. 356/411 Test #361: test_demo_tutorial_simple_rna_seq_base ............................................ Passed 0.09 sec test 364 Start 364: test_demo_tutorial_simple_rna_seq_genequant_assignment3 364: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_simple_rna_seq_genequant_assignment3" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/simple_rna_seq/genequant_assignment3.cpp.stdout" 364: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 364: Test timeout computed to be: 10000000 357/411 Test #360: test_demo_tutorial_simple_genome_alignment_lagan .................................. Passed 0.12 sec test 365 Start 365: test_demo_tutorial_simple_rna_seq_genequant_assignment4 365: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_simple_rna_seq_genequant_assignment4" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/simple_rna_seq/genequant_assignment4.cpp.stdout" 365: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 365: Test timeout computed to be: 10000000 362: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_simple_rna_seq_genequant_assignment1. 363: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_simple_rna_seq_genequant_assignment2. 362: Return code was 0. 362: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/simple_rna_seq/genequant_assignment1.cpp.stdout", "None". 362: Standard output was as expected. 362: Standard error was as expected. 363: Return code was 0. 363: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/simple_rna_seq/genequant_assignment2.cpp.stdout", "None". 363: Standard output was as expected. 358/411 Test #362: test_demo_tutorial_simple_rna_seq_genequant_assignment1 ........................... Passed 0.09 sec test 366 Start 366: test_demo_tutorial_simple_rna_seq_genequant_assignment5 366: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_simple_rna_seq_genequant_assignment5" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/simple_rna_seq/genequant_assignment5.cpp.stdout" 366: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 366: Test timeout computed to be: 10000000 363: Standard error was as expected. 359/411 Test #363: test_demo_tutorial_simple_rna_seq_genequant_assignment2 ........................... Passed 0.10 sec test 367 Start 367: test_demo_tutorial_simple_rna_seq_genequant_solution1 367: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_simple_rna_seq_genequant_solution1" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/simple_rna_seq/genequant_solution1.cpp.stdout" 367: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 367: Test timeout computed to be: 10000000 364: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_simple_rna_seq_genequant_assignment3. 364: Return code was 0. 364: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/simple_rna_seq/genequant_assignment3.cpp.stdout", "None". 364: Standard output was as expected. 364: Standard error was as expected. 365: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_simple_rna_seq_genequant_assignment4. 360/411 Test #364: test_demo_tutorial_simple_rna_seq_genequant_assignment3 ........................... Passed 0.10 sec test 368 Start 368: test_demo_tutorial_simple_rna_seq_genequant_solution2 368: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_simple_rna_seq_genequant_solution2" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/simple_rna_seq/genequant_solution2.cpp.stdout" 368: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 368: Test timeout computed to be: 10000000 365: Return code was 0. 365: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/simple_rna_seq/genequant_assignment4.cpp.stdout", "None". 357: Return code was 0. 357: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/sequences_in_depth/assignment_exact_generous_solution.cpp.stdout", "None". 357: Standard output was as expected. 357: Standard error was as expected. 365: Standard output was as expected. 365: Standard error was as expected. 367: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_simple_rna_seq_genequant_solution1. 367: Return code was 0. 367: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/simple_rna_seq/genequant_solution1.cpp.stdout", "None". 367: Standard output was as expected. 367: Standard error was as expected. 361/411 Test #357: test_demo_tutorial_sequences_in_depth_assignment_exact_generous_solution .......... Passed 0.29 sec test 369 Start 369: test_demo_tutorial_simple_rna_seq_genequant_solution3 369: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_simple_rna_seq_genequant_solution3" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/simple_rna_seq/genequant_solution3.cpp.stdout" 369: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 369: Test timeout computed to be: 10000000 362/411 Test #365: test_demo_tutorial_simple_rna_seq_genequant_assignment4 ........................... Passed 0.12 sec test 370 Start 370: test_demo_tutorial_simple_rna_seq_genequant_solution4 370: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_simple_rna_seq_genequant_solution4" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/simple_rna_seq/genequant_solution4.cpp.stdout" 370: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 370: Test timeout computed to be: 10000000 363/411 Test #367: test_demo_tutorial_simple_rna_seq_genequant_solution1 ............................. Passed 0.08 sec 366: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_simple_rna_seq_genequant_assignment5. test 371 Start 371: test_demo_tutorial_simple_rna_seq_genequant_solution5 371: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_simple_rna_seq_genequant_solution5" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/simple_rna_seq/genequant_solution5.cpp.stdout" 371: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 371: Test timeout computed to be: 10000000 368: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_simple_rna_seq_genequant_solution2. 368: Return code was 0. 368: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/simple_rna_seq/genequant_solution2.cpp.stdout", "None". 368: Standard output was as expected. 368: Standard error was as expected. 366: Return code was 0. 366: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/simple_rna_seq/genequant_assignment5.cpp.stdout", "None". 366: Standard output was as expected. 366: Standard error was as expected. 364/411 Test #368: test_demo_tutorial_simple_rna_seq_genequant_solution2 ............................. Passed 0.08 sec test 372 Start 372: test_demo_tutorial_simple_rna_seq_interval_tree 372: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_simple_rna_seq_interval_tree" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/simple_rna_seq/interval_tree.cpp.stdout" 372: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 372: Test timeout computed to be: 10000000 365/411 Test #366: test_demo_tutorial_simple_rna_seq_genequant_assignment5 ........................... Passed 0.14 sec test 373 Start 373: test_demo_tutorial_string_sets_assignment_1_solution 373: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_string_sets_assignment_1_solution" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/string_sets/assignment_1_solution.cpp.stdout" 373: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 373: Test timeout computed to be: 10000000 370: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_simple_rna_seq_genequant_solution4. 371: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_simple_rna_seq_genequant_solution5. 371: Return code was 0. 371: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/simple_rna_seq/genequant_solution5.cpp.stdout", "None". 371: Standard output was as expected. 371: Standard error was as expected. 370: Return code was 0. 370: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/simple_rna_seq/genequant_solution4.cpp.stdout", "None". 370: Standard output was as expected. 370: Standard error was as expected. 366/411 Test #371: test_demo_tutorial_simple_rna_seq_genequant_solution5 ............................. Passed 0.09 sec test 374 Start 374: test_demo_tutorial_string_sets_assignment_2 374: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_string_sets_assignment_2" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/string_sets/assignment_2.cpp.stdout" 374: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 374: Test timeout computed to be: 10000000 367/411 Test #370: test_demo_tutorial_simple_rna_seq_genequant_solution4 ............................. Passed 0.11 sec test 375 Start 375: test_demo_tutorial_string_sets_assignment_2_solution 375: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_string_sets_assignment_2_solution" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/string_sets/assignment_2_solution.cpp.stdout" 375: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 375: Test timeout computed to be: 10000000 373: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_string_sets_assignment_1_solution. 369: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_simple_rna_seq_genequant_solution3. 372: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_simple_rna_seq_interval_tree. 373: Return code was 0. 373: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/string_sets/assignment_1_solution.cpp.stdout", "None". 373: Standard output was as expected. 373: Standard error was as expected. 372: Return code was 0. 372: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/simple_rna_seq/interval_tree.cpp.stdout", "None". 372: Standard output was as expected. 372: Standard error was as expected. 369: Return code was 0. 369: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/simple_rna_seq/genequant_solution3.cpp.stdout", "None". 369: Standard output was as expected. 369: Standard error was as expected. 368/411 Test #372: test_demo_tutorial_simple_rna_seq_interval_tree ................................... Passed 0.10 sec 369/411 Test #373: test_demo_tutorial_string_sets_assignment_1_solution .............................. Passed 0.09 sec test 376 Start 376: test_demo_tutorial_string_sets_assignment_3_workshop_solution 376: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_string_sets_assignment_3_workshop_solution" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/string_sets/assignment_3_workshop_solution.cpp.stdout" 376: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 376: Test timeout computed to be: 10000000 test 377 Start 377: test_demo_tutorial_string_sets_assignment_4_workshop_solution 377: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_string_sets_assignment_4_workshop_solution" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/string_sets/assignment_4_workshop_solution.cpp.stdout" 377: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 377: Test timeout computed to be: 10000000 374: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_string_sets_assignment_2. 374: Return code was 0. 374: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/string_sets/assignment_2.cpp.stdout", "None". 374: Standard output was as expected. 374: Standard error was as expected. 375: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_string_sets_assignment_2_solution. 375: Return code was 0. 375: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/string_sets/assignment_2_solution.cpp.stdout", "None". 375: Standard output was as expected. 375: Standard error was as expected. 370/411 Test #369: test_demo_tutorial_simple_rna_seq_genequant_solution3 ............................. Passed 0.17 sec test 378 Start 378: test_demo_tutorial_string_sets_example_functionality 378: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_string_sets_example_functionality" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/string_sets/example_functionality.cpp.stdout" 378: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 378: Test timeout computed to be: 10000000 371/411 Test #374: test_demo_tutorial_string_sets_assignment_2 ....................................... Passed 0.06 sec 372/411 Test #375: test_demo_tutorial_string_sets_assignment_2_solution .............................. Passed 0.06 sec test 379 Start 379: test_demo_tutorial_string_sets_example_functionality_2 379: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_string_sets_example_functionality_2" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/string_sets/example_functionality_2.cpp.stdout" 379: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 379: Test timeout computed to be: 10000000 test 380 Start 380: test_demo_tutorial_string_sets_example_iterators 380: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_string_sets_example_iterators" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/string_sets/example_iterators.cpp.stdout" 380: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 380: Test timeout computed to be: 10000000 379: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_string_sets_example_functionality_2. 379: Return code was 0. 379: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/string_sets/example_functionality_2.cpp.stdout", "None". 379: Standard output was as expected. 379: Standard error was as expected. 377: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_string_sets_assignment_4_workshop_solution. 373/411 Test #379: test_demo_tutorial_string_sets_example_functionality_2 ............................ Passed 0.07 sec test 381 Start 381: test_demo_tutorial_vcf_io_base 381: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_vcf_io_base" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/vcf_io/base.cpp.stdout" 381: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 381: Test timeout computed to be: 10000000 376: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_string_sets_assignment_3_workshop_solution. 376: Return code was 0. 376: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/string_sets/assignment_3_workshop_solution.cpp.stdout", "None". 377: Return code was 0. 377: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/string_sets/assignment_4_workshop_solution.cpp.stdout", "None". 377: Standard output was as expected. 377: Standard error was as expected. 376: Standard output was as expected. 376: Standard error was as expected. 378: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_string_sets_example_functionality. 374/411 Test #376: test_demo_tutorial_string_sets_assignment_3_workshop_solution ..................... Passed 0.11 sec test 382 Start 382: test_demo_tutorial_vcf_io_example1 382: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_vcf_io_example1" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/vcf_io/example1.cpp.stdout" 382: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 382: Test timeout computed to be: 10000000 378: Return code was 0. 378: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/string_sets/example_functionality.cpp.stdout", "None". 378: Standard output was as expected. 378: Standard error was as expected. 375/411 Test #377: test_demo_tutorial_string_sets_assignment_4_workshop_solution ..................... Passed 0.11 sec test 383 Start 383: test_demo_tutorial_vcf_io_solution1 383: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_vcf_io_solution1" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/vcf_io/solution1.cpp.stdout" 383: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 383: Test timeout computed to be: 10000000 376/411 Test #378: test_demo_tutorial_string_sets_example_functionality .............................. Passed 0.12 sec test 384 Start 384: test_demo_tutorial_vcf_io_solution2 384: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_vcf_io_solution2" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/vcf_io/solution2.cpp.stdout" 384: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 384: Test timeout computed to be: 10000000 380: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_string_sets_example_iterators. 380: Return code was 0. 380: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/string_sets/example_iterators.cpp.stdout", "None". 380: Standard output was as expected. 380: Standard error was as expected. 381: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_vcf_io_base. 381: Return code was 0. 381: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/vcf_io/base.cpp.stdout", "None". 381: Standard output was as expected. 381: Standard error was as expected. 377/411 Test #381: test_demo_tutorial_vcf_io_base .................................................... Passed 0.06 sec test 385 Start 385: test_demo_tutorial_vcf_io_solution3 385: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/util/bin/demo_checker.py" "--binary-path" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_vcf_io_solution3" "--stdout-path" "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/vcf_io/solution3.cpp.stdout" 385: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/demos 385: Test timeout computed to be: 10000000 378/411 Test #380: test_demo_tutorial_string_sets_example_iterators .................................. Passed 0.13 sec test 386 Start 386: app_test_bs_tools 386: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/apps/bs_tools/tests/run_tests.py" "/build/reproducible-path/seqan2-2.5.2" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu" 386: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/bs_tools 386: Test timeout computed to be: 10000000 383: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_vcf_io_solution1. 383: Return code was 0. 383: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/vcf_io/solution1.cpp.stdout", "None". 383: Standard output was as expected. 383: Standard error was as expected. 379/411 Test #383: test_demo_tutorial_vcf_io_solution1 ............................................... Passed 0.07 sec test 387 Start 387: app_test_dfi 387: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/apps/dfi/tests/run_tests.py" "/build/reproducible-path/seqan2-2.5.2" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu" 387: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/dfi 387: Test timeout computed to be: 10000000 382: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_vcf_io_example1. 382: Return code was 0. 382: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/vcf_io/example1.cpp.stdout", "None". 382: Standard output was as expected. 382: Standard error was as expected. 384: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_vcf_io_solution2. 384: Return code was 0. 384: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/vcf_io/solution2.cpp.stdout", "None". 380/411 Test #382: test_demo_tutorial_vcf_io_example1 ................................................ Passed 0.13 sec 384: Standard output was as expected. 384: Standard error was as expected. test 388 Start 388: app_test_fiona 388: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/apps/fiona/tests/run_tests.py" "/build/reproducible-path/seqan2-2.5.2" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu" 388: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/fiona 388: Test timeout computed to be: 10000000 385: Running /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/demo_tutorial_vcf_io_solution3. 381/411 Test #384: test_demo_tutorial_vcf_io_solution2 ............................................... Passed 0.12 sec test 389 Start 389: app_test_gustaf 389: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/apps/gustaf/tests/run_tests.py" "/build/reproducible-path/seqan2-2.5.2" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu" 389: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/gustaf 389: Test timeout computed to be: 10000000 385: Return code was 0. 385: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/tutorial/vcf_io/solution3.cpp.stdout", "None". 385: Standard output was as expected. 385: Standard error was as expected. 382/411 Test #385: test_demo_tutorial_vcf_io_solution3 ............................................... Passed 0.13 sec test 390 Start 390: app_test_insegt 390: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/apps/insegt/tests/run_tests.py" "/build/reproducible-path/seqan2-2.5.2" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu" 390: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/insegt 390: Test timeout computed to be: 10000000 390: DELETING TEMP DIR /tmp/tmp7w312sfj 390: Executing test for insegt 390: ========================= 390: 390: insegt -ro /tmp/tmp7w312sfj/default_readOutput.gff -ao /tmp/tmp7w312sfj/default_annoOutput.gff -to /tmp/tmp7w312sfj/default_tupleOutput.gff /build/reproducible-path/seqan2-2.5.2/apps/insegt/tests/alignments.sam /build/reproducible-path/seqan2-2.5.2/apps/insegt/tests/annotations.gff OK 390: insegt -c 2 -ro /tmp/tmp7w312sfj/threshold-count2_readOutput.gff -ao /tmp/tmp7w312sfj/threshold-count2_annoOutput.gff -to /tmp/tmp7w312sfj/threshold-count2_tupleOutput.gff /build/reproducible-path/seqan2-2.5.2/apps/insegt/tests/alignments.sam /build/reproducible-path/seqan2-2.5.2/apps/insegt/tests/annotations.gff OK 390: insegt -n 3 -ro /tmp/tmp7w312sfj/ntuple3_readOutput.gff -ao /tmp/tmp7w312sfj/ntuple3_annoOutput.gff -to /tmp/tmp7w312sfj/ntuple3_tupleOutput.gff /build/reproducible-path/seqan2-2.5.2/apps/insegt/tests/alignments.sam /build/reproducible-path/seqan2-2.5.2/apps/insegt/tests/annotations.gff OK 390: insegt -m -ro /tmp/tmp7w312sfj/max-tuple_readOutput.gff -ao /tmp/tmp7w312sfj/max-tuple_annoOutput.gff -to /tmp/tmp7w312sfj/max-tuple_tupleOutput.gff /build/reproducible-path/seqan2-2.5.2/apps/insegt/tests/alignments.sam /build/reproducible-path/seqan2-2.5.2/apps/insegt/tests/annotations.gff OK 390: insegt -e -ro /tmp/tmp7w312sfj/exact-ntuple_readOutput.gff -ao /tmp/tmp7w312sfj/exact-ntuple_annoOutput.gff -to /tmp/tmp7w312sfj/exact-ntuple_tupleOutput.gff /build/reproducible-path/seqan2-2.5.2/apps/insegt/tests/alignments.sam /build/reproducible-path/seqan2-2.5.2/apps/insegt/tests/annotations.gff OK 390: ============================== 390: total tests: 5 390: failed tests: 0 390: successful tests: 5 390: ============================== 383/411 Test #390: app_test_insegt ................................................................... Passed 0.16 sec test 391 Start 391: app_test_mason2 391: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/apps/mason2/tests/run_tests.py" "/build/reproducible-path/seqan2-2.5.2" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu" 391: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/mason2 391: Test timeout computed to be: 10000000 389: DELETING TEMP DIR /tmp/tmpqhbpw8qc 389: Executing test for gustaf 389: =============================== 389: 389: gustaf /build/reproducible-path/seqan2-2.5.2/apps/gustaf/tests/adeno_modified_reads_mates1.fa /build/reproducible-path/seqan2-2.5.2/apps/gustaf/tests/adeno_modified_reads_mates2.fa -o /tmp/tmpqhbpw8qc/adeno_modified_reads_joinedMates.fa -rc OK 389: gustaf /build/reproducible-path/seqan2-2.5.2/apps/gustaf/tests/reads_simulated_mates1_gold.fa /build/reproducible-path/seqan2-2.5.2/apps/gustaf/tests/reads_simulated_mates2_gold.fa -o /tmp/tmpqhbpw8qc/reads_simulated_joined_rc.fa -rc OK 389: gustaf /build/reproducible-path/seqan2-2.5.2/apps/gustaf/tests/reads_simulated_mates1_gold.fa /build/reproducible-path/seqan2-2.5.2/apps/gustaf/tests/reads_simulated_mates2_gold.fa -o /tmp/tmpqhbpw8qc/reads_simulated_joined.fa OK 389: gustaf /build/reproducible-path/seqan2-2.5.2/apps/gustaf/tests/reads_simulated_joined_gold.fa -o /tmp/tmpqhbpw8qc/reads_simulated_mates1_rc.fa -o /tmp/tmpqhbpw8qc/reads_simulated_mates2_rc.fa -rc OK 389: gustaf /build/reproducible-path/seqan2-2.5.2/apps/gustaf/tests/reads_simulated_joined_gold.fa -o /tmp/tmpqhbpw8qc/reads_simulated_mates1.fa -o /tmp/tmpqhbpw8qc/reads_simulated_mates2.fa OK 389: gustaf /build/reproducible-path/seqan2-2.5.2/apps/gustaf/tests/adeno.fa /build/reproducible-path/seqan2-2.5.2/apps/gustaf/tests/adeno_modified_reads.fa -gff /tmp/tmpqhbpw8qc/st2_l100.gff -vcf /tmp/tmpqhbpw8qc/st2_l100.vcf OK 389: gustaf /build/reproducible-path/seqan2-2.5.2/apps/gustaf/tests/adeno.fa /build/reproducible-path/seqan2-2.5.2/apps/gustaf/tests/adeno_modified_reads.fa -gff /tmp/tmpqhbpw8qc/st1_l30.gff -vcf /tmp/tmpqhbpw8qc/st1_l30.vcf -st 1 -l 30 OK 389: gustaf /build/reproducible-path/seqan2-2.5.2/apps/gustaf/tests/adeno.fa /build/reproducible-path/seqan2-2.5.2/apps/gustaf/tests/adeno_modified_reads.fa -m /build/reproducible-path/seqan2-2.5.2/apps/gustaf/tests/stellar.gff -gff /tmp/tmpqhbpw8qc/st1_l30_m.gff -vcf /tmp/tmpqhbpw8qc/st1_l30_m.vcf -st 1 OK 389: gustaf /build/reproducible-path/seqan2-2.5.2/apps/gustaf/tests/adeno.fa /build/reproducible-path/seqan2-2.5.2/apps/gustaf/tests/adeno_modified_reads.fa -gff /tmp/tmpqhbpw8qc/st1_l30_ith5.gff -vcf /tmp/tmpqhbpw8qc/st1_l30_ith5.vcf -st 1 -l 30 -ith 5 -bth 5 OK 389: gustaf /build/reproducible-path/seqan2-2.5.2/apps/gustaf/tests/adeno.fa /build/reproducible-path/seqan2-2.5.2/apps/gustaf/tests/adeno_modified_reads.fa -gff /tmp/tmpqhbpw8qc/st1_l30_gth3.gff -vcf /tmp/tmpqhbpw8qc/st1_l30_gth3.vcf -st 1 -l 30 -gth 3 OK 389: gustaf /build/reproducible-path/seqan2-2.5.2/apps/gustaf/tests/adeno.fa /build/reproducible-path/seqan2-2.5.2/apps/gustaf/tests/adeno_modified_reads_mates1.fa /build/reproducible-path/seqan2-2.5.2/apps/gustaf/tests/adeno_modified_reads_mates2.fa -m /build/reproducible-path/seqan2-2.5.2/apps/gustaf/tests/stellar_joinedMates_l30.gff -gff /tmp/tmpqhbpw8qc/pairedEnd_st1_l30.gff -vcf /tmp/tmpqhbpw8qc/pairedEnd_st1_l30.vcf -st 1 -mst 1 -ll 1000 -le 100 -rc OK 389: gustaf /build/reproducible-path/seqan2-2.5.2/apps/gustaf/tests/adeno.fa /build/reproducible-path/seqan2-2.5.2/apps/gustaf/tests/read_reference2.fa -gff /tmp/tmpqhbpw8qc/reference2_st1_l30.gff -vcf /tmp/tmpqhbpw8qc/reference2_st1_l30.vcf -st 1 -l 30 OK 389: ============================== 389: total tests: 12 389: failed tests: 0 389: successful tests: 12 389: ============================== 384/411 Test #389: app_test_gustaf ................................................................... Passed 0.23 sec test 392 Start 392: app_test_micro_razers 392: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/apps/micro_razers/tests/run_tests.py" "/build/reproducible-path/seqan2-2.5.2" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu" 392: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/micro_razers 392: Test timeout computed to be: 10000000 67: test_journaled_string_tree_find_shiftor OK 391: DELETING TEMP DIR /tmp/tmph_pyv47q 391: Executing test for mason_variator 391: ====================== 391: 391: Detecting Standard Library 391: Platform: Linux 391: Standard Library: libstdc++ 391: 391: mason_genome -l 1000 -o /tmp/tmph_pyv47q/genome.test1.fasta OK 391: mason_genome -s 1 -l 1000 -l 100 -o /tmp/tmph_pyv47q/genome.test2.fasta OK 391: mason_methylation --seed 33 -i /build/reproducible-path/seqan2-2.5.2/apps/mason2/tests/libstdc++/../input/random.fasta -o /tmp/tmph_pyv47q/random_meth1.fasta OK 391: mason_variator -ir /build/reproducible-path/seqan2-2.5.2/apps/mason2/tests/libstdc++/../input/random.fasta -n 2 -ov /tmp/tmph_pyv47q/random_var1.vcf -of /tmp/tmph_pyv47q/random_var1.fasta --snp-rate 0.001 --small-indel-rate 0.001 --sv-indel-rate 0.001 --sv-inversion-rate 0.001 --sv-translocation-rate 0.001 --sv-duplication-rate 0.001 --min-sv-size 50 --max-sv-size 100 --methylation-levels --meth-fasta-out /tmp/tmph_pyv47q/random_var1_meth.fasta --out-breakpoints /tmp/tmph_pyv47q/random_var1_bp.txt OK 391: mason_variator -ir /build/reproducible-path/seqan2-2.5.2/apps/mason2/tests/libstdc++/../input/random.fasta -n 2 -ov /tmp/tmph_pyv47q/random_var2.vcf -of /tmp/tmph_pyv47q/random_var2.fasta --snp-rate 0.001 --small-indel-rate 0.001 --sv-indel-rate 0.001 --sv-inversion-rate 0.001 --sv-translocation-rate 0.001 --sv-duplication-rate 0.001 --min-sv-size 50 --max-sv-size 100 --methylation-levels --meth-fasta-in /build/reproducible-path/seqan2-2.5.2/apps/mason2/tests/libstdc++/random_meth1.fasta --meth-fasta-out /tmp/tmph_pyv47q/random_var2_meth.fasta --out-breakpoints /tmp/tmph_pyv47q/random_var2_bp.txt OK 391: mason_variator -ir /build/reproducible-path/seqan2-2.5.2/apps/mason2/tests/libstdc++/../input/random.fasta -n 2 -ov /tmp/tmph_pyv47q/random_var3.vcf -of /tmp/tmph_pyv47q/random_var3.fasta --snp-rate 0.001 --small-indel-rate 0.001 --sv-indel-rate 0.001 --sv-inversion-rate 0.001 --sv-translocation-rate 0.001 --sv-duplication-rate 0.001 --min-sv-size 50 --max-sv-size 100 --out-breakpoints /tmp/tmph_pyv47q/random_var3_bp.txt OK 391: mason_variator -ir /build/reproducible-path/seqan2-2.5.2/apps/mason2/tests/libstdc++/../input/adeno_virus.fa -ov /tmp/tmph_pyv47q/random_var9.vcf -of /tmp/tmph_pyv47q/random_var9.fasta --sv-indel-rate 0.01 --sv-duplication-rate 0.01 --sv-inversion-rate 0.01 --min-sv-size 20 --max-sv-size 300 OK 391: mason_materializer -ir /build/reproducible-path/seqan2-2.5.2/apps/mason2/tests/libstdc++/../input/random.fasta -iv /build/reproducible-path/seqan2-2.5.2/apps/mason2/tests/libstdc++/random_var1.vcf -o /tmp/tmph_pyv47q/materializer.random_var1.fasta OK 391: mason_materializer -ir /build/reproducible-path/seqan2-2.5.2/apps/mason2/tests/libstdc++/../input/random.fasta -iv /build/reproducible-path/seqan2-2.5.2/apps/mason2/tests/libstdc++/random_var2.vcf -o /tmp/tmph_pyv47q/materializer.random_var2.fasta --meth-fasta-in /build/reproducible-path/seqan2-2.5.2/apps/mason2/tests/libstdc++/random_meth1.fasta --meth-fasta-out /tmp/tmph_pyv47q/materializer.random_meth2.fasta OK 391: mason_simulator -n 1000 -ir /build/reproducible-path/seqan2-2.5.2/apps/mason2/tests/libstdc++/../input/random.fasta -o /tmp/tmph_pyv47q/simulator.left1.fq -or /tmp/tmph_pyv47q/simulator.right1.fq -oa /tmp/tmph_pyv47q/simulator.out1.sam OK 391: mason_simulator -n 1000 -ir /build/reproducible-path/seqan2-2.5.2/apps/mason2/tests/libstdc++/../input/random.fasta -iv /build/reproducible-path/seqan2-2.5.2/apps/mason2/tests/libstdc++/random_var1.vcf -o /tmp/tmph_pyv47q/simulator.left2.fq -or /tmp/tmph_pyv47q/simulator.right2.fq -oa /tmp/tmph_pyv47q/simulator.out2.sam OK 391: mason_simulator -n 1000 -ir /build/reproducible-path/seqan2-2.5.2/apps/mason2/tests/libstdc++/../input/random.fasta -o /tmp/tmph_pyv47q/simulator.left3.fa -or /tmp/tmph_pyv47q/simulator.right3.fa OK 391: mason_simulator -n 1000 -ir /build/reproducible-path/seqan2-2.5.2/apps/mason2/tests/libstdc++/../input/random.fasta -iv /build/reproducible-path/seqan2-2.5.2/apps/mason2/tests/libstdc++/random_var1.vcf -o /tmp/tmph_pyv47q/simulator.left7.fa -oa /tmp/tmph_pyv47q/simulator.out7.sam OK 391: mason_simulator -n 1000 -ir /build/reproducible-path/seqan2-2.5.2/apps/mason2/tests/libstdc++/../input/random.fasta -o /tmp/tmph_pyv47q/simulator.left4.fa -oa /tmp/tmph_pyv47q/simulator.out4.sam OK 391: mason_simulator -n 1000 -ir /build/reproducible-path/seqan2-2.5.2/apps/mason2/tests/libstdc++/../input/random.fasta --meth-fasta-in /build/reproducible-path/seqan2-2.5.2/apps/mason2/tests/libstdc++/random_meth1.fasta --methylation-levels --enable-bs-seq -o /tmp/tmph_pyv47q/simulator.left5.fq -or /tmp/tmph_pyv47q/simulator.right5.fq OK 391: mason_simulator -n 1000 -ir /build/reproducible-path/seqan2-2.5.2/apps/mason2/tests/libstdc++/../input/random.fasta -iv /build/reproducible-path/seqan2-2.5.2/apps/mason2/tests/libstdc++/random_var1.vcf --meth-fasta-in /build/reproducible-path/seqan2-2.5.2/apps/mason2/tests/libstdc++/random_meth1.fasta --methylation-levels --enable-bs-seq -o /tmp/tmph_pyv47q/simulator.left6.fq -or /tmp/tmph_pyv47q/simulator.right6.fq OK 391: mason_simulator --seq-technology 454 --fragment-mean-size 800 --454-read-length-mean 200 --454-read-length-stddev 20 -n 1000 -v -ir /build/reproducible-path/seqan2-2.5.2/apps/mason2/tests/libstdc++/../input/random.fasta -o /tmp/tmph_pyv47q/simulator.left8.fq -oa /tmp/tmph_pyv47q/simulator.out8.sam OK 391: ============================== 391: total tests: 17 391: failed tests: 0 391: successful tests: 17 391: ============================== 385/411 Test #391: app_test_mason2 ................................................................... Passed 1.67 sec test 393 Start 393: app_test_ngs_roi 393: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/tests/run_tests.py" "/build/reproducible-path/seqan2-2.5.2" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu" 393: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/ngs_roi 393: Test timeout computed to be: 10000000 393: DELETING TEMP DIR /tmp/tmpzr_ckaij 393: Executing test for roi_intersect 393: ================================ 393: 393: roi_feature_projection -m projection -ss -ir /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/tests/small.roi -if /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/tests/small.bed -or /tmp/tmpzr_ckaij/out_small_bed_mprojection_ss.roi OK 393: roi_feature_projection -m projection -ir /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/tests/small.roi -if /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/tests/small.bed -or /tmp/tmpzr_ckaij/out_small_bed_mprojection.roi OK 393: roi_feature_projection -m projection -ss -ir /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/tests/small.roi -if /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/tests/small.gff -or /tmp/tmpzr_ckaij/out_small_gff_mprojection_ss.roi OK 393: roi_feature_projection -m projection -ir /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/tests/small.roi -if /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/tests/small.gff -or /tmp/tmpzr_ckaij/out_small_gff_mprojection.roi OK 393: roi_feature_projection -m projection -ss -ir /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/tests/small.roi -if /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/tests/small.gtf -or /tmp/tmpzr_ckaij/out_small_gtf_mprojection_ss.roi OK 393: roi_feature_projection -m projection -ir /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/tests/small.roi -if /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/tests/small.gtf -or /tmp/tmpzr_ckaij/out_small_gtf_mprojection.roi OK 393: roi_feature_projection -m union -ss -ir /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/tests/small.roi -if /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/tests/small.bed -or /tmp/tmpzr_ckaij/out_small_bed_munion_ss.roi OK 393: roi_feature_projection -m union -ir /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/tests/small.roi -if /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/tests/small.bed -or /tmp/tmpzr_ckaij/out_small_bed_munion.roi OK 393: roi_feature_projection -m union -ss -ir /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/tests/small.roi -if /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/tests/small.gff -or /tmp/tmpzr_ckaij/out_small_gff_munion_ss.roi OK 393: roi_feature_projection -m union -ir /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/tests/small.roi -if /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/tests/small.gff -or /tmp/tmpzr_ckaij/out_small_gff_munion.roi OK 393: roi_feature_projection -m union -ss -ir /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/tests/small.roi -if /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/tests/small.gtf -or /tmp/tmpzr_ckaij/out_small_gtf_munion_ss.roi OK 393: roi_feature_projection -m union -ir /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/tests/small.roi -if /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/tests/small.gtf -or /tmp/tmpzr_ckaij/out_small_gtf_munion.roi OK 393: roi_feature_projection -m difference -ss -ir /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/tests/small.roi -if /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/tests/small.bed -or /tmp/tmpzr_ckaij/out_small_bed_mdifference_ss.roi OK 393: roi_feature_projection -m difference -ir /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/tests/small.roi -if /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/tests/small.bed -or /tmp/tmpzr_ckaij/out_small_bed_mdifference.roi OK 393: roi_feature_projection -m difference -ss -ir /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/tests/small.roi -if /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/tests/small.gff -or /tmp/tmpzr_ckaij/out_small_gff_mdifference_ss.roi OK 393: roi_feature_projection -m difference -ir /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/tests/small.roi -if /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/tests/small.gff -or /tmp/tmpzr_ckaij/out_small_gff_mdifference.roi OK 393: roi_feature_projection -m difference -ss -ir /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/tests/small.roi -if /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/tests/small.gtf -or /tmp/tmpzr_ckaij/out_small_gtf_mdifference_ss.roi OK 393: roi_feature_projection -m difference -ir /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/tests/small.roi -if /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/tests/small.gtf -or /tmp/tmpzr_ckaij/out_small_gtf_mdifference.roi OK 393: roi_feature_projection -m intersection -ss -ir /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/tests/small.roi -if /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/tests/small.bed -or /tmp/tmpzr_ckaij/out_small_bed_mintersection_ss.roi OK 393: roi_feature_projection -m intersection -ir /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/tests/small.roi -if /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/tests/small.bed -or /tmp/tmpzr_ckaij/out_small_bed_mintersection.roi OK 393: roi_feature_projection -m intersection -ss -ir /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/tests/small.roi -if /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/tests/small.gff -or /tmp/tmpzr_ckaij/out_small_gff_mintersection_ss.roi OK 393: roi_feature_projection -m intersection -ir /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/tests/small.roi -if /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/tests/small.gff -or /tmp/tmpzr_ckaij/out_small_gff_mintersection.roi OK 393: roi_feature_projection -m intersection -ss -ir /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/tests/small.roi -if /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/tests/small.gtf -or /tmp/tmpzr_ckaij/out_small_gtf_mintersection_ss.roi OK 393: roi_feature_projection -m intersection -ir /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/tests/small.roi -if /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/tests/small.gtf -or /tmp/tmpzr_ckaij/out_small_gtf_mintersection.roi OK 393: bam2roi --strand-specific -if /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/tests/micro_rna_sorted_2l.bam -of /tmp/tmpzr_ckaij/out_mrna_2l_ss.roi OK 393: bam2roi -if /build/reproducible-path/seqan2-2.5.2/apps/ngs_roi/tests/micro_rna_sorted_2l.bam -of /tmp/tmpzr_ckaij/out_mrna_2l.roi OK 393: ============================== 393: total tests: 26 393: failed tests: 0 393: successful tests: 26 393: ============================== 386/411 Test #393: app_test_ngs_roi .................................................................. Passed 0.31 sec test 394 Start 394: app_test_pair_align 394: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/run_tests.py" "/build/reproducible-path/seqan2-2.5.2" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu" 394: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/pair_align 394: Test timeout computed to be: 10000000 394: Executing test for pair_align 394: ============================= 394: 394: pair_align -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/1aab.fa -o /tmp/tmp2cioa317/1aab.fa OK 394: pair_align -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/1ad2.fa -o /tmp/tmp2cioa317/1ad2.fa OK 394: pair_align -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/2trx.fa -o /tmp/tmp2cioa317/2trx.fa OK 394: pair_align -a protein -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/1aab.fa -o /tmp/tmp2cioa317/1aab.protein.fa OK 394: pair_align -a protein -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/1ad2.fa -o /tmp/tmp2cioa317/1ad2.protein.fa OK 394: pair_align -a protein -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/2trx.fa -o /tmp/tmp2cioa317/2trx.protein.fa OK 394: pair_align -m nw -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/1aab.fa -o /tmp/tmp2cioa317/1aab.mnw.fa OK 394: pair_align -m gotoh -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/1aab.fa -o /tmp/tmp2cioa317/1aab.mgotoh.fa OK 394: pair_align -m sw -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/1aab.fa -o /tmp/tmp2cioa317/1aab.msw.fa OK 394: pair_align -m lcs -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/1aab.fa -o /tmp/tmp2cioa317/1aab.mlcs.fa OK 394: pair_align -m nw -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/1ad2.fa -o /tmp/tmp2cioa317/1ad2.mnw.fa OK 394: pair_align -m gotoh -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/1ad2.fa -o /tmp/tmp2cioa317/1ad2.mgotoh.fa OK 394: pair_align -m sw -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/1ad2.fa -o /tmp/tmp2cioa317/1ad2.msw.fa OK 394: pair_align -m lcs -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/1ad2.fa -o /tmp/tmp2cioa317/1ad2.mlcs.fa OK 394: pair_align -m nw -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/2trx.fa -o /tmp/tmp2cioa317/2trx.mnw.fa OK 394: pair_align -m gotoh -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/2trx.fa -o /tmp/tmp2cioa317/2trx.mgotoh.fa OK 394: pair_align -m sw -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/2trx.fa -o /tmp/tmp2cioa317/2trx.msw.fa OK 394: pair_align -m lcs -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/2trx.fa -o /tmp/tmp2cioa317/2trx.mlcs.fa OK 394: pair_align -g -20 -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/1aab.fa -o /tmp/tmp2cioa317/1aab.g-20.fa OK 394: pair_align -e -5 -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/1aab.fa -o /tmp/tmp2cioa317/1aab.e-5.fa OK 394: pair_align -ms 10 -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/1aab.fa -o /tmp/tmp2cioa317/1aab.ms10.fa OK 394: pair_align -mm -8 -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/1aab.fa -o /tmp/tmp2cioa317/1aab.mm-8.fa OK 394: pair_align -g -20 -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/1ad2.fa -o /tmp/tmp2cioa317/1ad2.g-20.fa OK 394: pair_align -e -5 -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/1ad2.fa -o /tmp/tmp2cioa317/1ad2.e-5.fa OK 394: pair_align -ms 10 -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/1ad2.fa -o /tmp/tmp2cioa317/1ad2.ms10.fa OK 394: pair_align -mm -8 -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/1ad2.fa -o /tmp/tmp2cioa317/1ad2.mm-8.fa OK 394: pair_align -g -20 -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/2trx.fa -o /tmp/tmp2cioa317/2trx.g-20.fa OK 394: pair_align -e -5 -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/2trx.fa -o /tmp/tmp2cioa317/2trx.e-5.fa OK 394: pair_align -ms 10 -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/2trx.fa -o /tmp/tmp2cioa317/2trx.ms10.fa OK 394: pair_align -mm -8 -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/2trx.fa -o /tmp/tmp2cioa317/2trx.mm-8.fa OK 394: pair_align -ma /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/VTML200I -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/1aab.fa -o /tmp/tmp2cioa317/1aab.maVTML200.fa OK 394: pair_align -ma /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/VTML200I -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/1ad2.fa -o /tmp/tmp2cioa317/1ad2.maVTML200.fa OK 394: pair_align -ma /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/VTML200I -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/2trx.fa -o /tmp/tmp2cioa317/2trx.maVTML200.fa OK 394: pair_align -lo 5 -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/1aab.fa -o /tmp/tmp2cioa317/1aab.lo5.fa OK 394: pair_align -hi 5 -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/1aab.fa -o /tmp/tmp2cioa317/1aab.hi5.fa OK 394: pair_align -lo 5 -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/1ad2.fa -o /tmp/tmp2cioa317/1ad2.lo5.fa OK 394: pair_align -hi 5 -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/1ad2.fa -o /tmp/tmp2cioa317/1ad2.hi5.fa OK 394: pair_align -lo 5 -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/2trx.fa -o /tmp/tmp2cioa317/2trx.lo5.fa OK 394: pair_align -hi 5 -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/2trx.fa -o /tmp/tmp2cioa317/2trx.hi5.fa OK 394: pair_align -c ffff -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/1aab.fa -o /tmp/tmp2cioa317/1aab.cffff.fa OK 394: pair_align -c tttt -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/1aab.fa -o /tmp/tmp2cioa317/1aab.ctttt.fa OK 394: pair_align -c ffft -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/1aab.fa -o /tmp/tmp2cioa317/1aab.cffft.fa OK 394: pair_align -c fftf -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/1aab.fa -o /tmp/tmp2cioa317/1aab.cfftf.fa OK 394: pair_align -c ftff -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/1aab.fa -o /tmp/tmp2cioa317/1aab.cftff.fa OK 394: pair_align -c tfff -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/1aab.fa -o /tmp/tmp2cioa317/1aab.ctfff.fa OK 394: pair_align -c fftt -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/1aab.fa -o /tmp/tmp2cioa317/1aab.cfftt.fa OK 394: pair_align -c fttf -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/1aab.fa -o /tmp/tmp2cioa317/1aab.cfttf.fa OK 394: pair_align -c ttff -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/1aab.fa -o /tmp/tmp2cioa317/1aab.cttff.fa OK 394: pair_align -c tfft -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/1aab.fa -o /tmp/tmp2cioa317/1aab.ctfft.fa OK 394: pair_align -c ffff -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/1ad2.fa -o /tmp/tmp2cioa317/1ad2.cffff.fa OK 394: pair_align -c tttt -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/1ad2.fa -o /tmp/tmp2cioa317/1ad2.ctttt.fa OK 394: pair_align -c ffft -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/1ad2.fa -o /tmp/tmp2cioa317/1ad2.cffft.fa OK 394: pair_align -c fftf -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/1ad2.fa -o /tmp/tmp2cioa317/1ad2.cfftf.fa OK 394: pair_align -c ftff -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/1ad2.fa -o /tmp/tmp2cioa317/1ad2.cftff.fa OK 394: pair_align -c tfff -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/1ad2.fa -o /tmp/tmp2cioa317/1ad2.ctfff.fa OK 394: pair_align -c fftt -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/1ad2.fa -o /tmp/tmp2cioa317/1ad2.cfftt.fa OK 394: pair_align -c fttf -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/1ad2.fa -o /tmp/tmp2cioa317/1ad2.cfttf.fa OK 394: pair_align -c ttff -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/1ad2.fa -o /tmp/tmp2cioa317/1ad2.cttff.fa OK 394: pair_align -c tfft -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/1ad2.fa -o /tmp/tmp2cioa317/1ad2.ctfft.fa OK 394: pair_align -c ffff -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/2trx.fa -o /tmp/tmp2cioa317/2trx.cffff.fa OK 394: pair_align -c tttt -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/2trx.fa -o /tmp/tmp2cioa317/2trx.ctttt.fa OK 394: pair_align -c ffft -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/2trx.fa -o /tmp/tmp2cioa317/2trx.cffft.fa OK 394: pair_align -c fftf -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/2trx.fa -o /tmp/tmp2cioa317/2trx.cfftf.fa OK 394: pair_align -c ftff -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/2trx.fa -o /tmp/tmp2cioa317/2trx.cftff.faDELETING TEMP DIR /tmp/tmp2cioa317 394: OK 394: pair_align -c tfff -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/2trx.fa -o /tmp/tmp2cioa317/2trx.ctfff.fa OK 394: pair_align -c fftt -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/2trx.fa -o /tmp/tmp2cioa317/2trx.cfftt.fa OK 394: pair_align -c fttf -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/2trx.fa -o /tmp/tmp2cioa317/2trx.cfttf.fa OK 394: pair_align -c ttff -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/2trx.fa -o /tmp/tmp2cioa317/2trx.cttff.fa OK 394: pair_align -c tfft -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/2trx.fa -o /tmp/tmp2cioa317/2trx.ctfft.fa OK 394: pair_align -a dna -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/adeno1.fa -o /tmp/tmp2cioa317/adeno1.fa OK 394: pair_align -a dna -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/adeno2.fa -o /tmp/tmp2cioa317/adeno2.fa OK 394: pair_align -a dna -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/adeno3.fa -o /tmp/tmp2cioa317/adeno3.fa OK 394: pair_align -a rna -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/adeno1-rna.fa -o /tmp/tmp2cioa317/adeno1-rna.fa OK 394: pair_align -a rna -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/adeno2-rna.fa -o /tmp/tmp2cioa317/adeno2-rna.fa OK 394: pair_align -a rna -s /build/reproducible-path/seqan2-2.5.2/apps/pair_align/tests/adeno3-rna.fa -o /tmp/tmp2cioa317/adeno3-rna.fa OK 394: ============================== 394: total tests: 75 394: failed tests: 0 394: successful tests: 75 394: ============================== 387/411 Test #394: app_test_pair_align ............................................................... Passed 0.62 sec test 395 Start 395: test_test_funcs_param_chooser 395: Test command: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/test_funcs_param_chooser 395: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/param_chooser 395: Test timeout computed to be: 10000000 395: TEST SUITE test_param_chooser 395: SEQAN_ENABLE_DEBUG == 1 395: SEQAN_ENABLE_TESTING == 1 395: SEQAN_CXX_FLAGS == "SEQAN_CXX_FLAGS_NOT_SET" 395: SEQAN_ASYNC_IO == 1 395: test_param_chooser_quality_distribution_from_prb_file OK 395: test_param_chooser_quality_distribution_from_fastq_file OK 395: test_param_chooser_parse_gapped_params OK 395: test_param_parse_shapes_from_file OK 395: ************************************** 395: Total Tests: 4 395: Skipped: 0 395: Errors: 0 395: ************************************** 388/411 Test #395: test_test_funcs_param_chooser ..................................................... Passed 0.01 sec test 396 Start 396: app_test_rabema 396: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/apps/rabema/tests/run_tests.py" "/build/reproducible-path/seqan2-2.5.2" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu" 396: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/rabema 396: Test timeout computed to be: 10000000 67: test_journaled_string_tree_find_myers OK 67: ************************************** 67: Total Tests: 4 67: Skipped: 0 67: Errors: 0 67: ************************************** 389/411 Test #67: test_journaled_string_tree_find ................................................... Passed 13.23 sec test 397 Start 397: app_test_razers 397: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/apps/razers/tests/run_tests.py" "/build/reproducible-path/seqan2-2.5.2" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu" 397: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/razers 397: Test timeout computed to be: 10000000 116: Return code was 0. 116: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/align/global_alignment_unbanded_score_execution_policy_wavefront.cpp.stdout", "None". 116: Standard output was as expected. 116: Standard error was as expected. 390/411 Test #116: test_demo_dox_align_global_alignment_unbanded_score_execution_policy_wavefront .... Passed 12.77 sec test 398 Start 398: app_test_razers3 398: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/run_tests.py" "/build/reproducible-path/seqan2-2.5.2" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu" 398: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/razers3 398: Test timeout computed to be: 10000000 397: Executing test for razers 397: ========================= 397: 397: razers --low-memory /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_1.fa -o /tmp/tmpybxj6xdp/se-adeno-reads36_1.razers OK 397: razers --low-memory -id /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_1.fa -o /tmp/tmpybxj6xdp/se-adeno-reads36_1-id.razers OK 397: razers --low-memory -id -r /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_1.fa -o /tmp/tmpybxj6xdp/se-adeno-reads36_1-id-r.razers OK 397: razers --low-memory -id -f /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_1.fa -o /tmp/tmpybxj6xdp/se-adeno-reads36_1-id-f.razers OK 397: razers --low-memory -id -i 90 /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_1.fa -o /tmp/tmpybxj6xdp/se-adeno-reads36_1-id-i90.razers OK 397: razers --low-memory -id -i 91 /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_1.fa -o /tmp/tmpybxj6xdp/se-adeno-reads36_1-id-i91.razers OK 397: razers --low-memory -id -i 92 /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_1.fa -o /tmp/tmpybxj6xdp/se-adeno-reads36_1-id-i92.razers OK 397: razers --low-memory -id -i 93 /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_1.fa -o /tmp/tmpybxj6xdp/se-adeno-reads36_1-id-i93.razers OK 397: razers --low-memory -id -i 94 /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_1.fa -o /tmp/tmpybxj6xdp/se-adeno-reads36_1-id-i94.razers OK 397: razers --low-memory -id -i 95 /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_1.fa -o /tmp/tmpybxj6xdp/se-adeno-reads36_1-id-i95.razers OK 397: razers --low-memory -id -i 96 /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_1.fa -o /tmp/tmpybxj6xdp/se-adeno-reads36_1-id-i96.razers OK 397: razers --low-memory -id -i 97 /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_1.fa -o /tmp/tmpybxj6xdp/se-adeno-reads36_1-id-i97.razers OK 397: razers --low-memory -id -i 98 /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_1.fa -o /tmp/tmpybxj6xdp/se-adeno-reads36_1-id-i98.razers OK 397: razers --low-memory -id -i 99 /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_1.fa -o /tmp/tmpybxj6xdp/se-adeno-reads36_1-id-i99.razers OK 397: razers --low-memory -id -i 100 /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_1.fa -o /tmp/tmpybxj6xdp/se-adeno-reads36_1-id-i100.razers OK 397: razers --low-memory -id /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_1.fa -o /tmp/tmpybxj6xdp/se-adeno-reads36_1-id-of0.razers OK 397: razers --low-memory -id /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_1.fa -o /tmp/tmpybxj6xdp/se-adeno-reads36_1-id-of1.fa OK 397: razers --low-memory -id /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_1.fa -o /tmp/tmpybxj6xdp/se-adeno-reads36_1-id-of2.eland OK 397: razers --low-memory -id /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_1.fa -o /tmp/tmpybxj6xdp/se-adeno-reads36_1-id-of3.gff OK 397: razers --low-memory -id -so 0 /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_1.fa -o /tmp/tmpybxj6xdp/se-adeno-reads36_1-id-so0.razers OK 397: razers --low-memory -id -so 1 /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_1.fa -o /tmp/tmpybxj6xdp/se-adeno-reads36_1-id-so1.razers OK 397: razers --low-memory /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_1.fa -o /tmp/tmpybxj6xdp/se-adeno-reads100_1.razers OK 397: razers --low-memory -id /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_1.fa -o /tmp/tmpybxj6xdp/se-adeno-reads100_1-id.razers OK 397: razers --low-memory -id -r /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_1.fa -o /tmp/tmpybxj6xdp/se-adeno-reads100_1-id-r.razers OK 397: razers --low-memory -id -f /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_1.fa -o /tmp/tmpybxj6xdp/se-adeno-reads100_1-id-f.razers OK 397: razers --low-memory -id -i 90 /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_1.fa -o /tmp/tmpybxj6xdp/se-adeno-reads100_1-id-i90.razers OK 397: razers --low-memory -id -i 91 /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_1.fa -o /tmp/tmpybxj6xdp/se-adeno-reads100_1-id-i91.razers OK 397: razers --low-memory -id -i 92 /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_1.fa -o /tmp/tmpybxj6xdp/se-adeno-reads100_1-id-i92.razers OK 397: razers --low-memory -id -i 93 /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_1.fa -o /tmp/tmpybxj6xdp/se-adeno-reads100_1-id-i93.razers OK 397: razers --low-memory -id -i 94 /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_1.fa -o /tmp/tmpybxj6xdp/se-adeno-reads100_1-id-i94.razers OK 397: razers --low-memory -id -i 95 /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_1.fa -o /tmp/tmpybxj6xdp/se-adeno-reads100_1-id-i95.razers OK 397: razers --low-memory -id -i 96 /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_1.fa -o /tmp/tmpybxj6xdp/se-adeno-reads100_1-id-i96.razers OK 397: razers --low-memory -id -i 97 /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_1.fa -o /tmp/tmpybxj6xdp/se-adeno-reads100_1-id-i97.razers OK 397: razers --low-memory -id -i 98 /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_1.fa -o /tmp/tmpybxj6xdp/se-adeno-reads100_1-id-i98.razers OK 397: razers --low-memory -id -i 99 /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_1.fa -o /tmp/tmpybxj6xdp/se-adeno-reads100_1-id-i99.razers OK 398: Executing test for razers3 398: =========================== 398: 398: razers3 -tc 1 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmplj07eqgc/se-adeno-reads36_1-tc1.razers OK 398: razers3 -tc 1 -ng /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmplj07eqgc/se-adeno-reads36_1-ng-tc1.razers OK 398: razers3 -tc 1 -r /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmplj07eqgc/se-adeno-reads36_1-r-tc1.razers OK 398: razers3 -tc 1 -f /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmplj07eqgc/se-adeno-reads36_1-f-tc1.razers OK 398: razers3 -tc 1 -i 90 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmplj07eqgc/se-adeno-reads36_1-i90-tc1.razers OK 398: razers3 -tc 1 -i 91 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmplj07eqgc/se-adeno-reads36_1-i91-tc1.razers OK 398: razers3 -tc 1 -i 92 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmplj07eqgc/se-adeno-reads36_1-i92-tc1.razers OK 398: razers3 -tc 1 -i 93 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmplj07eqgc/se-adeno-reads36_1-i93-tc1.razers OK 398: razers3 -tc 1 -i 94 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmplj07eqgc/se-adeno-reads36_1-i94-tc1.razers OK 398: razers3 -tc 1 -i 95 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmplj07eqgc/se-adeno-reads36_1-i95-tc1.razers OK 398: razers3 -tc 1 -i 96 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmplj07eqgc/se-adeno-reads36_1-i96-tc1.razers OK 398: razers3 -tc 1 -i 97 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmplj07eqgc/se-adeno-reads36_1-i97-tc1.razers OK 398: razers3 -tc 1 -i 98 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmplj07eqgc/se-adeno-reads36_1-i98-tc1.razers OK 398: razers3 -tc 1 -i 99 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmplj07eqgc/se-adeno-reads36_1-i99-tc1.razers OK 398: razers3 -tc 1 -i 100 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmplj07eqgc/se-adeno-reads36_1-i100-tc1.razers OK 398: razers3 -tc 1 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmplj07eqgc/se-adeno-reads36_1-of0-tc1.razers OK 398: razers3 -tc 1 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmplj07eqgc/se-adeno-reads36_1-of1-tc1.fa OK 398: razers3 -tc 1 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmplj07eqgc/se-adeno-reads36_1-of2-tc1.eland OK 398: razers3 -tc 1 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmplj07eqgc/se-adeno-reads36_1-of3-tc1.gff OK 398: razers3 -tc 1 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmplj07eqgc/se-adeno-reads36_1-of4-tc1.sam OK 398: razers3 -tc 1 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmplj07eqgc/se-adeno-reads36_1-of5-tc1.afg OK 398: razers3 -tc 1 -so 0 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmplj07eqgc/se-adeno-reads36_1-so0-tc1.razers OK 398: razers3 -tc 1 -so 1 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmplj07eqgc/se-adeno-reads36_1-so1-tc1.razers OK 398: razers3 -tc 1 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmplj07eqgc/se-adeno-reads100_1-tc1.razers OK 398: razers3 -tc 1 -ng /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmplj07eqgc/se-adeno-reads100_1-ng-tc1.razers OK 398: razers3 -tc 1 -r /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmplj07eqgc/se-adeno-reads100_1-r-tc1.razers OK 398: razers3 -tc 1 -f /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmplj07eqgc/se-adeno-reads100_1-f-tc1.razers OK 398: razers3 -tc 1 -i 90 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmplj07eqgc/se-adeno-reads100_1-i90-tc1.razers OK 398: razers3 -tc 1 -i 91 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmplj07eqgc/se-adeno-reads100_1-i91-tc1.razers OK 398: razers3 -tc 1 -i 92 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmplj07eqgc/se-adeno-reads100_1-i92-tc1.razers OK 398: razers3 -tc 1 -i 93 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmplj07eqgc/se-adeno-reads100_1-i93-tc1.razers OK 398: razers3 -tc 1 -i 94 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmplj07eqgc/se-adeno-reads100_1-i94-tc1.razers OK 398: razers3 -tc 1 -i 95 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmplj07eqgc/se-adeno-reads100_1-i95-tc1.razers OK 398: razers3 -tc 1 -i 96 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmplj07eqgc/se-adeno-reads100_1-i96-tc1.razers OK 398: razers3 -tc 1 -i 97 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmplj07eqgc/se-adeno-reads100_1-i97-tc1.razers OK 398: razers3 -tc 1 -i 98 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmplj07eqgc/se-adeno-reads100_1-i98-tc1.razers OK 120: Return code was 0. 120: Loading files "/build/reproducible-path/seqan2-2.5.2/demos/dox/align/local_alignment_unbanded_score_execution_policy_wavefront.cpp.stdout", "None". 120: Standard output was as expected. 120: Standard error was as expected. 391/411 Test #120: test_demo_dox_align_local_alignment_unbanded_score_execution_policy_wavefront ..... Passed 14.15 sec test 399 Start 399: app_test_razers3_sequential 399: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/run_tests_sequential.py" "/build/reproducible-path/seqan2-2.5.2" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu" 399: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/razers3 399: Test timeout computed to be: 10000000 398: razers3 -tc 1 -i 99 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmplj07eqgc/se-adeno-reads100_1-i99-tc1.razers OK 398: razers3 -tc 1 -i 100 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmplj07eqgc/se-adeno-reads100_1-i100-tc1.razers OK 398: razers3 -tc 1 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmplj07eqgc/se-adeno-reads100_1-of0-tc1.razers OK 398: razers3 -tc 1 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmplj07eqgc/se-adeno-reads100_1-of1-tc1.fa OK 398: razers3 -tc 1 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmplj07eqgc/se-adeno-reads100_1-of2-tc1.eland OK 398: razers3 -tc 1 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmplj07eqgc/se-adeno-reads100_1-of3-tc1.gff OK 398: razers3 -tc 1 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmplj07eqgc/se-adeno-reads100_1-of4-tc1.sam OK 398: razers3 -tc 1 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmplj07eqgc/se-adeno-reads100_1-of5-tc1.afg OK 398: razers3 -tc 1 -so 0 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmplj07eqgc/se-adeno-reads100_1-so0-tc1.razers OK 398: razers3 -tc 1 -so 1 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmplj07eqgc/se-adeno-reads100_1-so1-tc1.razers OK 398: razers3 -tc 1 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmplj07eqgc/pe-adeno-reads36_2-tc1.razers OK 398: razers3 -tc 1 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmplj07eqgc/pe-adeno-reads36_2-tc1.razers OK 398: razers3 -tc 1 -r /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmplj07eqgc/pe-adeno-reads36_2-r-tc1.razers OK 398: razers3 -tc 1 -f /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmplj07eqgc/pe-adeno-reads36_2-f-tc1.razers OK 398: razers3 -tc 1 -i 90 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmplj07eqgc/pe-adeno-reads36_2-i90-tc1.razers OK 398: razers3 -tc 1 -i 91 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmplj07eqgc/pe-adeno-reads36_2-i91-tc1.razers OK 398: razers3 -tc 1 -i 92 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmplj07eqgc/pe-adeno-reads36_2-i92-tc1.razers OK 398: razers3 -tc 1 -i 93 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmplj07eqgc/pe-adeno-reads36_2-i93-tc1.razers OK 398: razers3 -tc 1 -i 94 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmplj07eqgc/pe-adeno-reads36_2-i94-tc1.razers OK 398: razers3 -tc 1 -i 95 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmplj07eqgc/pe-adeno-reads36_2-i95-tc1.razers OK 398: razers3 -tc 1 -i 96 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmplj07eqgc/pe-adeno-reads36_2-i96-tc1.razers OK 398: razers3 -tc 1 -i 97 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmplj07eqgc/pe-adeno-reads36_2-i97-tc1.razers OK 398: razers3 -tc 1 -i 98 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmplj07eqgc/pe-adeno-reads36_2-i98-tc1.razers OK 398: razers3 -tc 1 -i 99 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmplj07eqgc/pe-adeno-reads36_2-i99-tc1.razers OK 398: razers3 -tc 1 -i 100 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmplj07eqgc/pe-adeno-reads36_2-i100-tc1.razers OK 398: razers3 -tc 1 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmplj07eqgc/pe-adeno-reads36_2-of0-tc1.razers OK 398: razers3 -tc 1 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmplj07eqgc/pe-adeno-reads36_2-of1-tc1.fa OK 398: razers3 -tc 1 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmplj07eqgc/pe-adeno-reads36_2-of2-tc1.eland OK 398: razers3 -tc 1 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmplj07eqgc/pe-adeno-reads36_2-of3-tc1.gff OK 398: razers3 -tc 1 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmplj07eqgc/pe-adeno-reads36_2-of4-tc1.sam OK 399: Executing test for razers3 399: =========================== 399: 399: razers3 -tc 0 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpjqpj31vy/se-adeno-reads36_1-tc0.razers OK 399: razers3 -tc 0 -ng /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpjqpj31vy/se-adeno-reads36_1-ng-tc0.razers OK 399: razers3 -tc 0 -r /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpjqpj31vy/se-adeno-reads36_1-r-tc0.razers OK 399: razers3 -tc 0 -f /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpjqpj31vy/se-adeno-reads36_1-f-tc0.razers OK 399: razers3 -tc 0 -i 90 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpjqpj31vy/se-adeno-reads36_1-i90-tc0.razers OK 399: razers3 -tc 0 -i 91 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpjqpj31vy/se-adeno-reads36_1-i91-tc0.razers OK 399: razers3 -tc 0 -i 92 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpjqpj31vy/se-adeno-reads36_1-i92-tc0.razers OK 399: razers3 -tc 0 -i 93 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpjqpj31vy/se-adeno-reads36_1-i93-tc0.razers OK 399: razers3 -tc 0 -i 94 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpjqpj31vy/se-adeno-reads36_1-i94-tc0.razers OK 399: razers3 -tc 0 -i 95 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpjqpj31vy/se-adeno-reads36_1-i95-tc0.razers OK 399: razers3 -tc 0 -i 96 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpjqpj31vy/se-adeno-reads36_1-i96-tc0.razers OK 399: razers3 -tc 0 -i 97 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpjqpj31vy/se-adeno-reads36_1-i97-tc0.razers OK 399: razers3 -tc 0 -i 98 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpjqpj31vy/se-adeno-reads36_1-i98-tc0.razers OK 399: razers3 -tc 0 -i 99 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpjqpj31vy/se-adeno-reads36_1-i99-tc0.razers OK 399: razers3 -tc 0 -i 100 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpjqpj31vy/se-adeno-reads36_1-i100-tc0.razers OK 399: razers3 -tc 0 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpjqpj31vy/se-adeno-reads36_1-of0-tc0.razers OK 399: razers3 -tc 0 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpjqpj31vy/se-adeno-reads36_1-of1-tc0.fa OK 399: razers3 -tc 0 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpjqpj31vy/se-adeno-reads36_1-of2-tc0.eland OK 399: razers3 -tc 0 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpjqpj31vy/se-adeno-reads36_1-of3-tc0.gff OK 399: razers3 -tc 0 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpjqpj31vy/se-adeno-reads36_1-of4-tc0.sam OK 399: razers3 -tc 0 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpjqpj31vy/se-adeno-reads36_1-of5-tc0.afg OK 399: razers3 -tc 0 -so 0 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpjqpj31vy/se-adeno-reads36_1-so0-tc0.razers OK 399: razers3 -tc 0 -so 1 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa -o /tmp/tmpjqpj31vy/se-adeno-reads36_1-so1-tc0.razers OK 399: razers3 -tc 0 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpjqpj31vy/se-adeno-reads100_1-tc0.razers OK 399: razers3 -tc 0 -ng /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpjqpj31vy/se-adeno-reads100_1-ng-tc0.razers OK 399: razers3 -tc 0 -r /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpjqpj31vy/se-adeno-reads100_1-r-tc0.razers OK 399: razers3 -tc 0 -f /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpjqpj31vy/se-adeno-reads100_1-f-tc0.razers OK 399: razers3 -tc 0 -i 90 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpjqpj31vy/se-adeno-reads100_1-i90-tc0.razers OK 399: razers3 -tc 0 -i 91 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpjqpj31vy/se-adeno-reads100_1-i91-tc0.razers OK 399: razers3 -tc 0 -i 92 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpjqpj31vy/se-adeno-reads100_1-i92-tc0.razers OK 399: razers3 -tc 0 -i 93 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpjqpj31vy/se-adeno-reads100_1-i93-tc0.razers OK 399: razers3 -tc 0 -i 94 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpjqpj31vy/se-adeno-reads100_1-i94-tc0.razers OK 399: razers3 -tc 0 -i 95 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpjqpj31vy/se-adeno-reads100_1-i95-tc0.razers OK 399: razers3 -tc 0 -i 96 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpjqpj31vy/se-adeno-reads100_1-i96-tc0.razers OK 399: razers3 -tc 0 -i 97 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpjqpj31vy/se-adeno-reads100_1-i97-tc0.razers OK 399: razers3 -tc 0 -i 98 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpjqpj31vy/se-adeno-reads100_1-i98-tc0.razers OK 396: DELETING TEMP DIR /tmp/tmpv5p64jwc 396: Executing test for rabema 396: ========================= 396: 396: rabema_prepare_sam -i /build/reproducible-path/seqan2-2.5.2/apps/rabema/tests/gold-adeno-hamming-08.sam -o /tmp/tmpv5p64jwc/gold-adeno-hamming-08.by_qname.sam OK 396: rabema_prepare_sam -i /build/reproducible-path/seqan2-2.5.2/apps/rabema/tests/gold-adeno-edit-08.sam -o /tmp/tmpv5p64jwc/gold-adeno-edit-08.by_qname.sam OK 396: rabema_build_gold_standard --distance-metric hamming -e 8 -o /tmp/tmpv5p64jwc/gold-adeno-hamming-08.gsi --reference /tmp/tmpv5p64jwc/adeno-genome.fa --in-bam /build/reproducible-path/seqan2-2.5.2/apps/rabema/tests/gold-adeno-hamming-08.by_coordinate.sam OK 396: rabema_build_gold_standard --distance-metric edit -e 8 -o /tmp/tmpv5p64jwc/gold-adeno-edit-08.gsi --reference /tmp/tmpv5p64jwc/adeno-genome.fa --in-bam /build/reproducible-path/seqan2-2.5.2/apps/rabema/tests/gold-adeno-edit-08.by_coordinate.sam OK 396: rabema_evaluate --distance-metric hamming -e 8 --reference /tmp/tmpv5p64jwc/adeno-genome.fa --in-bam /build/reproducible-path/seqan2-2.5.2/apps/rabema/tests/razers2-adeno-hamming-08.sam --in-gsi /build/reproducible-path/seqan2-2.5.2/apps/rabema/tests/gold-adeno-hamming-08.gsi OK 396: rabema_evaluate --distance-metric hamming -e 8 --reference /tmp/tmpv5p64jwc/adeno-genome.fa --in-bam /build/reproducible-path/seqan2-2.5.2/apps/rabema/tests/razers2-adeno-hamming-04.sam --in-gsi /build/reproducible-path/seqan2-2.5.2/apps/rabema/tests/gold-adeno-hamming-08.gsi OK 396: rabema_evaluate --distance-metric edit -e 8 --reference /tmp/tmpv5p64jwc/adeno-genome.fa --in-bam /build/reproducible-path/seqan2-2.5.2/apps/rabema/tests/razers2-adeno-edit-08.sam --in-gsi /build/reproducible-path/seqan2-2.5.2/apps/rabema/tests/gold-adeno-edit-08.gsi OK 396: rabema_evaluate --distance-metric edit -e 8 --reference /tmp/tmpv5p64jwc/adeno-genome.fa --in-bam /build/reproducible-path/seqan2-2.5.2/apps/rabema/tests/razers2-adeno-edit-04.sam --in-gsi /build/reproducible-path/seqan2-2.5.2/apps/rabema/tests/gold-adeno-edit-08.gsi OK 396: ============================== 396: total tests: 8 396: failed tests: 0 396: successful tests: 8 396: ============================== 392/411 Test #396: app_test_rabema ................................................................... Passed 5.10 sec test 400 Start 400: app_test_sak 400: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/apps/sak/tests/run_tests.py" "/build/reproducible-path/seqan2-2.5.2" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu" 400: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/sak 400: Test timeout computed to be: 10000000 400: DELETING TEMP DIR /tmp/tmpi9qkby0t 400: Executing test for sak 400: ====================== 400: 400: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/sak /build/reproducible-path/seqan2-2.5.2/apps/sak/tests/adeno.fa -o /tmp/tmpi9qkby0t/adeno.all.fa 400: OK 400: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/sak /build/reproducible-path/seqan2-2.5.2/apps/sak/tests/adeno.fa -s 1 -o /tmp/tmpi9qkby0t/adeno.seq1.fa 400: OK 400: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/sak /build/reproducible-path/seqan2-2.5.2/apps/sak/tests/adeno.fa -ss 1-2 -o /tmp/tmpi9qkby0t/adeno.seq1-2.fa 400: OK 400: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/sak /build/reproducible-path/seqan2-2.5.2/apps/sak/tests/adeno.fa -s 3 -o /tmp/tmpi9qkby0t/adeno.seq3.fa 400: OK 400: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/sak /build/reproducible-path/seqan2-2.5.2/apps/sak/tests/adeno.fa -sn gi|9626621 -o /tmp/tmpi9qkby0t/adeno.sn.fa 400: OK 400: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/sak /build/reproducible-path/seqan2-2.5.2/apps/sak/tests/adeno.fa -s 1 -i 5-25 -o /tmp/tmpi9qkby0t/adeno.s1i5-25.fa 400: OK 400: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/sak /build/reproducible-path/seqan2-2.5.2/apps/sak/tests/adeno.fa -ss 1-2 -i 5-25 -o /tmp/tmpi9qkby0t/adeno.s1-2i5-25.fa 400: OK 400: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/sak /build/reproducible-path/seqan2-2.5.2/apps/sak/tests/adeno.fa -s 1 -rc -o /tmp/tmpi9qkby0t/adeno.s1rc.fa 400: OK 400: ============================== 400: total tests: 8 400: failed tests: 0 400: successful tests: 8 400: ============================== 393/411 Test #400: app_test_sak ...................................................................... Passed 0.12 sec test 401 Start 401: app_test_sam2matrix 401: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/apps/sam2matrix/tests/run_tests.py" "/build/reproducible-path/seqan2-2.5.2" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu" 401: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/sam2matrix 401: Test timeout computed to be: 10000000 401: DELETING TEMP DIR /tmp/tmpabkd3tvl 401: Executing test for sam2matrix 401: ============================= 401: 401: sam2matrix -m /build/reproducible-path/seqan2-2.5.2/apps/sam2matrix/tests/ecoli.sam -m /build/reproducible-path/seqan2-2.5.2/apps/sam2matrix/tests/ehec.sam -r /build/reproducible-path/seqan2-2.5.2/apps/sam2matrix/tests/ecoli_0.50_ehec_0.50.fq -rf ecoli.fa -rf ehec.fa -o /tmp/tmpabkd3tvl/test_sam2matrix.tsv OK 401: ============================== 401: total tests: 1 401: failed tests: 0 401: successful tests: 1 401: ============================== 398: razers3 -tc 1 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmplj07eqgc/pe-adeno-reads36_2-of5-tc1.afgDELETING TEMP DIR /tmp/tmplj07eqgc 398: OK 398: razers3 -tc 1 -so 0 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmplj07eqgc/pe-adeno-reads36_2-so0-tc1.razers OK 398: razers3 -tc 1 -so 1 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmplj07eqgc/pe-adeno-reads36_2-so1-tc1.razers OK 398: razers3 -tc 1 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmplj07eqgc/pe-adeno-reads100_2-tc1.razers OK 398: razers3 -tc 1 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmplj07eqgc/pe-adeno-reads100_2-tc1.razers OK 398: razers3 -tc 1 -r /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmplj07eqgc/pe-adeno-reads100_2-r-tc1.razers OK 398: razers3 -tc 1 -f /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmplj07eqgc/pe-adeno-reads100_2-f-tc1.razers OK 398: razers3 -tc 1 -i 90 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmplj07eqgc/pe-adeno-reads100_2-i90-tc1.razers OK 398: razers3 -tc 1 -i 91 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmplj07eqgc/pe-adeno-reads100_2-i91-tc1.razers OK 398: razers3 -tc 1 -i 92 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmplj07eqgc/pe-adeno-reads100_2-i92-tc1.razers OK 398: razers3 -tc 1 -i 93 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmplj07eqgc/pe-adeno-reads100_2-i93-tc1.razers OK 398: razers3 -tc 1 -i 94 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmplj07eqgc/pe-adeno-reads100_2-i94-tc1.razers OK 398: razers3 -tc 1 -i 95 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmplj07eqgc/pe-adeno-reads100_2-i95-tc1.razers OK 398: razers3 -tc 1 -i 96 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmplj07eqgc/pe-adeno-reads100_2-i96-tc1.razers OK 398: razers3 -tc 1 -i 97 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmplj07eqgc/pe-adeno-reads100_2-i97-tc1.razers OK 398: razers3 -tc 1 -i 98 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmplj07eqgc/pe-adeno-reads100_2-i98-tc1.razers OK 398: razers3 -tc 1 -i 99 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmplj07eqgc/pe-adeno-reads100_2-i99-tc1.razers OK 398: razers3 -tc 1 -i 100 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmplj07eqgc/pe-adeno-reads100_2-i100-tc1.razers OK 398: razers3 -tc 1 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmplj07eqgc/pe-adeno-reads100_2-of0-tc1.razers OK 398: razers3 -tc 1 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmplj07eqgc/pe-adeno-reads100_2-of1-tc1.fa OK 398: razers3 -tc 1 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmplj07eqgc/pe-adeno-reads100_2-of2-tc1.eland OK 398: razers3 -tc 1 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmplj07eqgc/pe-adeno-reads100_2-of3-tc1.gff OK 398: razers3 -tc 1 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmplj07eqgc/pe-adeno-reads100_2-of4-tc1.sam OK 398: razers3 -tc 1 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmplj07eqgc/pe-adeno-reads100_2-of5-tc1.afg OK 398: razers3 -tc 1 -so 0 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmplj07eqgc/pe-adeno-reads100_2-so0-tc1.razers OK 398: razers3 -tc 1 -so 1 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmplj07eqgc/pe-adeno-reads100_2-so1-tc1.razers OK 398: ============================== 398: total tests: 92 398: failed tests: 0 398: successful tests: 92 398: ============================== 394/411 Test #401: app_test_sam2matrix ............................................................... Passed 0.09 sec test 402 Start 402: app_test_samcat 402: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/apps/samcat/tests/run_tests.py" "/build/reproducible-path/seqan2-2.5.2" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu" 402: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/samcat 402: Test timeout computed to be: 10000000 395/411 Test #398: app_test_razers3 .................................................................. Passed 3.15 sec test 403 Start 403: app_test_searchjoin 403: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/apps/searchjoin/tests/run_tests.py" "/build/reproducible-path/seqan2-2.5.2" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu" 403: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/searchjoin 403: Test timeout computed to be: 10000000 402: DELETING TEMP DIR /tmp/tmpdrjl66c4 402: Executing test for samcat 402: ========================= 402: 402: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/samcat /build/reproducible-path/seqan2-2.5.2/apps/samcat/tests/ex1_a1.sam /build/reproducible-path/seqan2-2.5.2/apps/samcat/tests/ex1_a2.sam /build/reproducible-path/seqan2-2.5.2/apps/samcat/tests/ex1_a3.sam -o /tmp/tmpdrjl66c4/ex1_merged.sam 402: OK 402: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/samcat /build/reproducible-path/seqan2-2.5.2/apps/samcat/tests/ex1_a1.sam /build/reproducible-path/seqan2-2.5.2/apps/samcat/tests/ex1_a2.sam /build/reproducible-path/seqan2-2.5.2/apps/samcat/tests/ex1_a3.sam -o /tmp/tmpdrjl66c4/ex1_merged.bam 402: OK 402: ============================== 402: total tests: 2 402: failed tests: 0 402: successful tests: 2 402: ============================== 396/411 Test #402: app_test_samcat ................................................................... Passed 0.16 sec test 404 Start 404: app_test_seqan_tcoffee 404: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/run_tests.py" "/build/reproducible-path/seqan2-2.5.2" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu" 404: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/seqan_tcoffee 404: Test timeout computed to be: 10000000 399: razers3 -tc 0 -i 99 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpjqpj31vy/se-adeno-reads100_1-i99-tc0.razers OK 399: razers3 -tc 0 -i 100 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpjqpj31vy/se-adeno-reads100_1-i100-tc0.razers OK 399: razers3 -tc 0 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpjqpj31vy/se-adeno-reads100_1-of0-tc0.razers OK 399: razers3 -tc 0 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpjqpj31vy/se-adeno-reads100_1-of1-tc0.fa OK 399: razers3 -tc 0 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpjqpj31vy/se-adeno-reads100_1-of2-tc0.eland OK 399: razers3 -tc 0 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpjqpj31vy/se-adeno-reads100_1-of3-tc0.gff OK 399: razers3 -tc 0 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpjqpj31vy/se-adeno-reads100_1-of4-tc0.sam OK 399: razers3 -tc 0 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpjqpj31vy/se-adeno-reads100_1-of5-tc0.afg OK 399: razers3 -tc 0 -so 0 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpjqpj31vy/se-adeno-reads100_1-so0-tc0.razers OK 399: razers3 -tc 0 -so 1 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa -o /tmp/tmpjqpj31vy/se-adeno-reads100_1-so1-tc0.razers OK 399: razers3 -tc 0 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpjqpj31vy/pe-adeno-reads36_2-tc0.razers OK 399: razers3 -tc 0 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpjqpj31vy/pe-adeno-reads36_2-tc0.razers OK 399: razers3 -tc 0 -r /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpjqpj31vy/pe-adeno-reads36_2-r-tc0.razers OK 399: razers3 -tc 0 -f /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpjqpj31vy/pe-adeno-reads36_2-f-tc0.razers OK 399: razers3 -tc 0 -i 90 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpjqpj31vy/pe-adeno-reads36_2-i90-tc0.razers OK 399: razers3 -tc 0 -i 91 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpjqpj31vy/pe-adeno-reads36_2-i91-tc0.razers OK 399: razers3 -tc 0 -i 92 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpjqpj31vy/pe-adeno-reads36_2-i92-tc0.razers OK 399: razers3 -tc 0 -i 93 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpjqpj31vy/pe-adeno-reads36_2-i93-tc0.razers OK 399: razers3 -tc 0 -i 94 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpjqpj31vy/pe-adeno-reads36_2-i94-tc0.razers OK 399: razers3 -tc 0 -i 95 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpjqpj31vy/pe-adeno-reads36_2-i95-tc0.razers OK 399: razers3 -tc 0 -i 96 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpjqpj31vy/pe-adeno-reads36_2-i96-tc0.razers OK 399: razers3 -tc 0 -i 97 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpjqpj31vy/pe-adeno-reads36_2-i97-tc0.razers OK 399: razers3 -tc 0 -i 98 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpjqpj31vy/pe-adeno-reads36_2-i98-tc0.razers OK 399: razers3 -tc 0 -i 99 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpjqpj31vy/pe-adeno-reads36_2-i99-tc0.razers OK 399: razers3 -tc 0 -i 100 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpjqpj31vy/pe-adeno-reads36_2-i100-tc0.razers OK 399: razers3 -tc 0 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpjqpj31vy/pe-adeno-reads36_2-of0-tc0.razers OK 399: razers3 -tc 0 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpjqpj31vy/pe-adeno-reads36_2-of1-tc0.fa OK 399: razers3 -tc 0 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpjqpj31vy/pe-adeno-reads36_2-of2-tc0.eland OK 399: razers3 -tc 0 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpjqpj31vy/pe-adeno-reads36_2-of3-tc0.gff OK 399: razers3 -tc 0 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpjqpj31vy/pe-adeno-reads36_2-of4-tc0.sam OK 404: Executing test for seqan_tcoffee 404: ================================ 404: 404: seqan_tcoffee -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/1aab.fa -o /tmp/tmpcyqgal8e/1aab.fasta OK 404: seqan_tcoffee -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/1ad2.fa -o /tmp/tmpcyqgal8e/1ad2.fasta OK 404: seqan_tcoffee -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/2trx.fa -o /tmp/tmpcyqgal8e/2trx.fasta OK 404: seqan_tcoffee -a protein -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/1aab.fa -o /tmp/tmpcyqgal8e/1aab.protein.fasta OK 404: seqan_tcoffee -a protein -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/1ad2.fa -o /tmp/tmpcyqgal8e/1ad2.protein.fasta OK 404: seqan_tcoffee -a protein -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/2trx.fa -o /tmp/tmpcyqgal8e/2trx.protein.fasta OK 404: seqan_tcoffee -m global -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/1aab.fa -o /tmp/tmpcyqgal8e/1aab.mglobal.fasta OK 404: seqan_tcoffee -m local -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/1aab.fa -o /tmp/tmpcyqgal8e/1aab.mlocal.fasta OK 404: seqan_tcoffee -m overlap -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/1aab.fa -o /tmp/tmpcyqgal8e/1aab.moverlap.fasta OK 404: seqan_tcoffee -m lcs -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/1aab.fa -o /tmp/tmpcyqgal8e/1aab.mlcs.fasta OK 404: seqan_tcoffee -m global -m local -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/1aab.fa -o /tmp/tmpcyqgal8e/1aab.mglobal.mlocal.fasta OK 404: seqan_tcoffee -m local -m overlap -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/1aab.fa -o /tmp/tmpcyqgal8e/1aab.mlocal.moverlap.fasta OK 404: seqan_tcoffee -m global -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/1ad2.fa -o /tmp/tmpcyqgal8e/1ad2.mglobal.fasta OK 404: seqan_tcoffee -m local -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/1ad2.fa -o /tmp/tmpcyqgal8e/1ad2.mlocal.fasta OK 404: seqan_tcoffee -m overlap -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/1ad2.fa -o /tmp/tmpcyqgal8e/1ad2.moverlap.fasta OK 404: seqan_tcoffee -m lcs -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/1ad2.fa -o /tmp/tmpcyqgal8e/1ad2.mlcs.fasta OK 404: seqan_tcoffee -m global -m local -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/1ad2.fa -o /tmp/tmpcyqgal8e/1ad2.mglobal.mlocal.fasta OK 404: seqan_tcoffee -m local -m overlap -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/1ad2.fa -o /tmp/tmpcyqgal8e/1ad2.mlocal.moverlap.fasta OK 404: seqan_tcoffee -m global -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/2trx.fa -o /tmp/tmpcyqgal8e/2trx.mglobal.fasta OK 404: seqan_tcoffee -m local -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/2trx.fa -o /tmp/tmpcyqgal8e/2trx.mlocal.fasta OK 404: seqan_tcoffee -m overlap -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/2trx.fa -o /tmp/tmpcyqgal8e/2trx.moverlap.fasta OK 404: seqan_tcoffee -m lcs -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/2trx.fa -o /tmp/tmpcyqgal8e/2trx.mlcs.fasta OK 404: seqan_tcoffee -m global -m local -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/2trx.fa -o /tmp/tmpcyqgal8e/2trx.mglobal.mlocal.fasta OK 404: seqan_tcoffee -m local -m overlap -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/2trx.fa -o /tmp/tmpcyqgal8e/2trx.mlocal.moverlap.fasta OK 404: seqan_tcoffee -g -20 -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/1aab.fa -o /tmp/tmpcyqgal8e/1aab.g-20.fasta OK 404: seqan_tcoffee -e -5 -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/1aab.fa -o /tmp/tmpcyqgal8e/1aab.e-5.fasta OK 404: seqan_tcoffee -ms 10 -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/1aab.fa -o /tmp/tmpcyqgal8e/1aab.ms10.fasta OK 404: seqan_tcoffee -mm -8 -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/1aab.fa -o /tmp/tmpcyqgal8e/1aab.mm-8.fasta OK 404: seqan_tcoffee -g -20 -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/1ad2.fa -o /tmp/tmpcyqgal8e/1ad2.g-20.fasta OK 404: seqan_tcoffee -e -5 -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/1ad2.fa -o /tmp/tmpcyqgal8e/1ad2.e-5.fasta OK 404: seqan_tcoffee -ms 10 -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/1ad2.fa -o /tmp/tmpcyqgal8e/1ad2.ms10.fasta OK 404: seqan_tcoffee -mm -8 -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/1ad2.fa -o /tmp/tmpcyqgal8e/1ad2.mm-8.fasta OK 404: seqan_tcoffee -g -20 -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/2trx.fa -o /tmp/tmpcyqgal8e/2trx.g-20.fasta OK 404: seqan_tcoffee -e -5 -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/2trx.fa -o /tmp/tmpcyqgal8e/2trx.e-5.fasta OK 404: seqan_tcoffee -ms 10 -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/2trx.fa -o /tmp/tmpcyqgal8e/2trx.ms10.fasta OK 404: seqan_tcoffee -mm -8 -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/2trx.fa -o /tmp/tmpcyqgal8e/2trx.mm-8.fasta OK 404: seqan_tcoffee -ma /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/VTML200I -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/1aab.fa -o /tmp/tmpcyqgal8e/1aab.maVTML200.fasta OK 404: seqan_tcoffee -ma /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/VTML200I -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/1ad2.fa -o /tmp/tmpcyqgal8e/1ad2.maVTML200.fasta OK 404: seqan_tcoffee -ma /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/VTML200I -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/2trx.fa -o /tmp/tmpcyqgal8e/2trx.maVTML200.fasta OK 404: seqan_tcoffee -u /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/1aab.newick -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/1aab.fa -o /tmp/tmpcyqgal8e/1aab.u.fasta OK 404: seqan_tcoffee -u /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/1ad2.newick -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/1ad2.fa -o /tmp/tmpcyqgal8e/1ad2.u.fasta OK 404: seqan_tcoffee -u /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/2trx.newick -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/2trx.fa -o /tmp/tmpcyqgal8e/2trx.u.fasta OK 404: seqan_tcoffee -b nj -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/1aab.fa -o /tmp/tmpcyqgal8e/1aab.bnj.fasta OK 404: seqan_tcoffee -b min -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/1aab.fa -o /tmp/tmpcyqgal8e/1aab.bmin.fasta OK 404: seqan_tcoffee -b max -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/1aab.fa -o /tmp/tmpcyqgal8e/1aab.bmax.fasta OK 404: seqan_tcoffee -b avg -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/1aab.fa -o /tmp/tmpcyqgal8e/1aab.bavg.fasta OK 404: seqan_tcoffee -b wavg -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/1aab.fa -o /tmp/tmpcyqgal8e/1aab.bwavg.fasta OK 404: seqan_tcoffee -b nj -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/1ad2.fa -o /tmp/tmpcyqgal8e/1ad2.bnj.fasta OK 404: seqan_tcoffee -b min -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/1ad2.fa -o /tmp/tmpcyqgal8e/1ad2.bmin.fasta OK 404: seqan_tcoffee -b max -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/1ad2.fa -o /tmp/tmpcyqgal8e/1ad2.bmax.fasta OK 404: seqan_tcoffee -b avg -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/1ad2.fa -o /tmp/tmpcyqgal8e/1ad2.bavg.fasta OK 404: seqan_tcoffee -b wavg -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/1ad2.fa -o /tmp/tmpcyqgal8e/1ad2.bwavg.fasta OK 404: seqan_tcoffee -b nj -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/2trx.fa -o /tmp/tmpcyqgal8e/2trx.bnj.fasta OK 404: seqan_tcoffee -b min -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/2trx.fa -o /tmp/tmpcyqgal8e/2trx.bmin.fasta OK 404: seqan_tcoffee -b max -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/2trx.fa -o /tmp/tmpcyqgal8e/2trx.bmax.fasta OK 404: seqan_tcoffee -b avg -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/2trx.fa -o /tmp/tmpcyqgal8e/2trx.bavg.fasta OK 399: razers3 -tc 0 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpjqpj31vy/pe-adeno-reads36_2-of5-tc0.afgDELETING TEMP DIR /tmp/tmpjqpj31vy 399: OK 399: razers3 -tc 0 -so 0 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpjqpj31vy/pe-adeno-reads36_2-so0-tc0.razers OK 399: razers3 -tc 0 -so 1 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads36_2.fa -o /tmp/tmpjqpj31vy/pe-adeno-reads36_2-so1-tc0.razers OK 399: razers3 -tc 0 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpjqpj31vy/pe-adeno-reads100_2-tc0.razers OK 399: razers3 -tc 0 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpjqpj31vy/pe-adeno-reads100_2-tc0.razers OK 399: razers3 -tc 0 -r /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpjqpj31vy/pe-adeno-reads100_2-r-tc0.razers OK 399: razers3 -tc 0 -f /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpjqpj31vy/pe-adeno-reads100_2-f-tc0.razers OK 399: razers3 -tc 0 -i 90 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpjqpj31vy/pe-adeno-reads100_2-i90-tc0.razers OK 399: razers3 -tc 0 -i 91 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpjqpj31vy/pe-adeno-reads100_2-i91-tc0.razers OK 399: razers3 -tc 0 -i 92 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpjqpj31vy/pe-adeno-reads100_2-i92-tc0.razers OK 399: razers3 -tc 0 -i 93 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpjqpj31vy/pe-adeno-reads100_2-i93-tc0.razers OK 399: razers3 -tc 0 -i 94 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpjqpj31vy/pe-adeno-reads100_2-i94-tc0.razers OK 399: razers3 -tc 0 -i 95 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpjqpj31vy/pe-adeno-reads100_2-i95-tc0.razers OK 399: razers3 -tc 0 -i 96 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpjqpj31vy/pe-adeno-reads100_2-i96-tc0.razers OK 399: razers3 -tc 0 -i 97 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpjqpj31vy/pe-adeno-reads100_2-i97-tc0.razers OK 399: razers3 -tc 0 -i 98 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpjqpj31vy/pe-adeno-reads100_2-i98-tc0.razers OK 399: razers3 -tc 0 -i 99 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpjqpj31vy/pe-adeno-reads100_2-i99-tc0.razers OK 399: razers3 -tc 0 -i 100 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpjqpj31vy/pe-adeno-reads100_2-i100-tc0.razers OK 399: razers3 -tc 0 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpjqpj31vy/pe-adeno-reads100_2-of0-tc0.razers OK 399: razers3 -tc 0 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpjqpj31vy/pe-adeno-reads100_2-of1-tc0.fa OK 399: razers3 -tc 0 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpjqpj31vy/pe-adeno-reads100_2-of2-tc0.eland OK 399: razers3 -tc 0 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpjqpj31vy/pe-adeno-reads100_2-of3-tc0.gff OK 399: razers3 -tc 0 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpjqpj31vy/pe-adeno-reads100_2-of4-tc0.sam OK 399: razers3 -tc 0 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpjqpj31vy/pe-adeno-reads100_2-of5-tc0.afg OK 399: razers3 -tc 0 -so 0 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpjqpj31vy/pe-adeno-reads100_2-so0-tc0.razers OK 399: razers3 -tc 0 -so 1 /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers3/tests/adeno-reads100_2.fa -o /tmp/tmpjqpj31vy/pe-adeno-reads100_2-so1-tc0.razers OK 399: ============================== 399: total tests: 92 399: failed tests: 0 399: successful tests: 92 399: ============================== 397/411 Test #399: app_test_razers3_sequential ....................................................... Passed 3.03 sec test 405 Start 405: app_test_seqcons2 405: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/apps/seqcons2/tests/run_tests.py" "/build/reproducible-path/seqan2-2.5.2" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu" 405: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/seqcons2 405: Test timeout computed to be: 10000000 404: seqan_tcoffee -b wavg -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/2trx.fa -o /tmp/tmpcyqgal8e/2trx.bwavg.fastaDELETING TEMP DIR /tmp/tmpcyqgal8e 404: OK 404: seqan_tcoffee -i /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/1aab.fasta OK 404: seqan_tcoffee -i /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/1ad2.fasta OK 404: seqan_tcoffee -i /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/2trx.fasta OK 404: seqan_tcoffee -a dna -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/adeno2.fa -o /tmp/tmpcyqgal8e/adeno2.fasta OK 404: seqan_tcoffee -a dna -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/adeno3.fa -o /tmp/tmpcyqgal8e/adeno3.fasta OK 404: seqan_tcoffee -a dna -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/adeno4.fa -o /tmp/tmpcyqgal8e/adeno4.fasta OK 404: seqan_tcoffee -a rna -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/adeno2-rna.fa -o /tmp/tmpcyqgal8e/adeno2-rna.fasta OK 404: seqan_tcoffee -a rna -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/adeno3-rna.fa -o /tmp/tmpcyqgal8e/adeno3-rna.fasta OK 404: seqan_tcoffee -a rna -s /build/reproducible-path/seqan2-2.5.2/apps/seqan_tcoffee/tests/adeno4-rna.fa -o /tmp/tmpcyqgal8e/adeno4-rna.fasta OK 404: ============================== 404: total tests: 66 404: failed tests: 0 404: successful tests: 66 404: ============================== 398/411 Test #404: app_test_seqan_tcoffee ............................................................ Passed 1.57 sec test 406 Start 406: app_test_sgip 406: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/apps/sgip/tests/run_tests.py" "/build/reproducible-path/seqan2-2.5.2" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu" 406: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/sgip 406: Test timeout computed to be: 10000000 405: DELETING TEMP DIR /tmp/tmp_ubdasv3 405: Executing test for seqcons2 405: =========================== 405: 405: seqcons2 -m overlap_consensus -i /build/reproducible-path/seqan2-2.5.2/apps/seqcons2/tests/alns1.sam -oc /tmp/tmp_ubdasv3/alns1.overlap_consensus.fa -oa /tmp/tmp_ubdasv3/alns1.overlap_consensus.sam OK 405: seqcons2 -m nop -i /build/reproducible-path/seqan2-2.5.2/apps/seqcons2/tests/alns1.sam -oc /tmp/tmp_ubdasv3/alns1.nop.fa -oa /tmp/tmp_ubdasv3/alns1.nop.sam OK 405: seqcons2 -m overlap_consensus -i /build/reproducible-path/seqan2-2.5.2/apps/seqcons2/tests/alns1.sam -oa /tmp/tmp_ubdasv3/alns1.overlap_consensus.sam -oc /tmp/tmp_ubdasv3/alns1.overlap_consensus.fa OK 405: seqcons2 -m pos_consensus -i /build/reproducible-path/seqan2-2.5.2/apps/seqcons2/tests/alns1.sam -oa /tmp/tmp_ubdasv3/alns1.pos_consensus.sam -oc /tmp/tmp_ubdasv3/alns1.pos_consensus.fa OK 405: seqcons2 -m contig_consensus -i /build/reproducible-path/seqan2-2.5.2/apps/seqcons2/tests/alns1.sam -oa /tmp/tmp_ubdasv3/alns1.contig_consensus.sam -oc /tmp/tmp_ubdasv3/alns1.contig_consensus.fa OK 405: seqcons2 -m realign -i /build/reproducible-path/seqan2-2.5.2/apps/seqcons2/tests/alns1.sam -oa /tmp/tmp_ubdasv3/alns1.realign.sam -oc /tmp/tmp_ubdasv3/alns1.realign.fa OK 405: seqcons2 -m nop -i /build/reproducible-path/seqan2-2.5.2/apps/seqcons2/tests/alns1.sam -oa /tmp/tmp_ubdasv3/alns1.nop.sam -oc /tmp/tmp_ubdasv3/alns1.nop.fa OK 405: seqcons2 -m overlap_consensus -i /build/reproducible-path/seqan2-2.5.2/apps/seqcons2/tests/alns1.sam -oa /tmp/tmp_ubdasv3/alns1.overlap_consensus.txt OK 405: seqcons2 -m pos_consensus -i /build/reproducible-path/seqan2-2.5.2/apps/seqcons2/tests/alns1.sam -oa /tmp/tmp_ubdasv3/alns1.pos_consensus.txt OK 405: seqcons2 -m contig_consensus -i /build/reproducible-path/seqan2-2.5.2/apps/seqcons2/tests/alns1.sam -oa /tmp/tmp_ubdasv3/alns1.contig_consensus.txt OK 405: seqcons2 -m realign -i /build/reproducible-path/seqan2-2.5.2/apps/seqcons2/tests/alns1.sam -oa /tmp/tmp_ubdasv3/alns1.realign.txt OK 405: seqcons2 -m nop -i /build/reproducible-path/seqan2-2.5.2/apps/seqcons2/tests/alns1.sam -oa /tmp/tmp_ubdasv3/alns1.nop.txt OK 405: seqcons2 -m align_consensus -i /build/reproducible-path/seqan2-2.5.2/apps/seqcons2/tests/seqs2.fa -oa /tmp/tmp_ubdasv3/seqs2.align_consensus.sam -oc /tmp/tmp_ubdasv3/seqs2.align_consensus.fa OK 405: seqcons2 -m align_consensus -i /build/reproducible-path/seqan2-2.5.2/apps/seqcons2/tests/seqs2.fa -oa /tmp/tmp_ubdasv3/seqs2.align_consensus.txt OK 405: ============================== 405: total tests: 14 405: failed tests: 0 405: successful tests: 14 405: ============================== 399/411 Test #405: app_test_seqcons2 ................................................................. Passed 0.58 sec test 407 Start 407: app_test_snp_store 407: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/apps/snp_store/tests/run_tests.py" "/build/reproducible-path/seqan2-2.5.2" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu" 407: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/snp_store 407: Test timeout computed to be: 10000000 406: DELETING TEMP DIR /tmp/tmp2w3o61rv 406: Executing test for sgip 406: ========================= 406: 406: sgip -o /build/reproducible-path/seqan2-2.5.2/apps/sgip/tests/../example/r01/iso_r01_m200.A00 -c /build/reproducible-path/seqan2-2.5.2/apps/sgip/tests/../example/r01/iso_r01_m200.B00 -v 2 -i OK 406: sgip -o /build/reproducible-path/seqan2-2.5.2/apps/sgip/tests/../example/r01/iso_r01_m200.A01 -c /build/reproducible-path/seqan2-2.5.2/apps/sgip/tests/../example/r01/iso_r01_m200.B01 -v 2 -i OK 406: sgip -o /build/reproducible-path/seqan2-2.5.2/apps/sgip/tests/../example/r01/iso_r01_m200.A00 -c /build/reproducible-path/seqan2-2.5.2/apps/sgip/tests/../example/r01/iso_r01_m200.B01 -v 2 -i OK 406: sgip -o /build/reproducible-path/seqan2-2.5.2/apps/sgip/tests/../example/r01/iso_r01_m200.A00 -v 2 OK 406: sgip -o /build/reproducible-path/seqan2-2.5.2/apps/sgip/tests/../example/srg/latin-4 -v 2 OK 406: sgip -o /build/reproducible-path/seqan2-2.5.2/apps/sgip/tests/../example/srg/lattice-4 -v 2 OK 406: sgip -o /build/reproducible-path/seqan2-2.5.2/apps/sgip/tests/../example/srg/paley-5 -v 2 OK 406: sgip -o /build/reproducible-path/seqan2-2.5.2/apps/sgip/tests/../example/srg/sts-7 -v 2 OK 406: sgip -o /build/reproducible-path/seqan2-2.5.2/apps/sgip/tests/../example/srg/triang-5 -v 2 OK 406: ============================== 406: total tests: 9 406: failed tests: 0 406: successful tests: 9 406: ============================== 400/411 Test #406: app_test_sgip ..................................................................... Passed 0.77 sec test 408 Start 408: app_test_splazers 408: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/run_tests.py" "/build/reproducible-path/seqan2-2.5.2" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu" 408: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/splazers 408: Test timeout computed to be: 10000000 392: DELETING TEMP DIR /tmp/tmpgcib_19t 392: Executing test for micro_razers 392: =============================== 392: 392: micro_razers /build/reproducible-path/seqan2-2.5.2/apps/micro_razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/micro_razers/tests/adeno-reads36_1.fa -o /tmp/tmpgcib_19t/se-adeno-reads36_1_default.razers OK 392: micro_razers -sL 14 /build/reproducible-path/seqan2-2.5.2/apps/micro_razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/micro_razers/tests/adeno-reads36_1.fa -o /tmp/tmpgcib_19t/se-adeno-reads36_1_sl14.razers OK 392: micro_razers -sL 14 /build/reproducible-path/seqan2-2.5.2/apps/micro_razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/micro_razers/tests/adeno-reads36_1.fa -o /tmp/tmpgcib_19t/se-adeno-reads36_1_sl14.sam OK 392: micro_razers -sL 14 -sE /build/reproducible-path/seqan2-2.5.2/apps/micro_razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/micro_razers/tests/adeno-reads36_1.fa -o /tmp/tmpgcib_19t/se-adeno-reads36_1_sl14_se.razers OK 392: micro_razers -sL 15 /build/reproducible-path/seqan2-2.5.2/apps/micro_razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/micro_razers/tests/adeno-reads36_1.fa -o /tmp/tmpgcib_19t/se-adeno-reads36_1_sl15.razers OK 392: micro_razers -sL 15 /build/reproducible-path/seqan2-2.5.2/apps/micro_razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/micro_razers/tests/adeno-reads36_1.fa -o /tmp/tmpgcib_19t/se-adeno-reads36_1_sl15.sam OK 392: micro_razers -sL 15 -sE /build/reproducible-path/seqan2-2.5.2/apps/micro_razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/micro_razers/tests/adeno-reads36_1.fa -o /tmp/tmpgcib_19t/se-adeno-reads36_1_sl15_se.razers OK 392: micro_razers -sL 16 /build/reproducible-path/seqan2-2.5.2/apps/micro_razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/micro_razers/tests/adeno-reads36_1.fa -o /tmp/tmpgcib_19t/se-adeno-reads36_1_sl16.razers OK 392: micro_razers -sL 16 /build/reproducible-path/seqan2-2.5.2/apps/micro_razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/micro_razers/tests/adeno-reads36_1.fa -o /tmp/tmpgcib_19t/se-adeno-reads36_1_sl16.sam OK 392: micro_razers -sL 16 -sE /build/reproducible-path/seqan2-2.5.2/apps/micro_razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/micro_razers/tests/adeno-reads36_1.fa -o /tmp/tmpgcib_19t/se-adeno-reads36_1_sl16_se.razers OK 392: micro_razers -sL 17 /build/reproducible-path/seqan2-2.5.2/apps/micro_razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/micro_razers/tests/adeno-reads36_1.fa -o /tmp/tmpgcib_19t/se-adeno-reads36_1_sl17.razers OK 392: micro_razers -sL 17 /build/reproducible-path/seqan2-2.5.2/apps/micro_razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/micro_razers/tests/adeno-reads36_1.fa -o /tmp/tmpgcib_19t/se-adeno-reads36_1_sl17.sam OK 392: micro_razers -sL 17 -sE /build/reproducible-path/seqan2-2.5.2/apps/micro_razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/micro_razers/tests/adeno-reads36_1.fa -o /tmp/tmpgcib_19t/se-adeno-reads36_1_sl17_se.razers OK 392: micro_razers -sL 18 /build/reproducible-path/seqan2-2.5.2/apps/micro_razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/micro_razers/tests/adeno-reads36_1.fa -o /tmp/tmpgcib_19t/se-adeno-reads36_1_sl18.razers OK 392: micro_razers -sL 18 /build/reproducible-path/seqan2-2.5.2/apps/micro_razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/micro_razers/tests/adeno-reads36_1.fa -o /tmp/tmpgcib_19t/se-adeno-reads36_1_sl18.sam OK 392: micro_razers -sL 18 -sE /build/reproducible-path/seqan2-2.5.2/apps/micro_razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/micro_razers/tests/adeno-reads36_1.fa -o /tmp/tmpgcib_19t/se-adeno-reads36_1_sl18_se.razers OK 392: micro_razers -sL 19 /build/reproducible-path/seqan2-2.5.2/apps/micro_razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/micro_razers/tests/adeno-reads36_1.fa -o /tmp/tmpgcib_19t/se-adeno-reads36_1_sl19.razers OK 392: micro_razers -sL 19 /build/reproducible-path/seqan2-2.5.2/apps/micro_razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/micro_razers/tests/adeno-reads36_1.fa -o /tmp/tmpgcib_19t/se-adeno-reads36_1_sl19.sam OK 392: micro_razers -sL 19 -sE /build/reproducible-path/seqan2-2.5.2/apps/micro_razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/micro_razers/tests/adeno-reads36_1.fa -o /tmp/tmpgcib_19t/se-adeno-reads36_1_sl19_se.razers OK 392: micro_razers -sL 20 /build/reproducible-path/seqan2-2.5.2/apps/micro_razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/micro_razers/tests/adeno-reads36_1.fa -o /tmp/tmpgcib_19t/se-adeno-reads36_1_sl20.razers OK 392: micro_razers -sL 20 /build/reproducible-path/seqan2-2.5.2/apps/micro_razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/micro_razers/tests/adeno-reads36_1.fa -o /tmp/tmpgcib_19t/se-adeno-reads36_1_sl20.sam OK 392: micro_razers -sL 20 -sE /build/reproducible-path/seqan2-2.5.2/apps/micro_razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/micro_razers/tests/adeno-reads36_1.fa -o /tmp/tmpgcib_19t/se-adeno-reads36_1_sl20_se.razers OK 392: micro_razers -sL 18 -m 20 -pa /build/reproducible-path/seqan2-2.5.2/apps/micro_razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/micro_razers/tests/adeno-reads36_1.fa -o /tmp/tmpgcib_19t/se-adeno-reads36_1_sl18_m20_pa.razers OK 392: ============================== 392: total tests: 23 392: failed tests: 0 392: successful tests: 23 392: ============================== 401/411 Test #392: app_test_micro_razers ............................................................. Passed 10.88 sec test 409 Start 409: app_test_stellar 409: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/apps/stellar/tests/run_tests.py" "/build/reproducible-path/seqan2-2.5.2" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu" 409: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/stellar 409: Test timeout computed to be: 10000000 408: Executing test for splazers 408: ========================= 408: 408: splazers /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_default.out OK 408: splazers -sm 16 -ep 0 -es 0 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml16_ep0_es0.out OK 408: splazers -sm 16 -ep 0 -es 1 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml16_ep0_es1.out OK 408: splazers -sm 16 -ep 0 -es 2 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml16_ep0_es2.out OK 408: splazers -sm 16 -ep 1 -es 0 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml16_ep1_es0.out OK 408: splazers -sm 16 -ep 1 -es 1 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml16_ep1_es1.out OK 408: splazers -sm 16 -ep 1 -es 2 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml16_ep1_es2.out OK 408: splazers -sm 17 -ep 0 -es 0 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml17_ep0_es0.out OK 408: splazers -sm 17 -ep 0 -es 1 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml17_ep0_es1.out OK 408: splazers -sm 17 -ep 0 -es 2 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml17_ep0_es2.out OK 408: splazers -sm 17 -ep 1 -es 0 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml17_ep1_es0.out OK 408: splazers -sm 17 -ep 1 -es 1 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml17_ep1_es1.out OK 408: splazers -sm 17 -ep 1 -es 2 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml17_ep1_es2.out OK 408: splazers -sm 18 -ep 0 -es 0 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml18_ep0_es0.out OK 408: splazers -sm 18 -ep 0 -es 1 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml18_ep0_es1.out OK 408: splazers -sm 18 -ep 0 -es 2 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml18_ep0_es2.out OK 408: splazers -sm 18 -ep 1 -es 0 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml18_ep1_es0.out OK 408: splazers -sm 18 -ep 1 -es 1 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml18_ep1_es1.out OK 408: splazers -sm 18 -ep 1 -es 2 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml18_ep1_es2.out OK 408: splazers -sm 19 -ep 0 -es 0 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml19_ep0_es0.out OK 408: splazers -sm 19 -ep 0 -es 1 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml19_ep0_es1.out OK 408: splazers -sm 19 -ep 0 -es 2 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml19_ep0_es2.out OK 408: splazers -sm 19 -ep 1 -es 0 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml19_ep1_es0.out OK 408: splazers -sm 19 -ep 1 -es 1 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml19_ep1_es1.out OK 408: splazers -sm 19 -ep 1 -es 2 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml19_ep1_es2.out OK 408: splazers -sm 20 -ep 0 -es 0 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml20_ep0_es0.out OK 408: splazers -sm 20 -ep 0 -es 1 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml20_ep0_es1.out OK 408: splazers -sm 20 -ep 0 -es 2 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml20_ep0_es2.out OK 408: splazers -sm 20 -ep 1 -es 0 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml20_ep1_es0.out OK 408: splazers -sm 20 -ep 1 -es 1 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml20_ep1_es1.out OK 408: splazers -sm 20 -ep 1 -es 2 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml20_ep1_es2.out OK 408: splazers -sm 21 -ep 0 -es 0 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml21_ep0_es0.out OK 408: splazers -sm 21 -ep 0 -es 1 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml21_ep0_es1.out OK 397: razers --low-memory -id -i 100 /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_1.fa -o /tmp/tmpybxj6xdp/se-adeno-reads100_1-id-i100.razers OK 397: razers --low-memory -id /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_1.fa -o /tmp/tmpybxj6xdp/se-adeno-reads100_1-id-of0.razers OK 397: razers --low-memory -id /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_1.fa -o /tmp/tmpybxj6xdp/se-adeno-reads100_1-id-of1.fa OK 397: razers --low-memory -id /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_1.fa -o /tmp/tmpybxj6xdp/se-adeno-reads100_1-id-of2.eland OK 397: razers --low-memory -id /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_1.fa -o /tmp/tmpybxj6xdp/se-adeno-reads100_1-id-of3.gff OK 397: razers --low-memory -id -so 0 /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_1.fa -o /tmp/tmpybxj6xdp/se-adeno-reads100_1-id-so0.razers OK 397: razers --low-memory -id -so 1 /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_1.fa -o /tmp/tmpybxj6xdp/se-adeno-reads100_1-id-so1.razers OK 397: razers --low-memory /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_2.fa -o /tmp/tmpybxj6xdp/pe-adeno-reads36_2.razers OK 397: razers --low-memory -id /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_2.fa -o /tmp/tmpybxj6xdp/pe-adeno-reads36_2-id.razers OK 397: razers --low-memory -id -r /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_2.fa -o /tmp/tmpybxj6xdp/pe-adeno-reads36_2-id-r.razers OK 397: razers --low-memory -id -f /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_2.fa -o /tmp/tmpybxj6xdp/pe-adeno-reads36_2-id-f.razers OK 397: razers --low-memory -id -i 90 /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_2.fa -o /tmp/tmpybxj6xdp/pe-adeno-reads36_2-id-i90.razers OK 397: razers --low-memory -id -i 91 /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_2.fa -o /tmp/tmpybxj6xdp/pe-adeno-reads36_2-id-i91.razers OK 397: razers --low-memory -id -i 92 /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_2.fa -o /tmp/tmpybxj6xdp/pe-adeno-reads36_2-id-i92.razers OK 397: razers --low-memory -id -i 93 /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_2.fa -o /tmp/tmpybxj6xdp/pe-adeno-reads36_2-id-i93.razers OK 397: razers --low-memory -id -i 94 /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_2.fa -o /tmp/tmpybxj6xdp/pe-adeno-reads36_2-id-i94.razers OK 397: razers --low-memory -id -i 95 /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_2.fa -o /tmp/tmpybxj6xdp/pe-adeno-reads36_2-id-i95.razers OK 397: razers --low-memory -id -i 96 /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_2.fa -o /tmp/tmpybxj6xdp/pe-adeno-reads36_2-id-i96.razers OK 397: razers --low-memory -id -i 97 /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_2.fa -o /tmp/tmpybxj6xdp/pe-adeno-reads36_2-id-i97.razers OK 397: razers --low-memory -id -i 98 /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_2.fa -o /tmp/tmpybxj6xdp/pe-adeno-reads36_2-id-i98.razers OK 397: razers --low-memory -id -i 99 /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_2.fa -o /tmp/tmpybxj6xdp/pe-adeno-reads36_2-id-i99.razers OK 397: razers --low-memory -id -i 100 /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_2.fa -o /tmp/tmpybxj6xdp/pe-adeno-reads36_2-id-i100.razers OK 397: razers --low-memory -id /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_2.fa -o /tmp/tmpybxj6xdp/pe-adeno-reads36_2-id-of0.razers OK 397: razers --low-memory -id /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_2.fa -o /tmp/tmpybxj6xdp/pe-adeno-reads36_2-id-of1.fa OK 397: razers --low-memory -id /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_2.fa -o /tmp/tmpybxj6xdp/pe-adeno-reads36_2-id-of2.eland OK 397: razers --low-memory -id /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_2.fa -o /tmp/tmpybxj6xdp/pe-adeno-reads36_2-id-of3.gff OK 397: razers --low-memory -id -so 0 /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_2.fa -o /tmp/tmpybxj6xdp/pe-adeno-reads36_2-id-so0.razers OK 397: razers --low-memory -id -so 1 /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads36_2.fa -o /tmp/tmpybxj6xdp/pe-adeno-reads36_2-id-so1.razers OK 397: razers --low-memory /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_2.fa -o /tmp/tmpybxj6xdp/pe-adeno-reads100_2.razers OK 408: splazers -sm 21 -ep 0 -es 2 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml21_ep0_es2.out OK 408: splazers -sm 21 -ep 1 -es 0 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml21_ep1_es0.out OK 408: splazers -sm 21 -ep 1 -es 1 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml21_ep1_es1.out OK 408: splazers -sm 21 -ep 1 -es 2 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml21_ep1_es2.out OK 408: splazers -sm 22 -ep 0 -es 0 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml22_ep0_es0.out OK 408: splazers -sm 22 -ep 0 -es 1 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml22_ep0_es1.out OK 408: splazers -sm 22 -ep 0 -es 2 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml22_ep0_es2.out OK 408: splazers -sm 22 -ep 1 -es 0 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml22_ep1_es0.out OK 408: splazers -sm 22 -ep 1 -es 1 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml22_ep1_es1.out OK 408: splazers -sm 22 -ep 1 -es 2 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml22_ep1_es2.out OK 408: splazers -sm 23 -ep 0 -es 0 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml23_ep0_es0.out OK 408: splazers -sm 23 -ep 0 -es 1 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml23_ep0_es1.out OK 408: splazers -sm 23 -ep 0 -es 2 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml23_ep0_es2.out OK 408: splazers -sm 23 -ep 1 -es 0 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml23_ep1_es0.out OK 408: splazers -sm 23 -ep 1 -es 1 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml23_ep1_es1.out OK 408: splazers -sm 23 -ep 1 -es 2 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml23_ep1_es2.out OK 408: splazers -sm 24 -ep 0 -es 0 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml24_ep0_es0.out OK 408: splazers -sm 24 -ep 0 -es 1 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml24_ep0_es1.out OK 408: splazers -sm 24 -ep 0 -es 2 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml24_ep0_es2.out OK 408: splazers -sm 24 -ep 1 -es 0 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml24_ep1_es0.out OK 408: splazers -sm 24 -ep 1 -es 1 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml24_ep1_es1.out OK 408: splazers -sm 24 -ep 1 -es 2 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml24_ep1_es2.out OK 408: splazers -sm 25 -ep 0 -es 0 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml25_ep0_es0.out OK 408: splazers -sm 25 -ep 0 -es 1 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml25_ep0_es1.out OK 408: splazers -sm 25 -ep 0 -es 2 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml25_ep0_es2.out OK 408: splazers -sm 25 -ep 1 -es 0 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml25_ep1_es0.out OK 408: splazers -sm 25 -ep 1 -es 1 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml25_ep1_es1.out OK 408: splazers -sm 25 -ep 1 -es 2 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml25_ep1_es2.out OK 408: splazers -r -id -sm 20 -ep 1 -es 1 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml20-r_ep1_es1.out OK 408: splazers -f -id -sm 20 -ep 1 -es 1 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml20-f_ep1_es1.out OK 408: splazers -i 90 -sm 20 -ep 1 -es 1 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml20-i90_ep1_es1.out OK 408: splazers -i 91 -sm 20 -ep 1 -es 1 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml20-i91_ep1_es1.out OK 408: splazers -i 92 -sm 20 -ep 1 -es 1 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml20-i92_ep1_es1.out OK 408: splazers -i 93 -sm 20 -ep 1 -es 1 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml20-i93_ep1_es1.out OK 408: splazers -i 94 -sm 20 -ep 1 -es 1 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml20-i94_ep1_es1.outDELETING TEMP DIR /tmp/tmpbdfhar22 408: OK 408: splazers -i 95 -sm 20 -ep 1 -es 1 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml20-i95_ep1_es1.out OK 408: splazers -i 96 -sm 20 -ep 1 -es 1 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml20-i96_ep1_es1.out OK 408: splazers -i 97 -sm 20 -ep 1 -es 1 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml20-i97_ep1_es1.out OK 408: splazers -i 98 -sm 20 -ep 1 -es 1 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml20-i98_ep1_es1.out OK 408: splazers -i 99 -sm 20 -ep 1 -es 1 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml20-i99_ep1_es1.out OK 408: splazers -of 3 -sm 20 -ep 1 -es 1 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml20-of3_ep1_es1.out OK 408: splazers -of 4 -sm 20 -ep 1 -es 1 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml20-of4_ep1_es1.out OK 408: splazers -so 0 -sm 20 -ep 1 -es 1 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml20-so0_ep1_es1.out OK 408: splazers -so 1 -sm 20 -ep 1 -es 1 /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads100_1.fa -o /tmp/tmpbdfhar22/se-adeno-reads100_1_mml20-so1_ep1_es1.out OK 408: splazers -an /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/splazers/tests/adeno-reads-pe.sam -o /tmp/tmpbdfhar22/anchored_adeno_example100.out -ll 300 -le 90 OK 408: ============================== 408: total tests: 78 408: failed tests: 0 408: successful tests: 78 408: ============================== 402/411 Test #408: app_test_splazers ................................................................. Passed 3.87 sec test 410 Start 410: app_test_tree_recon 410: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/apps/tree_recon/tests/run_tests.py" "/build/reproducible-path/seqan2-2.5.2" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu" 410: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/tree_recon 410: Test timeout computed to be: 10000000 386: DELETING TEMP DIR /tmp/tmp5y1fmret 386: Executing test for bs_tools 386: ========================= 386: 386: Some tests only run on Linux+x86/amd64 because of rounding differences. 386: bisar -e3 4 -e4 5 -o /tmp/tmp5y1fmret/reads_se_N6000_0.CT_GA.verified.sam /build/reproducible-path/seqan2-2.5.2/apps/bs_tools/tests/reads_se_N6000.CT_GA.sam /build/reproducible-path/seqan2-2.5.2/apps/bs_tools/tests/hg18_chr21_3000.fa /build/reproducible-path/seqan2-2.5.2/apps/bs_tools/tests/reads_se_N6000.fastq 386: OK 386: bisar -gas -4.5 -ges -2.0 -der 0.001 -bsc 0.99 -gmr 0.5 -i 0.8 -rn 0.001 -pms 0.9 -e3 4 -e4 5 -o /tmp/tmp5y1fmret/reads_se_N6000_1.CT_GA.verified.sam /build/reproducible-path/seqan2-2.5.2/apps/bs_tools/tests/reads_se_N6000.CT_GA.sam /build/reproducible-path/seqan2-2.5.2/apps/bs_tools/tests/hg18_chr21_3000.fa /build/reproducible-path/seqan2-2.5.2/apps/bs_tools/tests/reads_se_N6000.fastq 386: OK 386: bisar -nse -nsi -nsd -gas -4.5 -ges -2.0 -der 0.001 -bsc 0.99 -gmr 0.5 -i 0.8 -rn 0.001 -pms 0.9 -e3 4 -e4 5 -o /tmp/tmp5y1fmret/reads_se_N6000_2.CT_GA.verified.sam /build/reproducible-path/seqan2-2.5.2/apps/bs_tools/tests/reads_se_N6000.CT_GA.sam /build/reproducible-path/seqan2-2.5.2/apps/bs_tools/tests/hg18_chr21_3000.fa /build/reproducible-path/seqan2-2.5.2/apps/bs_tools/tests/reads_se_N6000.fastq 386: OK 386: bisar -nse -nsi -nsd -gas -4.5 -ges -2.0 -der 0.001 -bsc 0.99 -gmr 0.2 -i 0.8 -rn 0.001 -pms 0.9 -e3 4 -e4 5 -o /tmp/tmp5y1fmret/reads_se_N6000_3.CT_GA.verified.sam /build/reproducible-path/seqan2-2.5.2/apps/bs_tools/tests/reads_se_N6000.CT_GA.sam /build/reproducible-path/seqan2-2.5.2/apps/bs_tools/tests/hg18_chr21_3000.fa /build/reproducible-path/seqan2-2.5.2/apps/bs_tools/tests/reads_se_N6000.fastq 386: OK 386: bisar -nse -nsi -nsd -gas -4.5 -ges -2.0 -der 0.001 -bsc 0.99 -gmr 0.8 -i 0.8 -rn 0.001 -pms 0.9 -e3 4 -e4 5 -o /tmp/tmp5y1fmret/reads_se_N6000_4.CT_GA.verified.sam /build/reproducible-path/seqan2-2.5.2/apps/bs_tools/tests/reads_se_N6000.CT_GA.sam /build/reproducible-path/seqan2-2.5.2/apps/bs_tools/tests/hg18_chr21_3000.fa /build/reproducible-path/seqan2-2.5.2/apps/bs_tools/tests/reads_se_N6000.fastq 386: OK 386: bisar -e3 4 -e4 5 -o /tmp/tmp5y1fmret/reads_pe_N6000_0.CT_GA.verified.sam /build/reproducible-path/seqan2-2.5.2/apps/bs_tools/tests/reads_pe_N6000.CT_GA.sam /build/reproducible-path/seqan2-2.5.2/apps/bs_tools/tests/hg18_chr21_3000.fa /build/reproducible-path/seqan2-2.5.2/apps/bs_tools/tests/reads_pe_N6000.L.fastq /build/reproducible-path/seqan2-2.5.2/apps/bs_tools/tests/reads_pe_N6000.R.fastq 386: OK 386: casbar -nec -mc 6 -msc 5 -mpc 0.5 -hes 0.005 -o /tmp/tmp5y1fmret/snps_se_0.vcf -b /tmp/tmp5y1fmret/meths_se_0.bed /build/reproducible-path/seqan2-2.5.2/apps/bs_tools/tests/hg18_chr21_3000.fa /build/reproducible-path/seqan2-2.5.2/apps/bs_tools/tests/reads_se_N6000_2.CT_GA.verified.pos_so.sam 386: OK 386: casbar -nec -mc 2 -msc 3 -mpc 0.5 -hes 0.005 -o /tmp/tmp5y1fmret/snps_se_1.vcf -b /tmp/tmp5y1fmret/meths_se_1.bed /build/reproducible-path/seqan2-2.5.2/apps/bs_tools/tests/hg18_chr21_3000.fa /build/reproducible-path/seqan2-2.5.2/apps/bs_tools/tests/reads_se_N6000_2.CT_GA.verified.pos_so.sam 386: OK 386: ============================== 386: total tests: 8 386: failed tests: 0 386: successful tests: 8 386: ============================== 403/411 Test #386: app_test_bs_tools ................................................................. Passed 14.66 sec test 411 Start 411: app_test_yara 411: Test command: /usr/bin/python3 "/build/reproducible-path/seqan2-2.5.2/apps/yara/tests/run_tests.py" "/build/reproducible-path/seqan2-2.5.2" "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu" 411: Working Directory: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/yara 411: Test timeout computed to be: 10000000 411: /build/reproducible-path/seqan2-2.5.2/apps/yara/tests/run_tests.py:25: SyntaxWarning: invalid escape sequence '\.' 411: app_tests.RegexpReplaceTransform("[0-9\.\-e]+ sec", "0.0 sec"), 410: DELETING TEMP DIR /tmp/tmpcvwin8wr 410: Executing test for tree_recomb 410: ============================== 410: 410: tree_recomb -m /build/reproducible-path/seqan2-2.5.2/apps/tree_recon/tests/example1.dist -o /tmp/tmpcvwin8wr/example1.dot OK 410: tree_recomb -m /build/reproducible-path/seqan2-2.5.2/apps/tree_recon/tests/example2.dist -o /tmp/tmpcvwin8wr/example2.dot OK 410: tree_recomb -m /build/reproducible-path/seqan2-2.5.2/apps/tree_recon/tests/example3.dist -o /tmp/tmpcvwin8wr/example3.dot OK 410: tree_recomb -b nj -m /build/reproducible-path/seqan2-2.5.2/apps/tree_recon/tests/example1.dist -o /tmp/tmpcvwin8wr/example1.nj.dot OK 410: tree_recomb -b min -m /build/reproducible-path/seqan2-2.5.2/apps/tree_recon/tests/example1.dist -o /tmp/tmpcvwin8wr/example1.min.dot OK 410: tree_recomb -b max -m /build/reproducible-path/seqan2-2.5.2/apps/tree_recon/tests/example1.dist -o /tmp/tmpcvwin8wr/example1.max.dot OK 410: tree_recomb -b wavg -m /build/reproducible-path/seqan2-2.5.2/apps/tree_recon/tests/example1.dist -o /tmp/tmpcvwin8wr/example1.wavg.dot OK 410: tree_recomb -b nj -m /build/reproducible-path/seqan2-2.5.2/apps/tree_recon/tests/example2.dist -o /tmp/tmpcvwin8wr/example2.nj.dot OK 410: tree_recomb -b min -m /build/reproducible-path/seqan2-2.5.2/apps/tree_recon/tests/example2.dist -o /tmp/tmpcvwin8wr/example2.min.dot OK 410: tree_recomb -b max -m /build/reproducible-path/seqan2-2.5.2/apps/tree_recon/tests/example2.dist -o /tmp/tmpcvwin8wr/example2.max.dot OK 410: tree_recomb -b avg -m /build/reproducible-path/seqan2-2.5.2/apps/tree_recon/tests/example2.dist -o /tmp/tmpcvwin8wr/example2.avg.dot OK 410: tree_recomb -b wavg -m /build/reproducible-path/seqan2-2.5.2/apps/tree_recon/tests/example2.dist -o /tmp/tmpcvwin8wr/example2.wavg.dot OK 410: tree_recomb -b nj -m /build/reproducible-path/seqan2-2.5.2/apps/tree_recon/tests/example3.dist -o /tmp/tmpcvwin8wr/example3.nj.dot OK 410: tree_recomb -b min -m /build/reproducible-path/seqan2-2.5.2/apps/tree_recon/tests/example3.dist -o /tmp/tmpcvwin8wr/example3.min.dot OK 410: tree_recomb -b max -m /build/reproducible-path/seqan2-2.5.2/apps/tree_recon/tests/example3.dist -o /tmp/tmpcvwin8wr/example3.max.dot OK 410: tree_recomb -b avg -m /build/reproducible-path/seqan2-2.5.2/apps/tree_recon/tests/example3.dist -o /tmp/tmpcvwin8wr/example3.avg.dot OK 410: tree_recomb -b wavg -m /build/reproducible-path/seqan2-2.5.2/apps/tree_recon/tests/example3.dist -o /tmp/tmpcvwin8wr/example3.wavg.dot OK 410: tree_recomb -m /build/reproducible-path/seqan2-2.5.2/apps/tree_recon/tests/example1.dist -o /tmp/tmpcvwin8wr/example1.dot OK 410: tree_recomb -m /build/reproducible-path/seqan2-2.5.2/apps/tree_recon/tests/example1.dist -o /tmp/tmpcvwin8wr/example1.newick OK 410: tree_recomb -m /build/reproducible-path/seqan2-2.5.2/apps/tree_recon/tests/example2.dist -o /tmp/tmpcvwin8wr/example2.dot OK 410: tree_recomb -m /build/reproducible-path/seqan2-2.5.2/apps/tree_recon/tests/example2.dist -o /tmp/tmpcvwin8wr/example2.newick OK 410: tree_recomb -m /build/reproducible-path/seqan2-2.5.2/apps/tree_recon/tests/example3.dist -o /tmp/tmpcvwin8wr/example3.dot OK 410: tree_recomb -m /build/reproducible-path/seqan2-2.5.2/apps/tree_recon/tests/example3.dist -o /tmp/tmpcvwin8wr/example3.newick OK 410: ============================== 410: total tests: 23 410: failed tests: 0 410: successful tests: 23 410: ============================== 404/411 Test #410: app_test_tree_recon ............................................................... Passed 0.22 sec 411: DELETING TEMP DIR /tmp/tmp_4079h9s 411: Executing test for Yara 411: ============================== 411: 411: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/yara_indexer /build/reproducible-path/seqan2-2.5.2/apps/yara/tests/input/adeno-genome.fa -o /tmp/tmp_4079h9s/adeno-genome OK 411: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/yara_mapper /build/reproducible-path/seqan2-2.5.2/apps/yara/tests/gold/adeno-genome /build/reproducible-path/seqan2-2.5.2/apps/yara/tests/input/adeno-reads_1.fa -o /tmp/tmp_4079h9s/adeno-reads_1.t1.sam --threads 1 OK 411: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/yara_mapper /build/reproducible-path/seqan2-2.5.2/apps/yara/tests/gold/adeno-genome /build/reproducible-path/seqan2-2.5.2/apps/yara/tests/input/adeno-reads_1.fa -o /tmp/tmp_4079h9s/adeno-reads_1.rec.t1.sam --threads 1 -sm record -s 10 OK 411: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/yara_mapper /build/reproducible-path/seqan2-2.5.2/apps/yara/tests/gold/adeno-genome /build/reproducible-path/seqan2-2.5.2/apps/yara/tests/input/adeno-reads_1.fa -o /tmp/tmp_4079h9s/adeno-reads_1.tag.t1.sam --threads 1 -sm tag -s 10 OK 411: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/yara_mapper /build/reproducible-path/seqan2-2.5.2/apps/yara/tests/gold/adeno-genome /build/reproducible-path/seqan2-2.5.2/apps/yara/tests/input/adeno-reads_1.fa -o /tmp/tmp_4079h9s/adeno-reads_1.as.rec.t1.sam --threads 1 -sm record -as -s 10 OK 411: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/yara_mapper /build/reproducible-path/seqan2-2.5.2/apps/yara/tests/gold/adeno-genome /build/reproducible-path/seqan2-2.5.2/apps/yara/tests/input/adeno-reads_1.fa -o /tmp/tmp_4079h9s/adeno-reads_1.as.tag.t1.sam --threads 1 -sm tag -as -s 10 OK 411: ============================== 411: total tests: 6 411: failed tests: 0 411: successful tests: 6 411: ============================== 405/411 Test #411: app_test_yara ..................................................................... Passed 0.30 sec 403: DELETING TEMP DIR /tmp/tmpf8n04p7z 403: Executing test for searchjoin 403: =========================== 403: 403: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/s4_join /build/reproducible-path/seqan2-2.5.2/apps/searchjoin/tests/geo_database.csv 0 -i geo -t 4 -sl 5 -o /tmp/tmpf8n04p7z/join_geo_0_5.out OK 403: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/s4_join /build/reproducible-path/seqan2-2.5.2/apps/searchjoin/tests/geo_database.csv 1 -i geo -t 4 -sl 5 -o /tmp/tmpf8n04p7z/join_geo_1_5.out OK 403: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/s4_join /build/reproducible-path/seqan2-2.5.2/apps/searchjoin/tests/geo_database.csv 3 -i geo -t 4 -sl 5 -o /tmp/tmpf8n04p7z/join_geo_3_5.out OK 403: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/s4_join /build/reproducible-path/seqan2-2.5.2/apps/searchjoin/tests/dna_database.csv 0 -i dna -t 4 -sl 10 -o /tmp/tmpf8n04p7z/join_dna_0_10.out OK 403: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/s4_join /build/reproducible-path/seqan2-2.5.2/apps/searchjoin/tests/dna_database.csv 8 -i dna -t 4 -sl 10 -o /tmp/tmpf8n04p7z/join_dna_8_10.out OK 403: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/s4_join /build/reproducible-path/seqan2-2.5.2/apps/searchjoin/tests/dna_database.csv 16 -i dna -t 4 -sl 10 -o /tmp/tmpf8n04p7z/join_dna_16_10.out OK 403: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/s4_search /build/reproducible-path/seqan2-2.5.2/apps/searchjoin/tests/geo_database.csv /build/reproducible-path/seqan2-2.5.2/apps/searchjoin/tests/geo_queries.csv --no-wait -i geo -t 4 -sl 5 -o /tmp/tmpf8n04p7z/search_geo_5.out OK 403: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/s4_search /build/reproducible-path/seqan2-2.5.2/apps/searchjoin/tests/dna_database.csv /build/reproducible-path/seqan2-2.5.2/apps/searchjoin/tests/dna_queries.csv --no-wait -i dna -t 4 -sl 10 -o /tmp/tmpf8n04p7z/search_dna_10.out OK 403: ============================== 403: total tests: 8 403: failed tests: 0 403: successful tests: 8 403: ============================== 406/411 Test #403: app_test_searchjoin ............................................................... Passed 8.24 sec 397: razers --low-memory -id /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_2.fa -o /tmp/tmpybxj6xdp/pe-adeno-reads100_2-id.razersDELETING TEMP DIR /tmp/tmpybxj6xdp 397: OK 397: razers --low-memory -id -r /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_2.fa -o /tmp/tmpybxj6xdp/pe-adeno-reads100_2-id-r.razers OK 397: razers --low-memory -id -f /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_2.fa -o /tmp/tmpybxj6xdp/pe-adeno-reads100_2-id-f.razers OK 397: razers --low-memory -id -i 90 /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_2.fa -o /tmp/tmpybxj6xdp/pe-adeno-reads100_2-id-i90.razers OK 397: razers --low-memory -id -i 91 /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_2.fa -o /tmp/tmpybxj6xdp/pe-adeno-reads100_2-id-i91.razers OK 397: razers --low-memory -id -i 92 /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_2.fa -o /tmp/tmpybxj6xdp/pe-adeno-reads100_2-id-i92.razers OK 397: razers --low-memory -id -i 93 /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_2.fa -o /tmp/tmpybxj6xdp/pe-adeno-reads100_2-id-i93.razers OK 397: razers --low-memory -id -i 94 /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_2.fa -o /tmp/tmpybxj6xdp/pe-adeno-reads100_2-id-i94.razers OK 397: razers --low-memory -id -i 95 /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_2.fa -o /tmp/tmpybxj6xdp/pe-adeno-reads100_2-id-i95.razers OK 397: razers --low-memory -id -i 96 /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_2.fa -o /tmp/tmpybxj6xdp/pe-adeno-reads100_2-id-i96.razers OK 397: razers --low-memory -id -i 97 /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_2.fa -o /tmp/tmpybxj6xdp/pe-adeno-reads100_2-id-i97.razers OK 397: razers --low-memory -id -i 98 /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_2.fa -o /tmp/tmpybxj6xdp/pe-adeno-reads100_2-id-i98.razers OK 397: razers --low-memory -id -i 99 /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_2.fa -o /tmp/tmpybxj6xdp/pe-adeno-reads100_2-id-i99.razers OK 397: razers --low-memory -id -i 100 /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_2.fa -o /tmp/tmpybxj6xdp/pe-adeno-reads100_2-id-i100.razers OK 397: razers --low-memory -id /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_2.fa -o /tmp/tmpybxj6xdp/pe-adeno-reads100_2-id-of0.razers OK 397: razers --low-memory -id /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_2.fa -o /tmp/tmpybxj6xdp/pe-adeno-reads100_2-id-of1.fa OK 397: razers --low-memory -id /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_2.fa -o /tmp/tmpybxj6xdp/pe-adeno-reads100_2-id-of2.eland OK 397: razers --low-memory -id /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_2.fa -o /tmp/tmpybxj6xdp/pe-adeno-reads100_2-id-of3.gff OK 397: razers --low-memory -id -so 0 /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_2.fa -o /tmp/tmpybxj6xdp/pe-adeno-reads100_2-id-so0.razers OK 397: razers --low-memory -id -so 1 /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-genome.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_1.fa /build/reproducible-path/seqan2-2.5.2/apps/razers/tests/adeno-reads100_2.fa -o /tmp/tmpybxj6xdp/pe-adeno-reads100_2-id-so1.razers OK 397: ============================== 397: total tests: 84 397: failed tests: 0 397: successful tests: 84 397: ============================== 407/411 Test #397: app_test_razers ................................................................... Passed 15.08 sec 409: Executing test for stellar 409: ========================= 409: 409: stellar -e 0.1 -l 50 -x 10 -k 7 -n 5000 -s 10000 -f -v -t -o /tmp/tmpym59oyc6/e-1.gff /build/reproducible-path/seqan2-2.5.2/apps/stellar/tests/512_simSeq1_e-1.fa /build/reproducible-path/seqan2-2.5.2/apps/stellar/tests/512_simSeq2_e-1.fa 409: OK 409: stellar -e 0.05 -l 50 -x 10 -k 7 -n 5000 -s 10000 -f -v -t -o /tmp/tmpym59oyc6/5e-2.gff /build/reproducible-path/seqan2-2.5.2/apps/stellar/tests/512_simSeq1_5e-2.fa /build/reproducible-path/seqan2-2.5.2/apps/stellar/tests/512_simSeq2_5e-2.fa 409: OK 409: stellar -e 0.025 -l 50 -x 10 -k 7 -n 5000 -s 10000 -f -v -t -o /tmp/tmpym59oyc6/25e-3.gff /build/reproducible-path/seqan2-2.5.2/apps/stellar/tests/512_simSeq1_25e-3.fa /build/reproducible-path/seqan2-2.5.2/apps/stellar/tests/512_simSeq2_25e-3.fa 409: OK 409: stellar -e 0.075 -l 50 -x 10 -k 7 -n 5000 -s 10000 -f -v -t -o /tmp/tmpym59oyc6/75e-3.gff /build/reproducible-path/seqan2-2.5.2/apps/stellar/tests/512_simSeq1_75e-3.fa /build/reproducible-path/seqan2-2.5.2/apps/stellar/tests/512_simSeq2_75e-3.fa 409: OK 409: stellar -e 0.0001 -l 50 -x 10 -k 7 -n 5000 -s 10000 -f -v -t -o /tmp/tmpym59oyc6/e-4.gff /build/reproducible-path/seqan2-2.5.2/apps/stellar/tests/512_simSeq1_e-4.fa /build/reproducible-path/seqan2-2.5.2/apps/stellar/tests/512_simSeq2_e-4.fa 409: OK 409: stellar -e 0.05 -l 20 -x 10 -k 7 -n 5000 -s 10000 -f -v -t -o /tmp/tmpym59oyc6/minLen20.gff /build/reproducible-path/seqan2-2.5.2/apps/stellar/tests/512_simSeq1_5e-2.fa /build/reproducible-path/seqan2-2.5.2/apps/stellar/tests/512_simSeq2_5e-2.fa 409: OK 409: stellar -e 0.05 -l 150 -x 10 -k 7 -n 5000 -s 10000 -f -v -t -o /tmp/tmpym59oyc6/minLen150.gff /build/reproducible-path/seqan2-2.5.2/apps/stellar/tests/512_simSeq1_5e-2.fa /build/reproducible-path/seqan2-2.5.2/apps/stellar/tests/512_simSeq2_5e-2.fa 409: OK 409: stellar -e 0.05 -l 50 -x 10 -k 7 -n 5000 -s 10000 -f -v -t -o /tmp/tmpym59oyc6/5e-2.txt /build/reproducible-path/seqan2-2.5.2/apps/stellar/tests/512_simSeq1_5e-2.fa /build/reproducible-path/seqan2-2.5.2/apps/stellar/tests/512_simSeq2_5e-2.fa 409: OK 409: ============================== 409: total tests: 8 409: failed tests: 0 409: successful tests: 8 409: ============================== 408/411 Test #409: app_test_stellar .................................................................. Passed 26.04 sec 387: DELETING TEMP DIR /tmp/tmpm0ud9u56 387: Executing test for dfi 387: ====================== 387: 387: dfi /tmp/tmpm0ud9u56/datasets/bbe.fa /tmp/tmpm0ud9u56/datasets/kjv.fa --support 0.002 --growth 5 -m OK 387: dfi /tmp/tmpm0ud9u56/datasets/bbe.fa /tmp/tmpm0ud9u56/datasets/kjv.fa --minmax 155 31102 --minmax 1 15551 -m OK 387: dfi /tmp/tmpm0ud9u56/datasets/CompWindows.fa /tmp/tmpm0ud9u56/datasets/CompNonWindows.fa --support 0.002 --growth 5 -m OK 387: dfi /tmp/tmpm0ud9u56/datasets/CompWindows.fa /tmp/tmpm0ud9u56/datasets/CompNonWindows.fa --minmax 10 2000 --minmax 1 1500 -m OK 387: dfi /tmp/tmpm0ud9u56/datasets/CompWindows.fa /tmp/tmpm0ud9u56/datasets/CompNonWindows.fa --support 0.0005 --growth 5 -m OK 387: dfi /tmp/tmpm0ud9u56/datasets/CompWindows.fa /tmp/tmpm0ud9u56/datasets/CompNonWindows.fa --support 0.001 --growth 5 -m OK 387: dfi /tmp/tmpm0ud9u56/datasets/CompWindows.fa /tmp/tmpm0ud9u56/datasets/CompNonWindows.fa --support 0.01 --growth 5 -m OK 387: dfi /tmp/tmpm0ud9u56/datasets/CompWindows.fa /tmp/tmpm0ud9u56/datasets/CompNonWindows.fa --support 0.1 --growth 5 -m OK 387: dfi /tmp/tmpm0ud9u56/datasets/CompWindows.fa /tmp/tmpm0ud9u56/datasets/CompNonWindows.fa --support 0.5 --growth 5 -m OK 387: dfi /tmp/tmpm0ud9u56/datasets/CompWindows.fa /tmp/tmpm0ud9u56/datasets/CompNonWindows.fa --support 0.9 --growth 5 -m OK 387: dfi /tmp/tmpm0ud9u56/datasets/CompWindows.fa /tmp/tmpm0ud9u56/datasets/CompNonWindows.fa --support 1 --growth 5 -m OK 387: dfi /tmp/tmpm0ud9u56/datasets/CompWindows.fa /tmp/tmpm0ud9u56/datasets/CompNonWindows.fa --support 0.002 --growth 1 -m OK 387: dfi /tmp/tmpm0ud9u56/datasets/CompWindows.fa /tmp/tmpm0ud9u56/datasets/CompNonWindows.fa --support 0.002 --growth 2 -m OK 387: dfi /tmp/tmpm0ud9u56/datasets/CompWindows.fa /tmp/tmpm0ud9u56/datasets/CompNonWindows.fa --support 0.002 --growth 5 -m OK 387: dfi /tmp/tmpm0ud9u56/datasets/fasta1.fa /tmp/tmpm0ud9u56/datasets/fasta2.fa --support 1 --growth 2 OK 387: ============================== 387: total tests: 15 387: failed tests: 0 387: successful tests: 15 387: ============================== 409/411 Test #387: app_test_dfi ...................................................................... Passed 49.84 sec 388: DELETING TEMP DIR /tmp/tmpoin6c_ns 388: Executing test for fiona 388: ======================== 388: 388: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/compute_gain -g /build/reproducible-path/seqan2-2.5.2/apps/fiona/tests/genome.10k.fa --pre /build/reproducible-path/seqan2-2.5.2/apps/fiona/tests/reads.illumina.sam --post /tmp/tmpoin6c_ns/reads.illumina.corrected.i1.fa 388: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/fiona_illumina -nt 1 -i 1 -g 10000 /build/reproducible-path/seqan2-2.5.2/apps/fiona/tests/reads.illumina.fq /tmp/tmpoin6c_ns/reads.illumina.corrected.i1.fa 388: OK 388: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/compute_gain -g /build/reproducible-path/seqan2-2.5.2/apps/fiona/tests/genome.10k.fa --pre /build/reproducible-path/seqan2-2.5.2/apps/fiona/tests/reads.illumina.sam --post /tmp/tmpoin6c_ns/reads.illumina.corrected.i2.fa 388: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/fiona_illumina -nt 1 -i 2 -g 10000 /build/reproducible-path/seqan2-2.5.2/apps/fiona/tests/reads.illumina.fq /tmp/tmpoin6c_ns/reads.illumina.corrected.i2.fa 388: OK 388: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/compute_gain -g /build/reproducible-path/seqan2-2.5.2/apps/fiona/tests/genome.10k.fa --pre /build/reproducible-path/seqan2-2.5.2/apps/fiona/tests/reads.454.sam --post /tmp/tmpoin6c_ns/reads.454.corrected.i1.fa 388: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/fiona -nt 1 -i 1 -g 10000 /build/reproducible-path/seqan2-2.5.2/apps/fiona/tests/reads.454.fq /tmp/tmpoin6c_ns/reads.454.corrected.i1.fa 388: OK 388: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/compute_gain -g /build/reproducible-path/seqan2-2.5.2/apps/fiona/tests/genome.10k.fa --pre /build/reproducible-path/seqan2-2.5.2/apps/fiona/tests/reads.454.sam --post /tmp/tmpoin6c_ns/reads.454.corrected.i2.fa 388: /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/bin/fiona -nt 1 -i 2 -g 10000 /build/reproducible-path/seqan2-2.5.2/apps/fiona/tests/reads.454.fq /tmp/tmpoin6c_ns/reads.454.corrected.i2.fa 388: OK 388: ============================== 388: total tests: 4 388: failed tests: 0 388: successful tests: 4 388: ============================== 410/411 Test #388: app_test_fiona .................................................................... Passed 56.68 sec 407: DELETING TEMP DIR /tmp/tmp_7bjo815 407: Executing test for snp_store 407: ========================= 407: 407: snp_store /build/reproducible-path/seqan2-2.5.2/apps/snp_store/tests/human-chr22-inf2.fa /build/reproducible-path/seqan2-2.5.2/apps/snp_store/tests/human-reads2.gff -o /tmp/tmp_7bjo815/snps_default.vcf -id /tmp/tmp_7bjo815/indels_default.gff OK 407: snp_store /build/reproducible-path/seqan2-2.5.2/apps/snp_store/tests/human-chr22-inf2.fa /build/reproducible-path/seqan2-2.5.2/apps/snp_store/tests/human-reads2.sam -re -o /tmp/tmp_7bjo815/snps_realign.vcf -id /tmp/tmp_7bjo815/indels_realign.gff OK 407: snp_store /build/reproducible-path/seqan2-2.5.2/apps/snp_store/tests/human-chr22-inf2.fa /build/reproducible-path/seqan2-2.5.2/apps/snp_store/tests/human-reads2.sam -it 1 -re -oa -mp 1 -m maq -hq -o /tmp/tmp_7bjo815/snps_realign_m1mp1oa.vcf -id /tmp/tmp_7bjo815/indels_realign_m1mp1oa.gff OK 407: snp_store /build/reproducible-path/seqan2-2.5.2/apps/snp_store/tests/human-chr22-inf2.fa /build/reproducible-path/seqan2-2.5.2/apps/snp_store/tests/human-reads2.gff -it 2 -re -oa -mp 1 -hq -o /tmp/tmp_7bjo815/snps_realign_m0mp1oa.vcf -id /tmp/tmp_7bjo815/indels_realign_m0mp1oa.gff OK 407: snp_store /build/reproducible-path/seqan2-2.5.2/apps/snp_store/tests/human-chr22-inf2.fa /build/reproducible-path/seqan2-2.5.2/apps/snp_store/tests/human-reads2.sam -it 1 -ipt 0.1 -osc -re -oa -hq -o /tmp/tmp_7bjo815/snps_realign_m0mp1oa_it1ipt01.vcf -id /tmp/tmp_7bjo815/indels_realign_m0mp1oa_it1ipt01.gff OK 407: ============================== 407: total tests: 5 407: failed tests: 0 407: successful tests: 5 407: ============================== 411/411 Test #407: app_test_snp_store ................................................................ Passed 51.64 sec 100% tests passed, 0 tests failed out of 411 Total Test time (real) = 72.10 sec make[1]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' rm -fr -- /tmp/dh-xdg-rundir-EGDhv2QX debian/rules execute_after_dh_auto_test make[1]: Entering directory '/build/reproducible-path/seqan2-2.5.2' cp debian/example.sam demos/tutorial/file_io_overview/example.sam make[1]: Leaving directory '/build/reproducible-path/seqan2-2.5.2' create-stamp debian/debhelper-build-stamp dh_prep -a rm -f -- debian/seqan-apps.substvars rm -fr -- debian/.debhelper/generated/seqan-apps/ debian/seqan-apps/ debian/tmp/ dh_auto_install -a install -m0755 -d /build/reproducible-path/seqan2-2.5.2/debian/tmp cd obj-aarch64-linux-gnu && make -j8 install DESTDIR=/build/reproducible-path/seqan2-2.5.2/debian/tmp AM_UPDATE_INFO_DIR=no INSTALL="install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/seqan2-2.5.2 -B/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/alf -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/alf/LICENSE -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/alf/README -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/alf/example/small.fasta -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/bisar -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/casbar -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/four2three -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/bs_tools/LICENSE -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/bs_tools/README -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/dfi -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/dfi/LICENSE -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/dfi/README -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/dfi/example/fasta1.fa -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/dfi/example/fasta2.fa -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/fiona -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/fiona_illumina -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/compute_gain -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/fiona/LICENSE -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/fiona/README -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/fiona/example/reads.fa -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/fx_bam_coverage -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/fx_tools/LICENSE -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/fx_tools/README -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/gustaf -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/gustaf_mate_joining -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/gustaf/LICENSE -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/gustaf/README -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/gustaf/example/adeno.fa -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/gustaf/example/adeno_modified.fa -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/gustaf/example/adeno_modified_reads.fa -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/gustaf/example/stellar.gff -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/insegt -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/insegt/LICENSE -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/insegt/README -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/insegt/example/annoOutput.gff -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/insegt/example/annotations.gff -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/insegt/example/readOutput.gff -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/insegt/example/tupleOutput.gff -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/mason_frag_sequencing -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/mason_genome -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/mason_materializer -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/mason_methylation -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/mason_simulator -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/mason_splicing -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/mason_variator -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/mason2/LICENSE -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/mason2/README -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/mason2/README.mason_frag_sequencing -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/mason2/README.mason_genome -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/mason2/README.mason_materializer -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/mason2/README.mason_methylation -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/mason2/README.mason_simulator -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/mason2/README.mason_splicing -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/mason2/README.mason_variator -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/mason2/example/adeno_virus.fa -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/micro_razers -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/micro_razers/LICENSE -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/micro_razers/README -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/micro_razers/example/genome.fa -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/micro_razers/example/reads.fa -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/micro_razers/example/reads.fa.result -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/bam2roi -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/roi_feature_projection -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/roi_plot_thumbnails -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/bed_sort.sh -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/gff_sort.sh -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/roi_sort.sh -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/roi_plot_9.sh -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/plot.awk -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/ps2pswLinks.gawk -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/ngs_roi/LICENSE -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/ngs_roi/README -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/ngs_roi/example/dmel.bed -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/ngs_roi/example/dmel.gtf -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/ngs_roi/example/example.bam -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/ngs_roi/R/ngsroi_0.1.tar.gz -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/ngs_roi/R/ngsroi_0.1.zip -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/pair_align -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/pair_align/LICENSE -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/pair_align/README -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/param_chooser -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/param_chooser/LICENSE -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/param_chooser/README -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/rabema_prepare_sam -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/rabema_build_gold_standard -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/rabema_evaluate -- Up-to-date: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/rabema_prepare_sam -- Up-to-date: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/rabema_build_gold_standard -- Up-to-date: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/rabema_evaluate -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/rabema/LICENSE -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/rabema/README -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/razers -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/razers/LICENSE -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/razers/README -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/razers/example/genome.fa -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/razers/example/reads.fa -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/razers/example/reads2.fa -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/razers3 -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/razers3/LICENSE -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/razers3/README -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/razers3/example/genome.fa -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/razers3/example/reads.fa -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/razers3/example/reads2.fa -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/rep_sep -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/rep_sep/LICENSE -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/rep_sep/README Change Dir: '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile sak_doc gmake[2]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/seqan2-2.5.2 -B/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/gmake -f CMakeFiles/Makefile2 sak_doc gmake[3]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/seqan2-2.5.2 -B/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/CMakeFiles 1 /usr/bin/gmake -f CMakeFiles/Makefile2 apps/sak/CMakeFiles/sak_doc.dir/all gmake[4]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' /usr/bin/gmake -f CMakeFiles/seqan_library.dir/build.make CMakeFiles/seqan_library.dir/depend gmake[5]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/CMakeFiles/seqan_library.dir/DependInfo.cmake "--color=" gmake[5]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' /usr/bin/gmake -f CMakeFiles/seqan_library.dir/build.make CMakeFiles/seqan_library.dir/build gmake[5]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' gmake[5]: Nothing to be done for 'CMakeFiles/seqan_library.dir/build'. gmake[5]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [ 0%] Built target seqan_library /usr/bin/gmake -f apps/sak/CMakeFiles/sak.dir/build.make apps/sak/CMakeFiles/sak.dir/depend gmake[5]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/sak /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/sak /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/sak/CMakeFiles/sak.dir/DependInfo.cmake "--color=" Dependencies file "apps/sak/CMakeFiles/sak.dir/sak.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/sak/CMakeFiles/sak.dir/compiler_depend.internal". Dependencies file "apps/sak/CMakeFiles/sak.dir/link.d" is newer than depends file "/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/sak/CMakeFiles/sak.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target sak gmake[5]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' /usr/bin/gmake -f apps/sak/CMakeFiles/sak.dir/build.make apps/sak/CMakeFiles/sak.dir/build gmake[5]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' gmake[5]: Nothing to be done for 'apps/sak/CMakeFiles/sak.dir/build'. gmake[5]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [100%] Built target sak /usr/bin/gmake -f apps/sak/CMakeFiles/sak_doc.dir/build.make apps/sak/CMakeFiles/sak_doc.dir/depend gmake[5]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan2-2.5.2 /build/reproducible-path/seqan2-2.5.2/apps/sak /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/sak /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/sak/CMakeFiles/sak_doc.dir/DependInfo.cmake "--color=" gmake[5]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' /usr/bin/gmake -f apps/sak/CMakeFiles/sak_doc.dir/build.make apps/sak/CMakeFiles/sak_doc.dir/build gmake[5]: Entering directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [100%] Generating README.sak.txt [100%] Generating sak.1 cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/sak && ../../bin/sak --export-help=txt > README.sak.txt cd /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/apps/sak && ../../bin/sak --export-help=man > sak.1 gmake[5]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' [100%] Built target sak_doc gmake[4]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu/CMakeFiles 0 gmake[3]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' gmake[2]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/sak -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/sak/LICENSE -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/sak/README -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/sak/README.sak.txt -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/man/man1/sak.1 -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/sam2matrix -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/sam2matrix/LICENSE -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/sam2matrix/README -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/samcat -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/samcat/LICENSE -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/samcat/README -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/s4_search -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/s4_join -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/searchjoin/LICENSE -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/searchjoin/README -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/seqan_tcoffee -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/seqan_tcoffee/LICENSE -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/seqan_tcoffee/README -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/seqan_tcoffee/example/seq.fa -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/seqcons2 -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/seqcons2/LICENSE -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/seqcons2/README -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/sgip -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/sgip/LICENSE -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/sgip/README -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/sgip/example/iso_m2D_m196.A01 -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/sgip/example/iso_r01_m200.A00 -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/sgip/example/iso_r01_m200.A01 -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/sgip/example/iso_r01_m200.B00 -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/sgip/example/iso_r01_m200.B01 -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/sgip/example/latin-4 -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/sgip/example/lattice-4 -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/sgip/example/sts-7 -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/snp_store -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/snp_store/LICENSE -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/snp_store/README -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/snp_store/example/exampleGenome.fa -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/snp_store/example/exampleReads.gff -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/splazers -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/splazers/LICENSE -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/splazers/README -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/splazers/example/genome.fa -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/splazers/example/reads.fa -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/splazers/example/reads.fa.result -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/stellar -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/stellar/LICENSE -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/stellar/README -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/stellar/example/NC_001474.fasta -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/stellar/example/NC_001477.fasta -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/stellar/example/reads.fasta -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/tree_recon -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/tree_recon/LICENSE -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/tree_recon/README -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/tree_recon/example/example.dist -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/yara_indexer -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/bin/yara_mapper -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/yara/LICENSE -- Installing: /build/reproducible-path/seqan2-2.5.2/debian/tmp/usr/share/doc/yara/README.rst make[1]: Leaving directory '/build/reproducible-path/seqan2-2.5.2/obj-aarch64-linux-gnu' dh_install -a install -m0755 -d debian/seqan-apps/usr/lib/seqan cp --reflink=auto -a debian/tmp/usr/bin debian/seqan-apps/usr/lib/seqan/ install -m0755 -d debian/seqan-apps/usr/share/doc/seqan-apps cp --reflink=auto -a debian/tmp/usr/share/doc/alf debian/tmp/usr/share/doc/bs_tools debian/tmp/usr/share/doc/dfi debian/tmp/usr/share/doc/fiona debian/tmp/usr/share/doc/fx_tools debian/tmp/usr/share/doc/gustaf debian/tmp/usr/share/doc/insegt debian/tmp/usr/share/doc/mason2 debian/tmp/usr/share/doc/micro_razers debian/tmp/usr/share/doc/ngs_roi debian/tmp/usr/share/doc/pair_align debian/tmp/usr/share/doc/param_chooser debian/tmp/usr/share/doc/rabema debian/tmp/usr/share/doc/razers debian/tmp/usr/share/doc/razers3 debian/tmp/usr/share/doc/rep_sep debian/tmp/usr/share/doc/sak debian/tmp/usr/share/doc/sam2matrix debian/tmp/usr/share/doc/samcat debian/tmp/usr/share/doc/searchjoin debian/tmp/usr/share/doc/seqan_tcoffee debian/tmp/usr/share/doc/seqcons2 debian/tmp/usr/share/doc/sgip debian/tmp/usr/share/doc/snp_store debian/tmp/usr/share/doc/splazers debian/tmp/usr/share/doc/stellar debian/tmp/usr/share/doc/tree_recon debian/tmp/usr/share/doc/yara debian/seqan-apps/usr/share/doc/seqan-apps/ debian/rules execute_after_dh_install-arch make[1]: Entering directory '/build/reproducible-path/seqan2-2.5.2' # Delete additional LICENSE files find /build/reproducible-path/seqan2-2.5.2/debian/seqan-apps -type f -name LICENSE -delete || /bin/true find /build/reproducible-path/seqan2-2.5.2/debian/seqan-apps/usr/lib/seqan/bin -type f \ -name "*.sh" | xargs chmod a+x make[1]: Leaving directory '/build/reproducible-path/seqan2-2.5.2' dh_installdocs -a install -p -m0644 debian/README.Debian debian/seqan-apps/usr/share/doc/seqan-apps/README.Debian install -p -m0644 debian/copyright debian/seqan-apps/usr/share/doc/seqan-apps/copyright dh_installchangelogs -a install -m0755 -d debian/seqan-apps/usr/share/doc/seqan-apps install -p -m0644 debian/.debhelper/generated/seqan-apps/dh_installchangelogs.dch.trimmed debian/seqan-apps/usr/share/doc/seqan-apps/changelog.Debian install -p -m0644 ./CHANGELOG.md debian/seqan-apps/usr/share/doc/seqan-apps/changelog debian/rules execute_before_dh_installman-arch make[1]: Entering directory '/build/reproducible-path/seqan2-2.5.2' dh_link --arch install -m0755 -d debian/seqan-apps/usr/bin rm -f debian/seqan-apps/usr/bin/yara_mapper ln -s ../lib/seqan/bin/yara_mapper debian/seqan-apps/usr/bin/yara_mapper install -m0755 -d debian/seqan-apps/usr/bin rm -f debian/seqan-apps/usr/bin/yara_indexer ln -s ../lib/seqan/bin/yara_indexer debian/seqan-apps/usr/bin/yara_indexer install -m0755 -d debian/seqan-apps/usr/bin rm -f debian/seqan-apps/usr/bin/tree_recon ln -s ../lib/seqan/bin/tree_recon debian/seqan-apps/usr/bin/tree_recon install -m0755 -d debian/seqan-apps/usr/bin rm -f debian/seqan-apps/usr/bin/stellar ln -s ../lib/seqan/bin/stellar debian/seqan-apps/usr/bin/stellar install -m0755 -d debian/seqan-apps/usr/bin rm -f debian/seqan-apps/usr/bin/splazers ln -s ../lib/seqan/bin/splazers debian/seqan-apps/usr/bin/splazers install -m0755 -d debian/seqan-apps/usr/bin rm -f debian/seqan-apps/usr/bin/snp_store ln -s ../lib/seqan/bin/snp_store debian/seqan-apps/usr/bin/snp_store install -m0755 -d debian/seqan-apps/usr/bin rm -f debian/seqan-apps/usr/bin/seqan_tcoffee ln -s ../lib/seqan/bin/seqan_tcoffee debian/seqan-apps/usr/bin/seqan_tcoffee install -m0755 -d debian/seqan-apps/usr/bin rm -f debian/seqan-apps/usr/bin/sak ln -s ../lib/seqan/bin/sak debian/seqan-apps/usr/bin/sak install -m0755 -d debian/seqan-apps/usr/bin rm -f debian/seqan-apps/usr/bin/razers3 ln -s ../lib/seqan/bin/razers3 debian/seqan-apps/usr/bin/razers3 install -m0755 -d debian/seqan-apps/usr/bin rm -f debian/seqan-apps/usr/bin/razers ln -s ../lib/seqan/bin/razers debian/seqan-apps/usr/bin/razers install -m0755 -d debian/seqan-apps/usr/bin rm -f debian/seqan-apps/usr/bin/rabema_prepare_sam ln -s ../lib/seqan/bin/rabema_prepare_sam debian/seqan-apps/usr/bin/rabema_prepare_sam install -m0755 -d debian/seqan-apps/usr/bin rm -f debian/seqan-apps/usr/bin/rabema_evaluate ln -s ../lib/seqan/bin/rabema_evaluate debian/seqan-apps/usr/bin/rabema_evaluate install -m0755 -d debian/seqan-apps/usr/bin rm -f debian/seqan-apps/usr/bin/rabema_build_gold_standard ln -s ../lib/seqan/bin/rabema_build_gold_standard debian/seqan-apps/usr/bin/rabema_build_gold_standard install -m0755 -d debian/seqan-apps/usr/bin rm -f debian/seqan-apps/usr/bin/pair_align ln -s ../lib/seqan/bin/pair_align debian/seqan-apps/usr/bin/pair_align install -m0755 -d debian/seqan-apps/usr/bin rm -f debian/seqan-apps/usr/bin/micro_razers ln -s ../lib/seqan/bin/micro_razers debian/seqan-apps/usr/bin/micro_razers install -m0755 -d debian/seqan-apps/usr/bin rm -f debian/seqan-apps/usr/bin/mason_methylation ln -s ../lib/seqan/bin/mason_methylation debian/seqan-apps/usr/bin/mason_methylation install -m0755 -d debian/seqan-apps/usr/bin rm -f debian/seqan-apps/usr/bin/mason_materializer ln -s ../lib/seqan/bin/mason_materializer debian/seqan-apps/usr/bin/mason_materializer install -m0755 -d debian/seqan-apps/usr/bin rm -f debian/seqan-apps/usr/bin/mason_genome ln -s ../lib/seqan/bin/mason_genome debian/seqan-apps/usr/bin/mason_genome install -m0755 -d debian/seqan-apps/usr/bin rm -f debian/seqan-apps/usr/bin/mason_frag_sequencing ln -s ../lib/seqan/bin/mason_frag_sequencing debian/seqan-apps/usr/bin/mason_frag_sequencing install -m0755 -d debian/seqan-apps/usr/bin rm -f debian/seqan-apps/usr/bin/insegt ln -s ../lib/seqan/bin/insegt debian/seqan-apps/usr/bin/insegt install -m0755 -d debian/seqan-apps/usr/bin rm -f debian/seqan-apps/usr/bin/gustaf ln -s ../lib/seqan/bin/gustaf debian/seqan-apps/usr/bin/gustaf install -m0755 -d debian/seqan-apps/usr/bin rm -f debian/seqan-apps/usr/bin/alf ln -s ../lib/seqan/bin/alf debian/seqan-apps/usr/bin/alf if [ -d /build/reproducible-path/seqan2-2.5.2/debian/seqan-apps/usr/bin ] ; then \ find /build/reproducible-path/seqan2-2.5.2/debian/seqan-apps/usr/bin -type l -xtype l -delete ; \ fi /build/reproducible-path/seqan2-2.5.2/debian/generate_manpages make[1]: Leaving directory '/build/reproducible-path/seqan2-2.5.2' dh_installman -a install -m0755 -d debian/seqan-apps/usr/share/man/man1/ install -p -m0644 debian/tmp/usr/share/man/man1/sak.1 debian/seqan-apps/usr/share/man/man1/sak.1 man-recode --to-code UTF-8 --suffix .dh-new debian/seqan-apps/usr/share/man/man1/alf.1 debian/seqan-apps/usr/share/man/man1/gustaf.1 debian/seqan-apps/usr/share/man/man1/insegt.1 man-recode --to-code UTF-8 --suffix .dh-new debian/seqan-apps/usr/share/man/man1/rabema_build_gold_standard.1 debian/seqan-apps/usr/share/man/man1/rabema_evaluate.1 debian/seqan-apps/usr/share/man/man1/rabema_prepare_sam.1 man-recode --to-code UTF-8 --suffix .dh-new debian/seqan-apps/usr/share/man/man1/seqan_tcoffee.1 debian/seqan-apps/usr/share/man/man1/snp_store.1 debian/seqan-apps/usr/share/man/man1/splazers.1 man-recode --to-code UTF-8 --suffix .dh-new debian/seqan-apps/usr/share/man/man1/stellar.1 debian/seqan-apps/usr/share/man/man1/tree_recon.1 debian/seqan-apps/usr/share/man/man1/yara_indexer.1 man-recode --to-code UTF-8 --suffix .dh-new debian/seqan-apps/usr/share/man/man1/yara_mapper.1 man-recode --to-code UTF-8 --suffix .dh-new debian/seqan-apps/usr/share/man/man1/mason_frag_sequencing.1 debian/seqan-apps/usr/share/man/man1/mason_genome.1 debian/seqan-apps/usr/share/man/man1/mason_materializer.1 man-recode --to-code UTF-8 --suffix .dh-new debian/seqan-apps/usr/share/man/man1/mason_methylation.1 debian/seqan-apps/usr/share/man/man1/micro_razers.1 debian/seqan-apps/usr/share/man/man1/pair_align.1 man-recode --to-code UTF-8 --suffix .dh-new debian/seqan-apps/usr/share/man/man1/razers.1 debian/seqan-apps/usr/share/man/man1/razers3.1 debian/seqan-apps/usr/share/man/man1/sak.1 mv debian/seqan-apps/usr/share/man/man1/yara_mapper.1.dh-new debian/seqan-apps/usr/share/man/man1/yara_mapper.1 chmod 0644 -- debian/seqan-apps/usr/share/man/man1/yara_mapper.1 mv debian/seqan-apps/usr/share/man/man1/alf.1.dh-new debian/seqan-apps/usr/share/man/man1/alf.1 mv debian/seqan-apps/usr/share/man/man1/gustaf.1.dh-new debian/seqan-apps/usr/share/man/man1/gustaf.1 mv debian/seqan-apps/usr/share/man/man1/insegt.1.dh-new debian/seqan-apps/usr/share/man/man1/insegt.1 chmod 0644 -- debian/seqan-apps/usr/share/man/man1/alf.1 debian/seqan-apps/usr/share/man/man1/gustaf.1 debian/seqan-apps/usr/share/man/man1/insegt.1 mv debian/seqan-apps/usr/share/man/man1/stellar.1.dh-new debian/seqan-apps/usr/share/man/man1/stellar.1 mv debian/seqan-apps/usr/share/man/man1/tree_recon.1.dh-new debian/seqan-apps/usr/share/man/man1/tree_recon.1 mv debian/seqan-apps/usr/share/man/man1/yara_indexer.1.dh-new debian/seqan-apps/usr/share/man/man1/yara_indexer.1 chmod 0644 -- debian/seqan-apps/usr/share/man/man1/stellar.1 debian/seqan-apps/usr/share/man/man1/tree_recon.1 debian/seqan-apps/usr/share/man/man1/yara_indexer.1 mv debian/seqan-apps/usr/share/man/man1/mason_methylation.1.dh-new debian/seqan-apps/usr/share/man/man1/mason_methylation.1 mv debian/seqan-apps/usr/share/man/man1/micro_razers.1.dh-new debian/seqan-apps/usr/share/man/man1/micro_razers.1 mv debian/seqan-apps/usr/share/man/man1/pair_align.1.dh-new debian/seqan-apps/usr/share/man/man1/pair_align.1 chmod 0644 -- debian/seqan-apps/usr/share/man/man1/mason_methylation.1 debian/seqan-apps/usr/share/man/man1/micro_razers.1 debian/seqan-apps/usr/share/man/man1/pair_align.1 mv debian/seqan-apps/usr/share/man/man1/mason_frag_sequencing.1.dh-new debian/seqan-apps/usr/share/man/man1/mason_frag_sequencing.1 mv debian/seqan-apps/usr/share/man/man1/mason_genome.1.dh-new debian/seqan-apps/usr/share/man/man1/mason_genome.1 mv debian/seqan-apps/usr/share/man/man1/mason_materializer.1.dh-new debian/seqan-apps/usr/share/man/man1/mason_materializer.1 chmod 0644 -- debian/seqan-apps/usr/share/man/man1/mason_frag_sequencing.1 debian/seqan-apps/usr/share/man/man1/mason_genome.1 debian/seqan-apps/usr/share/man/man1/mason_materializer.1 mv debian/seqan-apps/usr/share/man/man1/seqan_tcoffee.1.dh-new debian/seqan-apps/usr/share/man/man1/seqan_tcoffee.1 mv debian/seqan-apps/usr/share/man/man1/snp_store.1.dh-new debian/seqan-apps/usr/share/man/man1/snp_store.1 mv debian/seqan-apps/usr/share/man/man1/splazers.1.dh-new debian/seqan-apps/usr/share/man/man1/splazers.1 chmod 0644 -- debian/seqan-apps/usr/share/man/man1/seqan_tcoffee.1 debian/seqan-apps/usr/share/man/man1/snp_store.1 debian/seqan-apps/usr/share/man/man1/splazers.1 mv debian/seqan-apps/usr/share/man/man1/razers.1.dh-new debian/seqan-apps/usr/share/man/man1/razers.1 mv debian/seqan-apps/usr/share/man/man1/razers3.1.dh-new debian/seqan-apps/usr/share/man/man1/razers3.1 mv debian/seqan-apps/usr/share/man/man1/sak.1.dh-new debian/seqan-apps/usr/share/man/man1/sak.1 chmod 0644 -- debian/seqan-apps/usr/share/man/man1/razers.1 debian/seqan-apps/usr/share/man/man1/razers3.1 debian/seqan-apps/usr/share/man/man1/sak.1 mv debian/seqan-apps/usr/share/man/man1/rabema_build_gold_standard.1.dh-new debian/seqan-apps/usr/share/man/man1/rabema_build_gold_standard.1 mv debian/seqan-apps/usr/share/man/man1/rabema_evaluate.1.dh-new debian/seqan-apps/usr/share/man/man1/rabema_evaluate.1 mv debian/seqan-apps/usr/share/man/man1/rabema_prepare_sam.1.dh-new debian/seqan-apps/usr/share/man/man1/rabema_prepare_sam.1 chmod 0644 -- debian/seqan-apps/usr/share/man/man1/rabema_build_gold_standard.1 debian/seqan-apps/usr/share/man/man1/rabema_evaluate.1 debian/seqan-apps/usr/share/man/man1/rabema_prepare_sam.1 dh_perl -a dh_link -a rm -f debian/seqan-apps/usr/bin/gustaf ln -s ../lib/seqan/bin/gustaf debian/seqan-apps/usr/bin/gustaf rm -f debian/seqan-apps/usr/bin/mason_frag_sequencing ln -s ../lib/seqan/bin/mason_frag_sequencing debian/seqan-apps/usr/bin/mason_frag_sequencing rm -f debian/seqan-apps/usr/bin/micro_razers ln -s ../lib/seqan/bin/micro_razers debian/seqan-apps/usr/bin/micro_razers rm -f debian/seqan-apps/usr/bin/alf ln -s ../lib/seqan/bin/alf debian/seqan-apps/usr/bin/alf rm -f debian/seqan-apps/usr/bin/tree_recon ln -s ../lib/seqan/bin/tree_recon debian/seqan-apps/usr/bin/tree_recon rm -f debian/seqan-apps/usr/bin/rabema_build_gold_standard ln -s ../lib/seqan/bin/rabema_build_gold_standard debian/seqan-apps/usr/bin/rabema_build_gold_standard rm -f debian/seqan-apps/usr/bin/yara_indexer ln -s ../lib/seqan/bin/yara_indexer debian/seqan-apps/usr/bin/yara_indexer rm -f debian/seqan-apps/usr/bin/yara_mapper ln -s ../lib/seqan/bin/yara_mapper debian/seqan-apps/usr/bin/yara_mapper rm -f debian/seqan-apps/usr/bin/snp_store ln -s ../lib/seqan/bin/snp_store debian/seqan-apps/usr/bin/snp_store rm -f debian/seqan-apps/usr/bin/mason_genome ln -s ../lib/seqan/bin/mason_genome debian/seqan-apps/usr/bin/mason_genome rm -f debian/seqan-apps/usr/bin/razers3 ln -s ../lib/seqan/bin/razers3 debian/seqan-apps/usr/bin/razers3 rm -f debian/seqan-apps/usr/bin/pair_align ln -s ../lib/seqan/bin/pair_align debian/seqan-apps/usr/bin/pair_align rm -f debian/seqan-apps/usr/bin/rabema_prepare_sam ln -s ../lib/seqan/bin/rabema_prepare_sam debian/seqan-apps/usr/bin/rabema_prepare_sam rm -f debian/seqan-apps/usr/bin/stellar ln -s ../lib/seqan/bin/stellar debian/seqan-apps/usr/bin/stellar rm -f debian/seqan-apps/usr/bin/insegt ln -s ../lib/seqan/bin/insegt debian/seqan-apps/usr/bin/insegt rm -f debian/seqan-apps/usr/bin/razers ln -s ../lib/seqan/bin/razers debian/seqan-apps/usr/bin/razers rm -f debian/seqan-apps/usr/bin/sak ln -s ../lib/seqan/bin/sak debian/seqan-apps/usr/bin/sak rm -f debian/seqan-apps/usr/bin/mason_methylation ln -s ../lib/seqan/bin/mason_methylation debian/seqan-apps/usr/bin/mason_methylation rm -f debian/seqan-apps/usr/bin/splazers ln -s ../lib/seqan/bin/splazers debian/seqan-apps/usr/bin/splazers rm -f debian/seqan-apps/usr/bin/rabema_evaluate ln -s ../lib/seqan/bin/rabema_evaluate debian/seqan-apps/usr/bin/rabema_evaluate rm -f debian/seqan-apps/usr/bin/mason_materializer ln -s ../lib/seqan/bin/mason_materializer debian/seqan-apps/usr/bin/mason_materializer rm -f debian/seqan-apps/usr/bin/seqan_tcoffee ln -s ../lib/seqan/bin/seqan_tcoffee debian/seqan-apps/usr/bin/seqan_tcoffee rm -f debian/seqan-apps/usr/bin/yara_mapper ln -s ../lib/seqan/bin/yara_mapper debian/seqan-apps/usr/bin/yara_mapper rm -f debian/seqan-apps/usr/bin/yara_indexer ln -s ../lib/seqan/bin/yara_indexer debian/seqan-apps/usr/bin/yara_indexer rm -f debian/seqan-apps/usr/bin/tree_recon ln -s ../lib/seqan/bin/tree_recon debian/seqan-apps/usr/bin/tree_recon rm -f debian/seqan-apps/usr/bin/stellar ln -s ../lib/seqan/bin/stellar debian/seqan-apps/usr/bin/stellar rm -f debian/seqan-apps/usr/bin/splazers ln -s ../lib/seqan/bin/splazers debian/seqan-apps/usr/bin/splazers rm -f debian/seqan-apps/usr/bin/snp_store ln -s ../lib/seqan/bin/snp_store debian/seqan-apps/usr/bin/snp_store rm -f debian/seqan-apps/usr/bin/seqan_tcoffee ln -s ../lib/seqan/bin/seqan_tcoffee debian/seqan-apps/usr/bin/seqan_tcoffee rm -f debian/seqan-apps/usr/bin/sak ln -s ../lib/seqan/bin/sak debian/seqan-apps/usr/bin/sak rm -f debian/seqan-apps/usr/bin/razers3 ln -s ../lib/seqan/bin/razers3 debian/seqan-apps/usr/bin/razers3 rm -f debian/seqan-apps/usr/bin/razers ln -s ../lib/seqan/bin/razers debian/seqan-apps/usr/bin/razers rm -f debian/seqan-apps/usr/bin/rabema_prepare_sam ln -s ../lib/seqan/bin/rabema_prepare_sam debian/seqan-apps/usr/bin/rabema_prepare_sam rm -f debian/seqan-apps/usr/bin/rabema_evaluate ln -s ../lib/seqan/bin/rabema_evaluate debian/seqan-apps/usr/bin/rabema_evaluate rm -f debian/seqan-apps/usr/bin/rabema_build_gold_standard ln -s ../lib/seqan/bin/rabema_build_gold_standard debian/seqan-apps/usr/bin/rabema_build_gold_standard rm -f debian/seqan-apps/usr/bin/pair_align ln -s ../lib/seqan/bin/pair_align debian/seqan-apps/usr/bin/pair_align rm -f debian/seqan-apps/usr/bin/micro_razers ln -s ../lib/seqan/bin/micro_razers debian/seqan-apps/usr/bin/micro_razers rm -f debian/seqan-apps/usr/bin/mason_methylation ln -s ../lib/seqan/bin/mason_methylation debian/seqan-apps/usr/bin/mason_methylation rm -f debian/seqan-apps/usr/bin/mason_materializer ln -s ../lib/seqan/bin/mason_materializer debian/seqan-apps/usr/bin/mason_materializer rm -f debian/seqan-apps/usr/bin/mason_genome ln -s ../lib/seqan/bin/mason_genome debian/seqan-apps/usr/bin/mason_genome rm -f debian/seqan-apps/usr/bin/mason_frag_sequencing ln -s ../lib/seqan/bin/mason_frag_sequencing debian/seqan-apps/usr/bin/mason_frag_sequencing rm -f debian/seqan-apps/usr/bin/insegt ln -s ../lib/seqan/bin/insegt debian/seqan-apps/usr/bin/insegt rm -f debian/seqan-apps/usr/bin/gustaf ln -s ../lib/seqan/bin/gustaf debian/seqan-apps/usr/bin/gustaf rm -f debian/seqan-apps/usr/bin/alf ln -s ../lib/seqan/bin/alf debian/seqan-apps/usr/bin/alf rm -f debian/seqan-apps.debhelper.log debian/rules execute_after_dh_link-arch make[1]: Entering directory '/build/reproducible-path/seqan2-2.5.2' # Some binaries (eg. splazer) are not built in 32-bit architectures so # remove their (broken) symlinks. if [ -d /build/reproducible-path/seqan2-2.5.2/debian/seqan-apps/usr/bin ] ; then \ find /build/reproducible-path/seqan2-2.5.2/debian/seqan-apps/usr/bin -type l -xtype l -delete ; \ fi make[1]: Leaving directory '/build/reproducible-path/seqan2-2.5.2' dh_strip_nondeterminism -a Using 1767948346 as canonical time Normalizing debian/seqan-apps/usr/share/doc/seqan-apps/ngs_roi/R/ngsroi_0.1.tar.gz using File::StripNondeterminism::handlers::gzip Normalizing debian/seqan-apps/usr/share/doc/seqan-apps/ngs_roi/R/ngsroi_0.1.zip using File::StripNondeterminism::handlers::zip dh_compress -a cd debian/seqan-apps chmod a-x usr/share/doc/seqan-apps/alf/README usr/share/doc/seqan-apps/changelog usr/share/doc/seqan-apps/changelog.Debian usr/share/doc/seqan-apps/dfi/README usr/share/doc/seqan-apps/fiona/example/reads.fa usr/share/doc/seqan-apps/gustaf/README usr/share/doc/seqan-apps/gustaf/example/adeno.fa usr/share/doc/seqan-apps/gustaf/example/adeno_modified.fa usr/share/doc/seqan-apps/insegt/README usr/share/doc/seqan-apps/mason2/README.mason_methylation usr/share/doc/seqan-apps/mason2/README.mason_simulator usr/share/doc/seqan-apps/mason2/README.mason_variator usr/share/doc/seqan-apps/mason2/example/adeno_virus.fa usr/share/doc/seqan-apps/micro_razers/README usr/share/doc/seqan-apps/ngs_roi/README usr/share/doc/seqan-apps/ngs_roi/example/dmel.bed usr/share/doc/seqan-apps/ngs_roi/example/dmel.gtf usr/share/doc/seqan-apps/ngs_roi/example/example.bam usr/share/doc/seqan-apps/rabema/README usr/share/doc/seqan-apps/razers/README usr/share/doc/seqan-apps/razers3/README usr/share/doc/seqan-apps/sgip/example/iso_r01_m200.A00 usr/share/doc/seqan-apps/sgip/example/iso_r01_m200.A01 usr/share/doc/seqan-apps/sgip/example/iso_r01_m200.B00 usr/share/doc/seqan-apps/sgip/example/iso_r01_m200.B01 usr/share/doc/seqan-apps/snp_store/README usr/share/doc/seqan-apps/snp_store/example/exampleGenome.fa usr/share/doc/seqan-apps/splazers/README usr/share/doc/seqan-apps/stellar/README usr/share/doc/seqan-apps/stellar/example/NC_001474.fasta usr/share/doc/seqan-apps/stellar/example/NC_001477.fasta usr/share/doc/seqan-apps/yara/README.rst usr/share/man/man1/alf.1 usr/share/man/man1/gustaf.1 usr/share/man/man1/insegt.1 usr/share/man/man1/mason_frag_sequencing.1 usr/share/man/man1/mason_genome.1 usr/share/man/man1/mason_materializer.1 usr/share/man/man1/mason_methylation.1 usr/share/man/man1/micro_razers.1 usr/share/man/man1/pair_align.1 usr/share/man/man1/rabema_build_gold_standard.1 usr/share/man/man1/rabema_evaluate.1 usr/share/man/man1/rabema_prepare_sam.1 usr/share/man/man1/razers.1 usr/share/man/man1/razers3.1 usr/share/man/man1/sak.1 usr/share/man/man1/seqan_tcoffee.1 usr/share/man/man1/snp_store.1 usr/share/man/man1/splazers.1 usr/share/man/man1/stellar.1 usr/share/man/man1/tree_recon.1 usr/share/man/man1/yara_indexer.1 usr/share/man/man1/yara_mapper.1 gzip -9nf usr/share/doc/seqan-apps/alf/README usr/share/doc/seqan-apps/changelog usr/share/doc/seqan-apps/changelog.Debian usr/share/doc/seqan-apps/dfi/README usr/share/doc/seqan-apps/fiona/example/reads.fa usr/share/doc/seqan-apps/gustaf/README usr/share/doc/seqan-apps/gustaf/example/adeno.fa usr/share/doc/seqan-apps/gustaf/example/adeno_modified.fa usr/share/doc/seqan-apps/insegt/README usr/share/doc/seqan-apps/mason2/README.mason_methylation usr/share/doc/seqan-apps/mason2/README.mason_simulator usr/share/doc/seqan-apps/mason2/README.mason_variator usr/share/doc/seqan-apps/mason2/example/adeno_virus.fa usr/share/doc/seqan-apps/micro_razers/README usr/share/doc/seqan-apps/ngs_roi/README usr/share/doc/seqan-apps/ngs_roi/example/dmel.bed usr/share/doc/seqan-apps/ngs_roi/example/dmel.gtf usr/share/doc/seqan-apps/ngs_roi/example/example.bam usr/share/doc/seqan-apps/rabema/README usr/share/doc/seqan-apps/razers/README usr/share/doc/seqan-apps/razers3/README usr/share/doc/seqan-apps/sgip/example/iso_r01_m200.A00 usr/share/doc/seqan-apps/sgip/example/iso_r01_m200.A01 usr/share/doc/seqan-apps/sgip/example/iso_r01_m200.B00 usr/share/doc/seqan-apps/sgip/example/iso_r01_m200.B01 usr/share/doc/seqan-apps/snp_store/README usr/share/doc/seqan-apps/snp_store/example/exampleGenome.fa usr/share/doc/seqan-apps/splazers/README usr/share/doc/seqan-apps/stellar/README usr/share/doc/seqan-apps/stellar/example/NC_001474.fasta usr/share/doc/seqan-apps/stellar/example/NC_001477.fasta usr/share/doc/seqan-apps/yara/README.rst usr/share/man/man1/alf.1 usr/share/man/man1/gustaf.1 usr/share/man/man1/insegt.1 usr/share/man/man1/mason_frag_sequencing.1 usr/share/man/man1/mason_genome.1 usr/share/man/man1/mason_materializer.1 usr/share/man/man1/mason_methylation.1 usr/share/man/man1/micro_razers.1 usr/share/man/man1/pair_align.1 usr/share/man/man1/rabema_build_gold_standard.1 usr/share/man/man1/rabema_evaluate.1 usr/share/man/man1/rabema_prepare_sam.1 usr/share/man/man1/razers.1 usr/share/man/man1/razers3.1 usr/share/man/man1/sak.1 usr/share/man/man1/seqan_tcoffee.1 usr/share/man/man1/snp_store.1 usr/share/man/man1/splazers.1 usr/share/man/man1/stellar.1 usr/share/man/man1/tree_recon.1 usr/share/man/man1/yara_indexer.1 usr/share/man/man1/yara_mapper.1 cd '/build/reproducible-path/seqan2-2.5.2' dh_fixperms -a find debian/seqan-apps ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/seqan-apps/usr/share/doc -type f -a -true -a ! -regex 'debian/seqan-apps/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/seqan-apps/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/seqan-apps/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/seqan-apps -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/seqan-apps/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x find debian/seqan-apps/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w debian/rules execute_after_dh_fixperms-arch make[1]: Entering directory '/build/reproducible-path/seqan2-2.5.2' for bin in `ls /build/reproducible-path/seqan2-2.5.2/debian/seqan-apps/usr/lib/seqan/bin/*.sh` ; do \ chmod +x /build/reproducible-path/seqan2-2.5.2/debian/seqan-apps/usr/lib/seqan/bin/`basename ${bin}` ; \ done make[1]: Leaving directory '/build/reproducible-path/seqan2-2.5.2' dh_missing -a dh_dwz -a install -m0755 -d debian/seqan-apps/usr/lib/debug/.dwz/aarch64-linux-gnu dwz -mdebian/seqan-apps/usr/lib/debug/.dwz/aarch64-linux-gnu/seqan-apps.debug -M/usr/lib/debug/.dwz/aarch64-linux-gnu/seqan-apps.debug -- debian/seqan-apps/usr/lib/seqan/bin/alf debian/seqan-apps/usr/lib/seqan/bin/bam2roi debian/seqan-apps/usr/lib/seqan/bin/bisar debian/seqan-apps/usr/lib/seqan/bin/casbar debian/seqan-apps/usr/lib/seqan/bin/compute_gain debian/seqan-apps/usr/lib/seqan/bin/dfi debian/seqan-apps/usr/lib/seqan/bin/fiona debian/seqan-apps/usr/lib/seqan/bin/fiona_illumina debian/seqan-apps/usr/lib/seqan/bin/four2three debian/seqan-apps/usr/lib/seqan/bin/fx_bam_coverage debian/seqan-apps/usr/lib/seqan/bin/gustaf debian/seqan-apps/usr/lib/seqan/bin/gustaf_mate_joining debian/seqan-apps/usr/lib/seqan/bin/insegt debian/seqan-apps/usr/lib/seqan/bin/mason_frag_sequencing debian/seqan-apps/usr/lib/seqan/bin/mason_genome debian/seqan-apps/usr/lib/seqan/bin/mason_materializer debian/seqan-apps/usr/lib/seqan/bin/mason_methylation debian/seqan-apps/usr/lib/seqan/bin/mason_simulator debian/seqan-apps/usr/lib/seqan/bin/mason_splicing debian/seqan-apps/usr/lib/seqan/bin/mason_variator debian/seqan-apps/usr/lib/seqan/bin/micro_razers debian/seqan-apps/usr/lib/seqan/bin/pair_align debian/seqan-apps/usr/lib/seqan/bin/param_chooser debian/seqan-apps/usr/lib/seqan/bin/rabema_build_gold_standard debian/seqan-apps/usr/lib/seqan/bin/rabema_evaluate debian/seqan-apps/usr/lib/seqan/bin/rabema_prepare_sam debian/seqan-apps/usr/lib/seqan/bin/razers debian/seqan-apps/usr/lib/seqan/bin/razers3 debian/seqan-apps/usr/lib/seqan/bin/rep_sep debian/seqan-apps/usr/lib/seqan/bin/roi_feature_projection debian/seqan-apps/usr/lib/seqan/bin/roi_plot_thumbnails debian/seqan-apps/usr/lib/seqan/bin/s4_join debian/seqan-apps/usr/lib/seqan/bin/s4_search debian/seqan-apps/usr/lib/seqan/bin/sak debian/seqan-apps/usr/lib/seqan/bin/sam2matrix debian/seqan-apps/usr/lib/seqan/bin/samcat debian/seqan-apps/usr/lib/seqan/bin/seqan_tcoffee debian/seqan-apps/usr/lib/seqan/bin/seqcons2 debian/seqan-apps/usr/lib/seqan/bin/sgip debian/seqan-apps/usr/lib/seqan/bin/snp_store debian/seqan-apps/usr/lib/seqan/bin/splazers debian/seqan-apps/usr/lib/seqan/bin/stellar debian/seqan-apps/usr/lib/seqan/bin/tree_recon debian/seqan-apps/usr/lib/seqan/bin/yara_indexer debian/seqan-apps/usr/lib/seqan/bin/yara_mapper objcopy --compress-debug-sections debian/seqan-apps/usr/lib/debug/.dwz/aarch64-linux-gnu/seqan-apps.debug chmod 0644 -- debian/seqan-apps/usr/lib/debug/.dwz/aarch64-linux-gnu/seqan-apps.debug dh_strip -a install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/f9 objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/seqan_tcoffee debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/f9/4274d65488ec381025bd4d16bfcd4bbd14af4a.debug chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/f9/4274d65488ec381025bd4d16bfcd4bbd14af4a.debug strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/seqan_tcoffee objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/f9/4274d65488ec381025bd4d16bfcd4bbd14af4a.debug debian/seqan-apps/usr/lib/seqan/bin/seqan_tcoffee install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/6e objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/bisar debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/6e/4d1241d25073826c9bbe86dbd8f56886df8154.debug chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/6e/4d1241d25073826c9bbe86dbd8f56886df8154.debug strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/bisar objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/6e/4d1241d25073826c9bbe86dbd8f56886df8154.debug debian/seqan-apps/usr/lib/seqan/bin/bisar install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/0d objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/fiona debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/0d/581d77161fcef0e2a64803bb69d377a1e82977.debug chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/0d/581d77161fcef0e2a64803bb69d377a1e82977.debug strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/fiona objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/0d/581d77161fcef0e2a64803bb69d377a1e82977.debug debian/seqan-apps/usr/lib/seqan/bin/fiona install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/1c objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/mason_materializer debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/1c/d80dedf097af0d45240e612854aea3ac22b54d.debug chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/1c/d80dedf097af0d45240e612854aea3ac22b54d.debug strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/mason_materializer objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/1c/d80dedf097af0d45240e612854aea3ac22b54d.debug debian/seqan-apps/usr/lib/seqan/bin/mason_materializer install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/82 objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/param_chooser debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/82/96e2b94c874c59c1ac6a55560ecb8285a0b1a7.debug chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/82/96e2b94c874c59c1ac6a55560ecb8285a0b1a7.debug strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/param_chooser objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/82/96e2b94c874c59c1ac6a55560ecb8285a0b1a7.debug debian/seqan-apps/usr/lib/seqan/bin/param_chooser install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/6e objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/rabema_evaluate debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/6e/57225cbc909a4a03a5fb1a134834f2e20df90e.debug chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/6e/57225cbc909a4a03a5fb1a134834f2e20df90e.debug strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/rabema_evaluate objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/6e/57225cbc909a4a03a5fb1a134834f2e20df90e.debug debian/seqan-apps/usr/lib/seqan/bin/rabema_evaluate install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/46 objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/dfi debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/46/d404be350b8436013374f86b461049cb6a4254.debug chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/46/d404be350b8436013374f86b461049cb6a4254.debug strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/dfi objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/46/d404be350b8436013374f86b461049cb6a4254.debug debian/seqan-apps/usr/lib/seqan/bin/dfi install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/e2 objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/splazers debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/e2/1890ee19884496fbb7a5b02878ca6a9b81c39c.debug chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/e2/1890ee19884496fbb7a5b02878ca6a9b81c39c.debug strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/splazers objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/e2/1890ee19884496fbb7a5b02878ca6a9b81c39c.debug debian/seqan-apps/usr/lib/seqan/bin/splazers install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/1f objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/s4_join debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/1f/f7e913cefebfcb38ddd0129ad24233bdccdaba.debug chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/1f/f7e913cefebfcb38ddd0129ad24233bdccdaba.debug strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/s4_join objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/1f/f7e913cefebfcb38ddd0129ad24233bdccdaba.debug debian/seqan-apps/usr/lib/seqan/bin/s4_join install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/6f objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/compute_gain debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/6f/9b2d8e73f16d8b563bb41e793c39cb3236f534.debug chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/6f/9b2d8e73f16d8b563bb41e793c39cb3236f534.debug strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/compute_gain objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/6f/9b2d8e73f16d8b563bb41e793c39cb3236f534.debug debian/seqan-apps/usr/lib/seqan/bin/compute_gain install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/ef objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/mason_methylation debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/ef/38f52b72ba9b8b994287c0fef98da157149815.debug chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/ef/38f52b72ba9b8b994287c0fef98da157149815.debug strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/mason_methylation objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/ef/38f52b72ba9b8b994287c0fef98da157149815.debug debian/seqan-apps/usr/lib/seqan/bin/mason_methylation install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/21 objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/sak debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/21/5aef3e25d0a32469b74fdfee5d216e89477d2d.debug chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/21/5aef3e25d0a32469b74fdfee5d216e89477d2d.debug strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/sak objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/21/5aef3e25d0a32469b74fdfee5d216e89477d2d.debug debian/seqan-apps/usr/lib/seqan/bin/sak install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/d1 objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/rep_sep debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/d1/59809d8915c3014a6c8ea789b63bc1ee2f33ae.debug chmod 0644 -- 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install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/d5 objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/sgip debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/d5/28197f1cefa09ab08cbb4dd6e1a92ce164b01b.debug chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/d5/28197f1cefa09ab08cbb4dd6e1a92ce164b01b.debug strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/sgip objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/d5/28197f1cefa09ab08cbb4dd6e1a92ce164b01b.debug debian/seqan-apps/usr/lib/seqan/bin/sgip install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/e6 objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/stellar debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/e6/4e93515b1822072d945b31b0087bf50738bef6.debug chmod 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debian/seqan-apps/usr/lib/seqan/bin/mason_variator debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/78/6397efd28543a41d04f65590e212063c43d2e3.debug chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/78/6397efd28543a41d04f65590e212063c43d2e3.debug strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/mason_variator objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/78/6397efd28543a41d04f65590e212063c43d2e3.debug debian/seqan-apps/usr/lib/seqan/bin/mason_variator install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/ea objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/samcat debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/ea/8a673fa20f021c628db5a410249324b89b8707.debug chmod 0644 -- 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--only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/yara_mapper debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/a0/9b7ba2d8957590d2e32f8c0b15f885d6d50528.debug chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/a0/9b7ba2d8957590d2e32f8c0b15f885d6d50528.debug strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/yara_mapper objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/a0/9b7ba2d8957590d2e32f8c0b15f885d6d50528.debug debian/seqan-apps/usr/lib/seqan/bin/yara_mapper install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/0c objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/yara_indexer debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/0c/953c359e62039a84b1a3fee0ff1c7ea41a8a6a.debug chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/0c/953c359e62039a84b1a3fee0ff1c7ea41a8a6a.debug strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/yara_indexer objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/0c/953c359e62039a84b1a3fee0ff1c7ea41a8a6a.debug debian/seqan-apps/usr/lib/seqan/bin/yara_indexer install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/16 objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/rabema_build_gold_standard debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/16/847c526dc643e8a397b21c1a60a093b8c8d92c.debug chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/16/847c526dc643e8a397b21c1a60a093b8c8d92c.debug strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/rabema_build_gold_standard objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/16/847c526dc643e8a397b21c1a60a093b8c8d92c.debug debian/seqan-apps/usr/lib/seqan/bin/rabema_build_gold_standard install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/de objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/tree_recon debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/de/87faf79dbac438e90446036d1f08254fb8eb69.debug chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/de/87faf79dbac438e90446036d1f08254fb8eb69.debug strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/tree_recon objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/de/87faf79dbac438e90446036d1f08254fb8eb69.debug debian/seqan-apps/usr/lib/seqan/bin/tree_recon install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/ee objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/alf debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/ee/54ebd2344f701311568520378a2dd32f9b2c13.debug chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/ee/54ebd2344f701311568520378a2dd32f9b2c13.debug strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/alf objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/ee/54ebd2344f701311568520378a2dd32f9b2c13.debug debian/seqan-apps/usr/lib/seqan/bin/alf install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/9f objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/gustaf_mate_joining debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/9f/2a4c111763c32c9869989bccff242b9a87fd03.debug chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/9f/2a4c111763c32c9869989bccff242b9a87fd03.debug strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/gustaf_mate_joining objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/9f/2a4c111763c32c9869989bccff242b9a87fd03.debug debian/seqan-apps/usr/lib/seqan/bin/gustaf_mate_joining install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/35 objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/micro_razers debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/35/ae32ffe8123785f1ff431360026af9b7ce2186.debug chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/35/ae32ffe8123785f1ff431360026af9b7ce2186.debug strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/micro_razers objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/35/ae32ffe8123785f1ff431360026af9b7ce2186.debug debian/seqan-apps/usr/lib/seqan/bin/micro_razers install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/fb objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/roi_plot_thumbnails debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/fb/432af48a906f3ac6355d53991663f9803eabae.debug chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/fb/432af48a906f3ac6355d53991663f9803eabae.debug strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/roi_plot_thumbnails objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/fb/432af48a906f3ac6355d53991663f9803eabae.debug debian/seqan-apps/usr/lib/seqan/bin/roi_plot_thumbnails install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/c5 objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/mason_frag_sequencing debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/c5/6cd9624fa575f46e53b37ab823f5ec59bc5830.debug chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/c5/6cd9624fa575f46e53b37ab823f5ec59bc5830.debug strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/mason_frag_sequencing objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/c5/6cd9624fa575f46e53b37ab823f5ec59bc5830.debug debian/seqan-apps/usr/lib/seqan/bin/mason_frag_sequencing install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/c7 objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/mason_splicing debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/c7/a66c1f7d5984346211235af48254cee332d3b5.debug chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/c7/a66c1f7d5984346211235af48254cee332d3b5.debug strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/mason_splicing objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/c7/a66c1f7d5984346211235af48254cee332d3b5.debug debian/seqan-apps/usr/lib/seqan/bin/mason_splicing install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/a9 objcopy --only-keep-debug --compress-debug-sections debian/seqan-apps/usr/lib/seqan/bin/gustaf debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/a9/7a3702358c94b3c554827aa45e58a8d0b43872.debug chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/a9/7a3702358c94b3c554827aa45e58a8d0b43872.debug strip --remove-section=.comment --remove-section=.note debian/seqan-apps/usr/lib/seqan/bin/gustaf objcopy --add-gnu-debuglink debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.build-id/a9/7a3702358c94b3c554827aa45e58a8d0b43872.debug debian/seqan-apps/usr/lib/seqan/bin/gustaf install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/seqan-apps/usr/lib/debug/.dwz/aarch64-linux-gnu debian/.debhelper/seqan-apps/dbgsym-root/usr/lib/debug/.dwz rm -fr debian/seqan-apps/usr/lib/debug/.dwz rmdir -p --ignore-fail-on-non-empty debian/seqan-apps/usr/lib/debug install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/usr/share/doc ln -s seqan-apps debian/.debhelper/seqan-apps/dbgsym-root/usr/share/doc/seqan-apps-dbgsym install -m0755 -d debian/.debhelper/seqan-apps dh_makeshlibs -a rm -f debian/seqan-apps/DEBIAN/shlibs dh_shlibdeps -a install -m0755 -d debian/seqan-apps/DEBIAN dpkg-shlibdeps -Tdebian/seqan-apps.substvars debian/seqan-apps/usr/lib/seqan/bin/seqan_tcoffee debian/seqan-apps/usr/lib/seqan/bin/bisar debian/seqan-apps/usr/lib/seqan/bin/fiona debian/seqan-apps/usr/lib/seqan/bin/mason_materializer debian/seqan-apps/usr/lib/seqan/bin/param_chooser debian/seqan-apps/usr/lib/seqan/bin/rabema_evaluate debian/seqan-apps/usr/lib/seqan/bin/dfi debian/seqan-apps/usr/lib/seqan/bin/splazers debian/seqan-apps/usr/lib/seqan/bin/s4_join debian/seqan-apps/usr/lib/seqan/bin/compute_gain debian/seqan-apps/usr/lib/seqan/bin/mason_methylation debian/seqan-apps/usr/lib/seqan/bin/sak debian/seqan-apps/usr/lib/seqan/bin/rep_sep debian/seqan-apps/usr/lib/seqan/bin/sam2matrix debian/seqan-apps/usr/lib/seqan/bin/razers debian/seqan-apps/usr/lib/seqan/bin/insegt debian/seqan-apps/usr/lib/seqan/bin/seqcons2 debian/seqan-apps/usr/lib/seqan/bin/four2three debian/seqan-apps/usr/lib/seqan/bin/sgip debian/seqan-apps/usr/lib/seqan/bin/stellar debian/seqan-apps/usr/lib/seqan/bin/rabema_prepare_sam debian/seqan-apps/usr/lib/seqan/bin/fx_bam_coverage debian/seqan-apps/usr/lib/seqan/bin/pair_align debian/seqan-apps/usr/lib/seqan/bin/razers3 debian/seqan-apps/usr/lib/seqan/bin/bam2roi debian/seqan-apps/usr/lib/seqan/bin/casbar debian/seqan-apps/usr/lib/seqan/bin/mason_variator debian/seqan-apps/usr/lib/seqan/bin/samcat debian/seqan-apps/usr/lib/seqan/bin/s4_search debian/seqan-apps/usr/lib/seqan/bin/mason_genome debian/seqan-apps/usr/lib/seqan/bin/roi_feature_projection debian/seqan-apps/usr/lib/seqan/bin/snp_store debian/seqan-apps/usr/lib/seqan/bin/mason_simulator debian/seqan-apps/usr/lib/seqan/bin/fiona_illumina debian/seqan-apps/usr/lib/seqan/bin/yara_mapper debian/seqan-apps/usr/lib/seqan/bin/yara_indexer debian/seqan-apps/usr/lib/seqan/bin/rabema_build_gold_standard debian/seqan-apps/usr/lib/seqan/bin/tree_recon debian/seqan-apps/usr/lib/seqan/bin/alf debian/seqan-apps/usr/lib/seqan/bin/gustaf_mate_joining debian/seqan-apps/usr/lib/seqan/bin/micro_razers debian/seqan-apps/usr/lib/seqan/bin/roi_plot_thumbnails debian/seqan-apps/usr/lib/seqan/bin/mason_frag_sequencing debian/seqan-apps/usr/lib/seqan/bin/mason_splicing debian/seqan-apps/usr/lib/seqan/bin/gustaf dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-aarch64.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged dh_installdeb -a install -m0755 -d debian/seqan-apps/DEBIAN dh_gencontrol -a install -m0755 -d debian/seqan-apps/DEBIAN echo misc:Depends= >> debian/seqan-apps.substvars echo misc:Pre-Depends= >> debian/seqan-apps.substvars install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/DEBIAN dpkg-gencontrol -pseqan-apps -ldebian/changelog -Tdebian/seqan-apps.substvars -cdebian/control -Pdebian/.debhelper/seqan-apps/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=seqan-apps-dbgsym -DDepends="seqan-apps (= \${binary:Version})" -DDescription="debug symbols for seqan-apps" -DBuild-Ids="017216df3ea62b926810d08f2bdeea4a1100934b 0c953c359e62039a84b1a3fee0ff1c7ea41a8a6a 0d581d77161fcef0e2a64803bb69d377a1e82977 16847c526dc643e8a397b21c1a60a093b8c8d92c 1cd80dedf097af0d45240e612854aea3ac22b54d 1ff7e913cefebfcb38ddd0129ad24233bdccdaba 215aef3e25d0a32469b74fdfee5d216e89477d2d 35ae32ffe8123785f1ff431360026af9b7ce2186 38bfcf9f24c2c8120268b21301524ed610607b02 46d404be350b8436013374f86b461049cb6a4254 4a3c0a8fdfc1645e570475ef219726877cb48516 545ee9f2ce5ea1d7083df05e79f7c6c10c3a9f6a 5d99faaa3f88eb25eaf2546c03d50d62c2007f1c 62e2cbfd844b18be71be7ea23a8489f0d0e4321e 6e4d1241d25073826c9bbe86dbd8f56886df8154 6e57225cbc909a4a03a5fb1a134834f2e20df90e 6f9b2d8e73f16d8b563bb41e793c39cb3236f534 786397efd28543a41d04f65590e212063c43d2e3 7cc2722e5cfc152360cb3cc8a99c248e50711b26 8296e2b94c874c59c1ac6a55560ecb8285a0b1a7 8766676bd24922564d76f260c09a90f9a9937cb5 90e38bcd80fd1b53567400ce8a523e1884091bf8 9bf528b98a9c0b77fd890c6e10f2196fafc6feec 9f2a4c111763c32c9869989bccff242b9a87fd03 a09b7ba2d8957590d2e32f8c0b15f885d6d50528 a97a3702358c94b3c554827aa45e58a8d0b43872 b5a54d8fed3a883cbef2422efde0ab9b22d371be b9c95b432f237b394a192a32f1c222c3f0145eb1 c56cd9624fa575f46e53b37ab823f5ec59bc5830 c5c85ffbb6e3822fd20b799b0d92a6f925c4a7d8 c7a66c1f7d5984346211235af48254cee332d3b5 d159809d8915c3014a6c8ea789b63bc1ee2f33ae d528197f1cefa09ab08cbb4dd6e1a92ce164b01b da188cf25d424afccbc64f277e816386a6083ec3 dcfbe1f5f9174bf3fbfcb31689581a4efffdd1fd de87faf79dbac438e90446036d1f08254fb8eb69 e21890ee19884496fbb7a5b02878ca6a9b81c39c e64e93515b1822072d945b31b0087bf50738bef6 e81a3726d347a0e0fe45aade8d10bc9c86f6b253 ea8a673fa20f021c628db5a410249324b89b8707 ee54ebd2344f701311568520378a2dd32f9b2c13 ef38f52b72ba9b8b994287c0fef98da157149815 f45e2fbd3132aa5808c053bbeeec3f304f8b63c3 f94274d65488ec381025bd4d16bfcd4bbd14af4a fb432af48a906f3ac6355d53991663f9803eabae" -DSection=debug -UMulti-Arch -UReplaces -UBreaks chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/DEBIAN/control dpkg-gencontrol -pseqan-apps -ldebian/changelog -Tdebian/seqan-apps.substvars -cdebian/control -Pdebian/seqan-apps chmod 0644 -- debian/seqan-apps/DEBIAN/control dh_md5sums -a install -m0755 -d debian/seqan-apps/DEBIAN cd debian/seqan-apps >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/seqan-apps/DEBIAN/md5sums install -m0755 -d debian/.debhelper/seqan-apps/dbgsym-root/DEBIAN cd debian/.debhelper/seqan-apps/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/seqan-apps/dbgsym-root/DEBIAN/md5sums dh_builddeb -a dpkg-deb --root-owner-group --build debian/seqan-apps .. dpkg-deb --root-owner-group --build debian/.debhelper/seqan-apps/dbgsym-root .. dpkg-deb: building package 'seqan-apps-dbgsym' in '../seqan-apps-dbgsym_2.5.2-1_arm64.deb'. dpkg-deb: building package 'seqan-apps' in '../seqan-apps_2.5.2-1_arm64.deb'. dpkg-genbuildinfo --build=any -O../seqan2_2.5.2-1_arm64.buildinfo dpkg-genchanges --build=any -O../seqan2_2.5.2-1_arm64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2026-01-14T21:29:59Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes Wed, 14 Jan 2026 21:30:00 +0000 | +------------------------------------------------------------------------------+ seqan2_2.5.2-1_arm64.changes: ----------------------------- Format: 1.8 Date: Fri, 09 Jan 2026 09:45:46 +0100 Source: seqan2 Binary: seqan-apps seqan-apps-dbgsym Architecture: arm64 Version: 2.5.2-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Michael R. Crusoe Description: seqan-apps - C++ library for the analysis of biological sequences Changes: seqan2 (2.5.2-1) unstable; urgency=medium . [ Michael R. Crusoe ] * d/rules: remove workaround for archs we no longer build for. * d/control: drop build-dep on fakeroot * New upstream version * Standards-Version: 4.7.3 (routine-update) * debputy lint --auto-fix (routine-update) * d/patches: many patches upstreamed and removed. * d/rules: configure with -DALIGN_SIMD_TEST=FALSE as per upstream, to avoid compiling a 256+ level template in debug mode which takes up too much memory. * debian/libseqan2-dev.docs: README.rst→README.md * d/rules: According to upstream, solution_online_search_finder.cpp works again, so stop deleting that test * d/upstream/metadata: link to upstream's git repo * d/rules: re-enable maximal parallel building. * d/patches: Dropped skip-some-apps-on-some-archs, we don't even build for these archs anymore (not a current Debian port, or not 64-bit. * Restore demos/tutorial/file_io_overview/example.sam after running the tests, instead of deleting it via d/clean. . [ Enrico Seiler ] * d/control: remove unneeded deps * d/rules: strip path from seqan-apps * d/salsa-ci.yml: Skip arm64 crossbuild and reprotest, add env var for use by d/rules * d/patches: refresh patches * d/patches: remove forwarded patches . [ Michael R. Crusoe ] Remove patch skip-some-apps-on-some-archs that is missing from debian/patches/series. Checksums-Sha1: 045b81c5e552ffc5f14bcf234b3a207c71beaad8 254345288 seqan-apps-dbgsym_2.5.2-1_arm64.deb a7ad91404ea37d67a2276a40d9d521c98c2339e1 11688652 seqan-apps_2.5.2-1_arm64.deb 4bd45be2a69c533270f9d57e5ce89b2ceee5fb8a 6444 seqan2_2.5.2-1_arm64.buildinfo Checksums-Sha256: 2fa808a11c03d7ca4a941e6fe9931356a1b689a1fa156d5ccba56e7a9d3d4926 254345288 seqan-apps-dbgsym_2.5.2-1_arm64.deb 991fe0bf7d6704bca880d05f0a8d12c735fc9ee6bce9a376c89135d163ec5d34 11688652 seqan-apps_2.5.2-1_arm64.deb 6df0e512c2a6224cf0a4de182d82dcf416aa1961e78eddfab29d817b7e8d32a4 6444 seqan2_2.5.2-1_arm64.buildinfo Files: 2c3228d7cce5704e9cd9ff8152505fbb 254345288 debug optional seqan-apps-dbgsym_2.5.2-1_arm64.deb 594c0ba8c32a2f9d281c9c22a0d702a5 11688652 science optional seqan-apps_2.5.2-1_arm64.deb 1ad16974976009f76734b250c4fed860 6444 science optional seqan2_2.5.2-1_arm64.buildinfo +------------------------------------------------------------------------------+ | Buildinfo Wed, 14 Jan 2026 21:30:01 +0000 | +------------------------------------------------------------------------------+ Format: 1.0 Source: seqan2 Binary: seqan-apps seqan-apps-dbgsym Architecture: arm64 Version: 2.5.2-1 Checksums-Md5: 2c3228d7cce5704e9cd9ff8152505fbb 254345288 seqan-apps-dbgsym_2.5.2-1_arm64.deb 594c0ba8c32a2f9d281c9c22a0d702a5 11688652 seqan-apps_2.5.2-1_arm64.deb Checksums-Sha1: 045b81c5e552ffc5f14bcf234b3a207c71beaad8 254345288 seqan-apps-dbgsym_2.5.2-1_arm64.deb a7ad91404ea37d67a2276a40d9d521c98c2339e1 11688652 seqan-apps_2.5.2-1_arm64.deb Checksums-Sha256: 2fa808a11c03d7ca4a941e6fe9931356a1b689a1fa156d5ccba56e7a9d3d4926 254345288 seqan-apps-dbgsym_2.5.2-1_arm64.deb 991fe0bf7d6704bca880d05f0a8d12c735fc9ee6bce9a376c89135d163ec5d34 11688652 seqan-apps_2.5.2-1_arm64.deb Build-Origin: Debian Build-Architecture: arm64 Build-Date: Wed, 14 Jan 2026 21:29:56 +0000 Build-Path: /build/reproducible-path/seqan2-2.5.2 Installed-Build-Depends: architecture-properties (= 0.2.6), autoconf (= 2.72-3.1), automake (= 1:1.18.1-3), autopoint (= 0.23.2-1), autotools-dev (= 20240727.1), base-files (= 14), base-passwd (= 3.6.8), bash (= 5.3-1), binutils (= 2.45.50.20251209-1), binutils-aarch64-linux-gnu (= 2.45.50.20251209-1), binutils-common (= 2.45.50.20251209-1), bsdextrautils (= 2.41.3-3), build-essential (= 12.12), bzip2 (= 1.0.8-6), cmake (= 4.1.1+really3.31.6-2), cmake-data (= 4.1.1+really3.31.6-2), coreutils (= 9.7-3), cpp (= 4:15.2.0-4), cpp-15 (= 15.2.0-12), cpp-15-aarch64-linux-gnu (= 15.2.0-12), cpp-aarch64-linux-gnu (= 4:15.2.0-4), dash (= 0.5.12-12), debconf (= 1.5.91), debhelper (= 13.29), debianutils (= 5.23.2), dh-autoreconf (= 21), dh-strip-nondeterminism (= 1.15.0-1), diffutils (= 1:3.12-1), dpkg (= 1.23.3), dpkg-dev (= 1.23.3), dwz (= 0.16-2), file (= 1:5.46-5), findutils (= 4.10.0-3), g++ (= 4:15.2.0-4), g++-15 (= 15.2.0-12), g++-15-aarch64-linux-gnu (= 15.2.0-12), g++-aarch64-linux-gnu (= 4:15.2.0-4), gcc (= 4:15.2.0-4), gcc-15 (= 15.2.0-12), gcc-15-aarch64-linux-gnu (= 15.2.0-12), gcc-15-base (= 15.2.0-12), gcc-aarch64-linux-gnu (= 4:15.2.0-4), gettext (= 0.23.2-1), gettext-base (= 0.23.2-1), grep (= 3.12-1), groff-base (= 1.23.0-10), gzip (= 1.13-1), hostname (= 3.25), init-system-helpers (= 1.69), intltool-debian (= 0.35.0+20060710.6), libacl1 (= 2.3.2-2+b1), libarchive-zip-perl (= 1.68-1), libarchive13t64 (= 3.8.4-1), libasan8 (= 15.2.0-12), libatomic1 (= 15.2.0-12), libattr1 (= 1:2.5.2-3), libaudit-common (= 1:4.1.2-1), libaudit1 (= 1:4.1.2-1+b1), libbinutils (= 2.45.50.20251209-1), libblkid1 (= 2.41.3-3), libboost-dev (= 1.83.0.2+b2), libboost1.83-dev (= 1.83.0-5+b1), libbrotli1 (= 1.1.0-2+b9), libbz2-1.0 (= 1.0.8-6), libbz2-dev (= 1.0.8-6), libc-bin (= 2.42-7), libc-dev-bin (= 2.42-7), libc-gconv-modules-extra (= 2.42-7), libc6 (= 2.42-7), libc6-dev (= 2.42-7), libcap-ng0 (= 0.8.5-4+b2), libcap2 (= 1:2.75-10+b5), libcc1-0 (= 15.2.0-12), libcom-err2 (= 1.47.2-3+b8), libcrypt1 (= 1:4.5.1-1), libctf-nobfd0 (= 2.45.50.20251209-1), libctf0 (= 2.45.50.20251209-1), libcurl4t64 (= 8.18.0-1), libdb5.3t64 (= 5.3.28+dfsg2-11), libdebconfclient0 (= 0.282+b2), libdebhelper-perl (= 13.29), libdpkg-perl (= 1.23.3), libelf1t64 (= 0.194-1), libexpat1 (= 2.7.3-1), libffi8 (= 3.5.2-3), libfile-stripnondeterminism-perl (= 1.15.0-1), libgcc-15-dev (= 15.2.0-12), libgcc-s1 (= 15.2.0-12), libgdbm-compat4t64 (= 1.26-1), libgdbm6t64 (= 1.26-1), libgmp10 (= 2:6.3.0+dfsg-5), libgnutls30t64 (= 3.8.11-3), libgomp1 (= 15.2.0-12), libgprofng0 (= 2.45.50.20251209-1), libgssapi-krb5-2 (= 1.22.1-2), libhogweed6t64 (= 3.10.2-1), libhwasan0 (= 15.2.0-12), libidn2-0 (= 2.3.8-4), libisl23 (= 0.27-1), libitm1 (= 15.2.0-12), libjansson4 (= 2.14-2+b4), libjsoncpp26 (= 1.9.6-5), libk5crypto3 (= 1.22.1-2), libkeyutils1 (= 1.6.3-6), libkrb5-3 (= 1.22.1-2), libkrb5support0 (= 1.22.1-2), libldap2 (= 2.6.10+dfsg-1), liblsan0 (= 15.2.0-12), liblz4-1 (= 1.10.0-6), liblzma5 (= 5.8.2-1), libmagic-mgc (= 1:5.46-5), libmagic1t64 (= 1:5.46-5), libmd0 (= 1.1.0-2+b1), libmount1 (= 2.41.3-3), libmpc3 (= 1.3.1-2), libmpfr6 (= 4.2.2-2), libncursesw6 (= 6.6+20251231-1), libnettle8t64 (= 3.10.2-1), libnghttp2-14 (= 1.64.0-1.1+b1), libnghttp3-9 (= 1.12.0-1), libngtcp2-16 (= 1.16.0-1), libngtcp2-crypto-ossl0 (= 1.16.0-1), libp11-kit0 (= 0.25.10-1), libpam-modules (= 1.7.0-5), libpam-modules-bin (= 1.7.0-5), libpam-runtime (= 1.7.0-5), libpam0g (= 1.7.0-5), libpcre2-8-0 (= 10.46-1), libperl5.40 (= 5.40.1-7), libpipeline1 (= 1.5.8-2), libproc2-0 (= 2:4.0.4-9), libpsl5t64 (= 0.21.2-1.1+b1), libpython3-stdlib (= 3.13.9-2), libpython3.13-minimal (= 3.13.11-1+b1), libpython3.13-stdlib (= 3.13.11-1+b1), libreadline8t64 (= 8.3-3), librhash1 (= 1.4.6-1.1), librtmp1 (= 2.4+20151223.gitfa8646d.1-3), libsasl2-2 (= 2.1.28+dfsg1-10), libsasl2-modules-db (= 2.1.28+dfsg1-10), libseccomp2 (= 2.6.0-2+b1), libselinux1 (= 3.9-4+b1), libsframe2 (= 2.45.50.20251209-1), libsmartcols1 (= 2.41.3-3), libsqlite3-0 (= 3.46.1-8), libssh2-1t64 (= 1.11.1-1), libssl3t64 (= 3.5.4-1), libstdc++-15-dev (= 15.2.0-12), libstdc++6 (= 15.2.0-12), libsystemd0 (= 259-1), libtasn1-6 (= 4.20.0-2), libtinfo6 (= 6.6+20251231-1), libtool (= 2.5.4-9), libtsan2 (= 15.2.0-12), libubsan1 (= 15.2.0-12), libuchardet0 (= 0.0.8-2), libudev1 (= 259-1), libunistring5 (= 1.3-2), libuuid1 (= 2.41.3-3), libuv1t64 (= 1.51.0-2), libxml2-16 (= 2.15.1+dfsg-2+b1), libxxhash0 (= 0.8.3-2), libzstd1 (= 1.5.7+dfsg-3), linux-libc-dev (= 6.18.3-1), m4 (= 1.4.20-2), make (= 4.4.1-3), man-db (= 2.13.1-1), mawk (= 1.3.4.20250131-2), media-types (= 14.0.0), ncurses-base (= 6.6+20251231-1), ncurses-bin (= 6.6+20251231-1), netbase (= 6.5), openssl-provider-legacy (= 3.5.4-1), patch (= 2.8-2), perl (= 5.40.1-7), perl-base (= 5.40.1-7), perl-modules-5.40 (= 5.40.1-7), po-debconf (= 1.0.22), procps (= 2:4.0.4-9), python3 (= 3.13.9-2), python3-minimal (= 3.13.9-2), python3.13 (= 3.13.11-1+b1), python3.13-minimal (= 3.13.11-1+b1), readline-common (= 8.3-3), rpcsvc-proto (= 1.4.3-1+b1), sed (= 4.9-2+b1), sensible-utils (= 0.0.26), sysvinit-utils (= 3.15-6), tar (= 1.35+dfsg-3.1), tzdata (= 2025c-3), util-linux (= 2.41.3-3), xz-utils (= 5.8.2-1), zlib1g (= 1:1.3.dfsg+really1.3.1-1+b2), zlib1g-dev (= 1:1.3.dfsg+really1.3.1-1+b2) Environment: DEB_BUILD_OPTIONS="parallel=8" LANG="C.UTF-8" LC_COLLATE="C.UTF-8" LC_CTYPE="C.UTF-8" SOURCE_DATE_EPOCH="1767948346" +------------------------------------------------------------------------------+ | Package contents Wed, 14 Jan 2026 21:30:01 +0000 | +------------------------------------------------------------------------------+ seqan-apps-dbgsym_2.5.2-1_arm64.deb ----------------------------------- new Debian package, version 2.0. size 254345288 bytes: control archive=2612 bytes. 2185 bytes, 12 lines control 4858 bytes, 46 lines md5sums Package: seqan-apps-dbgsym Source: seqan2 Version: 2.5.2-1 Auto-Built-Package: debug-symbols Architecture: arm64 Maintainer: Debian Med Packaging Team Installed-Size: 322616 Depends: seqan-apps (= 2.5.2-1) Section: 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08:45 ./usr/share/doc/ lrwxrwxrwx root/root 0 2026-01-09 08:45 ./usr/share/doc/seqan-apps-dbgsym -> seqan-apps seqan-apps_2.5.2-1_arm64.deb ---------------------------- new Debian package, version 2.0. size 11688652 bytes: control archive=4872 bytes. 979 bytes, 20 lines control 11913 bytes, 158 lines md5sums Package: seqan-apps Source: seqan2 Version: 2.5.2-1 Architecture: arm64 Maintainer: Debian Med Packaging Team Installed-Size: 70421 Depends: libbz2-1.0, libc6 (>= 2.38), libgcc-s1 (>= 4.5), libgomp1 (>= 6), libstdc++6 (>= 14), zlib1g (>= 1:1.1.4) Suggests: cwltool | cwl-runner Section: science Priority: optional Homepage: https://www.seqan.de/ Description: C++ library for the analysis of biological sequences SeqAn is a C++ template library of efficient algorithms and data structures for the analysis of sequences with the focus on biological data. This library applies a unique generic design that guarantees high performance, generality, extensibility, and integration with other libraries. SeqAn is easy to use and simplifies the development of new software tools with a minimal loss of performance. This package contains the applications dfi, pair_align, micro_razers, seqan_tcoffee, seqcons, razers and tree_recon. drwxr-xr-x root/root 0 2026-01-09 08:45 ./ drwxr-xr-x root/root 0 2026-01-09 08:45 ./usr/ drwxr-xr-x root/root 0 2026-01-09 08:45 ./usr/bin/ lrwxrwxrwx root/root 0 2026-01-09 08:45 ./usr/bin/alf -> ../lib/seqan/bin/alf lrwxrwxrwx root/root 0 2026-01-09 08:45 ./usr/bin/gustaf -> ../lib/seqan/bin/gustaf lrwxrwxrwx root/root 0 2026-01-09 08:45 ./usr/bin/insegt -> ../lib/seqan/bin/insegt lrwxrwxrwx root/root 0 2026-01-09 08:45 ./usr/bin/mason_frag_sequencing -> ../lib/seqan/bin/mason_frag_sequencing lrwxrwxrwx root/root 0 2026-01-09 08:45 ./usr/bin/mason_genome -> ../lib/seqan/bin/mason_genome lrwxrwxrwx root/root 0 2026-01-09 08:45 ./usr/bin/mason_materializer -> ../lib/seqan/bin/mason_materializer lrwxrwxrwx root/root 0 2026-01-09 08:45 ./usr/bin/mason_methylation -> ../lib/seqan/bin/mason_methylation lrwxrwxrwx root/root 0 2026-01-09 08:45 ./usr/bin/micro_razers -> ../lib/seqan/bin/micro_razers lrwxrwxrwx root/root 0 2026-01-09 08:45 ./usr/bin/pair_align -> ../lib/seqan/bin/pair_align lrwxrwxrwx root/root 0 2026-01-09 08:45 ./usr/bin/rabema_build_gold_standard -> ../lib/seqan/bin/rabema_build_gold_standard lrwxrwxrwx root/root 0 2026-01-09 08:45 ./usr/bin/rabema_evaluate -> ../lib/seqan/bin/rabema_evaluate lrwxrwxrwx root/root 0 2026-01-09 08:45 ./usr/bin/rabema_prepare_sam -> ../lib/seqan/bin/rabema_prepare_sam lrwxrwxrwx root/root 0 2026-01-09 08:45 ./usr/bin/razers -> ../lib/seqan/bin/razers lrwxrwxrwx root/root 0 2026-01-09 08:45 ./usr/bin/razers3 -> ../lib/seqan/bin/razers3 lrwxrwxrwx root/root 0 2026-01-09 08:45 ./usr/bin/sak -> ../lib/seqan/bin/sak lrwxrwxrwx root/root 0 2026-01-09 08:45 ./usr/bin/seqan_tcoffee -> ../lib/seqan/bin/seqan_tcoffee lrwxrwxrwx root/root 0 2026-01-09 08:45 ./usr/bin/snp_store -> ../lib/seqan/bin/snp_store lrwxrwxrwx root/root 0 2026-01-09 08:45 ./usr/bin/splazers -> ../lib/seqan/bin/splazers lrwxrwxrwx root/root 0 2026-01-09 08:45 ./usr/bin/stellar -> ../lib/seqan/bin/stellar lrwxrwxrwx root/root 0 2026-01-09 08:45 ./usr/bin/tree_recon -> ../lib/seqan/bin/tree_recon lrwxrwxrwx root/root 0 2026-01-09 08:45 ./usr/bin/yara_indexer -> ../lib/seqan/bin/yara_indexer lrwxrwxrwx root/root 0 2026-01-09 08:45 ./usr/bin/yara_mapper -> ../lib/seqan/bin/yara_mapper drwxr-xr-x root/root 0 2026-01-09 08:45 ./usr/lib/ drwxr-xr-x root/root 0 2026-01-09 08:45 ./usr/lib/seqan/ drwxr-xr-x root/root 0 2026-01-09 08:45 ./usr/lib/seqan/bin/ -rwxr-xr-x root/root 593512 2026-01-09 08:45 ./usr/lib/seqan/bin/alf -rwxr-xr-x root/root 593432 2026-01-09 08:45 ./usr/lib/seqan/bin/bam2roi -rwxr-xr-x root/root 1324 2026-01-08 00:52 ./usr/lib/seqan/bin/bed_sort.sh -rwxr-xr-x root/root 855904 2026-01-09 08:45 ./usr/lib/seqan/bin/bisar -rwxr-xr-x root/root 1118432 2026-01-09 08:45 ./usr/lib/seqan/bin/casbar -rwxr-xr-x root/root 659064 2026-01-09 08:45 ./usr/lib/seqan/bin/compute_gain -rwxr-xr-x root/root 724584 2026-01-09 08:45 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Build Type: any Build-Space: 10545976 Build-Time: 1772 Distribution: unstable Host Architecture: arm64 Install-Time: 4 Job: /srv/rebuilderd/tmp/rebuilderd0EwZRe/inputs/seqan2_2.5.2-1.dsc Machine Architecture: arm64 Package: seqan2 Package-Time: 1788 Source-Version: 2.5.2-1 Space: 10545976 Status: successful Version: 2.5.2-1 -------------------------------------------------------------------------------- Finished at 2026-01-14T21:29:59Z Build needed 00:29:48, 10545976k disk space build artifacts stored in /srv/rebuilderd/tmp/rebuilderd0EwZRe/out checking seqan-apps-dbgsym_2.5.2-1_arm64.deb: size... sha256... sha1... md5... all OK checking seqan-apps_2.5.2-1_arm64.deb: size differs for seqan-apps_2.5.2-1_arm64.deb