=============================================================================== About this build: this rebuild has been done as part of reproduce.debian.net where we aim to reproduce Debian binary packages distributed via ftp.debian.org, by rebuilding using the exact same packages as the original build on the buildds, as described in the relevant .buildinfo file from buildinfos.debian.net. For more information please go to https://reproduce.debian.net or join #debian-reproducible on irc.debian.org =============================================================================== Preparing download of sources for /srv/rebuilderd/tmp/rebuilderdSyAapZ/inputs/pymol_3.1.0+dfsg-1+b3_arm64.buildinfo Source: pymol Version: 3.1.0+dfsg-1 rebuilderd-worker node: codethink02-arm64 +------------------------------------------------------------------------------+ | Downloading sources Thu, 09 Apr 2026 19:53:49 +0000 | +------------------------------------------------------------------------------+ Get:1 https://deb.debian.org/debian trixie InRelease [140 kB] Get:2 https://deb.debian.org/debian-security trixie-security InRelease [43.4 kB] Get:3 https://deb.debian.org/debian trixie-updates InRelease [47.3 kB] Get:4 https://deb.debian.org/debian trixie-proposed-updates InRelease [57.6 kB] Get:5 https://deb.debian.org/debian trixie-backports InRelease [54.0 kB] Get:6 https://deb.debian.org/debian forky InRelease [137 kB] Get:7 https://deb.debian.org/debian sid InRelease [187 kB] Get:8 https://deb.debian.org/debian experimental InRelease [91.7 kB] Get:9 https://deb.debian.org/debian trixie/non-free-firmware Sources [6552 B] Get:10 https://deb.debian.org/debian trixie/main Sources [10.5 MB] Get:11 https://deb.debian.org/debian-security trixie-security/non-free-firmware Sources [696 B] Get:12 https://deb.debian.org/debian-security trixie-security/main Sources [126 kB] Get:13 https://deb.debian.org/debian trixie-updates/main Sources [2788 B] Get:14 https://deb.debian.org/debian trixie-proposed-updates/main Sources [86.8 kB] Get:15 https://deb.debian.org/debian trixie-backports/main Sources [189 kB] Get:16 https://deb.debian.org/debian trixie-backports/non-free-firmware Sources [2984 B] Get:17 https://deb.debian.org/debian forky/non-free-firmware Sources [8300 B] Get:18 https://deb.debian.org/debian forky/main Sources [10.8 MB] Get:19 https://deb.debian.org/debian sid/main Sources [11.5 MB] Get:20 https://deb.debian.org/debian sid/non-free-firmware Sources [10.3 kB] Get:21 https://deb.debian.org/debian experimental/main Sources [422 kB] Get:22 https://deb.debian.org/debian experimental/non-free-firmware Sources [2568 B] Fetched 34.4 MB in 31s (1110 kB/s) Reading package lists... 'https://deb.debian.org/debian/pool/main/p/pymol/pymol_3.1.0%2bdfsg-1.dsc' pymol_3.1.0+dfsg-1.dsc 2307 SHA256:e18ec473635c3d0d9e19eeb1b36e75c703aa46cd72b36728364a2789e8112ed8 'https://deb.debian.org/debian/pool/main/p/pymol/pymol_3.1.0%2bdfsg.orig.tar.xz' pymol_3.1.0+dfsg.orig.tar.xz 21978280 SHA256:dcd6d304e6865a618cab1d053ea470f09abcd716c429248d84de59f947102b1d 'https://deb.debian.org/debian/pool/main/p/pymol/pymol_3.1.0%2bdfsg-1.debian.tar.xz' pymol_3.1.0+dfsg-1.debian.tar.xz 57900 SHA256:199a7e3227fba659093cda7cfdadca5ebc9dfd8233497d94bd9e30566bb1bb9a dcd6d304e6865a618cab1d053ea470f09abcd716c429248d84de59f947102b1d pymol_3.1.0+dfsg.orig.tar.xz 199a7e3227fba659093cda7cfdadca5ebc9dfd8233497d94bd9e30566bb1bb9a pymol_3.1.0+dfsg-1.debian.tar.xz e18ec473635c3d0d9e19eeb1b36e75c703aa46cd72b36728364a2789e8112ed8 pymol_3.1.0+dfsg-1.dsc +------------------------------------------------------------------------------+ | Calling debrebuild Thu, 09 Apr 2026 19:54:21 +0000 | +------------------------------------------------------------------------------+ Rebuilding pymol=3.1.0+dfsg-1 in /srv/rebuilderd/tmp/rebuilderdSyAapZ/inputs now. + nice /usr/bin/debrebuild --buildresult=/srv/rebuilderd/tmp/rebuilderdSyAapZ/out --builder=sbuild+unshare --cache=/srv/rebuilderd/cache -- /srv/rebuilderd/tmp/rebuilderdSyAapZ/inputs/pymol_3.1.0+dfsg-1+b3_arm64.buildinfo /srv/rebuilderd/tmp/rebuilderdSyAapZ/inputs/pymol_3.1.0+dfsg-1+b3_arm64.buildinfo contains a GPG signature which has NOT been validated Using defined Build-Path: /build/reproducible-path/pymol-3.1.0+dfsg I: verifying dsc... successful! Get:1 http://deb.debian.org/debian unstable InRelease [187 kB] Get:2 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable InRelease [187 kB] Get:3 http://deb.debian.org/debian unstable/main arm64 Packages [10.3 MB] Get:4 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 Packages [10.3 MB] Fetched 21.0 MB in 2s (10.8 MB/s) Reading package lists... W: http://snapshot.debian.org/archive/debian/20260404T082424Z/dists/unstable/InRelease: Loading /etc/apt/trusted.gpg from deprecated option Dir::Etc::Trusted Get:1 http://deb.debian.org/debian unstable/main arm64 libpython3-all-dev arm64 3.13.9-3 [1072 B] Fetched 1072 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps8l493dx/libpython3-all-dev_3.13.9-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libkpathsea6 arm64 2025.20250727.75242+ds-5+b2 [152 kB] Fetched 152 kB in 0s (9160 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0wq1r3l7/libkpathsea6_2025.20250727.75242+ds-5+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libmpfr6 arm64 4.2.2-3 [691 kB] Fetched 691 kB in 0s (30.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjjwly_pg/libmpfr6_4.2.2-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 krb5-multidev arm64 1.22.1-2 [127 kB] Fetched 127 kB in 0s (6174 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpa1ot8nqy/krb5-multidev_1.22.1-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libdrm2 arm64 2.4.131-1 [38.3 kB] Fetched 38.3 kB in 0s (2504 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdf0o50x5/libdrm2_2.4.131-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgl1 arm64 1.7.0-3 [89.9 kB] Fetched 89.9 kB in 0s (4754 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplzxv3qrj/libgl1_1.7.0-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxkbcommon-x11-0 arm64 1.13.1-1 [19.7 kB] Fetched 19.7 kB in 0s (1739 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp305bfhn0/libxkbcommon-x11-0_1.13.1-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpng-dev arm64 1.6.56-1 [361 kB] Fetched 361 kB in 0s (29.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgflzahh_/libpng-dev_1.6.56-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 tar arm64 1.35+dfsg-4 [802 kB] Fetched 802 kB in 0s (38.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkk8oru_s/tar_1.35+dfsg-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxkbcommon0 arm64 1.13.1-1 [136 kB] Fetched 136 kB in 0s (8943 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9yqjzpty/libxkbcommon0_1.13.1-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Fetched 104 kB in 0s (7089 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjtkqwkeq/libarchive-zip-perl_1.68-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 dash arm64 0.5.12-12+b1 [95.6 kB] Fetched 95.6 kB in 0s (5472 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvxc3ihim/dash_0.5.12-12+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgomp1 arm64 16-20260322-1 [131 kB] Fetched 131 kB in 0s (8836 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfcu4wzgr/libgomp1_16-20260322-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 perl-base arm64 5.40.1-7 [1528 kB] Fetched 1528 kB in 0s (52.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyhxcrfmk/perl-base_5.40.1-7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libx11-6 arm64 2:1.8.13-1 [799 kB] Fetched 799 kB in 0s (34.5 MB/s) dpkg-name: info: moved 'libx11-6_2%3a1.8.13-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpmn6k1d10/libx11-6_1.8.13-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libegl1 arm64 1.7.0-3 [34.1 kB] Fetched 34.1 kB in 0s (1969 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9cqdi1hw/libegl1_1.7.0-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 g++ arm64 4:15.2.0-5 [1332 B] Fetched 1332 B in 0s (78.7 kB/s) dpkg-name: info: moved 'g++_4%3a15.2.0-5_arm64.deb' to '/srv/rebuilderd/tmp/tmp0reg8jch/g++_15.2.0-5_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 libinput-bin arm64 1.31.0-1 [28.7 kB] Fetched 28.7 kB in 0s (1719 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp61pfj1e5/libinput-bin_1.31.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libqt5opengl5t64 arm64 5.15.17+dfsg-7+b1 [137 kB] Fetched 137 kB in 0s (8854 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwq3ri6av/libqt5opengl5t64_5.15.17+dfsg-7+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libdouble-conversion3 arm64 3.4.0-1 [37.7 kB] Fetched 37.7 kB in 0s (2970 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_jif0kma/libdouble-conversion3_3.4.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libudev1 arm64 260.1-1 [123 kB] Fetched 123 kB in 0s (7245 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzsebsbjo/libudev1_260.1-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libtsan2 arm64 16-20260322-1 [2449 kB] Fetched 2449 kB in 0s (68.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0hxuxlk_/libtsan2_16-20260322-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libsm-dev arm64 2:1.2.6-1+b1 [40.4 kB] Fetched 40.4 kB in 0s (1996 kB/s) dpkg-name: info: moved 'libsm-dev_2%3a1.2.6-1+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmpfas71ian/libsm-dev_1.2.6-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libicu78 arm64 78.3-1 [9804 kB] Fetched 9804 kB in 0s (179 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8i6stbaw/libicu78_78.3-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgssapi-krb5-2 arm64 1.22.1-2 [127 kB] Fetched 127 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphaf3mpso/libgssapi-krb5-2_1.22.1-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libtinfo6 arm64 6.6+20251231-1 [346 kB] Fetched 346 kB in 0s (18.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuut99_ko/libtinfo6_6.6+20251231-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 libblkid1 arm64 2.42-1 [164 kB] Fetched 164 kB in 0s (11.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl5t3bc7a/libblkid1_2.42-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxpm4 arm64 1:3.5.17-1+b4 [52.9 kB] Fetched 52.9 kB in 0s (3342 kB/s) dpkg-name: info: moved 'libxpm4_1%3a3.5.17-1+b4_arm64.deb' to '/srv/rebuilderd/tmp/tmpfvd4x2j5/libxpm4_3.5.17-1+b4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 sensible-utils all 0.0.26 [27.0 kB] Fetched 27.0 kB in 0s (1609 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbdqebtlm/sensible-utils_0.0.26_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libc-bin arm64 2.42-14 [530 kB] Fetched 530 kB in 0s (52.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpat6kf7i9/libc-bin_2.42-14_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libqt5core5t64 arm64 5.15.17+dfsg-7+b1 [1805 kB] Fetched 1805 kB in 0s (85.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpofyd2o8p/libqt5core5t64_5.15.17+dfsg-7+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libhdf5-hl-310 arm64 1.14.6+repack-2 [61.3 kB] Fetched 61.3 kB in 0s (4080 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptmse7egv/libhdf5-hl-310_1.14.6+repack-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libbsd0 arm64 0.12.2-2+b1 [130 kB] Fetched 130 kB in 0s (8653 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2jpdchd5/libbsd0_0.12.2-2+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libglx0 arm64 1.7.0-3 [31.5 kB] Fetched 31.5 kB in 0s (2135 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6kb9kayq/libglx0_1.7.0-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgcc-s1 arm64 16-20260322-1 [53.2 kB] Fetched 53.2 kB in 0s (3744 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy81zr0fi/libgcc-s1_16-20260322-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 sysvinit-utils arm64 3.18-1 [29.6 kB] Fetched 29.6 kB in 0s (2036 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp72du3jdr/sysvinit-utils_3.18-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 ncurses-base all 6.6+20251231-1 [277 kB] Fetched 277 kB in 0s (18.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3dhdosmg/ncurses-base_6.6+20251231-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 binutils-aarch64-linux-gnu arm64 2.46-3 [867 kB] Fetched 867 kB in 0s (50.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4gdswwb4/binutils-aarch64-linux-gnu_2.46-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libseccomp2 arm64 2.6.0-2+b1 [50.9 kB] Fetched 50.9 kB in 0s (3424 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplvdnwplw/libseccomp2_2.6.0-2+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libhdf5-cpp-310 arm64 1.14.6+repack-2 [117 kB] Fetched 117 kB in 0s (8054 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpi9pp9pqt/libhdf5-cpp-310_1.14.6+repack-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libhdf5-hl-cpp-310 arm64 1.14.6+repack-2 [20.0 kB] Fetched 20.0 kB in 0s (1391 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz0s4i765/libhdf5-hl-cpp-310_1.14.6+repack-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libsqlite3-0 arm64 3.46.1-9+b1 [851 kB] Fetched 851 kB in 0s (30.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3jdh_tct/libsqlite3-0_3.46.1-9+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libnetcdf-dev arm64 1:4.10.0-1 [122 kB] Fetched 122 kB in 0s (8318 kB/s) dpkg-name: info: moved 'libnetcdf-dev_1%3a4.10.0-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpjr7n4g4e/libnetcdf-dev_4.10.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgles2 arm64 1.7.0-3 [18.1 kB] Fetched 18.1 kB in 0s (1786 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpukgrldha/libgles2_1.7.0-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpam-modules-bin arm64 1.7.0-5+b1 [48.0 kB] Fetched 48.0 kB in 0s (3241 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3446d54u/libpam-modules-bin_1.7.0-5+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpython3.13-dev arm64 3.13.12-1 [5035 kB] Fetched 5035 kB in 0s (29.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3crtjlf9/libpython3.13-dev_3.13.12-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 pkgconf arm64 2.5.1-4 [33.6 kB] Fetched 33.6 kB in 0s (1901 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc2egyybe/pkgconf_2.5.1-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-autocommand all 2.2.2-4 [13.7 kB] Fetched 13.7 kB in 0s (860 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptdd6_h9z/python3-autocommand_2.2.2-4_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb-render-util0 arm64 0.3.10-1+b1 [18.6 kB] Fetched 18.6 kB in 0s (1142 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv1pm9ulp/libxcb-render-util0_0.3.10-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb-sync1 arm64 1.17.0-2+b2 [109 kB] Fetched 109 kB in 0s (7332 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpi4h_ria8/libxcb-sync1_1.17.0-2+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 perl-modules-5.40 all 5.40.1-7 [3012 kB] Fetched 3012 kB in 0s (158 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptb52uiex/perl-modules-5.40_5.40.1-7_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-typeguard all 4.4.4-2 [37.2 kB] Fetched 37.2 kB in 0s (3344 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpker0ya_4/python3-typeguard_4.4.4-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libnghttp3-dev arm64 1.15.0-1 [90.6 kB] Fetched 90.6 kB in 0s (5655 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb6kvuptl/libnghttp3-dev_1.15.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 cpp-15 arm64 15.2.0-16 [1280 B] Fetched 1280 B in 0s (82.0 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpf2445acd/cpp-15_15.2.0-16_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libtasn1-6-dev arm64 4.21.0-2 [97.3 kB] Fetched 97.3 kB in 0s (5983 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnxogb96d/libtasn1-6-dev_4.21.0-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libngtcp2-crypto-ossl0 arm64 1.21.0-1 [24.2 kB] Fetched 24.2 kB in 0s (1660 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppis58im2/libngtcp2-crypto-ossl0_1.21.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libc6-dev arm64 2.42-14 [1617 kB] Fetched 1617 kB in 0s (55.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppjd777tr/libc6-dev_2.42-14_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libedit2 arm64 3.1-20251016-1 [88.7 kB] Fetched 88.7 kB in 0s (5714 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpegnk9185/libedit2_3.1-20251016-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 nettle-dev arm64 3.10.2-1 [1319 kB] Fetched 1319 kB in 0s (70.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdns29t8d/nettle-dev_3.10.2-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libglm-dev all 1.0.1+ds-3 [196 kB] Fetched 196 kB in 0s (10.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6_7c0eyk/libglm-dev_1.0.1+ds-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpixman-1-0 arm64 0.46.4-1+b1 [174 kB] Fetched 174 kB in 0s (9938 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqqosxbwz/libpixman-1-0_0.46.4-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libperl5.40 arm64 5.40.1-7 [4134 kB] Fetched 4134 kB in 0s (155 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps5ml99z4/libperl5.40_5.40.1-7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb-image0 arm64 0.4.0-2+b3 [21.8 kB] Fetched 21.8 kB in 0s (1271 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz3qis5vl/libxcb-image0_0.4.0-2+b3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgmpxx4ldbl arm64 2:6.3.0+dfsg-5+b1 [329 kB] Fetched 329 kB in 0s (29.1 MB/s) dpkg-name: info: moved 'libgmpxx4ldbl_2%3a6.3.0+dfsg-5+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmpnubna7n9/libgmpxx4ldbl_6.3.0+dfsg-5+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 libpython3.14 arm64 3.14.3-5 [2243 kB] Fetched 2243 kB in 0s (105 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt4suj6_v/libpython3.14_3.14.3-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libglx-mesa0 arm64 26.0.4-1 [109 kB] Fetched 109 kB in 0s (8441 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdl0aj6do/libglx-mesa0_26.0.4-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 libselinux1 arm64 3.9-4+b1 [80.8 kB] Fetched 80.8 kB in 0s (4694 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3jsy2vqc/libselinux1_3.9-4+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpython3.13-minimal arm64 3.13.12-1 [860 kB] Fetched 860 kB in 0s (25.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_kew_jpt/libpython3.13-minimal_3.13.12-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb-keysyms1 arm64 0.4.1-1+b1 [17.1 kB] Fetched 17.1 kB in 0s (969 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1r4j3f6n/libxcb-keysyms1_0.4.1-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 pkgconf-bin arm64 2.5.1-4 [35.1 kB] Fetched 35.1 kB in 0s (2146 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpryd8at9z/pkgconf-bin_2.5.1-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 librtmp-dev arm64 2.4+20151223.gitfa8646d.1-3+b1 [68.5 kB] Fetched 68.5 kB in 0s (3959 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp30_9dh3s/librtmp-dev_2.4+20151223.gitfa8646d.1-3+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libkrb5-3 arm64 1.22.1-2 [315 kB] Fetched 315 kB in 0s (15.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7hiquqkt/libkrb5-3_1.22.1-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 liblsan0 arm64 16-20260322-1 [1213 kB] Fetched 1213 kB in 0s (45.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1zrdfw9z/liblsan0_16-20260322-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxml2-dev arm64 2.15.2+dfsg-0.1 [720 kB] Fetched 720 kB in 0s (38.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzn1wei8i/libxml2-dev_2.15.2+dfsg-0.1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libssh2-1-dev arm64 1.11.1-2 [387 kB] Fetched 387 kB in 0s (17.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1s95f2s3/libssh2-1-dev_1.11.1-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-typing-extensions all 4.15.0-2 [92.5 kB] Fetched 92.5 kB in 0s (4051 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcrhr7wgm/python3-typing-extensions_4.15.0-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 dpkg arm64 1.23.7 [1512 kB] Fetched 1512 kB in 0s (53.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfhk_emhv/dpkg_1.23.7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libqt5gui5t64 arm64 5.15.17+dfsg-7+b1 [3248 kB] Fetched 3248 kB in 0s (77.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph_kjapgy/libqt5gui5t64_5.15.17+dfsg-7+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libcairo2 arm64 1.18.4-3 [479 kB] Fetched 479 kB in 0s (24.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0sbcmkd8/libcairo2_1.18.4-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 init-system-helpers all 1.69 [39.3 kB] Fetched 39.3 kB in 0s (2485 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv7g4hvtf/init-system-helpers_1.69_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libzstd1 arm64 1.5.7+dfsg-3+b1 [261 kB] Fetched 261 kB in 0s (19.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt0j0ddv2/libzstd1_1.5.7+dfsg-3+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libzzip-0-13t64 arm64 0.13.78+dfsg.1-0.2 [59.4 kB] Fetched 59.4 kB in 0s (2852 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppybux2pr/libzzip-0-13t64_0.13.78+dfsg.1-0.2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libglut-dev arm64 3.4.0-6+b1 [164 kB] Fetched 164 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd5kwh4v4/libglut-dev_3.4.0-6+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 liblz4-1 arm64 1.10.0-8 [66.4 kB] Fetched 66.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmi5sj19o/liblz4-1_1.10.0-8_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-pyqt5 arm64 5.15.11+dfsg-3 [2294 kB] Fetched 2294 kB in 0s (89.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7ew2g5by/python3-pyqt5_5.15.11+dfsg-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libnghttp2-dev arm64 1.68.1-1 [108 kB] Fetched 108 kB in 0s (10.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7sim0zak/libnghttp2-dev_1.68.1-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libkrb5support0 arm64 1.22.1-2 [32.2 kB] Fetched 32.2 kB in 0s (3214 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpw_dsq8je/libkrb5support0_1.22.1-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libkadm5clnt-mit12 arm64 1.22.1-2 [40.7 kB] Fetched 40.7 kB in 0s (2365 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6gboznr1/libkadm5clnt-mit12_1.22.1-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 gcc-15 arm64 15.2.0-16 [529 kB] Fetched 529 kB in 0s (29.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj7f5cyiy/gcc-15_15.2.0-16_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libx11-data all 2:1.8.13-1 [346 kB] Fetched 346 kB in 0s (19.8 MB/s) dpkg-name: info: moved 'libx11-data_2%3a1.8.13-1_all.deb' to '/srv/rebuilderd/tmp/tmpthsjyuas/libx11-data_1.8.13-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 diffutils arm64 1:3.12-1+b1 [398 kB] Fetched 398 kB in 0s (27.4 MB/s) dpkg-name: info: moved 'diffutils_1%3a3.12-1+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmp8tipb9b6/diffutils_3.12-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3.13-dev arm64 3.13.12-1 [504 kB] Fetched 504 kB in 0s (21.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp92n8hrkd/python3.13-dev_3.13.12-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgprofng0 arm64 2.46-3 [681 kB] Fetched 681 kB in 0s (58.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgcqvpgwg/libgprofng0_2.46-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3 arm64 3.13.9-3 [27.6 kB] Fetched 27.6 kB in 0s (1278 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp73813she/python3_3.13.9-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libx11-xcb1 arm64 2:1.8.13-1 [250 kB] Fetched 250 kB in 0s (14.3 MB/s) dpkg-name: info: moved 'libx11-xcb1_2%3a1.8.13-1_arm64.deb' to '/srv/rebuilderd/tmp/tmp_3g9byit/libx11-xcb1_1.8.13-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb-icccm4 arm64 0.4.2-1+b1 [27.4 kB] Fetched 27.4 kB in 0s (1550 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6kksq_5t/libxcb-icccm4_0.4.2-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libqt5dbus5t64 arm64 5.15.17+dfsg-7+b1 [196 kB] Fetched 196 kB in 0s (10.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpi2tlnfqn/libqt5dbus5t64_5.15.17+dfsg-7+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 librhash1 arm64 1.4.6-1.1 [128 kB] Fetched 128 kB in 0s (6654 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5c55grhp/librhash1_1.4.6-1.1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 python3.14 arm64 3.14.3-5 [830 kB] Fetched 830 kB in 0s (57.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdm0tkamz/python3.14_3.14.3-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libglvnd0 arm64 1.7.0-3 [41.5 kB] Fetched 41.5 kB in 0s (2233 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnxnr8jx8/libglvnd0_1.7.0-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libtasn1-6 arm64 4.21.0-2 [48.0 kB] Fetched 48.0 kB in 0s (3127 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpokf8jhs8/libtasn1-6_4.21.0-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb-util1 arm64 0.4.1-1+b1 [23.7 kB] Fetched 23.7 kB in 0s (1073 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpaf41r_im/libxcb-util1_0.4.1-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libnghttp3-9 arm64 1.15.0-1 [61.9 kB] Fetched 61.9 kB in 0s (5909 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps5gt4zuf/libnghttp3-9_1.15.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-inflect all 7.5.0-1 [33.0 kB] Fetched 33.0 kB in 0s (2570 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkcbmecaj/python3-inflect_7.5.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libaec-dev arm64 1.1.6-1 [24.2 kB] Fetched 24.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpa189w3zd/libaec-dev_1.1.6-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libnettle8t64 arm64 3.10.2-1 [305 kB] Fetched 305 kB in 0s (15.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfu0h79ey/libnettle8t64_3.10.2-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb-randr0 arm64 1.17.0-2+b2 [116 kB] Fetched 116 kB in 0s (6181 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpeiqgu7v4/libxcb-randr0_1.17.0-2+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libdrm-amdgpu1 arm64 2.4.131-1 [23.3 kB] Fetched 23.3 kB in 0s (860 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpswc_nc63/libdrm-amdgpu1_2.4.131-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libcap-ng0 arm64 0.9.2-1 [16.4 kB] Fetched 16.4 kB in 0s (1037 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppee_pbg1/libcap-ng0_0.9.2-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-zipp all 3.23.0-1 [11.0 kB] Fetched 11.0 kB in 0s (627 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7yd62gww/python3-zipp_3.23.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 gcc-15-base arm64 15.2.0-16 [36.3 kB] Fetched 36.3 kB in 0s (1979 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv_entlaw/gcc-15-base_15.2.0-16_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libfreetype-dev arm64 2.14.3+dfsg-1 [634 kB] Fetched 634 kB in 0s (30.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqvtv8hdx/libfreetype-dev_2.14.3+dfsg-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libsm6 arm64 2:1.2.6-1+b1 [36.7 kB] Fetched 36.7 kB in 0s (2089 kB/s) dpkg-name: info: moved 'libsm6_2%3a1.2.6-1+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmpfhek281u/libsm6_1.2.6-1+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 libpython3.14-minimal arm64 3.14.3-5 [885 kB] Fetched 885 kB in 0s (30.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsb4xr7xi/libpython3.14-minimal_3.14.3-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpaper2 arm64 2.2.5-0.3+b3 [16.6 kB] Fetched 16.6 kB in 0s (776 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzjtinyho/libpaper2_2.2.5-0.3+b3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libffi8 arm64 3.5.2-4 [22.2 kB] Fetched 22.2 kB in 0s (1339 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpg6y1fegf/libffi8_3.5.2-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libhwasan0 arm64 16-20260322-1 [1507 kB] Fetched 1507 kB in 0s (77.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_ddx3l8u/libhwasan0_16-20260322-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libsensors-config all 1:3.6.2-2 [16.2 kB] Fetched 16.2 kB in 0s (0 B/s) dpkg-name: info: moved 'libsensors-config_1%3a3.6.2-2_all.deb' to '/srv/rebuilderd/tmp/tmp_94hat3_/libsensors-config_3.6.2-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 gzip arm64 1.13-1+b1 [135 kB] Fetched 135 kB in 0s (8016 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3wwuiwni/gzip_1.13-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libjsoncpp26 arm64 1.9.6-5 [72.4 kB] Fetched 72.4 kB in 0s (4536 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1_bfwz2f/libjsoncpp26_1.9.6-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 texlive-binaries arm64 2025.20250727.75242+ds-5+b2 [7439 kB] Fetched 7439 kB in 0s (171 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqittiwbk/texlive-binaries_2025.20250727.75242+ds-5+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libqt5widgets5t64 arm64 5.15.17+dfsg-7+b1 [2260 kB] Fetched 2260 kB in 0s (104 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpk1lpwwsi/libqt5widgets5t64_5.15.17+dfsg-7+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libacl1 arm64 2.3.2-3 [31.8 kB] Fetched 31.8 kB in 0s (2431 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc4sct58q/libacl1_2.3.2-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-pyqt5.sip arm64 12.17.2-1 [76.3 kB] Fetched 76.3 kB in 0s (5905 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy2zxxh24/python3-pyqt5.sip_12.17.2-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-jaraco.text all 4.0.0-1 [11.4 kB] Fetched 11.4 kB in 0s (496 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwcf4728_/python3-jaraco.text_4.0.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-pyqt5.qtopengl arm64 5.15.11+dfsg-3 [198 kB] Fetched 198 kB in 0s (13.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpswb9wzuy/python3-pyqt5.qtopengl_5.15.11+dfsg-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libavahi-common3 arm64 0.8-18 [43.4 kB] Fetched 43.4 kB in 0s (2433 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnz4_3jlt/libavahi-common3_0.8-18_arm64.deb' Downloading dependency 1 of 426: libpython3-all-dev:arm64=3.13.9-3 Downloading dependency 2 of 426: libkpathsea6:arm64=2025.20250727.75242+ds-5+b2 Downloading dependency 3 of 426: libmpfr6:arm64=4.2.2-3 Downloading dependency 4 of 426: krb5-multidev:arm64=1.22.1-2 Downloading dependency 5 of 426: libdrm2:arm64=2.4.131-1 Downloading dependency 6 of 426: libgl1:arm64=1.7.0-3 Downloading dependency 7 of 426: libxkbcommon-x11-0:arm64=1.13.1-1 Downloading dependency 8 of 426: libpng-dev:arm64=1.6.56-1 Downloading dependency 9 of 426: tar:arm64=1.35+dfsg-4 Downloading dependency 10 of 426: libxkbcommon0:arm64=1.13.1-1 Downloading dependency 11 of 426: libarchive-zip-perl:arm64=1.68-1 Downloading dependency 12 of 426: dash:arm64=0.5.12-12+b1 Downloading dependency 13 of 426: libgomp1:arm64=16-20260322-1 Downloading dependency 14 of 426: perl-base:arm64=5.40.1-7 Downloading dependency 15 of 426: libx11-6:arm64=2:1.8.13-1 Downloading dependency 16 of 426: libegl1:arm64=1.7.0-3 Downloading dependency 17 of 426: g++:arm64=4:15.2.0-5 Downloading dependency 18 of 426: libinput-bin:arm64=1.31.0-1 Downloading dependency 19 of 426: libqt5opengl5t64:arm64=5.15.17+dfsg-7+b1 Downloading dependency 20 of 426: libdouble-conversion3:arm64=3.4.0-1 Downloading dependency 21 of 426: libudev1:arm64=260.1-1 Downloading dependency 22 of 426: libtsan2:arm64=16-20260322-1 Downloading dependency 23 of 426: libsm-dev:arm64=2:1.2.6-1+b1 Downloading dependency 24 of 426: libicu78:arm64=78.3-1 Downloading dependency 25 of 426: libgssapi-krb5-2:arm64=1.22.1-2 Downloading dependency 26 of 426: libtinfo6:arm64=6.6+20251231-1 Downloading dependency 27 of 426: libblkid1:arm64=2.42-1 Downloading dependency 28 of 426: libxpm4:arm64=1:3.5.17-1+b4 Downloading dependency 29 of 426: sensible-utils:arm64=0.0.26 Downloading dependency 30 of 426: libc-bin:arm64=2.42-14 Downloading dependency 31 of 426: libqt5core5t64:arm64=5.15.17+dfsg-7+b1 Downloading dependency 32 of 426: libhdf5-hl-310:arm64=1.14.6+repack-2 Downloading dependency 33 of 426: libbsd0:arm64=0.12.2-2+b1 Downloading dependency 34 of 426: libglx0:arm64=1.7.0-3 Downloading dependency 35 of 426: libgcc-s1:arm64=16-20260322-1 Downloading dependency 36 of 426: sysvinit-utils:arm64=3.18-1 Downloading dependency 37 of 426: ncurses-base:arm64=6.6+20251231-1 Downloading dependency 38 of 426: binutils-aarch64-linux-gnu:arm64=2.46-3 Downloading dependency 39 of 426: libseccomp2:arm64=2.6.0-2+b1 Downloading dependency 40 of 426: libhdf5-cpp-310:arm64=1.14.6+repack-2 Downloading dependency 41 of 426: libhdf5-hl-cpp-310:arm64=1.14.6+repack-2 Downloading dependency 42 of 426: libsqlite3-0:arm64=3.46.1-9+b1 Downloading dependency 43 of 426: libnetcdf-dev:arm64=1:4.10.0-1 Downloading dependency 44 of 426: libgles2:arm64=1.7.0-3 Downloading dependency 45 of 426: libpam-modules-bin:arm64=1.7.0-5+b1 Downloading dependency 46 of 426: libpython3.13-dev:arm64=3.13.12-1 Downloading dependency 47 of 426: pkgconf:arm64=2.5.1-4 Downloading dependency 48 of 426: python3-autocommand:arm64=2.2.2-4 Downloading dependency 49 of 426: libxcb-render-util0:arm64=0.3.10-1+b1 Downloading dependency 50 of 426: libxcb-sync1:arm64=1.17.0-2+b2 Downloading dependency 51 of 426: perl-modules-5.40:arm64=5.40.1-7 Downloading dependency 52 of 426: python3-typeguard:arm64=4.4.4-2 Downloading dependency 53 of 426: libnghttp3-dev:arm64=1.15.0-1 Downloading dependency 54 of 426: cpp-15:arm64=15.2.0-16 Downloading dependency 55 of 426: libtasn1-6-dev:arm64=4.21.0-2 Downloading dependency 56 of 426: libngtcp2-crypto-ossl0:arm64=1.21.0-1 Downloading dependency 57 of 426: libc6-dev:arm64=2.42-14 Downloading dependency 58 of 426: libedit2:arm64=3.1-20251016-1 Downloading dependency 59 of 426: nettle-dev:arm64=3.10.2-1 Downloading dependency 60 of 426: libglm-dev:arm64=1.0.1+ds-3 Downloading dependency 61 of 426: libpixman-1-0:arm64=0.46.4-1+b1 Downloading dependency 62 of 426: libperl5.40:arm64=5.40.1-7 Downloading dependency 63 of 426: libxcb-image0:arm64=0.4.0-2+b3 Downloading dependency 64 of 426: libgmpxx4ldbl:arm64=2:6.3.0+dfsg-5+b1 Downloading dependency 65 of 426: libpython3.14:arm64=3.14.3-5 Downloading dependency 66 of 426: libglx-mesa0:arm64=26.0.4-1 Downloading dependency 67 of 426: libselinux1:arm64=3.9-4+b1 Downloading dependency 68 of 426: libpython3.13-minimal:arm64=3.13.12-1 Downloading dependency 69 of 426: libxcb-keysyms1:arm64=0.4.1-1+b1 Downloading dependency 70 of 426: pkgconf-bin:arm64=2.5.1-4 Downloading dependency 71 of 426: librtmp-dev:arm64=2.4+20151223.gitfa8646d.1-3+b1 Downloading dependency 72 of 426: libkrb5-3:arm64=1.22.1-2 Downloading dependency 73 of 426: liblsan0:arm64=16-20260322-1 Downloading dependency 74 of 426: libxml2-dev:arm64=2.15.2+dfsg-0.1 Downloading dependency 75 of 426: libssh2-1-dev:arm64=1.11.1-2 Downloading dependency 76 of 426: python3-typing-extensions:arm64=4.15.0-2 Downloading dependency 77 of 426: dpkg:arm64=1.23.7 Downloading dependency 78 of 426: libqt5gui5t64:arm64=5.15.17+dfsg-7+b1 Downloading dependency 79 of 426: libcairo2:arm64=1.18.4-3 Downloading dependency 80 of 426: init-system-helpers:arm64=1.69 Downloading dependency 81 of 426: libzstd1:arm64=1.5.7+dfsg-3+b1 Downloading dependency 82 of 426: libzzip-0-13t64:arm64=0.13.78+dfsg.1-0.2 Downloading dependency 83 of 426: libglut-dev:arm64=3.4.0-6+b1 Downloading dependency 84 of 426: liblz4-1:arm64=1.10.0-8 Downloading dependency 85 of 426: python3-pyqt5:arm64=5.15.11+dfsg-3 Downloading dependency 86 of 426: libnghttp2-dev:arm64=1.68.1-1 Downloading dependency 87 of 426: libkrb5support0:arm64=1.22.1-2 Downloading dependency 88 of 426: libkadm5clnt-mit12:arm64=1.22.1-2 Downloading dependency 89 of 426: gcc-15:arm64=15.2.0-16 Downloading dependency 90 of 426: libx11-data:arm64=2:1.8.13-1 Downloading dependency 91 of 426: diffutils:arm64=1:3.12-1+b1 Downloading dependency 92 of 426: python3.13-dev:arm64=3.13.12-1 Downloading dependency 93 of 426: libgprofng0:arm64=2.46-3 Downloading dependency 94 of 426: python3:arm64=3.13.9-3 Downloading dependency 95 of 426: libx11-xcb1:arm64=2:1.8.13-1 Downloading dependency 96 of 426: libxcb-icccm4:arm64=0.4.2-1+b1 Downloading dependency 97 of 426: libqt5dbus5t64:arm64=5.15.17+dfsg-7+b1 Downloading dependency 98 of 426: librhash1:arm64=1.4.6-1.1 Downloading dependency 99 of 426: python3.14:arm64=3.14.3-5 Downloading dependency 100 of 426: libglvnd0:arm64=1.7.0-3 Downloading dependency 101 of 426: libtasn1-6:arm64=4.21.0-2 Downloading dependency 102 of 426: libxcb-util1:arm64=0.4.1-1+b1 Downloading dependency 103 of 426: libnghttp3-9:arm64=1.15.0-1 Downloading dependency 104 of 426: python3-inflect:arm64=7.5.0-1 Downloading dependency 105 of 426: libaec-dev:arm64=1.1.6-1 Downloading dependency 106 of 426: libnettle8t64:arm64=3.10.2-1 Downloading dependency 107 of 426: libxcb-randr0:arm64=1.17.0-2+b2 Downloading dependency 108 of 426: libdrm-amdgpu1:arm64=2.4.131-1 Downloading dependency 109 of 426: libcap-ng0:arm64=0.9.2-1 Downloading dependency 110 of 426: python3-zipp:arm64=3.23.0-1 Downloading dependency 111 of 426: gcc-15-base:arm64=15.2.0-16 Downloading dependency 112 of 426: libfreetype-dev:arm64=2.14.3+dfsg-1 Downloading dependency 113 of 426: libsm6:arm64=2:1.2.6-1+b1 Downloading dependency 114 of 426: libpython3.14-minimal:arm64=3.14.3-5 Downloading dependency 115 of 426: libpaper2:arm64=2.2.5-0.3+b3 Downloading dependency 116 of 426: libffi8:arm64=3.5.2-4 Downloading dependency 117 of 426: libhwasan0:arm64=16-20260322-1 Downloading dependency 118 of 426: libsensors-config:arm64=1:3.6.2-2 Downloading dependency 119 of 426: gzip:arm64=1.13-1+b1 Downloading dependency 120 of 426: libjsoncpp26:arm64=1.9.6-5 Downloading dependency 121 of 426: texlive-binaries:arm64=2025.20250727.75242+ds-5+b2 Downloading dependency 122 of 426: libqt5widgets5t64:arm64=5.15.17+dfsg-7+b1 Downloading dependency 123 of 426: libacl1:arm64=2.3.2-3 Downloading dependency 124 of 426: python3-pyqt5.sip:arm64=12.17.2-1 Downloading dependency 125 of 426: python3-jaraco.text:arm64=4.0.0-1 Downloading dependency 126 of 426: python3-pyqt5.qtopengl:arm64=5.15.11+dfsg-3 Downloading dependency 127 of 426: libavahi-common3:arm64=0.8-18 Downloading dependency 128 of 426: libelf1t64:arm64=0.194-4Get:1 http://deb.debian.org/debian unstable/main arm64 libelf1t64 arm64 0.194-4 [182 kB] Fetched 182 kB in 0s (8569 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9dhpj_cn/libelf1t64_0.194-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb-xinerama0 arm64 1.17.0-2+b2 [105 kB] Fetched 105 kB in 0s (10.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplji_jjs0/libxcb-xinerama0_1.17.0-2+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libc-gconv-modules-extra arm64 2.42-14 [1130 kB] Fetched 1130 kB in 0s (48.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpox4lpw1l/libc-gconv-modules-extra_2.42-14_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 m4 arm64 1.4.21-1 [323 kB] Fetched 323 kB in 0s (16.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd6ztjz5_/m4_1.4.21-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libcurl3t64-gnutls arm64 8.19.0-3 [362 kB] Fetched 362 kB in 0s (27.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjx00cejc/libcurl3t64-gnutls_8.19.0-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 patch arm64 2.8-2+b1 [128 kB] Fetched 128 kB in 0s (5558 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp98hullo_/patch_2.8-2+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libproc2-0 arm64 2:4.0.4-9+b1 [62.4 kB] Fetched 62.4 kB in 0s (3817 kB/s) dpkg-name: info: moved 'libproc2-0_2%3a4.0.4-9+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmplqftej1s/libproc2-0_4.0.4-9+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 fonts-dejavu-core all 2.37-8 [840 kB] Fetched 840 kB in 0s (59.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd9iej5af/fonts-dejavu-core_2.37-8_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3.13 arm64 3.13.12-1 [776 kB] Fetched 776 kB in 0s (33.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9jtar_94/python3.13_3.13.12-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpkgconf7 arm64 2.5.1-4 [45.5 kB] Fetched 45.5 kB in 0s (2973 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvzlpc5j5/libpkgconf7_2.5.1-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libexpat1-dev arm64 2.7.5-1 [152 kB] Fetched 152 kB in 0s (9601 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprpeuxfn2/libexpat1-dev_2.7.5-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxrender1 arm64 1:0.9.12-1+b1 [27.2 kB] Fetched 27.2 kB in 0s (1521 kB/s) dpkg-name: info: moved 'libxrender1_1%3a0.9.12-1+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmpi8_0kmi_/libxrender1_0.9.12-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgl1-mesa-dri arm64 26.0.4-1 [42.6 kB] Fetched 42.6 kB in 0s (2420 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3con4f__/libgl1-mesa-dri_26.0.4-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libfontconfig1 arm64 2.17.1-5 [125 kB] Fetched 125 kB in 0s (7427 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3s6d1wpz/libfontconfig1_2.17.1-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libjpeg62-turbo arm64 1:2.1.5-4 [173 kB] Fetched 173 kB in 0s (9041 kB/s) dpkg-name: info: moved 'libjpeg62-turbo_1%3a2.1.5-4_arm64.deb' to '/srv/rebuilderd/tmp/tmprmkl1a4c/libjpeg62-turbo_2.1.5-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libsensors5 arm64 1:3.6.2-2+b1 [36.8 kB] Fetched 36.8 kB in 0s (3571 kB/s) dpkg-name: info: moved 'libsensors5_1%3a3.6.2-2+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmp35x7jrst/libsensors5_3.6.2-2+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb-glx0 arm64 1.17.0-2+b2 [122 kB] Fetched 122 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn79qup_9/libxcb-glx0_1.17.0-2+b2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 libglew-dev arm64 2.3.1-3 [171 kB] Fetched 171 kB in 0s (8778 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6eg8bjjl/libglew-dev_2.3.1-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 dpkg-dev all 1.23.7 [1318 kB] Fetched 1318 kB in 0s (44.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9aliki2_/dpkg-dev_1.23.7_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libc-dev-bin arm64 2.42-14 [36.4 kB] Fetched 36.4 kB in 0s (1705 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqrbnidx5/libc-dev-bin_2.42-14_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb1-dev arm64 1.17.0-2+b2 [182 kB] Fetched 182 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2mhea6mj/libxcb1-dev_1.17.0-2+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgdbm-compat4t64 arm64 1.26-1+b1 [53.0 kB] Fetched 53.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp699di9te/libgdbm-compat4t64_1.26-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libzstd-dev arm64 1.5.7+dfsg-3+b1 [330 kB] Fetched 330 kB in 0s (8394 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprwoggysy/libzstd-dev_1.5.7+dfsg-3+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-opengl all 3.1.10+dfsg-1 [624 kB] Fetched 624 kB in 0s (18.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7_wwyl4m/python3-opengl_3.1.10+dfsg-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpython3.13 arm64 3.13.12-1 [2059 kB] Fetched 2059 kB in 0s (55.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp42u22ahw/libpython3.13_3.13.12-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libqt5printsupport5t64 arm64 5.15.17+dfsg-7+b1 [191 kB] Fetched 191 kB in 0s (10.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6_rpn4jk/libqt5printsupport5t64_5.15.17+dfsg-7+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 dh-python all 7.20260309 [114 kB] Fetched 114 kB in 0s (3759 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpog08rsez/dh-python_7.20260309_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libptexenc1 arm64 2025.20250727.75242+ds-5+b2 [50.3 kB] Fetched 50.3 kB in 0s (2978 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph3f3ytfn/libptexenc1_2025.20250727.75242+ds-5+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgfortran5 arm64 16-20260322-1 [371 kB] Fetched 371 kB in 0s (17.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpga7eu5qt/libgfortran5_16-20260322-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 mesa-libgallium arm64 26.0.4-1 [10.5 MB] Fetched 10.5 MB in 0s (119 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcap99qxk/mesa-libgallium_26.0.4-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libsynctex2 arm64 2025.20250727.75242+ds-5+b2 [58.8 kB] Fetched 58.8 kB in 0s (5732 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyrjf0r7a/libsynctex2_2025.20250727.75242+ds-5+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxau-dev arm64 1:1.0.11-1+b1 [24.1 kB] Fetched 24.1 kB in 0s (502 kB/s) dpkg-name: info: moved 'libxau-dev_1%3a1.0.11-1+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmpjgn573go/libxau-dev_1.0.11-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libglx-dev arm64 1.7.0-3 [15.8 kB] Fetched 15.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxwylxsbg/libglx-dev_1.7.0-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb-shape0 arm64 1.17.0-2+b2 [106 kB] Fetched 106 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuweqntr0/libxcb-shape0_1.17.0-2+b2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 libglew2.3 arm64 2.3.1-3 [158 kB] Fetched 158 kB in 0s (6249 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphlnr2qcm/libglew2.3_2.3.1-3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 linux-libc-dev all 6.19.10-1 [1963 kB] Fetched 1963 kB in 0s (89.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp88uc7n__/linux-libc-dev_6.19.10-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 debianutils arm64 5.23.2+b1 [92.6 kB] Fetched 92.6 kB in 0s (4036 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpryqz4g49/debianutils_5.23.2+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 libmount1 arm64 2.42-1 [198 kB] Fetched 198 kB in 0s (9525 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3tjq1hb1/libmount1_2.42-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libkdb5-10t64 arm64 1.22.1-2 [41.8 kB] Fetched 41.8 kB in 0s (962 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd94do6ri/libkdb5-10t64_1.22.1-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 debhelper all 13.31 [932 kB] Fetched 932 kB in 0s (37.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvfbrte4s/debhelper_13.31_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 comerr-dev arm64 2.1-1.47.4-1 [51.1 kB] Fetched 51.1 kB in 0s (3087 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnedrqgsg/comerr-dev_2.1-1.47.4-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libglut3.12 arm64 3.4.0-6+b1 [134 kB] Fetched 134 kB in 0s (11.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp842yupyp/libglut3.12_3.4.0-6+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 libinput10 arm64 1.31.0-1 [142 kB] Fetched 142 kB in 0s (8673 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8x4apy_m/libinput10_1.31.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libwacom-common all 2.18.0-1 [117 kB] Fetched 117 kB in 0s (6504 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpelqaq2ql/libwacom-common_2.18.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libqt5network5t64 arm64 5.15.17+dfsg-7+b1 [641 kB] Fetched 641 kB in 0s (28.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpa1yhi6bj/libqt5network5t64_5.15.17+dfsg-7+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 fonts-dejavu-mono all 2.37-8 [489 kB] Fetched 489 kB in 0s (42.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnquhhgvo/fonts-dejavu-mono_2.37-8_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 libpython3.14-stdlib arm64 3.14.3-5 [2180 kB] Fetched 2180 kB in 0s (53.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7iiymt33/libpython3.14-stdlib_3.14.3-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libqt5help5 arm64 5.15.17-4+b1 [145 kB] Fetched 145 kB in 0s (5867 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc2v9bsq7/libqt5help5_5.15.17-4+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libattr1 arm64 1:2.5.2-4 [22.7 kB] Fetched 22.7 kB in 0s (1386 kB/s) dpkg-name: info: moved 'libattr1_1%3a2.5.2-4_arm64.deb' to '/srv/rebuilderd/tmp/tmpntqmorml/libattr1_2.5.2-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 gcc-aarch64-linux-gnu arm64 4:15.2.0-5 [1432 B] Fetched 1432 B in 0s (0 B/s) dpkg-name: info: moved 'gcc-aarch64-linux-gnu_4%3a15.2.0-5_arm64.deb' to '/srv/rebuilderd/tmp/tmpujtu2awt/gcc-aarch64-linux-gnu_15.2.0-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 g++-15 arm64 15.2.0-16 [27.1 kB] Fetched 27.1 kB in 0s (975 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2tp8_xx6/g++-15_15.2.0-16_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 cpp-15-aarch64-linux-gnu arm64 15.2.0-16 [10.1 MB] Fetched 10.1 MB in 0s (218 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7ozbi0u4/cpp-15-aarch64-linux-gnu_15.2.0-16_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 xtrans-dev all 1.6.0-1 [93.5 kB] Fetched 93.5 kB in 0s (6738 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqgc_i41i/xtrans-dev_1.6.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb-dri3-0 arm64 1.17.0-2+b2 [107 kB] Fetched 107 kB in 0s (3450 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpclfe2y5l/libxcb-dri3-0_1.17.0-2+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libaudit1 arm64 1:4.1.2-1+b1 [59.7 kB] Fetched 59.7 kB in 0s (0 B/s) dpkg-name: info: moved 'libaudit1_1%3a4.1.2-1+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmpc630rnv6/libaudit1_4.1.2-1+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 xz-utils arm64 5.8.2-2 [703 kB] Fetched 703 kB in 0s (33.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph3uy07dn/xz-utils_5.8.2-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 xdg-utils all 1.2.1-2 [75.8 kB] Fetched 75.8 kB in 0s (6236 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfpvwkf2x/xdg-utils_1.2.1-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 tex-common all 6.20 [29.7 kB] Fetched 29.7 kB in 0s (1696 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvu8y4r6x/tex-common_6.20_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 shared-mime-info arm64 2.4-5+b4 [754 kB] Fetched 754 kB in 0s (50.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpf25os7pc/shared-mime-info_2.4-5+b4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libssl3t64 arm64 3.6.1-3 [2765 kB] Fetched 2765 kB in 0s (137 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2r7xtoei/libssl3t64_3.6.1-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 gcc-15-aarch64-linux-gnu arm64 15.2.0-16 [19.6 MB] Fetched 19.6 MB in 0s (204 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1sv836cu/gcc-15-aarch64-linux-gnu_15.2.0-16_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libnetcdf22 arm64 1:4.10.0-1 [483 kB] Fetched 483 kB in 0s (35.1 MB/s) dpkg-name: info: moved 'libnetcdf22_1%3a4.10.0-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpm39dvu65/libnetcdf22_4.10.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-pkg-resources all 78.1.1-0.1 [224 kB] Fetched 224 kB in 0s (15.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5u_1pq8c/python3-pkg-resources_78.1.1-0.1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 uuid-dev arm64 2.42-1 [44.0 kB] Fetched 44.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2ir2yj1t/uuid-dev_2.42-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 tzdata all 2026a-3 [260 kB] Fetched 260 kB in 0s (13.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqv0ws52h/tzdata_2026a-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpam0g arm64 1.7.0-5+b1 [68.7 kB] Fetched 68.7 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbdws8as3/libpam0g_1.7.0-5+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb-shm0 arm64 1.17.0-2+b2 [105 kB] Fetched 105 kB in 0s (5811 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp945029cu/libxcb-shm0_1.17.0-2+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libfile-stripnondeterminism-perl all 1.15.0-1 [19.9 kB] Fetched 19.9 kB in 0s (1252 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb50o81er/libfile-stripnondeterminism-perl_1.15.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 findutils arm64 4.10.0-3+b1 [695 kB] Fetched 695 kB in 0s (58.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp29v0440q/findutils_4.10.0-3+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libldap2 arm64 2.6.10+dfsg-1+b1 [179 kB] Fetched 179 kB in 0s (11.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0ag_vhe3/libldap2_2.6.10+dfsg-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libbrotli1 arm64 1.2.0-3 [295 kB] Fetched 295 kB in 0s (25.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzoy9l519/libbrotli1_1.2.0-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libstdc++6 arm64 16-20260322-1 [653 kB] Fetched 653 kB in 0s (27.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpg1m6pvb9/libstdc++6_16-20260322-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-setuptools all 78.1.1-0.1 [738 kB] Fetched 738 kB in 0s (28.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplzn8ud2f/python3-setuptools_78.1.1-0.1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 python3.14-minimal arm64 3.14.3-5 [2243 kB] Fetched 2243 kB in 0s (139 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr8c0q2ji/python3.14-minimal_3.14.3-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libncursesw6 arm64 6.6+20251231-1 [125 kB] Fetched 125 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohe6rw_u/libncursesw6_6.6+20251231-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpotrace0 arm64 1.16-2+b3 [23.3 kB] Fetched 23.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptdvlk67x/libpotrace0_1.16-2+b3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 freeglut3-dev arm64 3.4.0-6+b1 [53.9 kB] Fetched 53.9 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3b2ugzqh/freeglut3-dev_3.4.0-6+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgnutls-dane0t64 arm64 3.8.12-3 [473 kB] Fetched 473 kB in 0s (45.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppcl8hw73/libgnutls-dane0t64_3.8.12-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libtool all 2.5.4-10 [539 kB] Fetched 539 kB in 0s (32.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn6gu17yj/libtool_2.5.4-10_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 netbase all 6.5 [12.4 kB] Fetched 12.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnem8yv3o/netbase_6.5_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 mawk arm64 1.3.4.20260302-1 [134 kB] Fetched 134 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphuv6pm6z/mawk_1.3.4.20260302-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libcups2t64 arm64 2.4.16-1 [235 kB] Fetched 235 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7z6iibed/libcups2t64_2.4.16-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libice6 arm64 2:1.1.1-1+b1 [63.2 kB] Fetched 63.2 kB in 0s (0 B/s) dpkg-name: info: moved 'libice6_2%3a1.1.1-1+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmpw3reh6rs/libice6_1.1.1-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 xkb-data all 2.47-1 [835 kB] Fetched 835 kB in 0s (77.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz9sp9v_v/xkb-data_2.47-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 libsmartcols1 arm64 2.42-1 [137 kB] Fetched 137 kB in 0s (8903 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3thhyg4u/libsmartcols1_2.42-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 build-essential arm64 12.12 [4624 B] Fetched 4624 B in 0s (408 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgw2_roum/build-essential_12.12_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 procps arm64 2:4.0.4-9+b1 [871 kB] Fetched 871 kB in 0s (75.6 MB/s) dpkg-name: info: moved 'procps_2%3a4.0.4-9+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmproxeycz8/procps_4.0.4-9+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 binutils-common arm64 2.46-3 [2632 kB] Fetched 2632 kB in 0s (162 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpeohmvxzp/binutils-common_2.46-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libunistring5 arm64 1.4.2-1 [455 kB] Fetched 455 kB in 0s (29.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp6bghcyy/libunistring5_1.4.2-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.2-3 [916 kB] Fetched 916 kB in 0s (53.2 MB/s) dpkg-name: info: moved 'zlib1g-dev_1%3a1.3.dfsg+really1.3.2-3_arm64.deb' to '/srv/rebuilderd/tmp/tmpcwwtlfpq/zlib1g-dev_1.3.dfsg+really1.3.2-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgcc-15-dev arm64 15.2.0-16 [2371 kB] Fetched 2371 kB in 0s (147 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphhqtjjm0/libgcc-15-dev_15.2.0-16_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libopengl-dev arm64 1.7.0-3 [5348 B] Fetched 5348 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppl5d56id/libopengl-dev_1.7.0-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpcre2-16-0 arm64 10.46-1+b1 [246 kB] Fetched 246 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_xz1qsct/libpcre2-16-0_10.46-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 cpp arm64 4:15.2.0-5 [1564 B] Fetched 1564 B in 0s (0 B/s) dpkg-name: info: moved 'cpp_4%3a15.2.0-5_arm64.deb' to '/srv/rebuilderd/tmp/tmpr3ukpzam/cpp_15.2.0-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 gettext arm64 0.23.2-2 [1609 kB] Fetched 1609 kB in 0s (33.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3zwkl_4o/gettext_0.23.2-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libmagic1t64 arm64 1:5.46-5+b1 [103 kB] Fetched 103 kB in 0s (0 B/s) dpkg-name: info: moved 'libmagic1t64_1%3a5.46-5+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmp9pt5wub3/libmagic1t64_5.46-5+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 texlive-base all 2025.20260124-1 [23.1 MB] Fetched 23.1 MB in 0s (53.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppbcj19ba/texlive-base_2025.20260124-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libmtdev1t64 arm64 1.1.7-1+b1 [22.9 kB] Fetched 22.9 kB in 0s (1442 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmv3c1afh/libmtdev1t64_1.1.7-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgudev-1.0-0 arm64 238-7+b1 [14.3 kB] Fetched 14.3 kB in 0s (1272 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3xw35ohh/libgudev-1.0-0_238-7+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 bzip2 arm64 1.0.8-6+b1 [39.7 kB] Fetched 39.7 kB in 0s (1786 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp46ydtn6/bzip2_1.0.8-6+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libaec0 arm64 1.1.6-1 [21.3 kB] Fetched 21.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpersx4v33/libaec0_1.1.6-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libjansson4 arm64 2.14-2+b4 [38.9 kB] Fetched 38.9 kB in 0s (351 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxb9j6qfc/libjansson4_2.14-2+b4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libcurl4t64 arm64 8.19.0-3 [368 kB] Fetched 368 kB in 0s (3090 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsklkl9px/libcurl4t64_8.19.0-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 g++-aarch64-linux-gnu arm64 4:15.2.0-5 [1196 B] Fetched 1196 B in 0s (24.6 kB/s) dpkg-name: info: moved 'g++-aarch64-linux-gnu_4%3a15.2.0-5_arm64.deb' to '/srv/rebuilderd/tmp/tmp6yea1lkl/g++-aarch64-linux-gnu_15.2.0-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libunbound8 arm64 1.24.2-1 [561 kB] Fetched 561 kB in 0s (11.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbcr79uh1/libunbound8_1.24.2-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-dev arm64 3.13.9-3 [26.0 kB] Fetched 26.0 kB in 0s (268 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsh7ha0ba/python3-dev_3.13.9-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Fetched 22.9 kB in 0s (354 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmtay8vgz/intltool-debian_0.35.0+20060710.6_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libfreetype6 arm64 2.14.3+dfsg-1 [457 kB] Fetched 457 kB in 0s (12.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2bdmedr1/libfreetype6_2.14.3+dfsg-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpsl-dev arm64 0.21.5-1 [80.6 kB] Fetched 80.6 kB in 0s (1091 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpegnzhvd2/libpsl-dev_0.21.5-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 base-files arm64 14 [72.9 kB] Fetched 72.9 kB in 0s (4378 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz_ve0syw/base-files_14_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-3+b1 [57.7 kB] Fetched 57.7 kB in 0s (3988 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpodnh686b/librtmp1_2.4+20151223.gitfa8646d.1-3+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 make arm64 4.4.1-3+b1 [454 kB] Fetched 454 kB in 0s (28.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp575ds36i/make_4.4.1-3+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libtext-wrapi18n-perl all 0.06-10 [8808 B] Fetched 8808 B in 0s (492 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp874ns5sd/libtext-wrapi18n-perl_0.06-10_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libctf-nobfd0 arm64 2.46-3 [155 kB] Fetched 155 kB in 0s (9757 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5iu6ld92/libctf-nobfd0_2.46-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 texlive-latex-base all 2025.20260124-1 [1340 kB] Fetched 1340 kB in 0s (67.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8h_sgchp/texlive-latex-base_2025.20260124-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-all arm64 3.13.9-3 [1048 B] Fetched 1048 B in 0s (58.4 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqweiu7xf/python3-all_3.13.9-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libkadm5srv-mit12 arm64 1.22.1-2 [53.7 kB] Fetched 53.7 kB in 0s (4644 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzv_ftyrg/libkadm5srv-mit12_1.22.1-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libasan8 arm64 16-20260322-1 [2673 kB] Fetched 2673 kB in 0s (124 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbdo_il57/libasan8_16-20260322-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libmd0 arm64 1.1.0-2+b2 [32.1 kB] Fetched 32.1 kB in 0s (2974 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6cot0nt_/libmd0_1.1.0-2+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libvulkan1 arm64 1.4.341.0-1 [140 kB] Fetched 140 kB in 0s (9188 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmj51qr80/libvulkan1_1.4.341.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libglu1-mesa arm64 9.0.2-1.1+b4 [162 kB] Fetched 162 kB in 0s (15.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkr4q7j1s/libglu1-mesa_9.0.2-1.1+b4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 hostname arm64 3.25+b1 [11.2 kB] Fetched 11.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpls96bkj8/hostname_3.25+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxdmcp6 arm64 1:1.1.5-2 [27.9 kB] Fetched 27.9 kB in 0s (0 B/s) dpkg-name: info: moved 'libxdmcp6_1%3a1.1.5-2_arm64.deb' to '/srv/rebuilderd/tmp/tmpmqwizwc1/libxdmcp6_1.1.5-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 cmake arm64 4.3.1-1 [13.8 MB] Fetched 13.8 MB in 0s (125 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcdz8xwq4/cmake_4.3.1-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxau6 arm64 1:1.0.11-1+b1 [20.8 kB] Fetched 20.8 kB in 0s (0 B/s) dpkg-name: info: moved 'libxau6_1%3a1.0.11-1+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmpgtx5n8v0/libxau6_1.0.11-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libjpeg62-turbo-dev arm64 1:2.1.5-4 [293 kB] Fetched 293 kB in 0s (27.2 MB/s) dpkg-name: info: moved 'libjpeg62-turbo-dev_1%3a2.1.5-4_arm64.deb' to '/srv/rebuilderd/tmp/tmpxeg1eadj/libjpeg62-turbo-dev_2.1.5-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgssrpc4t64 arm64 1.22.1-2 [56.5 kB] Fetched 56.5 kB in 0s (3786 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmze49q53/libgssrpc4t64_1.22.1-2_arm64.deb' Downloading dependency 129 of 426: libxcb-xinerama0:arm64=1.17.0-2+b2 Downloading dependency 130 of 426: libc-gconv-modules-extra:arm64=2.42-14 Downloading dependency 131 of 426: m4:arm64=1.4.21-1 Downloading dependency 132 of 426: libcurl3t64-gnutls:arm64=8.19.0-3 Downloading dependency 133 of 426: patch:arm64=2.8-2+b1 Downloading dependency 134 of 426: libproc2-0:arm64=2:4.0.4-9+b1 Downloading dependency 135 of 426: fonts-dejavu-core:arm64=2.37-8 Downloading dependency 136 of 426: python3.13:arm64=3.13.12-1 Downloading dependency 137 of 426: libpkgconf7:arm64=2.5.1-4 Downloading dependency 138 of 426: libexpat1-dev:arm64=2.7.5-1 Downloading dependency 139 of 426: libxrender1:arm64=1:0.9.12-1+b1 Downloading dependency 140 of 426: libgl1-mesa-dri:arm64=26.0.4-1 Downloading dependency 141 of 426: libfontconfig1:arm64=2.17.1-5 Downloading dependency 142 of 426: libjpeg62-turbo:arm64=1:2.1.5-4 Downloading dependency 143 of 426: libsensors5:arm64=1:3.6.2-2+b1 Downloading dependency 144 of 426: libxcb-glx0:arm64=1.17.0-2+b2 Downloading dependency 145 of 426: libglew-dev:arm64=2.3.1-3 Downloading dependency 146 of 426: dpkg-dev:arm64=1.23.7 Downloading dependency 147 of 426: libc-dev-bin:arm64=2.42-14 Downloading dependency 148 of 426: libxcb1-dev:arm64=1.17.0-2+b2 Downloading dependency 149 of 426: libgdbm-compat4t64:arm64=1.26-1+b1 Downloading dependency 150 of 426: libzstd-dev:arm64=1.5.7+dfsg-3+b1 Downloading dependency 151 of 426: python3-opengl:arm64=3.1.10+dfsg-1 Downloading dependency 152 of 426: libpython3.13:arm64=3.13.12-1 Downloading dependency 153 of 426: libqt5printsupport5t64:arm64=5.15.17+dfsg-7+b1 Downloading dependency 154 of 426: dh-python:arm64=7.20260309 Downloading dependency 155 of 426: libptexenc1:arm64=2025.20250727.75242+ds-5+b2 Downloading dependency 156 of 426: libgfortran5:arm64=16-20260322-1 Downloading dependency 157 of 426: mesa-libgallium:arm64=26.0.4-1 Downloading dependency 158 of 426: libsynctex2:arm64=2025.20250727.75242+ds-5+b2 Downloading dependency 159 of 426: libxau-dev:arm64=1:1.0.11-1+b1 Downloading dependency 160 of 426: libglx-dev:arm64=1.7.0-3 Downloading dependency 161 of 426: libxcb-shape0:arm64=1.17.0-2+b2 Downloading dependency 162 of 426: libglew2.3:arm64=2.3.1-3 Downloading dependency 163 of 426: linux-libc-dev:arm64=6.19.10-1 Downloading dependency 164 of 426: debianutils:arm64=5.23.2+b1 Downloading dependency 165 of 426: libmount1:arm64=2.42-1 Downloading dependency 166 of 426: libkdb5-10t64:arm64=1.22.1-2 Downloading dependency 167 of 426: debhelper:arm64=13.31 Downloading dependency 168 of 426: comerr-dev:arm64=2.1-1.47.4-1 Downloading dependency 169 of 426: libglut3.12:arm64=3.4.0-6+b1 Downloading dependency 170 of 426: libinput10:arm64=1.31.0-1 Downloading dependency 171 of 426: libwacom-common:arm64=2.18.0-1 Downloading dependency 172 of 426: libqt5network5t64:arm64=5.15.17+dfsg-7+b1 Downloading dependency 173 of 426: fonts-dejavu-mono:arm64=2.37-8 Downloading dependency 174 of 426: libpython3.14-stdlib:arm64=3.14.3-5 Downloading dependency 175 of 426: libqt5help5:arm64=5.15.17-4+b1 Downloading dependency 176 of 426: libattr1:arm64=1:2.5.2-4 Downloading dependency 177 of 426: gcc-aarch64-linux-gnu:arm64=4:15.2.0-5 Downloading dependency 178 of 426: g++-15:arm64=15.2.0-16 Downloading dependency 179 of 426: cpp-15-aarch64-linux-gnu:arm64=15.2.0-16 Downloading dependency 180 of 426: xtrans-dev:arm64=1.6.0-1 Downloading dependency 181 of 426: libxcb-dri3-0:arm64=1.17.0-2+b2 Downloading dependency 182 of 426: libaudit1:arm64=1:4.1.2-1+b1 Downloading dependency 183 of 426: xz-utils:arm64=5.8.2-2 Downloading dependency 184 of 426: xdg-utils:arm64=1.2.1-2 Downloading dependency 185 of 426: tex-common:arm64=6.20 Downloading dependency 186 of 426: shared-mime-info:arm64=2.4-5+b4 Downloading dependency 187 of 426: libssl3t64:arm64=3.6.1-3 Downloading dependency 188 of 426: gcc-15-aarch64-linux-gnu:arm64=15.2.0-16 Downloading dependency 189 of 426: libnetcdf22:arm64=1:4.10.0-1 Downloading dependency 190 of 426: python3-pkg-resources:arm64=78.1.1-0.1 Downloading dependency 191 of 426: uuid-dev:arm64=2.42-1 Downloading dependency 192 of 426: tzdata:arm64=2026a-3 Downloading dependency 193 of 426: libpam0g:arm64=1.7.0-5+b1 Downloading dependency 194 of 426: libxcb-shm0:arm64=1.17.0-2+b2 Downloading dependency 195 of 426: libfile-stripnondeterminism-perl:arm64=1.15.0-1 Downloading dependency 196 of 426: findutils:arm64=4.10.0-3+b1 Downloading dependency 197 of 426: libldap2:arm64=2.6.10+dfsg-1+b1 Downloading dependency 198 of 426: libbrotli1:arm64=1.2.0-3 Downloading dependency 199 of 426: libstdc++6:arm64=16-20260322-1 Downloading dependency 200 of 426: python3-setuptools:arm64=78.1.1-0.1 Downloading dependency 201 of 426: python3.14-minimal:arm64=3.14.3-5 Downloading dependency 202 of 426: libncursesw6:arm64=6.6+20251231-1 Downloading dependency 203 of 426: libpotrace0:arm64=1.16-2+b3 Downloading dependency 204 of 426: freeglut3-dev:arm64=3.4.0-6+b1 Downloading dependency 205 of 426: libgnutls-dane0t64:arm64=3.8.12-3 Downloading dependency 206 of 426: libtool:arm64=2.5.4-10 Downloading dependency 207 of 426: netbase:arm64=6.5 Downloading dependency 208 of 426: mawk:arm64=1.3.4.20260302-1 Downloading dependency 209 of 426: libcups2t64:arm64=2.4.16-1 Downloading dependency 210 of 426: libice6:arm64=2:1.1.1-1+b1 Downloading dependency 211 of 426: xkb-data:arm64=2.47-1 Downloading dependency 212 of 426: libsmartcols1:arm64=2.42-1 Downloading dependency 213 of 426: build-essential:arm64=12.12 Downloading dependency 214 of 426: procps:arm64=2:4.0.4-9+b1 Downloading dependency 215 of 426: binutils-common:arm64=2.46-3 Downloading dependency 216 of 426: libunistring5:arm64=1.4.2-1 Downloading dependency 217 of 426: zlib1g-dev:arm64=1:1.3.dfsg+really1.3.2-3 Downloading dependency 218 of 426: libgcc-15-dev:arm64=15.2.0-16 Downloading dependency 219 of 426: libopengl-dev:arm64=1.7.0-3 Downloading dependency 220 of 426: libpcre2-16-0:arm64=10.46-1+b1 Downloading dependency 221 of 426: cpp:arm64=4:15.2.0-5 Downloading dependency 222 of 426: gettext:arm64=0.23.2-2 Downloading dependency 223 of 426: libmagic1t64:arm64=1:5.46-5+b1 Downloading dependency 224 of 426: texlive-base:arm64=2025.20260124-1 Downloading dependency 225 of 426: libmtdev1t64:arm64=1.1.7-1+b1 Downloading dependency 226 of 426: libgudev-1.0-0:arm64=238-7+b1 Downloading dependency 227 of 426: bzip2:arm64=1.0.8-6+b1 Downloading dependency 228 of 426: libaec0:arm64=1.1.6-1 Downloading dependency 229 of 426: libjansson4:arm64=2.14-2+b4 Downloading dependency 230 of 426: libcurl4t64:arm64=8.19.0-3 Downloading dependency 231 of 426: g++-aarch64-linux-gnu:arm64=4:15.2.0-5 Downloading dependency 232 of 426: libunbound8:arm64=1.24.2-1 Downloading dependency 233 of 426: python3-dev:arm64=3.13.9-3 Downloading dependency 234 of 426: intltool-debian:arm64=0.35.0+20060710.6 Downloading dependency 235 of 426: libfreetype6:arm64=2.14.3+dfsg-1 Downloading dependency 236 of 426: libpsl-dev:arm64=0.21.5-1 Downloading dependency 237 of 426: base-files:arm64=14 Downloading dependency 238 of 426: librtmp1:arm64=2.4+20151223.gitfa8646d.1-3+b1 Downloading dependency 239 of 426: make:arm64=4.4.1-3+b1 Downloading dependency 240 of 426: libtext-wrapi18n-perl:arm64=0.06-10 Downloading dependency 241 of 426: libctf-nobfd0:arm64=2.46-3 Downloading dependency 242 of 426: texlive-latex-base:arm64=2025.20260124-1 Downloading dependency 243 of 426: python3-all:arm64=3.13.9-3 Downloading dependency 244 of 426: libkadm5srv-mit12:arm64=1.22.1-2 Downloading dependency 245 of 426: libasan8:arm64=16-20260322-1 Downloading dependency 246 of 426: libmd0:arm64=1.1.0-2+b2 Downloading dependency 247 of 426: libvulkan1:arm64=1.4.341.0-1 Downloading dependency 248 of 426: libglu1-mesa:arm64=9.0.2-1.1+b4 Downloading dependency 249 of 426: hostname:arm64=3.25+b1 Downloading dependency 250 of 426: libxdmcp6:arm64=1:1.1.5-2 Downloading dependency 251 of 426: cmake:arm64=4.3.1-1 Downloading dependency 252 of 426: libxau6:arm64=1:1.0.11-1+b1 Downloading dependency 253 of 426: libjpeg62-turbo-dev:arm64=1:2.1.5-4 Downloading dependency 254 of 426: libgssrpc4t64:arm64=1.22.1-2 Downloading dependency 255 of 426: python3-numpy:arm64=1:2.3.5+ds-3Get:1 http://deb.debian.org/debian unstable/main arm64 python3-numpy arm64 1:2.3.5+ds-3 [4184 kB] Fetched 4184 kB in 0s (31.7 MB/s) dpkg-name: info: moved 'python3-numpy_1%3a2.3.5+ds-3_arm64.deb' to '/srv/rebuilderd/tmp/tmp1oweguna/python3-numpy_2.3.5+ds-3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 libsasl2-2 arm64 2.1.28+dfsg1-10 [55.0 kB] Fetched 55.0 kB in 0s (5168 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4eabzg_i/libsasl2-2_2.1.28+dfsg1-10_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libatomic1 arm64 16-20260322-1 [9832 B] Fetched 9832 B in 0s (199 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkq_1313v/libatomic1_16-20260322-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libhogweed6t64 arm64 3.10.2-1 [332 kB] Fetched 332 kB in 0s (8140 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppodpluwr/libhogweed6t64_3.10.2-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg1-10 [19.8 kB] Fetched 19.8 kB in 0s (314 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmyblpdwy/libsasl2-modules-db_2.1.28+dfsg1-10_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxext-dev arm64 2:1.3.4-1+b4 [104 kB] Fetched 104 kB in 0s (8676 kB/s) dpkg-name: info: moved 'libxext-dev_2%3a1.3.4-1+b4_arm64.deb' to '/srv/rebuilderd/tmp/tmpu4t4_8h3/libxext-dev_1.3.4-1+b4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 fonts-lmodern all 2.005-1 [4540 kB] Fetched 4540 kB in 0s (136 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpos0m3rzy/fonts-lmodern_2.005-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 hdf5-helpers arm64 1.14.6+repack-2 [22.1 kB] Fetched 22.1 kB in 0s (1627 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0xriaytf/hdf5-helpers_1.14.6+repack-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpam-modules arm64 1.7.0-5+b1 [172 kB] Fetched 172 kB in 0s (15.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpf9rsk7ha/libpam-modules_1.7.0-5+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpython3-stdlib arm64 3.13.9-3 [10.5 kB] Fetched 10.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprl1dc2fs/libpython3-stdlib_3.13.9-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libtext-charwidth-perl arm64 0.04-11+b5 [9644 B] Fetched 9644 B in 0s (479 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmedgm7or/libtext-charwidth-perl_0.04-11+b5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxml2-16 arm64 2.15.2+dfsg-0.1 [592 kB] Fetched 592 kB in 0s (36.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpk19ohhmu/libxml2-16_2.15.2+dfsg-0.1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libhdf5-310 arm64 1.14.6+repack-2 [1121 kB] Fetched 1121 kB in 0s (40.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfmwsbvvy/libhdf5-310_1.14.6+repack-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libavahi-client3 arm64 0.8-18 [47.1 kB] Fetched 47.1 kB in 0s (3171 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_x4v37_1/libavahi-client3_0.8-18_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgmp-dev arm64 2:6.3.0+dfsg-5+b1 [633 kB] Fetched 633 kB in 0s (36.4 MB/s) dpkg-name: info: moved 'libgmp-dev_2%3a6.3.0+dfsg-5+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmpi7r4pzty/libgmp-dev_6.3.0+dfsg-5+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 file arm64 1:5.46-5+b1 [44.0 kB] Fetched 44.0 kB in 0s (2314 kB/s) dpkg-name: info: moved 'file_1%3a5.46-5+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmpqe73qu_w/file_5.46-5+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libice-dev arm64 2:1.1.1-1+b1 [73.6 kB] Fetched 73.6 kB in 0s (1424 kB/s) dpkg-name: info: moved 'libice-dev_2%3a1.1.1-1+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmpa1kfnd9s/libice-dev_1.1.1-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 x11proto-dev all 2025.1-1 [605 kB] Fetched 605 kB in 0s (4402 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwn34lbxp/x11proto-dev_2025.1-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpng16-16t64 arm64 1.6.56-1 [276 kB] Fetched 276 kB in 0s (17.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpluaah8uv/libpng16-16t64_1.6.56-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxt6t64 arm64 1:1.2.1-1.3+b1 [173 kB] Fetched 173 kB in 0s (8386 kB/s) dpkg-name: info: moved 'libxt6t64_1%3a1.2.1-1.3+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmpm4ruw09i/libxt6t64_1.2.1-1.3+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libopengl0 arm64 1.7.0-3 [32.0 kB] Fetched 32.0 kB in 0s (1683 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp28ihburn/libopengl0_1.7.0-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 po-debconf all 1.0.22 [216 kB] Fetched 216 kB in 0s (13.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprsgrdcs5/po-debconf_1.0.22_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 gettext-base arm64 0.23.2-2 [240 kB] Fetched 240 kB in 0s (15.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppp3y2uow/gettext-base_0.23.2-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libaudit-common all 1:4.1.2-1 [14.3 kB] Fetched 14.3 kB in 0s (702 kB/s) dpkg-name: info: moved 'libaudit-common_1%3a4.1.2-1_all.deb' to '/srv/rebuilderd/tmp/tmph_gelx9w/libaudit-common_4.1.2-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 groff-base arm64 1.23.0-10+b1 [1133 kB] Fetched 1133 kB in 0s (53.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcgmjm718/groff-base_1.23.0-10+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libuchardet0 arm64 0.0.8-2+b1 [69.1 kB] Fetched 69.1 kB in 0s (3247 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm2am5qcm/libuchardet0_0.0.8-2+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 dh-autoreconf all 22 [12.2 kB] Fetched 12.2 kB in 0s (712 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn5xz_yjp/dh-autoreconf_22_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 dh-strip-nondeterminism all 1.15.0-1 [8812 B] Fetched 8812 B in 0s (524 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprm9cylhw/dh-strip-nondeterminism_1.15.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libbinutils arm64 2.46-3 [687 kB] Fetched 687 kB in 0s (28.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9khjhu5n/libbinutils_2.46-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 man-db arm64 2.13.1-1+b1 [1455 kB] Fetched 1455 kB in 0s (41.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx2bqcqpd/man-db_2.13.1-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libreadline8t64 arm64 8.3-4 [168 kB] Fetched 168 kB in 0s (10.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_r5iw_ol/libreadline8t64_8.3-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgdbm6t64 arm64 1.26-1+b1 [77.1 kB] Fetched 77.1 kB in 0s (4501 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpezwrl31u/libgdbm6t64_1.26-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libidn2-dev arm64 2.3.8-4+b1 [102 kB] Fetched 102 kB in 0s (5931 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp568vdml7/libidn2-dev_2.3.8-4+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libmagic-mgc arm64 1:5.46-5+b1 [338 kB] Fetched 338 kB in 0s (17.1 MB/s) dpkg-name: info: moved 'libmagic-mgc_1%3a5.46-5+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmp99s6vk8o/libmagic-mgc_5.46-5+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libngtcp2-crypto-ossl-dev arm64 1.21.0-1 [26.1 kB] Fetched 26.1 kB in 0s (1543 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1gw2vy6u/libngtcp2-crypto-ossl-dev_1.21.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 g++-15-aarch64-linux-gnu arm64 15.2.0-16 [11.1 MB] Fetched 11.1 MB in 0s (124 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp005_b3nm/g++-15-aarch64-linux-gnu_15.2.0-16_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libnghttp2-14 arm64 1.68.1-1 [68.1 kB] Fetched 68.1 kB in 0s (5145 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpflt9y2gu/libnghttp2-14_1.68.1-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 autopoint all 0.23.2-2 [770 kB] Fetched 770 kB in 0s (31.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9lp7zmlq/autopoint_0.23.2-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpipeline1 arm64 1.5.8-2 [40.3 kB] Fetched 40.3 kB in 0s (2607 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5cqlyko6/libpipeline1_1.5.8-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libngtcp2-dev arm64 1.21.0-1 [184 kB] Fetched 184 kB in 0s (12.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8h_fqw_7/libngtcp2-dev_1.21.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 sed arm64 4.9-2+b2 [326 kB] Fetched 326 kB in 0s (15.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpeikuf187/sed_4.9-2+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpython3.13-stdlib arm64 3.13.12-1 [1908 kB] Fetched 1908 kB in 0s (59.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8_eulp03/libpython3.13-stdlib_3.13.12-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 rpcsvc-proto arm64 1.4.3-1+b2 [60.1 kB] Fetched 60.1 kB in 0s (3022 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd5nwaioo/rpcsvc-proto_1.4.3-1+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libldap-dev arm64 2.6.10+dfsg-1+b1 [305 kB] Fetched 305 kB in 0s (15.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqcp96qce/libldap-dev_2.6.10+dfsg-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libexpat1 arm64 2.7.5-1 [100.0 kB] Fetched 100.0 kB in 0s (6437 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzne1p09_/libexpat1_2.7.5-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libngtcp2-16 arm64 1.21.0-1 [122 kB] Fetched 122 kB in 0s (8323 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpci394agc/libngtcp2-16_1.21.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb-xkb1 arm64 1.17.0-2+b2 [128 kB] Fetched 128 kB in 0s (6773 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9_x73mcr/libxcb-xkb1_1.17.0-2+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 coreutils arm64 9.10-1 [3049 kB] Fetched 3049 kB in 0s (75.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp58ga9bvm/coreutils_9.10-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpython3-dev arm64 3.13.9-3 [10.8 kB] Fetched 10.8 kB in 0s (736 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkziyuu2o/libpython3-dev_3.13.9-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 ucf all 3.0053 [41.9 kB] Fetched 41.9 kB in 0s (2733 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsxxdosr2/ucf_3.0053_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpaper-utils arm64 2.2.5-0.3+b3 [16.3 kB] Fetched 16.3 kB in 0s (979 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphne7ocl4/libpaper-utils_2.2.5-0.3+b3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 t1utils arm64 1.41-4+b2 [57.5 kB] Fetched 57.5 kB in 0s (3437 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp84qizi42/t1utils_1.41-4+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libbrotli-dev arm64 1.2.0-3 [311 kB] Fetched 311 kB in 0s (7662 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8mgw3yaj/libbrotli-dev_1.2.0-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-more-itertools all 10.8.0-1 [71.7 kB] Fetched 71.7 kB in 0s (4336 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5290xnum/python3-more-itertools_10.8.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libdbus-1-3 arm64 1.16.2-4 [170 kB] Fetched 170 kB in 0s (8889 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpk3w1cc8j/libdbus-1-3_1.16.2-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libsz2 arm64 1.1.6-1 [17.7 kB] Fetched 17.7 kB in 0s (1755 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo6cq4xbg/libsz2_1.1.6-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgnutls28-dev arm64 3.8.12-3 [1428 kB] Fetched 1428 kB in 0s (68.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx0tgljbw/libgnutls28-dev_3.8.12-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Fetched 12.0 kB in 0s (814 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp7tcprrd/python3-jaraco.functools_4.1.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 x11-common all 1:7.7+26 [217 kB] Fetched 217 kB in 0s (20.5 MB/s) dpkg-name: info: moved 'x11-common_1%3a7.7+26_all.deb' to '/srv/rebuilderd/tmp/tmpu2bu44hu/x11-common_7.7+26_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb-present0 arm64 1.17.0-2+b2 [106 kB] Fetched 106 kB in 0s (5984 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp29wmf2wl/libxcb-present0_1.17.0-2+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgmp10 arm64 2:6.3.0+dfsg-5+b1 [544 kB] Fetched 544 kB in 0s (26.3 MB/s) dpkg-name: info: moved 'libgmp10_2%3a6.3.0+dfsg-5+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmpf4cprnus/libgmp10_6.3.0+dfsg-5+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libglib2.0-0t64 arm64 2.88.0-1 [1426 kB] Fetched 1426 kB in 0s (46.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqc4b4wka/libglib2.0-0t64_2.88.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb-xinput0 arm64 1.17.0-2+b2 [129 kB] Fetched 129 kB in 0s (8121 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmyw6fcic/libxcb-xinput0_1.17.0-2+b2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 liblzma-dev arm64 5.8.2-2 [361 kB] Fetched 361 kB in 0s (18.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4i_goe6p/liblzma-dev_5.8.2-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libc6 arm64 2.42-14 [1386 kB] Fetched 1386 kB in 0s (28.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplsq3j4ej/libc6_2.42-14_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libhdf5-dev arm64 1.14.6+repack-2 [3143 kB] Fetched 3143 kB in 0s (22.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxb2ipnco/libhdf5-dev_1.14.6+repack-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 ncurses-bin arm64 6.6+20251231-1 [438 kB] Fetched 438 kB in 0s (37.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjx7p6ejn/ncurses-bin_6.6+20251231-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libkrb5-dev arm64 1.22.1-2 [16.1 kB] Fetched 16.1 kB in 0s (1155 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy5xvc4hl/libkrb5-dev_1.22.1-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxshmfence1 arm64 1.3.3-1+b1 [11.4 kB] Fetched 11.4 kB in 0s (647 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptdmymzx2/libxshmfence1_1.3.3-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 autotools-dev all 20240727.1 [60.2 kB] Fetched 60.2 kB in 0s (3379 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzist59ia/autotools-dev_20240727.1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libdrm-common all 2.4.131-1 [9168 B] Fetched 9168 B in 0s (572 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt2j8o17q/libdrm-common_2.4.131-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libssh2-1t64 arm64 1.11.1-2 [234 kB] Fetched 234 kB in 0s (15.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4r8tupd1/libssh2-1t64_1.11.1-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb1 arm64 1.17.0-2+b2 [142 kB] Fetched 142 kB in 0s (9027 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt5ywy0tg/libxcb1_1.17.0-2+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 openssl-provider-legacy arm64 3.6.1-3 [311 kB] Fetched 311 kB in 0s (16.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp60ztei0f/openssl-provider-legacy_3.6.1-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 base-passwd arm64 3.6.8+b1 [54.3 kB] Fetched 54.3 kB in 0s (3306 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmparjhrfqq/base-passwd_3.6.8+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 libpython3.14-dev arm64 3.14.3-5 [5231 kB] Fetched 5231 kB in 0s (90.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpml_ha701/libpython3.14-dev_3.14.3-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libctf0 arm64 2.46-3 [86.0 kB] Fetched 86.0 kB in 0s (5077 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsuvrqm0b/libctf0_2.46-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libkeyutils1 arm64 1.6.3-6+b1 [9852 B] Fetched 9852 B in 0s (615 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt21mca6u/libkeyutils1_1.6.3-6+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 util-linux arm64 2.42-1 [1177 kB] Fetched 1177 kB in 0s (62.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbmy0mjpq/util-linux_2.42-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libtexlua53-5 arm64 2025.20250727.75242+ds-5+b2 [104 kB] Fetched 104 kB in 0s (5317 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc0c29tkw/libtexlua53-5_2025.20250727.75242+ds-5+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libjpeg-dev arm64 1:2.1.5-4 [72.2 kB] Fetched 72.2 kB in 0s (4691 kB/s) dpkg-name: info: moved 'libjpeg-dev_1%3a2.1.5-4_arm64.deb' to '/srv/rebuilderd/tmp/tmpb628wq25/libjpeg-dev_2.1.5-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxt-dev arm64 1:1.2.1-1.3+b1 [403 kB] Fetched 403 kB in 0s (24.6 MB/s) dpkg-name: info: moved 'libxt-dev_1%3a1.2.1-1.3+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmp9mte1pfr/libxt-dev_1.2.1-1.3+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libbz2-1.0 arm64 1.0.8-6+b1 [37.1 kB] Fetched 37.1 kB in 0s (3023 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbpqy6vq_/libbz2-1.0_1.0.8-6+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libegl-mesa0 arm64 26.0.4-1 [116 kB] Fetched 116 kB in 0s (6627 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzka2twtp/libegl-mesa0_26.0.4-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libmd4c0 arm64 0.5.2-2+b2 [46.0 kB] Fetched 46.0 kB in 0s (4375 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpenp85d4i/libmd4c0_0.5.2-2+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgbm1 arm64 26.0.4-1 [46.2 kB] Fetched 46.2 kB in 0s (2459 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpumq8i61v/libgbm1_26.0.4-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libwayland-client0 arm64 1.24.0-2+b2 [27.3 kB] Fetched 27.3 kB in 0s (2518 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphej9jw59/libwayland-client0_1.24.0-2+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 binutils arm64 2.46-3 [279 kB] Fetched 279 kB in 0s (17.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkz03c51u/binutils_2.46-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libharfbuzz0b arm64 12.3.2-2+b2 [471 kB] Fetched 471 kB in 0s (28.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvcujc0wn/libharfbuzz0b_12.3.2-2+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 automake all 1:1.18.1-4 [877 kB] Fetched 877 kB in 0s (48.3 MB/s) dpkg-name: info: moved 'automake_1%3a1.18.1-4_all.deb' to '/srv/rebuilderd/tmp/tmp41aqpklu/automake_1.18.1-4_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 dwz arm64 0.16-4 [99.2 kB] Fetched 99.2 kB in 0s (5154 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl0oqc3zo/dwz_0.16-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxi6 arm64 2:1.8.2-2 [77.5 kB] Fetched 77.5 kB in 0s (4122 kB/s) dpkg-name: info: moved 'libxi6_2%3a1.8.2-2_arm64.deb' to '/srv/rebuilderd/tmp/tmpjflzlgvm/libxi6_1.8.2-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libngtcp2-crypto-gnutls8 arm64 1.21.0-1 [22.2 kB] Fetched 22.2 kB in 0s (1214 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1q5by7s7/libngtcp2-crypto-gnutls8_1.21.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libp11-kit-dev arm64 0.26.2-2 [223 kB] Fetched 223 kB in 0s (17.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6n_rn1yr/libp11-kit-dev_0.26.2-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libsframe3 arm64 2.46-3 [85.0 kB] Fetched 85.0 kB in 0s (4908 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpg2yki_ho/libsframe3_2.46-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libhdf5-hl-fortran-310 arm64 1.14.6+repack-2 [37.4 kB] Fetched 37.4 kB in 0s (2527 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbl5t8q_u/libhdf5-hl-fortran-310_1.14.6+repack-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libsystemd0 arm64 260.1-1 [406 kB] Fetched 406 kB in 0s (32.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcgfz4bjm/libsystemd0_260.1-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgraphite2-3 arm64 1.3.14-13 [69.2 kB] Fetched 69.2 kB in 0s (6691 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb_ldb9qz/libgraphite2-3_1.3.14-13_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libevent-2.1-7t64 arm64 2.1.12-stable-10+b2 [170 kB] Fetched 170 kB in 0s (15.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx0cy5y8z/libevent-2.1-7t64_2.1.12-stable-10+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 media-types all 14.0.0 [30.8 kB] Fetched 30.8 kB in 0s (2074 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv50uu894/media-types_14.0.0_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgl-dev arm64 1.7.0-3 [101 kB] Fetched 101 kB in 0s (9541 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6gfx4uc9/libgl-dev_1.7.0-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libitm1 arm64 16-20260322-1 [24.2 kB] Fetched 24.2 kB in 0s (1634 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7j_3xy8c/libitm1_16-20260322-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libcrypt1 arm64 1:4.5.1-1 [93.9 kB] Fetched 93.9 kB in 0s (6108 kB/s) dpkg-name: info: moved 'libcrypt1_1%3a4.5.1-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpnt_k_wxt/libcrypt1_4.5.1-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxext6 arm64 2:1.3.4-1+b4 [49.0 kB] Fetched 49.0 kB in 0s (2692 kB/s) dpkg-name: info: moved 'libxext6_2%3a1.3.4-1+b4_arm64.deb' to '/srv/rebuilderd/tmp/tmpzt301p_y/libxext6_1.3.4-1+b4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libcc1-0 arm64 16-20260322-1 [38.8 kB] Fetched 38.8 kB in 0s (2247 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplsrcfdq6/libcc1-0_16-20260322-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3.13-minimal arm64 3.13.12-1 [2070 kB] Fetched 2070 kB in 0s (99.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfvodah2s/python3.13-minimal_3.13.12-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpcre2-8-0 arm64 10.46-1+b1 [260 kB] Fetched 260 kB in 0s (15.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpupig6yjf/libpcre2-8-0_10.46-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libglu1-mesa-dev arm64 9.0.2-1.1+b4 [203 kB] Fetched 203 kB in 0s (10.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2ag8s1l_/libglu1-mesa-dev_9.0.2-1.1+b4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libssl-dev arm64 3.6.1-3 [3412 kB] Fetched 3412 kB in 0s (136 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppejbpphk/libssl-dev_3.6.1-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 debconf all 1.5.92 [123 kB] Fetched 123 kB in 0s (6845 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9c694tgu/debconf_1.5.92_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libdb5.3t64 arm64 5.3.28+dfsg2-11 [626 kB] Fetched 626 kB in 0s (39.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3b5ereve/libdb5.3t64_5.3.28+dfsg2-11_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libcurl4-openssl-dev arm64 8.19.0-3 [506 kB] Fetched 506 kB in 0s (23.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnvnz_177/libcurl4-openssl-dev_8.19.0-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libavahi-common-data arm64 0.8-18 [113 kB] Fetched 113 kB in 0s (6374 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplt0pbg5i/libavahi-common-data_0.8-18_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libjs-sphinxdoc all 8.2.3-12 [27.9 kB] Fetched 27.9 kB in 0s (1913 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprh8is1tj/libjs-sphinxdoc_8.2.3-12_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libmpfi0 arm64 1.5.4+ds-5 [34.7 kB] Fetched 34.7 kB in 0s (2158 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnl_xugsl/libmpfi0_1.5.4+ds-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 grep arm64 3.12-1+b1 [440 kB] Fetched 440 kB in 0s (21.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpph8f_xfb/grep_3.12-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libdpkg-perl all 1.23.7 [669 kB] Fetched 669 kB in 0s (46.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo72wtfum/libdpkg-perl_1.23.7_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpam-runtime all 1.7.0-5 [249 kB] Fetched 249 kB in 0s (10.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps572cju2/libpam-runtime_1.7.0-5_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libstdc++-15-dev arm64 15.2.0-16 [2650 kB] Fetched 2650 kB in 0s (140 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyetwe_ri/libstdc++-15-dev_15.2.0-16_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 autoconf all 2.72-6 [494 kB] Fetched 494 kB in 0s (29.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyq0wcrqn/autoconf_2.72-6_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libidn2-0 arm64 2.3.8-4+b1 [108 kB] Fetched 108 kB in 0s (7434 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvv1rwyaa/libidn2-0_2.3.8-4+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxmu6 arm64 2:1.1.3-4 [55.0 kB] Fetched 55.0 kB in 0s (2838 kB/s) dpkg-name: info: moved 'libxmu6_2%3a1.1.3-4_arm64.deb' to '/srv/rebuilderd/tmp/tmp0n_8gjqb/libxmu6_1.1.3-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libz3-4 arm64 4.13.3-1+b1 [7370 kB] Fetched 7370 kB in 0s (101 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5wm4zgjm/libz3-4_4.13.3-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 readline-common all 8.3-4 [74.8 kB] Fetched 74.8 kB in 0s (4323 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplzmxwdcb/readline-common_8.3-4_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 liblzma5 arm64 5.8.2-2 [320 kB] Fetched 320 kB in 0s (30.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_fgtix8q/liblzma5_5.8.2-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libteckit0 arm64 2.5.13+ds-1 [331 kB] Fetched 331 kB in 0s (13.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_24zwag0/libteckit0_2.5.13+ds-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libbz2-dev arm64 1.0.8-6+b1 [30.9 kB] Fetched 30.9 kB in 0s (1648 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6_x5tf8h/libbz2-dev_1.0.8-6+b1_arm64.deb' Downloading dependency 256 of 426: libsasl2-2:arm64=2.1.28+dfsg1-10 Downloading dependency 257 of 426: libatomic1:arm64=16-20260322-1 Downloading dependency 258 of 426: libhogweed6t64:arm64=3.10.2-1 Downloading dependency 259 of 426: libsasl2-modules-db:arm64=2.1.28+dfsg1-10 Downloading dependency 260 of 426: libxext-dev:arm64=2:1.3.4-1+b4 Downloading dependency 261 of 426: fonts-lmodern:arm64=2.005-1 Downloading dependency 262 of 426: hdf5-helpers:arm64=1.14.6+repack-2 Downloading dependency 263 of 426: libpam-modules:arm64=1.7.0-5+b1 Downloading dependency 264 of 426: libpython3-stdlib:arm64=3.13.9-3 Downloading dependency 265 of 426: libtext-charwidth-perl:arm64=0.04-11+b5 Downloading dependency 266 of 426: libxml2-16:arm64=2.15.2+dfsg-0.1 Downloading dependency 267 of 426: libhdf5-310:arm64=1.14.6+repack-2 Downloading dependency 268 of 426: libavahi-client3:arm64=0.8-18 Downloading dependency 269 of 426: libgmp-dev:arm64=2:6.3.0+dfsg-5+b1 Downloading dependency 270 of 426: file:arm64=1:5.46-5+b1 Downloading dependency 271 of 426: libice-dev:arm64=2:1.1.1-1+b1 Downloading dependency 272 of 426: x11proto-dev:arm64=2025.1-1 Downloading dependency 273 of 426: libpng16-16t64:arm64=1.6.56-1 Downloading dependency 274 of 426: libxt6t64:arm64=1:1.2.1-1.3+b1 Downloading dependency 275 of 426: libopengl0:arm64=1.7.0-3 Downloading dependency 276 of 426: po-debconf:arm64=1.0.22 Downloading dependency 277 of 426: gettext-base:arm64=0.23.2-2 Downloading dependency 278 of 426: libaudit-common:arm64=1:4.1.2-1 Downloading dependency 279 of 426: groff-base:arm64=1.23.0-10+b1 Downloading dependency 280 of 426: libuchardet0:arm64=0.0.8-2+b1 Downloading dependency 281 of 426: dh-autoreconf:arm64=22 Downloading dependency 282 of 426: dh-strip-nondeterminism:arm64=1.15.0-1 Downloading dependency 283 of 426: libbinutils:arm64=2.46-3 Downloading dependency 284 of 426: man-db:arm64=2.13.1-1+b1 Downloading dependency 285 of 426: libreadline8t64:arm64=8.3-4 Downloading dependency 286 of 426: libgdbm6t64:arm64=1.26-1+b1 Downloading dependency 287 of 426: libidn2-dev:arm64=2.3.8-4+b1 Downloading dependency 288 of 426: libmagic-mgc:arm64=1:5.46-5+b1 Downloading dependency 289 of 426: libngtcp2-crypto-ossl-dev:arm64=1.21.0-1 Downloading dependency 290 of 426: g++-15-aarch64-linux-gnu:arm64=15.2.0-16 Downloading dependency 291 of 426: libnghttp2-14:arm64=1.68.1-1 Downloading dependency 292 of 426: autopoint:arm64=0.23.2-2 Downloading dependency 293 of 426: libpipeline1:arm64=1.5.8-2 Downloading dependency 294 of 426: libngtcp2-dev:arm64=1.21.0-1 Downloading dependency 295 of 426: sed:arm64=4.9-2+b2 Downloading dependency 296 of 426: libpython3.13-stdlib:arm64=3.13.12-1 Downloading dependency 297 of 426: rpcsvc-proto:arm64=1.4.3-1+b2 Downloading dependency 298 of 426: libldap-dev:arm64=2.6.10+dfsg-1+b1 Downloading dependency 299 of 426: libexpat1:arm64=2.7.5-1 Downloading dependency 300 of 426: libngtcp2-16:arm64=1.21.0-1 Downloading dependency 301 of 426: libxcb-xkb1:arm64=1.17.0-2+b2 Downloading dependency 302 of 426: coreutils:arm64=9.10-1 Downloading dependency 303 of 426: libpython3-dev:arm64=3.13.9-3 Downloading dependency 304 of 426: ucf:arm64=3.0053 Downloading dependency 305 of 426: libpaper-utils:arm64=2.2.5-0.3+b3 Downloading dependency 306 of 426: t1utils:arm64=1.41-4+b2 Downloading dependency 307 of 426: libbrotli-dev:arm64=1.2.0-3 Downloading dependency 308 of 426: python3-more-itertools:arm64=10.8.0-1 Downloading dependency 309 of 426: libdbus-1-3:arm64=1.16.2-4 Downloading dependency 310 of 426: libsz2:arm64=1.1.6-1 Downloading dependency 311 of 426: libgnutls28-dev:arm64=3.8.12-3 Downloading dependency 312 of 426: python3-jaraco.functools:arm64=4.1.0-1 Downloading dependency 313 of 426: x11-common:arm64=1:7.7+26 Downloading dependency 314 of 426: libxcb-present0:arm64=1.17.0-2+b2 Downloading dependency 315 of 426: libgmp10:arm64=2:6.3.0+dfsg-5+b1 Downloading dependency 316 of 426: libglib2.0-0t64:arm64=2.88.0-1 Downloading dependency 317 of 426: libxcb-xinput0:arm64=1.17.0-2+b2 Downloading dependency 318 of 426: liblzma-dev:arm64=5.8.2-2 Downloading dependency 319 of 426: libc6:arm64=2.42-14 Downloading dependency 320 of 426: libhdf5-dev:arm64=1.14.6+repack-2 Downloading dependency 321 of 426: ncurses-bin:arm64=6.6+20251231-1 Downloading dependency 322 of 426: libkrb5-dev:arm64=1.22.1-2 Downloading dependency 323 of 426: libxshmfence1:arm64=1.3.3-1+b1 Downloading dependency 324 of 426: autotools-dev:arm64=20240727.1 Downloading dependency 325 of 426: libdrm-common:arm64=2.4.131-1 Downloading dependency 326 of 426: libssh2-1t64:arm64=1.11.1-2 Downloading dependency 327 of 426: libxcb1:arm64=1.17.0-2+b2 Downloading dependency 328 of 426: openssl-provider-legacy:arm64=3.6.1-3 Downloading dependency 329 of 426: base-passwd:arm64=3.6.8+b1 Downloading dependency 330 of 426: libpython3.14-dev:arm64=3.14.3-5 Downloading dependency 331 of 426: libctf0:arm64=2.46-3 Downloading dependency 332 of 426: libkeyutils1:arm64=1.6.3-6+b1 Downloading dependency 333 of 426: util-linux:arm64=2.42-1 Downloading dependency 334 of 426: libtexlua53-5:arm64=2025.20250727.75242+ds-5+b2 Downloading dependency 335 of 426: libjpeg-dev:arm64=1:2.1.5-4 Downloading dependency 336 of 426: libxt-dev:arm64=1:1.2.1-1.3+b1 Downloading dependency 337 of 426: libbz2-1.0:arm64=1.0.8-6+b1 Downloading dependency 338 of 426: libegl-mesa0:arm64=26.0.4-1 Downloading dependency 339 of 426: libmd4c0:arm64=0.5.2-2+b2 Downloading dependency 340 of 426: libgbm1:arm64=26.0.4-1 Downloading dependency 341 of 426: libwayland-client0:arm64=1.24.0-2+b2 Downloading dependency 342 of 426: binutils:arm64=2.46-3 Downloading dependency 343 of 426: libharfbuzz0b:arm64=12.3.2-2+b2 Downloading dependency 344 of 426: automake:arm64=1:1.18.1-4 Downloading dependency 345 of 426: dwz:arm64=0.16-4 Downloading dependency 346 of 426: libxi6:arm64=2:1.8.2-2 Downloading dependency 347 of 426: libngtcp2-crypto-gnutls8:arm64=1.21.0-1 Downloading dependency 348 of 426: libp11-kit-dev:arm64=0.26.2-2 Downloading dependency 349 of 426: libsframe3:arm64=2.46-3 Downloading dependency 350 of 426: libhdf5-hl-fortran-310:arm64=1.14.6+repack-2 Downloading dependency 351 of 426: libsystemd0:arm64=260.1-1 Downloading dependency 352 of 426: libgraphite2-3:arm64=1.3.14-13 Downloading dependency 353 of 426: libevent-2.1-7t64:arm64=2.1.12-stable-10+b2 Downloading dependency 354 of 426: media-types:arm64=14.0.0 Downloading dependency 355 of 426: libgl-dev:arm64=1.7.0-3 Downloading dependency 356 of 426: libitm1:arm64=16-20260322-1 Downloading dependency 357 of 426: libcrypt1:arm64=1:4.5.1-1 Downloading dependency 358 of 426: libxext6:arm64=2:1.3.4-1+b4 Downloading dependency 359 of 426: libcc1-0:arm64=16-20260322-1 Downloading dependency 360 of 426: python3.13-minimal:arm64=3.13.12-1 Downloading dependency 361 of 426: libpcre2-8-0:arm64=10.46-1+b1 Downloading dependency 362 of 426: libglu1-mesa-dev:arm64=9.0.2-1.1+b4 Downloading dependency 363 of 426: libssl-dev:arm64=3.6.1-3 Downloading dependency 364 of 426: debconf:arm64=1.5.92 Downloading dependency 365 of 426: libdb5.3t64:arm64=5.3.28+dfsg2-11 Downloading dependency 366 of 426: libcurl4-openssl-dev:arm64=8.19.0-3 Downloading dependency 367 of 426: libavahi-common-data:arm64=0.8-18 Downloading dependency 368 of 426: libjs-sphinxdoc:arm64=8.2.3-12 Downloading dependency 369 of 426: libmpfi0:arm64=1.5.4+ds-5 Downloading dependency 370 of 426: grep:arm64=3.12-1+b1 Downloading dependency 371 of 426: libdpkg-perl:arm64=1.23.7 Downloading dependency 372 of 426: libpam-runtime:arm64=1.7.0-5 Downloading dependency 373 of 426: libstdc++-15-dev:arm64=15.2.0-16 Downloading dependency 374 of 426: autoconf:arm64=2.72-6 Downloading dependency 375 of 426: libidn2-0:arm64=2.3.8-4+b1 Downloading dependency 376 of 426: libxmu6:arm64=2:1.1.3-4 Downloading dependency 377 of 426: libz3-4:arm64=4.13.3-1+b1 Downloading dependency 378 of 426: readline-common:arm64=8.3-4 Downloading dependency 379 of 426: liblzma5:arm64=5.8.2-2 Downloading dependency 380 of 426: libteckit0:arm64=2.5.13+ds-1 Downloading dependency 381 of 426: libbz2-dev:arm64=1.0.8-6+b1 Downloading dependency 382 of 426: python3-jaraco.context:arm64=6.0.1-2Get:1 http://deb.debian.org/debian unstable/main arm64 python3-jaraco.context all 6.0.1-2 [8184 B] Fetched 8184 B in 0s (432 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpk9smo87e/python3-jaraco.context_6.0.1-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb-xfixes0 arm64 1.17.0-2+b2 [109 kB] Fetched 109 kB in 0s (6472 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpeeildr8o/libxcb-xfixes0_1.17.0-2+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 perl arm64 5.40.1-7 [267 kB] Fetched 267 kB in 0s (17.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvjsxr5dz/perl_5.40.1-7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libisl23 arm64 0.27-2 [598 kB] Fetched 598 kB in 0s (47.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9shhx9z3/libisl23_0.27-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 gcc-16-base arm64 16-20260322-1 [35.6 kB] Fetched 35.6 kB in 0s (2056 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8mgbg9q9/gcc-16-base_16-20260322-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libqt5xml5t64 arm64 5.15.17+dfsg-7+b1 [113 kB] Fetched 113 kB in 0s (7107 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoh71q54i/libqt5xml5t64_5.15.17+dfsg-7+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libwacom9 arm64 2.18.0-1 [25.7 kB] Fetched 25.7 kB in 0s (2037 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpud5pg51a/libwacom9_2.18.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb-render0 arm64 1.17.0-2+b2 [115 kB] Fetched 115 kB in 0s (6093 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfnglj9fn/libxcb-render0_1.17.0-2+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libmpc3 arm64 1.3.1-3 [49.3 kB] Fetched 49.3 kB in 0s (2783 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7azl18jz/libmpc3_1.3.1-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgnutls30t64 arm64 3.8.12-3 [1409 kB] Fetched 1409 kB in 0s (47.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps9mhu39u/libgnutls30t64_3.8.12-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libarchive13t64 arm64 3.8.5-1 [329 kB] Fetched 329 kB in 0s (21.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_5glgklm/libarchive13t64_3.8.5-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 python3.14-dev arm64 3.14.3-5 [507 kB] Fetched 507 kB in 0s (4902 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnrmj1w04/python3.14-dev_3.14.3-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 zlib1g arm64 1:1.3.dfsg+really1.3.2-3 [87.9 kB] Fetched 87.9 kB in 0s (2096 kB/s) dpkg-name: info: moved 'zlib1g_1%3a1.3.dfsg+really1.3.2-3_arm64.deb' to '/srv/rebuilderd/tmp/tmp_ybn8xay/zlib1g_1.3.dfsg+really1.3.2-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-all-dev arm64 3.13.9-3 [1068 B] Fetched 1068 B in 0s (33.5 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgyhspgz_/python3-all-dev_3.13.9-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libdebhelper-perl all 13.31 [75.7 kB] Fetched 75.7 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx7ajyyad/libdebhelper-perl_13.31_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libk5crypto3 arm64 1.22.1-2 [77.1 kB] Fetched 77.1 kB in 0s (7586 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkcjuej_y/libk5crypto3_1.22.1-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-numpy-dev arm64 1:2.3.5+ds-3 [135 kB] Fetched 135 kB in 0s (7553 kB/s) dpkg-name: info: moved 'python3-numpy-dev_1%3a2.3.5+ds-3_arm64.deb' to '/srv/rebuilderd/tmp/tmpatp7gfwq/python3-numpy-dev_2.3.5+ds-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libhdf5-fortran-310 arm64 1.14.6+repack-2 [102 kB] Fetched 102 kB in 0s (6199 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3tgx3r14/libhdf5-fortran-310_1.14.6+repack-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxaw7 arm64 2:1.0.16-1+b1 [195 kB] Fetched 195 kB in 0s (18.4 MB/s) dpkg-name: info: moved 'libxaw7_2%3a1.0.16-1+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmp64_8hh3g/libxaw7_1.0.16-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libubsan1 arm64 16-20260322-1 [1080 kB] Fetched 1080 kB in 0s (60.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmmkzlf48/libubsan1_16-20260322-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 bsdextrautils arm64 2.42-1 [97.4 kB] Fetched 97.4 kB in 0s (9402 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkzzevme8/bsdextrautils_2.42-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-minimal arm64 3.13.9-3 [27.6 kB] Fetched 27.6 kB in 0s (1468 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4xe51k2y/python3-minimal_3.13.9-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libdebconfclient0 arm64 0.282+b2 [11.3 kB] Fetched 11.3 kB in 0s (731 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmy3oi2zu/libdebconfclient0_0.282+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxxf86vm1 arm64 1:1.1.4-2 [19.5 kB] Fetched 19.5 kB in 0s (1210 kB/s) dpkg-name: info: moved 'libxxf86vm1_1%3a1.1.4-2_arm64.deb' to '/srv/rebuilderd/tmp/tmps7xwvn85/libxxf86vm1_1.1.4-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 bash arm64 5.3-2 [1505 kB] Fetched 1505 kB in 0s (52.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpi9g_i5h2/bash_5.3-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libp11-kit0 arm64 0.26.2-2 [436 kB] Fetched 436 kB in 0s (17.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyw7jp2b4/libp11-kit0_0.26.2-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxxhash0 arm64 0.8.3-2+b1 [22.4 kB] Fetched 22.4 kB in 0s (1557 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxbr8hv86/libxxhash0_0.8.3-2+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libx11-dev arm64 2:1.8.13-1 [887 kB] Fetched 887 kB in 0s (38.5 MB/s) dpkg-name: info: moved 'libx11-dev_2%3a1.8.13-1_arm64.deb' to '/srv/rebuilderd/tmp/tmplbzdhxsn/libx11-dev_1.8.13-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 fontconfig-config arm64 2.17.1-5 [56.1 kB] Fetched 56.1 kB in 0s (3781 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpenml8ce9/fontconfig-config_2.17.1-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libqt5test5t64 arm64 5.15.17+dfsg-7+b1 [132 kB] Fetched 132 kB in 0s (12.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8dp5ctzu/libqt5test5t64_5.15.17+dfsg-7+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libevdev2 arm64 1.13.6+dfsg-1 [30.7 kB] Fetched 30.7 kB in 0s (1801 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyf13rbh_/libevdev2_1.13.6+dfsg-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpsl5t64 arm64 0.21.5-1 [59.7 kB] Fetched 59.7 kB in 0s (4651 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm9lbotga/libpsl5t64_0.21.5-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 xorg-sgml-doctools all 1:1.12.1-1 [23.9 kB] Fetched 23.9 kB in 0s (2004 kB/s) dpkg-name: info: moved 'xorg-sgml-doctools_1%3a1.12.1-1_all.deb' to '/srv/rebuilderd/tmp/tmpm01gkk5i/xorg-sgml-doctools_1.12.1-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 liblapack3 arm64 3.12.1-7+b1 [1815 kB] Fetched 1815 kB in 0s (105 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_q_d_229/liblapack3_3.12.1-7+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libqt5designer5 arm64 5.15.17-4+b1 [2713 kB] Fetched 2713 kB in 0s (92.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0r2kc187/libqt5designer5_5.15.17-4+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libcom-err2 arm64 1.47.4-1 [19.2 kB] Fetched 19.2 kB in 0s (904 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxtf1v38v/libcom-err2_1.47.4-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libqt5sql5t64 arm64 5.15.17+dfsg-7+b1 [114 kB] Fetched 114 kB in 0s (7917 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphr7l9rue/libqt5sql5t64_5.15.17+dfsg-7+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libllvm21 arm64 1:21.1.8-7 [25.4 MB] Fetched 25.4 MB in 0s (123 MB/s) dpkg-name: info: moved 'libllvm21_1%3a21.1.8-7_arm64.deb' to '/srv/rebuilderd/tmp/tmppcm5rdkm/libllvm21_21.1.8-7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxdmcp-dev arm64 1:1.1.5-2 [43.5 kB] Fetched 43.5 kB in 0s (4343 kB/s) dpkg-name: info: moved 'libxdmcp-dev_1%3a1.1.5-2_arm64.deb' to '/srv/rebuilderd/tmp/tmpq4ym621c/libxdmcp-dev_1.1.5-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libblas3 arm64 3.12.1-7+b1 [132 kB] Fetched 132 kB in 0s (7149 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1228l44_/libblas3_3.12.1-7+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libuv1t64 arm64 1.51.0-2+b1 [149 kB] Fetched 149 kB in 0s (7695 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbvxvr_o0/libuv1t64_1.51.0-2+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 fontconfig arm64 2.17.1-5 [191 kB] Fetched 191 kB in 0s (16.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2us8avwu/fontconfig_2.17.1-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 cpp-aarch64-linux-gnu arm64 4:15.2.0-5 [5320 B] Fetched 5320 B in 0s (525 kB/s) dpkg-name: info: moved 'cpp-aarch64-linux-gnu_4%3a15.2.0-5_arm64.deb' to '/srv/rebuilderd/tmp/tmp5y96jmcy/cpp-aarch64-linux-gnu_15.2.0-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 gcc arm64 4:15.2.0-5 [5160 B] Fetched 5160 B in 0s (352 kB/s) dpkg-name: info: moved 'gcc_4%3a15.2.0-5_arm64.deb' to '/srv/rebuilderd/tmp/tmpycn3xggg/gcc_15.2.0-5_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 libuuid1 arm64 2.42-1 [31.9 kB] Fetched 31.9 kB in 0s (1995 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpalt5x_xm/libuuid1_2.42-1_arm64.deb' dpkg-buildpackage: info: source package debootsnap-dummy dpkg-buildpackage: info: source version 1.0 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Equivs Dummy Package Generator dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/debootsnap-dummy/ dh_install dh_installdocs dh_installchangelogs dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'debootsnap-dummy' in '../debootsnap-dummy_1.0_all.deb'. dpkg-genbuildinfo --build=binary -O../debootsnap-dummy_1.0_arm64.buildinfo dpkg-genchanges --build=binary -O../debootsnap-dummy_1.0_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) The package has been created. Attention, the package has been created in the /srv/rebuilderd/tmp/tmp8hyjeck9/cache directory, not in ".." as indicated by the message above! I: automatically chosen mode: unshare I: chroot architecture arm64 is equal to the host's architecture I: using /srv/rebuilderd/tmp/mmdebstrap.LJDZe7OUol as tempdir I: running --setup-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/setup00.sh /srv/rebuilderd/tmp/mmdebstrap.LJDZe7OUol 127.0.0.1 - - [09/Apr/2026 20:57:45] code 404, message File not found 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./InRelease HTTP/1.1" 404 - Ign:1 http://localhost:45557 ./ InRelease 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./Release HTTP/1.1" 200 - Get:2 http://localhost:45557 ./ Release [462 B] 127.0.0.1 - - [09/Apr/2026 20:57:45] code 404, message File not found 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./Release.gpg HTTP/1.1" 404 - Ign:3 http://localhost:45557 ./ Release.gpg 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./Packages HTTP/1.1" 200 - Get:4 http://localhost:45557 ./ Packages [536 kB] Fetched 536 kB in 0s (13.4 MB/s) Reading package lists... usr-is-merged found but not real -- not running merged-usr setup hook I: skipping apt-get update because it was already run I: downloading packages with apt... 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./gcc-16-base_16-20260322-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./libc-gconv-modules-extra_2.42-14_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./libc6_2.42-14_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./libgcc-s1_16-20260322-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./mawk_1.3.4.20260302-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./base-files_14_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./libtinfo6_6.6%2b20251231-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./debianutils_5.23.2%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./bash_5.3-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./libacl1_2.3.2-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./libattr1_2.5.2-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./libgmp10_6.3.0%2bdfsg-5%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./libpcre2-8-0_10.46-1%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./libselinux1_3.9-4%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./libzstd1_1.5.7%2bdfsg-3%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./zlib1g_1.3.dfsg%2breally1.3.2-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./libssl3t64_3.6.1-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./openssl-provider-legacy_3.6.1-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./libsystemd0_260.1-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./coreutils_9.10-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./dash_0.5.12-12%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./diffutils_3.12-1%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./libbz2-1.0_1.0.8-6%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./liblzma5_5.8.2-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./libmd0_1.1.0-2%2bb2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./tar_1.35%2bdfsg-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./dpkg_1.23.7_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./findutils_4.10.0-3%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./grep_3.12-1%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./gzip_1.13-1%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./hostname_3.25%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./ncurses-bin_6.6%2b20251231-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./libcrypt1_4.5.1-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./perl-base_5.40.1-7_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./sed_4.9-2%2bb2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./libaudit-common_4.1.2-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./libcap-ng0_0.9.2-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./libaudit1_4.1.2-1%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./libdb5.3t64_5.3.28%2bdfsg2-11_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./debconf_1.5.92_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./libpam0g_1.7.0-5%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./libpam-modules-bin_1.7.0-5%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./libpam-modules_1.7.0-5%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./libpam-runtime_1.7.0-5_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./libblkid1_2.42-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./libmount1_2.42-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./libsmartcols1_2.42-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./libudev1_260.1-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./libuuid1_2.42-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./util-linux_2.42-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./libdebconfclient0_0.282%2bb2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./base-passwd_3.6.8%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./init-system-helpers_1.69_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./libc-bin_2.42-14_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./ncurses-base_6.6%2b20251231-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:45] "GET /./sysvinit-utils_3.18-1_arm64.deb HTTP/1.1" 200 - I: extracting archives... I: running --extract-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/extract00.sh /srv/rebuilderd/tmp/mmdebstrap.LJDZe7OUol 127.0.0.1 - - [09/Apr/2026 20:57:48] code 404, message File not found 127.0.0.1 - - [09/Apr/2026 20:57:48] "GET /./InRelease HTTP/1.1" 404 - Ign:1 http://localhost:45557 ./ InRelease 127.0.0.1 - - [09/Apr/2026 20:57:48] "GET /./Release HTTP/1.1" 304 - Hit:2 http://localhost:45557 ./ Release 127.0.0.1 - - [09/Apr/2026 20:57:48] code 404, message File not found 127.0.0.1 - - [09/Apr/2026 20:57:48] "GET /./Release.gpg HTTP/1.1" 404 - Ign:3 http://localhost:45557 ./ Release.gpg Reading package lists... usr-is-merged found but not real -- not running merged-usr extract hook I: installing essential packages... I: running --essential-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/essential00.sh /srv/rebuilderd/tmp/mmdebstrap.LJDZe7OUol usr-is-merged was not installed in a previous hook -- not running merged-usr essential hook I: installing remaining packages inside the chroot... 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./libexpat1_2.7.5-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./libpython3.13-minimal_3.13.12-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./python3.13-minimal_3.13.12-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./python3-minimal_3.13.9-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./media-types_14.0.0_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./netbase_6.5_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./tzdata_2026a-3_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./libffi8_3.5.2-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./libncursesw6_6.6%2b20251231-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./readline-common_8.3-4_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./libreadline8t64_8.3-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./libsqlite3-0_3.46.1-9%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./libpython3.13-stdlib_3.13.12-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./python3.13_3.13.12-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./libpython3-stdlib_3.13.9-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./python3_3.13.9-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./python3-numpy-dev_2.3.5%2bds-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./libblas3_3.12.1-7%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./libgfortran5_16-20260322-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./liblapack3_3.12.1-7%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./libstdc%2b%2b6_16-20260322-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./python3-numpy_2.3.5%2bds-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./libpython3.14-minimal_3.14.3-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./python3.14-minimal_3.14.3-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./libtext-charwidth-perl_0.04-11%2bb5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./libtext-wrapi18n-perl_0.06-10_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./sensible-utils_0.0.26_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./libuchardet0_0.0.8-2%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./groff-base_1.23.0-10%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./bsdextrautils_2.42-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./libgdbm6t64_1.26-1%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./libpipeline1_1.5.8-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./libseccomp2_2.6.0-2%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./man-db_2.13.1-1%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./libproc2-0_4.0.4-9%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./procps_4.0.4-9%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./bzip2_1.0.8-6%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./libmagic-mgc_5.46-5%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./libmagic1t64_5.46-5%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./file_5.46-5%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./gettext-base_0.23.2-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./perl-modules-5.40_5.40.1-7_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./libgdbm-compat4t64_1.26-1%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./libperl5.40_5.40.1-7_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./perl_5.40.1-7_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./ucf_3.0053_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./xz-utils_5.8.2-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./m4_1.4.21-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./autoconf_2.72-6_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./autotools-dev_20240727.1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./automake_1.18.1-4_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./autopoint_0.23.2-2_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./libsframe3_2.46-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:56] "GET /./binutils-common_2.46-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libbinutils_2.46-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libgprofng0_2.46-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libctf-nobfd0_2.46-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libctf0_2.46-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libjansson4_2.14-2%2bb4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./binutils-aarch64-linux-gnu_2.46-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./binutils_2.46-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libc-dev-bin_2.42-14_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./linux-libc-dev_6.19.10-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./rpcsvc-proto_1.4.3-1%2bb2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libc6-dev_2.42-14_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./gcc-15-base_15.2.0-16_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libisl23_0.27-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libmpfr6_4.2.2-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libmpc3_1.3.1-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./cpp-15-aarch64-linux-gnu_15.2.0-16_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./cpp-15_15.2.0-16_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./cpp-aarch64-linux-gnu_15.2.0-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./cpp_15.2.0-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libcc1-0_16-20260322-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libgomp1_16-20260322-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libitm1_16-20260322-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libatomic1_16-20260322-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libasan8_16-20260322-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./liblsan0_16-20260322-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libtsan2_16-20260322-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libubsan1_16-20260322-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libhwasan0_16-20260322-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libgcc-15-dev_15.2.0-16_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./gcc-15-aarch64-linux-gnu_15.2.0-16_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./gcc-15_15.2.0-16_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./gcc-aarch64-linux-gnu_15.2.0-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./gcc_15.2.0-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libstdc%2b%2b-15-dev_15.2.0-16_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./g%2b%2b-15-aarch64-linux-gnu_15.2.0-16_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./g%2b%2b-15_15.2.0-16_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./g%2b%2b-aarch64-linux-gnu_15.2.0-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./g%2b%2b_15.2.0-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./make_4.4.1-3%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libdpkg-perl_1.23.7_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./patch_2.8-2%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./dpkg-dev_1.23.7_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./build-essential_12.12_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libxxhash0_0.8.3-2%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./liblz4-1_1.10.0-8_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libnettle8t64_3.10.2-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libxml2-16_2.15.2%2bdfsg-0.1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libarchive13t64_3.8.5-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libnghttp3-9_1.15.0-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libngtcp2-16_1.21.0-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libbrotli1_1.2.0-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libkrb5support0_1.22.1-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libcom-err2_1.47.4-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libk5crypto3_1.22.1-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libkeyutils1_1.6.3-6%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libkrb5-3_1.22.1-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libgssapi-krb5-2_1.22.1-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libunistring5_1.4.2-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libidn2-0_2.3.8-4%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libsasl2-modules-db_2.1.28%2bdfsg1-10_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libsasl2-2_2.1.28%2bdfsg1-10_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libldap2_2.6.10%2bdfsg-1%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libnghttp2-14_1.68.1-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libngtcp2-crypto-ossl0_1.21.0-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libpsl5t64_0.21.5-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libhogweed6t64_3.10.2-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libp11-kit0_0.26.2-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libtasn1-6_4.21.0-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libgnutls30t64_3.8.12-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./librtmp1_2.4%2b20151223.gitfa8646d.1-3%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libssh2-1t64_1.11.1-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libcurl4t64_8.19.0-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libjsoncpp26_1.9.6-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./librhash1_1.4.6-1.1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libuv1t64_1.51.0-2%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./cmake_4.3.1-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./comerr-dev_2.1-1.47.4-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libdebhelper-perl_13.31_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libtool_2.5.4-10_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./dh-autoreconf_22_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libarchive-zip-perl_1.68-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libfile-stripnondeterminism-perl_1.15.0-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./dh-strip-nondeterminism_1.15.0-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libelf1t64_0.194-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./dwz_0.16-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./gettext_0.23.2-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./intltool-debian_0.35.0%2b20060710.6_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./po-debconf_1.0.22_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./debhelper_13.31_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libpython3.13_3.13.12-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libexpat1-dev_2.7.5-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./zlib1g-dev_1.3.dfsg%2breally1.3.2-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libpython3.13-dev_3.13.12-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libpython3-dev_3.13.9-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libpython3.14-stdlib_3.14.3-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libpython3.14_3.14.3-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libpython3.14-dev_3.14.3-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libpython3-all-dev_3.13.9-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libkpathsea6_2025.20250727.75242%2bds-5%2bb2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libgssrpc4t64_1.22.1-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libkadm5clnt-mit12_1.22.1-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libkdb5-10t64_1.22.1-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libkadm5srv-mit12_1.22.1-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./krb5-multidev_1.22.1-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libdrm-common_2.4.131-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libdrm2_2.4.131-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libglvnd0_1.7.0-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libxau6_1.0.11-1%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libxdmcp6_1.1.5-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libxcb1_1.17.0-2%2bb2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libx11-data_1.8.13-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libx11-6_1.8.13-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libdrm-amdgpu1_2.4.131-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libbsd0_0.12.2-2%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libedit2_3.1-20251016-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:57] "GET /./libz3-4_4.13.3-1%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libllvm21_21.1.8-7_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libsensors-config_3.6.2-2_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libsensors5_3.6.2-2%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libx11-xcb1_1.8.13-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libxcb-dri3-0_1.17.0-2%2bb2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libxcb-present0_1.17.0-2%2bb2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libxcb-randr0_1.17.0-2%2bb2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libxcb-sync1_1.17.0-2%2bb2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libxcb-xfixes0_1.17.0-2%2bb2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libxshmfence1_1.3.3-1%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./mesa-libgallium_26.0.4-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libgbm1_26.0.4-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libvulkan1_1.4.341.0-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libgl1-mesa-dri_26.0.4-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libxcb-glx0_1.17.0-2%2bb2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libxcb-shm0_1.17.0-2%2bb2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libxext6_1.3.4-1%2bb4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libxxf86vm1_1.1.4-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libglx-mesa0_26.0.4-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libglx0_1.7.0-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libgl1_1.7.0-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./xkb-data_2.47-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libxkbcommon0_1.13.1-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libxcb-xkb1_1.17.0-2%2bb2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libxkbcommon-x11-0_1.13.1-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libpng16-16t64_1.6.56-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libpng-dev_1.6.56-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libwayland-client0_1.24.0-2%2bb2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libegl-mesa0_26.0.4-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libegl1_1.7.0-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libevdev2_1.13.6%2bdfsg-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libglib2.0-0t64_2.88.0-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libgudev-1.0-0_238-7%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libwacom-common_2.18.0-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libwacom9_2.18.0-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libinput-bin_1.31.0-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./shared-mime-info_2.4-5%2bb4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libdouble-conversion3_3.4.0-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libicu78_78.3-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libpcre2-16-0_10.46-1%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libqt5core5t64_5.15.17%2bdfsg-7%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libfreetype6_2.14.3%2bdfsg-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./fonts-dejavu-mono_2.37-8_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./fonts-dejavu-core_2.37-8_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./fontconfig-config_2.17.1-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libfontconfig1_2.17.1-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./fontconfig_2.17.1-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libgraphite2-3_1.3.14-13_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libharfbuzz0b_12.3.2-2%2bb2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./x11-common_7.7%2b26_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libice6_1.1.1-1%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libmtdev1t64_1.1.7-1%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libinput10_1.31.0-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libjpeg62-turbo_2.1.5-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libmd4c0_0.5.2-2%2bb2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libdbus-1-3_1.16.2-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libqt5dbus5t64_5.15.17%2bdfsg-7%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libqt5network5t64_5.15.17%2bdfsg-7%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libsm6_1.2.6-1%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libxcb-icccm4_0.4.2-1%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libxcb-util1_0.4.1-1%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libxcb-image0_0.4.0-2%2bb3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libxcb-keysyms1_0.4.1-1%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libxcb-render0_1.17.0-2%2bb2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libxcb-render-util0_0.3.10-1%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libxcb-shape0_1.17.0-2%2bb2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libxcb-xinerama0_1.17.0-2%2bb2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libxcb-xinput0_1.17.0-2%2bb2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libxrender1_0.9.12-1%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libqt5gui5t64_5.15.17%2bdfsg-7%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libqt5widgets5t64_5.15.17%2bdfsg-7%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libqt5opengl5t64_5.15.17%2bdfsg-7%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./xorg-sgml-doctools_1.12.1-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./x11proto-dev_2025.1-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libice-dev_1.1.1-1%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./uuid-dev_2.42-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libsm-dev_1.2.6-1%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libxpm4_3.5.17-1%2bb4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libsz2_1.1.6-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libhdf5-310_1.14.6%2brepack-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libhdf5-hl-310_1.14.6%2brepack-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libhdf5-cpp-310_1.14.6%2brepack-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libhdf5-hl-cpp-310_1.14.6%2brepack-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libngtcp2-crypto-gnutls8_1.21.0-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libcurl3t64-gnutls_8.19.0-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libnetcdf22_4.10.0-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libbrotli-dev_1.2.0-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libidn2-dev_2.3.8-4%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libkrb5-dev_1.22.1-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libldap-dev_2.6.10%2bdfsg-1%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libpkgconf7_2.5.1-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./pkgconf-bin_2.5.1-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./pkgconf_2.5.1-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libnghttp2-dev_1.68.1-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libnghttp3-dev_1.15.0-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libngtcp2-crypto-ossl-dev_1.21.0-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libngtcp2-dev_1.21.0-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libpsl-dev_0.21.5-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:58] "GET /./libgmpxx4ldbl_6.3.0%2bdfsg-5%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libgmp-dev_6.3.0%2bdfsg-5%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libevent-2.1-7t64_2.1.12-stable-10%2bb2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libunbound8_1.24.2-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libgnutls-dane0t64_3.8.12-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libp11-kit-dev_0.26.2-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libtasn1-6-dev_4.21.0-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./nettle-dev_3.10.2-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libgnutls28-dev_3.8.12-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./librtmp-dev_2.4%2b20151223.gitfa8646d.1-3%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libssl-dev_3.6.1-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libssh2-1-dev_1.11.1-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libzstd-dev_1.5.7%2bdfsg-3%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libcurl4-openssl-dev_8.19.0-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libhdf5-fortran-310_1.14.6%2brepack-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libhdf5-hl-fortran-310_1.14.6%2brepack-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libjpeg62-turbo-dev_2.1.5-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libjpeg-dev_2.1.5-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libaec0_1.1.6-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libaec-dev_1.1.6-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./hdf5-helpers_1.14.6%2brepack-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libhdf5-dev_1.14.6%2brepack-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./liblzma-dev_5.8.2-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libxml2-dev_2.15.2%2bdfsg-0.1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libnetcdf-dev_4.10.0-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libgles2_1.7.0-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./python3-autocommand_2.2.2-4_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./python3-typing-extensions_4.15.0-2_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./python3-typeguard_4.4.4-2_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libglm-dev_1.0.1%2bds-3_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libpixman-1-0_0.46.4-1%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libcairo2_1.18.4-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libzzip-0-13t64_0.13.78%2bdfsg.1-0.2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libxi6_1.8.2-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libglut3.12_3.4.0-6%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libopengl0_1.7.0-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libglu1-mesa_9.0.2-1.1%2bb4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libxau-dev_1.0.11-1%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libxdmcp-dev_1.1.5-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./xtrans-dev_1.6.0-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libxcb1-dev_1.17.0-2%2bb2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libx11-dev_1.8.13-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libglx-dev_1.7.0-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libgl-dev_1.7.0-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libopengl-dev_1.7.0-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libglu1-mesa-dev_9.0.2-1.1%2bb4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libxext-dev_1.3.4-1%2bb4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libxt6t64_1.2.1-1.3%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libxt-dev_1.2.1-1.3%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libglut-dev_3.4.0-6%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./python3-pyqt5.sip_12.17.2-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libqt5xml5t64_5.15.17%2bdfsg-7%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libqt5designer5_5.15.17-4%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libqt5sql5t64_5.15.17%2bdfsg-7%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libqt5help5_5.15.17-4%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libavahi-common-data_0.8-18_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libavahi-common3_0.8-18_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libavahi-client3_0.8-18_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libcups2t64_2.4.16-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libqt5printsupport5t64_5.15.17%2bdfsg-7%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libqt5test5t64_5.15.17%2bdfsg-7%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./python3-pyqt5_5.15.11%2bdfsg-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./python3.13-dev_3.13.12-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./python3.14_3.14.3-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./python3-more-itertools_10.8.0-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./python3-inflect_7.5.0-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./python3-zipp_3.23.0-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libbz2-dev_1.0.8-6%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libfreetype-dev_2.14.3%2bdfsg-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libpaper2_2.2.5-0.3%2bb3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libptexenc1_2025.20250727.75242%2bds-5%2bb2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libsynctex2_2025.20250727.75242%2bds-5%2bb2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libtexlua53-5_2025.20250727.75242%2bds-5%2bb2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./t1utils_1.41-4%2bb2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./tex-common_6.20_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libmpfi0_1.5.4%2bds-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libpotrace0_1.16-2%2bb3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libteckit0_2.5.13%2bds-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libxmu6_1.1.3-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libxaw7_1.0.16-1%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./texlive-binaries_2025.20250727.75242%2bds-5%2bb2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./python3-jaraco.context_6.0.1-2_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./python3-jaraco.functools_4.1.0-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./python3-jaraco.text_4.0.0-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./python3-pyqt5.qtopengl_5.15.11%2bdfsg-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libglew2.3_2.3.1-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libglew-dev_2.3.1-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./python3-opengl_3.1.10%2bdfsg-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./dh-python_7.20260309_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./xdg-utils_1.2.1-2_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./python3-pkg-resources_78.1.1-0.1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./python3-setuptools_78.1.1-0.1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./freeglut3-dev_3.4.0-6%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libpaper-utils_2.2.5-0.3%2bb3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./texlive-base_2025.20260124-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./libjs-sphinxdoc_8.2.3-12_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./python3-dev_3.13.9-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./fonts-lmodern_2.005-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./texlive-latex-base_2025.20260124-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./python3-all_3.13.9-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./python3.14-dev_3.14.3-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./python3-all-dev_3.13.9-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [09/Apr/2026 20:57:59] "GET /./debootsnap-dummy_1.0_all.deb HTTP/1.1" 200 - I: running --customize-hook directly: /srv/rebuilderd/tmp/tmp8hyjeck9/apt_install.sh /srv/rebuilderd/tmp/mmdebstrap.LJDZe7OUol Reading package lists... Building dependency tree... Reading state information... libpython3-all-dev is already the newest version (3.13.9-3). libpython3-all-dev set to manually installed. libkpathsea6 is already the newest version (2025.20250727.75242+ds-5+b2). libkpathsea6 set to manually installed. libmpfr6 is already the newest version (4.2.2-3). libmpfr6 set to manually installed. krb5-multidev is already the newest version (1.22.1-2). krb5-multidev set to manually installed. libdrm2 is already the newest version (2.4.131-1). libdrm2 set to manually installed. libgl1 is already the newest version (1.7.0-3). libgl1 set to manually installed. libxkbcommon-x11-0 is already the newest version (1.13.1-1). libxkbcommon-x11-0 set to manually installed. libpng-dev is already the newest version (1.6.56-1). libpng-dev set to manually installed. tar is already the newest version (1.35+dfsg-4). libxkbcommon0 is already the newest version (1.13.1-1). libxkbcommon0 set to manually installed. libarchive-zip-perl is already the newest version (1.68-1). libarchive-zip-perl set to manually installed. dash is already the newest version (0.5.12-12+b1). libgomp1 is already the newest version (16-20260322-1). libgomp1 set to manually installed. perl-base is already the newest version (5.40.1-7). libx11-6 is already the newest version (2:1.8.13-1). libx11-6 set to manually installed. libegl1 is already the newest version (1.7.0-3). libegl1 set to manually installed. g++ is already the newest version (4:15.2.0-5). g++ set to manually installed. libinput-bin is already the newest version (1.31.0-1). libinput-bin set to manually installed. libqt5opengl5t64 is already the newest version (5.15.17+dfsg-7+b1). libqt5opengl5t64 set to manually installed. libdouble-conversion3 is already the newest version (3.4.0-1). libdouble-conversion3 set to manually installed. libudev1 is already the newest version (260.1-1). libtsan2 is already the newest version (16-20260322-1). libtsan2 set to manually installed. libsm-dev is already the newest version (2:1.2.6-1+b1). libsm-dev set to manually installed. libicu78 is already the newest version (78.3-1). libicu78 set to manually installed. libgssapi-krb5-2 is already the newest version (1.22.1-2). libgssapi-krb5-2 set to manually installed. libtinfo6 is already the newest version (6.6+20251231-1). libblkid1 is already the newest version (2.42-1). libxpm4 is already the newest version (1:3.5.17-1+b4). libxpm4 set to manually installed. sensible-utils is already the newest version (0.0.26). sensible-utils set to manually installed. libc-bin is already the newest version (2.42-14). libqt5core5t64 is already the newest version (5.15.17+dfsg-7+b1). libqt5core5t64 set to manually installed. libhdf5-hl-310 is already the newest version (1.14.6+repack-2). libhdf5-hl-310 set to manually installed. libbsd0 is already the newest version (0.12.2-2+b1). libbsd0 set to manually installed. libglx0 is already the newest version (1.7.0-3). libglx0 set to manually installed. libgcc-s1 is already the newest version (16-20260322-1). sysvinit-utils is already the newest version (3.18-1). ncurses-base is already the newest version (6.6+20251231-1). binutils-aarch64-linux-gnu is already the newest version (2.46-3). binutils-aarch64-linux-gnu set to manually installed. libseccomp2 is already the newest version (2.6.0-2+b1). libseccomp2 set to manually installed. libhdf5-cpp-310 is already the newest version (1.14.6+repack-2). libhdf5-cpp-310 set to manually installed. libhdf5-hl-cpp-310 is already the newest version (1.14.6+repack-2). libhdf5-hl-cpp-310 set to manually installed. libsqlite3-0 is already the newest version (3.46.1-9+b1). libsqlite3-0 set to manually installed. libnetcdf-dev is already the newest version (1:4.10.0-1). libnetcdf-dev set to manually installed. libgles2 is already the newest version (1.7.0-3). libgles2 set to manually installed. libpam-modules-bin is already the newest version (1.7.0-5+b1). libpython3.13-dev is already the newest version (3.13.12-1). libpython3.13-dev set to manually installed. pkgconf is already the newest version (2.5.1-4). pkgconf set to manually installed. python3-autocommand is already the newest version (2.2.2-4). python3-autocommand set to manually installed. libxcb-render-util0 is already the newest version (0.3.10-1+b1). libxcb-render-util0 set to manually installed. libxcb-sync1 is already the newest version (1.17.0-2+b2). libxcb-sync1 set to manually installed. perl-modules-5.40 is already the newest version (5.40.1-7). perl-modules-5.40 set to manually installed. python3-typeguard is already the newest version (4.4.4-2). python3-typeguard set to manually installed. libnghttp3-dev is already the newest version (1.15.0-1). libnghttp3-dev set to manually installed. cpp-15 is already the newest version (15.2.0-16). cpp-15 set to manually installed. libtasn1-6-dev is already the newest version (4.21.0-2). libtasn1-6-dev set to manually installed. libngtcp2-crypto-ossl0 is already the newest version (1.21.0-1). libngtcp2-crypto-ossl0 set to manually installed. libc6-dev is already the newest version (2.42-14). libc6-dev set to manually installed. libedit2 is already the newest version (3.1-20251016-1). libedit2 set to manually installed. nettle-dev is already the newest version (3.10.2-1). nettle-dev set to manually installed. libglm-dev is already the newest version (1.0.1+ds-3). libglm-dev set to manually installed. libpixman-1-0 is already the newest version (0.46.4-1+b1). libpixman-1-0 set to manually installed. libperl5.40 is already the newest version (5.40.1-7). libperl5.40 set to manually installed. libxcb-image0 is already the newest version (0.4.0-2+b3). libxcb-image0 set to manually installed. libgmpxx4ldbl is already the newest version (2:6.3.0+dfsg-5+b1). libgmpxx4ldbl set to manually installed. libpython3.14 is already the newest version (3.14.3-5). libpython3.14 set to manually installed. libglx-mesa0 is already the newest version (26.0.4-1). libglx-mesa0 set to manually installed. libselinux1 is already the newest version (3.9-4+b1). libpython3.13-minimal is already the newest version (3.13.12-1). libpython3.13-minimal set to manually installed. libxcb-keysyms1 is already the newest version (0.4.1-1+b1). libxcb-keysyms1 set to manually installed. pkgconf-bin is already the newest version (2.5.1-4). pkgconf-bin set to manually installed. librtmp-dev is already the newest version (2.4+20151223.gitfa8646d.1-3+b1). librtmp-dev set to manually installed. libkrb5-3 is already the newest version (1.22.1-2). libkrb5-3 set to manually installed. liblsan0 is already the newest version (16-20260322-1). liblsan0 set to manually installed. libxml2-dev is already the newest version (2.15.2+dfsg-0.1). libxml2-dev set to manually installed. libssh2-1-dev is already the newest version (1.11.1-2). libssh2-1-dev set to manually installed. python3-typing-extensions is already the newest version (4.15.0-2). python3-typing-extensions set to manually installed. dpkg is already the newest version (1.23.7). libqt5gui5t64 is already the newest version (5.15.17+dfsg-7+b1). libqt5gui5t64 set to manually installed. libcairo2 is already the newest version (1.18.4-3). libcairo2 set to manually installed. init-system-helpers is already the newest version (1.69). libzstd1 is already the newest version (1.5.7+dfsg-3+b1). libzzip-0-13t64 is already the newest version (0.13.78+dfsg.1-0.2). libzzip-0-13t64 set to manually installed. libglut-dev is already the newest version (3.4.0-6+b1). libglut-dev set to manually installed. liblz4-1 is already the newest version (1.10.0-8). liblz4-1 set to manually installed. python3-pyqt5 is already the newest version (5.15.11+dfsg-3). python3-pyqt5 set to manually installed. libnghttp2-dev is already the newest version (1.68.1-1). libnghttp2-dev set to manually installed. libkrb5support0 is already the newest version (1.22.1-2). libkrb5support0 set to manually installed. libkadm5clnt-mit12 is already the newest version (1.22.1-2). libkadm5clnt-mit12 set to manually installed. gcc-15 is already the newest version (15.2.0-16). gcc-15 set to manually installed. libx11-data is already the newest version (2:1.8.13-1). libx11-data set to manually installed. diffutils is already the newest version (1:3.12-1+b1). python3.13-dev is already the newest version (3.13.12-1). python3.13-dev set to manually installed. libgprofng0 is already the newest version (2.46-3). libgprofng0 set to manually installed. python3 is already the newest version (3.13.9-3). python3 set to manually installed. libx11-xcb1 is already the newest version (2:1.8.13-1). libx11-xcb1 set to manually installed. libxcb-icccm4 is already the newest version (0.4.2-1+b1). libxcb-icccm4 set to manually installed. libqt5dbus5t64 is already the newest version (5.15.17+dfsg-7+b1). libqt5dbus5t64 set to manually installed. librhash1 is already the newest version (1.4.6-1.1). librhash1 set to manually installed. python3.14 is already the newest version (3.14.3-5). python3.14 set to manually installed. libglvnd0 is already the newest version (1.7.0-3). libglvnd0 set to manually installed. libtasn1-6 is already the newest version (4.21.0-2). libtasn1-6 set to manually installed. libxcb-util1 is already the newest version (0.4.1-1+b1). libxcb-util1 set to manually installed. libnghttp3-9 is already the newest version (1.15.0-1). libnghttp3-9 set to manually installed. python3-inflect is already the newest version (7.5.0-1). python3-inflect set to manually installed. libaec-dev is already the newest version (1.1.6-1). libaec-dev set to manually installed. libnettle8t64 is already the newest version (3.10.2-1). libnettle8t64 set to manually installed. libxcb-randr0 is already the newest version (1.17.0-2+b2). libxcb-randr0 set to manually installed. libdrm-amdgpu1 is already the newest version (2.4.131-1). libdrm-amdgpu1 set to manually installed. libcap-ng0 is already the newest version (0.9.2-1). python3-zipp is already the newest version (3.23.0-1). python3-zipp set to manually installed. gcc-15-base is already the newest version (15.2.0-16). gcc-15-base set to manually installed. libfreetype-dev is already the newest version (2.14.3+dfsg-1). libfreetype-dev set to manually installed. libsm6 is already the newest version (2:1.2.6-1+b1). libsm6 set to manually installed. libpython3.14-minimal is already the newest version (3.14.3-5). libpython3.14-minimal set to manually installed. libpaper2 is already the newest version (2.2.5-0.3+b3). libpaper2 set to manually installed. libffi8 is already the newest version (3.5.2-4). libffi8 set to manually installed. libhwasan0 is already the newest version (16-20260322-1). libhwasan0 set to manually installed. libsensors-config is already the newest version (1:3.6.2-2). libsensors-config set to manually installed. gzip is already the newest version (1.13-1+b1). libjsoncpp26 is already the newest version (1.9.6-5). libjsoncpp26 set to manually installed. texlive-binaries is already the newest version (2025.20250727.75242+ds-5+b2). texlive-binaries set to manually installed. libqt5widgets5t64 is already the newest version (5.15.17+dfsg-7+b1). libqt5widgets5t64 set to manually installed. libacl1 is already the newest version (2.3.2-3). python3-pyqt5.sip is already the newest version (12.17.2-1). python3-pyqt5.sip set to manually installed. python3-jaraco.text is already the newest version (4.0.0-1). python3-jaraco.text set to manually installed. python3-pyqt5.qtopengl is already the newest version (5.15.11+dfsg-3). python3-pyqt5.qtopengl set to manually installed. libavahi-common3 is already the newest version (0.8-18). libavahi-common3 set to manually installed. libelf1t64 is already the newest version (0.194-4). libelf1t64 set to manually installed. libxcb-xinerama0 is already the newest version (1.17.0-2+b2). libxcb-xinerama0 set to manually installed. libc-gconv-modules-extra is already the newest version (2.42-14). m4 is already the newest version (1.4.21-1). m4 set to manually installed. libcurl3t64-gnutls is already the newest version (8.19.0-3). libcurl3t64-gnutls set to manually installed. patch is already the newest version (2.8-2+b1). patch set to manually installed. libproc2-0 is already the newest version (2:4.0.4-9+b1). libproc2-0 set to manually installed. fonts-dejavu-core is already the newest version (2.37-8). fonts-dejavu-core set to manually installed. python3.13 is already the newest version (3.13.12-1). python3.13 set to manually installed. libpkgconf7 is already the newest version (2.5.1-4). libpkgconf7 set to manually installed. libexpat1-dev is already the newest version (2.7.5-1). libexpat1-dev set to manually installed. libxrender1 is already the newest version (1:0.9.12-1+b1). libxrender1 set to manually installed. libgl1-mesa-dri is already the newest version (26.0.4-1). libgl1-mesa-dri set to manually installed. libfontconfig1 is already the newest version (2.17.1-5). libfontconfig1 set to manually installed. libjpeg62-turbo is already the newest version (1:2.1.5-4). libjpeg62-turbo set to manually installed. libsensors5 is already the newest version (1:3.6.2-2+b1). libsensors5 set to manually installed. libxcb-glx0 is already the newest version (1.17.0-2+b2). libxcb-glx0 set to manually installed. libglew-dev is already the newest version (2.3.1-3). libglew-dev set to manually installed. dpkg-dev is already the newest version (1.23.7). dpkg-dev set to manually installed. libc-dev-bin is already the newest version (2.42-14). libc-dev-bin set to manually installed. libxcb1-dev is already the newest version (1.17.0-2+b2). libxcb1-dev set to manually installed. libgdbm-compat4t64 is already the newest version (1.26-1+b1). libgdbm-compat4t64 set to manually installed. libzstd-dev is already the newest version (1.5.7+dfsg-3+b1). libzstd-dev set to manually installed. python3-opengl is already the newest version (3.1.10+dfsg-1). python3-opengl set to manually installed. libpython3.13 is already the newest version (3.13.12-1). libpython3.13 set to manually installed. libqt5printsupport5t64 is already the newest version (5.15.17+dfsg-7+b1). libqt5printsupport5t64 set to manually installed. dh-python is already the newest version (7.20260309). dh-python set to manually installed. libptexenc1 is already the newest version (2025.20250727.75242+ds-5+b2). libptexenc1 set to manually installed. libgfortran5 is already the newest version (16-20260322-1). libgfortran5 set to manually installed. mesa-libgallium is already the newest version (26.0.4-1). mesa-libgallium set to manually installed. libsynctex2 is already the newest version (2025.20250727.75242+ds-5+b2). libsynctex2 set to manually installed. libxau-dev is already the newest version (1:1.0.11-1+b1). libxau-dev set to manually installed. libglx-dev is already the newest version (1.7.0-3). libglx-dev set to manually installed. libxcb-shape0 is already the newest version (1.17.0-2+b2). libxcb-shape0 set to manually installed. libglew2.3 is already the newest version (2.3.1-3). libglew2.3 set to manually installed. linux-libc-dev is already the newest version (6.19.10-1). linux-libc-dev set to manually installed. debianutils is already the newest version (5.23.2+b1). libmount1 is already the newest version (2.42-1). libkdb5-10t64 is already the newest version (1.22.1-2). libkdb5-10t64 set to manually installed. debhelper is already the newest version (13.31). debhelper set to manually installed. comerr-dev is already the newest version (2.1-1.47.4-1). comerr-dev set to manually installed. libglut3.12 is already the newest version (3.4.0-6+b1). libglut3.12 set to manually installed. libinput10 is already the newest version (1.31.0-1). libinput10 set to manually installed. libwacom-common is already the newest version (2.18.0-1). libwacom-common set to manually installed. libqt5network5t64 is already the newest version (5.15.17+dfsg-7+b1). libqt5network5t64 set to manually installed. fonts-dejavu-mono is already the newest version (2.37-8). fonts-dejavu-mono set to manually installed. libpython3.14-stdlib is already the newest version (3.14.3-5). libpython3.14-stdlib set to manually installed. libqt5help5 is already the newest version (5.15.17-4+b1). libqt5help5 set to manually installed. libattr1 is already the newest version (1:2.5.2-4). gcc-aarch64-linux-gnu is already the newest version (4:15.2.0-5). gcc-aarch64-linux-gnu set to manually installed. g++-15 is already the newest version (15.2.0-16). g++-15 set to manually installed. cpp-15-aarch64-linux-gnu is already the newest version (15.2.0-16). cpp-15-aarch64-linux-gnu set to manually installed. xtrans-dev is already the newest version (1.6.0-1). xtrans-dev set to manually installed. libxcb-dri3-0 is already the newest version (1.17.0-2+b2). libxcb-dri3-0 set to manually installed. libaudit1 is already the newest version (1:4.1.2-1+b1). xz-utils is already the newest version (5.8.2-2). xz-utils set to manually installed. xdg-utils is already the newest version (1.2.1-2). xdg-utils set to manually installed. tex-common is already the newest version (6.20). tex-common set to manually installed. shared-mime-info is already the newest version (2.4-5+b4). shared-mime-info set to manually installed. libssl3t64 is already the newest version (3.6.1-3). gcc-15-aarch64-linux-gnu is already the newest version (15.2.0-16). gcc-15-aarch64-linux-gnu set to manually installed. libnetcdf22 is already the newest version (1:4.10.0-1). libnetcdf22 set to manually installed. python3-pkg-resources is already the newest version (78.1.1-0.1). python3-pkg-resources set to manually installed. uuid-dev is already the newest version (2.42-1). uuid-dev set to manually installed. tzdata is already the newest version (2026a-3). tzdata set to manually installed. libpam0g is already the newest version (1.7.0-5+b1). libxcb-shm0 is already the newest version (1.17.0-2+b2). libxcb-shm0 set to manually installed. libfile-stripnondeterminism-perl is already the newest version (1.15.0-1). libfile-stripnondeterminism-perl set to manually installed. findutils is already the newest version (4.10.0-3+b1). libldap2 is already the newest version (2.6.10+dfsg-1+b1). libldap2 set to manually installed. libbrotli1 is already the newest version (1.2.0-3). libbrotli1 set to manually installed. libstdc++6 is already the newest version (16-20260322-1). libstdc++6 set to manually installed. python3-setuptools is already the newest version (78.1.1-0.1). python3-setuptools set to manually installed. python3.14-minimal is already the newest version (3.14.3-5). python3.14-minimal set to manually installed. libncursesw6 is already the newest version (6.6+20251231-1). libncursesw6 set to manually installed. libpotrace0 is already the newest version (1.16-2+b3). libpotrace0 set to manually installed. freeglut3-dev is already the newest version (3.4.0-6+b1). freeglut3-dev set to manually installed. libgnutls-dane0t64 is already the newest version (3.8.12-3). libgnutls-dane0t64 set to manually installed. libtool is already the newest version (2.5.4-10). libtool set to manually installed. netbase is already the newest version (6.5). netbase set to manually installed. mawk is already the newest version (1.3.4.20260302-1). libcups2t64 is already the newest version (2.4.16-1). libcups2t64 set to manually installed. libice6 is already the newest version (2:1.1.1-1+b1). libice6 set to manually installed. xkb-data is already the newest version (2.47-1). xkb-data set to manually installed. libsmartcols1 is already the newest version (2.42-1). build-essential is already the newest version (12.12). build-essential set to manually installed. procps is already the newest version (2:4.0.4-9+b1). procps set to manually installed. binutils-common is already the newest version (2.46-3). binutils-common set to manually installed. libunistring5 is already the newest version (1.4.2-1). libunistring5 set to manually installed. zlib1g-dev is already the newest version (1:1.3.dfsg+really1.3.2-3). zlib1g-dev set to manually installed. libgcc-15-dev is already the newest version (15.2.0-16). libgcc-15-dev set to manually installed. libopengl-dev is already the newest version (1.7.0-3). libopengl-dev set to manually installed. libpcre2-16-0 is already the newest version (10.46-1+b1). libpcre2-16-0 set to manually installed. cpp is already the newest version (4:15.2.0-5). cpp set to manually installed. gettext is already the newest version (0.23.2-2). gettext set to manually installed. libmagic1t64 is already the newest version (1:5.46-5+b1). libmagic1t64 set to manually installed. texlive-base is already the newest version (2025.20260124-1). texlive-base set to manually installed. libmtdev1t64 is already the newest version (1.1.7-1+b1). libmtdev1t64 set to manually installed. libgudev-1.0-0 is already the newest version (238-7+b1). libgudev-1.0-0 set to manually installed. bzip2 is already the newest version (1.0.8-6+b1). bzip2 set to manually installed. libaec0 is already the newest version (1.1.6-1). libaec0 set to manually installed. libjansson4 is already the newest version (2.14-2+b4). libjansson4 set to manually installed. libcurl4t64 is already the newest version (8.19.0-3). libcurl4t64 set to manually installed. g++-aarch64-linux-gnu is already the newest version (4:15.2.0-5). g++-aarch64-linux-gnu set to manually installed. libunbound8 is already the newest version (1.24.2-1). libunbound8 set to manually installed. python3-dev is already the newest version (3.13.9-3). python3-dev set to manually installed. intltool-debian is already the newest version (0.35.0+20060710.6). intltool-debian set to manually installed. libfreetype6 is already the newest version (2.14.3+dfsg-1). libfreetype6 set to manually installed. libpsl-dev is already the newest version (0.21.5-1). libpsl-dev set to manually installed. base-files is already the newest version (14). librtmp1 is already the newest version (2.4+20151223.gitfa8646d.1-3+b1). librtmp1 set to manually installed. make is already the newest version (4.4.1-3+b1). make set to manually installed. libtext-wrapi18n-perl is already the newest version (0.06-10). libtext-wrapi18n-perl set to manually installed. libctf-nobfd0 is already the newest version (2.46-3). libctf-nobfd0 set to manually installed. texlive-latex-base is already the newest version (2025.20260124-1). texlive-latex-base set to manually installed. python3-all is already the newest version (3.13.9-3). python3-all set to manually installed. libkadm5srv-mit12 is already the newest version (1.22.1-2). libkadm5srv-mit12 set to manually installed. libasan8 is already the newest version (16-20260322-1). libasan8 set to manually installed. libmd0 is already the newest version (1.1.0-2+b2). libvulkan1 is already the newest version (1.4.341.0-1). libvulkan1 set to manually installed. libglu1-mesa is already the newest version (9.0.2-1.1+b4). libglu1-mesa set to manually installed. hostname is already the newest version (3.25+b1). libxdmcp6 is already the newest version (1:1.1.5-2). libxdmcp6 set to manually installed. cmake is already the newest version (4.3.1-1). cmake set to manually installed. libxau6 is already the newest version (1:1.0.11-1+b1). libxau6 set to manually installed. libjpeg62-turbo-dev is already the newest version (1:2.1.5-4). libjpeg62-turbo-dev set to manually installed. libgssrpc4t64 is already the newest version (1.22.1-2). libgssrpc4t64 set to manually installed. python3-numpy is already the newest version (1:2.3.5+ds-3). python3-numpy set to manually installed. libsasl2-2 is already the newest version (2.1.28+dfsg1-10). libsasl2-2 set to manually installed. libatomic1 is already the newest version (16-20260322-1). libatomic1 set to manually installed. libhogweed6t64 is already the newest version (3.10.2-1). libhogweed6t64 set to manually installed. libsasl2-modules-db is already the newest version (2.1.28+dfsg1-10). libsasl2-modules-db set to manually installed. libxext-dev is already the newest version (2:1.3.4-1+b4). libxext-dev set to manually installed. fonts-lmodern is already the newest version (2.005-1). fonts-lmodern set to manually installed. hdf5-helpers is already the newest version (1.14.6+repack-2). hdf5-helpers set to manually installed. libpam-modules is already the newest version (1.7.0-5+b1). libpython3-stdlib is already the newest version (3.13.9-3). libpython3-stdlib set to manually installed. libtext-charwidth-perl is already the newest version (0.04-11+b5). libtext-charwidth-perl set to manually installed. libxml2-16 is already the newest version (2.15.2+dfsg-0.1). libxml2-16 set to manually installed. libhdf5-310 is already the newest version (1.14.6+repack-2). libhdf5-310 set to manually installed. libavahi-client3 is already the newest version (0.8-18). libavahi-client3 set to manually installed. libgmp-dev is already the newest version (2:6.3.0+dfsg-5+b1). libgmp-dev set to manually installed. file is already the newest version (1:5.46-5+b1). file set to manually installed. libice-dev is already the newest version (2:1.1.1-1+b1). libice-dev set to manually installed. x11proto-dev is already the newest version (2025.1-1). x11proto-dev set to manually installed. libpng16-16t64 is already the newest version (1.6.56-1). libpng16-16t64 set to manually installed. libxt6t64 is already the newest version (1:1.2.1-1.3+b1). libxt6t64 set to manually installed. libopengl0 is already the newest version (1.7.0-3). libopengl0 set to manually installed. po-debconf is already the newest version (1.0.22). po-debconf set to manually installed. gettext-base is already the newest version (0.23.2-2). gettext-base set to manually installed. libaudit-common is already the newest version (1:4.1.2-1). groff-base is already the newest version (1.23.0-10+b1). groff-base set to manually installed. libuchardet0 is already the newest version (0.0.8-2+b1). libuchardet0 set to manually installed. dh-autoreconf is already the newest version (22). dh-autoreconf set to manually installed. dh-strip-nondeterminism is already the newest version (1.15.0-1). dh-strip-nondeterminism set to manually installed. libbinutils is already the newest version (2.46-3). libbinutils set to manually installed. man-db is already the newest version (2.13.1-1+b1). man-db set to manually installed. libreadline8t64 is already the newest version (8.3-4). libreadline8t64 set to manually installed. libgdbm6t64 is already the newest version (1.26-1+b1). libgdbm6t64 set to manually installed. libidn2-dev is already the newest version (2.3.8-4+b1). libidn2-dev set to manually installed. libmagic-mgc is already the newest version (1:5.46-5+b1). libmagic-mgc set to manually installed. libngtcp2-crypto-ossl-dev is already the newest version (1.21.0-1). libngtcp2-crypto-ossl-dev set to manually installed. g++-15-aarch64-linux-gnu is already the newest version (15.2.0-16). g++-15-aarch64-linux-gnu set to manually installed. libnghttp2-14 is already the newest version (1.68.1-1). libnghttp2-14 set to manually installed. autopoint is already the newest version (0.23.2-2). autopoint set to manually installed. libpipeline1 is already the newest version (1.5.8-2). libpipeline1 set to manually installed. libngtcp2-dev is already the newest version (1.21.0-1). libngtcp2-dev set to manually installed. sed is already the newest version (4.9-2+b2). libpython3.13-stdlib is already the newest version (3.13.12-1). libpython3.13-stdlib set to manually installed. rpcsvc-proto is already the newest version (1.4.3-1+b2). rpcsvc-proto set to manually installed. libldap-dev is already the newest version (2.6.10+dfsg-1+b1). libldap-dev set to manually installed. libexpat1 is already the newest version (2.7.5-1). libexpat1 set to manually installed. libngtcp2-16 is already the newest version (1.21.0-1). libngtcp2-16 set to manually installed. libxcb-xkb1 is already the newest version (1.17.0-2+b2). libxcb-xkb1 set to manually installed. coreutils is already the newest version (9.10-1). libpython3-dev is already the newest version (3.13.9-3). libpython3-dev set to manually installed. ucf is already the newest version (3.0053). ucf set to manually installed. libpaper-utils is already the newest version (2.2.5-0.3+b3). libpaper-utils set to manually installed. t1utils is already the newest version (1.41-4+b2). t1utils set to manually installed. libbrotli-dev is already the newest version (1.2.0-3). libbrotli-dev set to manually installed. python3-more-itertools is already the newest version (10.8.0-1). python3-more-itertools set to manually installed. libdbus-1-3 is already the newest version (1.16.2-4). libdbus-1-3 set to manually installed. libsz2 is already the newest version (1.1.6-1). libsz2 set to manually installed. libgnutls28-dev is already the newest version (3.8.12-3). libgnutls28-dev set to manually installed. python3-jaraco.functools is already the newest version (4.1.0-1). python3-jaraco.functools set to manually installed. x11-common is already the newest version (1:7.7+26). x11-common set to manually installed. libxcb-present0 is already the newest version (1.17.0-2+b2). libxcb-present0 set to manually installed. libgmp10 is already the newest version (2:6.3.0+dfsg-5+b1). libglib2.0-0t64 is already the newest version (2.88.0-1). libglib2.0-0t64 set to manually installed. libxcb-xinput0 is already the newest version (1.17.0-2+b2). libxcb-xinput0 set to manually installed. liblzma-dev is already the newest version (5.8.2-2). liblzma-dev set to manually installed. libc6 is already the newest version (2.42-14). libhdf5-dev is already the newest version (1.14.6+repack-2). libhdf5-dev set to manually installed. ncurses-bin is already the newest version (6.6+20251231-1). libkrb5-dev is already the newest version (1.22.1-2). libkrb5-dev set to manually installed. libxshmfence1 is already the newest version (1.3.3-1+b1). libxshmfence1 set to manually installed. autotools-dev is already the newest version (20240727.1). autotools-dev set to manually installed. libdrm-common is already the newest version (2.4.131-1). libdrm-common set to manually installed. libssh2-1t64 is already the newest version (1.11.1-2). libssh2-1t64 set to manually installed. libxcb1 is already the newest version (1.17.0-2+b2). libxcb1 set to manually installed. openssl-provider-legacy is already the newest version (3.6.1-3). base-passwd is already the newest version (3.6.8+b1). libpython3.14-dev is already the newest version (3.14.3-5). libpython3.14-dev set to manually installed. libctf0 is already the newest version (2.46-3). libctf0 set to manually installed. libkeyutils1 is already the newest version (1.6.3-6+b1). libkeyutils1 set to manually installed. util-linux is already the newest version (2.42-1). libtexlua53-5 is already the newest version (2025.20250727.75242+ds-5+b2). libtexlua53-5 set to manually installed. libjpeg-dev is already the newest version (1:2.1.5-4). libjpeg-dev set to manually installed. libxt-dev is already the newest version (1:1.2.1-1.3+b1). libxt-dev set to manually installed. libbz2-1.0 is already the newest version (1.0.8-6+b1). libegl-mesa0 is already the newest version (26.0.4-1). libegl-mesa0 set to manually installed. libmd4c0 is already the newest version (0.5.2-2+b2). libmd4c0 set to manually installed. libgbm1 is already the newest version (26.0.4-1). libgbm1 set to manually installed. libwayland-client0 is already the newest version (1.24.0-2+b2). libwayland-client0 set to manually installed. binutils is already the newest version (2.46-3). binutils set to manually installed. libharfbuzz0b is already the newest version (12.3.2-2+b2). libharfbuzz0b set to manually installed. automake is already the newest version (1:1.18.1-4). automake set to manually installed. dwz is already the newest version (0.16-4). dwz set to manually installed. libxi6 is already the newest version (2:1.8.2-2). libxi6 set to manually installed. libngtcp2-crypto-gnutls8 is already the newest version (1.21.0-1). libngtcp2-crypto-gnutls8 set to manually installed. libp11-kit-dev is already the newest version (0.26.2-2). libp11-kit-dev set to manually installed. libsframe3 is already the newest version (2.46-3). libsframe3 set to manually installed. libhdf5-hl-fortran-310 is already the newest version (1.14.6+repack-2). libhdf5-hl-fortran-310 set to manually installed. libsystemd0 is already the newest version (260.1-1). libgraphite2-3 is already the newest version (1.3.14-13). libgraphite2-3 set to manually installed. libevent-2.1-7t64 is already the newest version (2.1.12-stable-10+b2). libevent-2.1-7t64 set to manually installed. media-types is already the newest version (14.0.0). media-types set to manually installed. libgl-dev is already the newest version (1.7.0-3). libgl-dev set to manually installed. libitm1 is already the newest version (16-20260322-1). libitm1 set to manually installed. libcrypt1 is already the newest version (1:4.5.1-1). libxext6 is already the newest version (2:1.3.4-1+b4). libxext6 set to manually installed. libcc1-0 is already the newest version (16-20260322-1). libcc1-0 set to manually installed. python3.13-minimal is already the newest version (3.13.12-1). python3.13-minimal set to manually installed. libpcre2-8-0 is already the newest version (10.46-1+b1). libglu1-mesa-dev is already the newest version (9.0.2-1.1+b4). libglu1-mesa-dev set to manually installed. libssl-dev is already the newest version (3.6.1-3). libssl-dev set to manually installed. debconf is already the newest version (1.5.92). libdb5.3t64 is already the newest version (5.3.28+dfsg2-11). libcurl4-openssl-dev is already the newest version (8.19.0-3). libcurl4-openssl-dev set to manually installed. libavahi-common-data is already the newest version (0.8-18). libavahi-common-data set to manually installed. libjs-sphinxdoc is already the newest version (8.2.3-12). libjs-sphinxdoc set to manually installed. libmpfi0 is already the newest version (1.5.4+ds-5). libmpfi0 set to manually installed. grep is already the newest version (3.12-1+b1). libdpkg-perl is already the newest version (1.23.7). libdpkg-perl set to manually installed. libpam-runtime is already the newest version (1.7.0-5). libstdc++-15-dev is already the newest version (15.2.0-16). libstdc++-15-dev set to manually installed. autoconf is already the newest version (2.72-6). autoconf set to manually installed. libidn2-0 is already the newest version (2.3.8-4+b1). libidn2-0 set to manually installed. libxmu6 is already the newest version (2:1.1.3-4). libxmu6 set to manually installed. libz3-4 is already the newest version (4.13.3-1+b1). libz3-4 set to manually installed. readline-common is already the newest version (8.3-4). readline-common set to manually installed. liblzma5 is already the newest version (5.8.2-2). libteckit0 is already the newest version (2.5.13+ds-1). libteckit0 set to manually installed. libbz2-dev is already the newest version (1.0.8-6+b1). libbz2-dev set to manually installed. python3-jaraco.context is already the newest version (6.0.1-2). python3-jaraco.context set to manually installed. libxcb-xfixes0 is already the newest version (1.17.0-2+b2). libxcb-xfixes0 set to manually installed. perl is already the newest version (5.40.1-7). perl set to manually installed. libisl23 is already the newest version (0.27-2). libisl23 set to manually installed. gcc-16-base is already the newest version (16-20260322-1). libqt5xml5t64 is already the newest version (5.15.17+dfsg-7+b1). libqt5xml5t64 set to manually installed. libwacom9 is already the newest version (2.18.0-1). libwacom9 set to manually installed. libxcb-render0 is already the newest version (1.17.0-2+b2). libxcb-render0 set to manually installed. libmpc3 is already the newest version (1.3.1-3). libmpc3 set to manually installed. libgnutls30t64 is already the newest version (3.8.12-3). libgnutls30t64 set to manually installed. libarchive13t64 is already the newest version (3.8.5-1). libarchive13t64 set to manually installed. python3.14-dev is already the newest version (3.14.3-5). python3.14-dev set to manually installed. zlib1g is already the newest version (1:1.3.dfsg+really1.3.2-3). python3-all-dev is already the newest version (3.13.9-3). python3-all-dev set to manually installed. libdebhelper-perl is already the newest version (13.31). libdebhelper-perl set to manually installed. libk5crypto3 is already the newest version (1.22.1-2). libk5crypto3 set to manually installed. python3-numpy-dev is already the newest version (1:2.3.5+ds-3). python3-numpy-dev set to manually installed. libhdf5-fortran-310 is already the newest version (1.14.6+repack-2). libhdf5-fortran-310 set to manually installed. libxaw7 is already the newest version (2:1.0.16-1+b1). libxaw7 set to manually installed. libubsan1 is already the newest version (16-20260322-1). libubsan1 set to manually installed. bsdextrautils is already the newest version (2.42-1). bsdextrautils set to manually installed. python3-minimal is already the newest version (3.13.9-3). python3-minimal set to manually installed. libdebconfclient0 is already the newest version (0.282+b2). libxxf86vm1 is already the newest version (1:1.1.4-2). libxxf86vm1 set to manually installed. bash is already the newest version (5.3-2). libp11-kit0 is already the newest version (0.26.2-2). libp11-kit0 set to manually installed. libxxhash0 is already the newest version (0.8.3-2+b1). libxxhash0 set to manually installed. libx11-dev is already the newest version (2:1.8.13-1). libx11-dev set to manually installed. fontconfig-config is already the newest version (2.17.1-5). fontconfig-config set to manually installed. libqt5test5t64 is already the newest version (5.15.17+dfsg-7+b1). libqt5test5t64 set to manually installed. libevdev2 is already the newest version (1.13.6+dfsg-1). libevdev2 set to manually installed. libpsl5t64 is already the newest version (0.21.5-1). libpsl5t64 set to manually installed. xorg-sgml-doctools is already the newest version (1:1.12.1-1). xorg-sgml-doctools set to manually installed. liblapack3 is already the newest version (3.12.1-7+b1). liblapack3 set to manually installed. libqt5designer5 is already the newest version (5.15.17-4+b1). libqt5designer5 set to manually installed. libcom-err2 is already the newest version (1.47.4-1). libcom-err2 set to manually installed. libqt5sql5t64 is already the newest version (5.15.17+dfsg-7+b1). libqt5sql5t64 set to manually installed. libllvm21 is already the newest version (1:21.1.8-7). libllvm21 set to manually installed. libxdmcp-dev is already the newest version (1:1.1.5-2). libxdmcp-dev set to manually installed. libblas3 is already the newest version (3.12.1-7+b1). libblas3 set to manually installed. libuv1t64 is already the newest version (1.51.0-2+b1). libuv1t64 set to manually installed. fontconfig is already the newest version (2.17.1-5). fontconfig set to manually installed. cpp-aarch64-linux-gnu is already the newest version (4:15.2.0-5). cpp-aarch64-linux-gnu set to manually installed. gcc is already the newest version (4:15.2.0-5). gcc set to manually installed. libuuid1 is already the newest version (2.42-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: running --customize-hook in shell: sh -c 'chroot "$1" dpkg -r debootsnap-dummy' exec /srv/rebuilderd/tmp/mmdebstrap.LJDZe7OUol (Reading database ... 38348 files and directories currently installed.) Removing debootsnap-dummy (1.0) ... I: running --customize-hook in shell: sh -c 'chroot "$1" dpkg-query --showformat '${binary:Package}=${Version}\n' --show > "$1/pkglist"' exec /srv/rebuilderd/tmp/mmdebstrap.LJDZe7OUol I: running special hook: download /pkglist ./pkglist I: running --customize-hook in shell: sh -c 'rm "$1/pkglist"' exec /srv/rebuilderd/tmp/mmdebstrap.LJDZe7OUol I: running special hook: upload sources.list /etc/apt/sources.list I: waiting for background processes to finish... I: cleaning package lists and apt cache... I: skipping cleanup/reproducible as requested I: creating tarball... I: done I: removing tempdir /srv/rebuilderd/tmp/mmdebstrap.LJDZe7OUol... I: success in 128.0879 seconds Downloading dependency 383 of 426: libxcb-xfixes0:arm64=1.17.0-2+b2 Downloading dependency 384 of 426: perl:arm64=5.40.1-7 Downloading dependency 385 of 426: libisl23:arm64=0.27-2 Downloading dependency 386 of 426: gcc-16-base:arm64=16-20260322-1 Downloading dependency 387 of 426: libqt5xml5t64:arm64=5.15.17+dfsg-7+b1 Downloading dependency 388 of 426: libwacom9:arm64=2.18.0-1 Downloading dependency 389 of 426: libxcb-render0:arm64=1.17.0-2+b2 Downloading dependency 390 of 426: libmpc3:arm64=1.3.1-3 Downloading dependency 391 of 426: libgnutls30t64:arm64=3.8.12-3 Downloading dependency 392 of 426: libarchive13t64:arm64=3.8.5-1 Downloading dependency 393 of 426: python3.14-dev:arm64=3.14.3-5 Downloading dependency 394 of 426: zlib1g:arm64=1:1.3.dfsg+really1.3.2-3 Downloading dependency 395 of 426: python3-all-dev:arm64=3.13.9-3 Downloading dependency 396 of 426: libdebhelper-perl:arm64=13.31 Downloading dependency 397 of 426: libk5crypto3:arm64=1.22.1-2 Downloading dependency 398 of 426: python3-numpy-dev:arm64=1:2.3.5+ds-3 Downloading dependency 399 of 426: libhdf5-fortran-310:arm64=1.14.6+repack-2 Downloading dependency 400 of 426: libxaw7:arm64=2:1.0.16-1+b1 Downloading dependency 401 of 426: libubsan1:arm64=16-20260322-1 Downloading dependency 402 of 426: bsdextrautils:arm64=2.42-1 Downloading dependency 403 of 426: python3-minimal:arm64=3.13.9-3 Downloading dependency 404 of 426: libdebconfclient0:arm64=0.282+b2 Downloading dependency 405 of 426: libxxf86vm1:arm64=1:1.1.4-2 Downloading dependency 406 of 426: bash:arm64=5.3-2 Downloading dependency 407 of 426: libp11-kit0:arm64=0.26.2-2 Downloading dependency 408 of 426: libxxhash0:arm64=0.8.3-2+b1 Downloading dependency 409 of 426: libx11-dev:arm64=2:1.8.13-1 Downloading dependency 410 of 426: fontconfig-config:arm64=2.17.1-5 Downloading dependency 411 of 426: libqt5test5t64:arm64=5.15.17+dfsg-7+b1 Downloading dependency 412 of 426: libevdev2:arm64=1.13.6+dfsg-1 Downloading dependency 413 of 426: libpsl5t64:arm64=0.21.5-1 Downloading dependency 414 of 426: xorg-sgml-doctools:arm64=1:1.12.1-1 Downloading dependency 415 of 426: liblapack3:arm64=3.12.1-7+b1 Downloading dependency 416 of 426: libqt5designer5:arm64=5.15.17-4+b1 Downloading dependency 417 of 426: libcom-err2:arm64=1.47.4-1 Downloading dependency 418 of 426: libqt5sql5t64:arm64=5.15.17+dfsg-7+b1 Downloading dependency 419 of 426: libllvm21:arm64=1:21.1.8-7 Downloading dependency 420 of 426: libxdmcp-dev:arm64=1:1.1.5-2 Downloading dependency 421 of 426: libblas3:arm64=3.12.1-7+b1 Downloading dependency 422 of 426: libuv1t64:arm64=1.51.0-2+b1 Downloading dependency 423 of 426: fontconfig:arm64=2.17.1-5 Downloading dependency 424 of 426: cpp-aarch64-linux-gnu:arm64=4:15.2.0-5 Downloading dependency 425 of 426: gcc:arm64=4:15.2.0-5 Downloading dependency 426 of 426: libuuid1:arm64=2.42-1 env --chdir=/srv/rebuilderd/tmp/rebuilderdSyAapZ/out DEB_BUILD_OPTIONS=parallel=8 LANG=C.UTF-8 LC_COLLATE=C.UTF-8 LC_CTYPE=C.UTF-8 SOURCE_DATE_EPOCH=1775243829 SBUILD_CONFIG=/srv/rebuilderd/tmp/debrebuildvW7ukZ/debrebuild.sbuildrc.cccOqHVJqXm6 sbuild --build=arm64 --host=arm64 --arch-any --no-arch-all --binNMU-changelog= pymol (3.1.0+dfsg-1+b3) sid; urgency=low, binary-only=yes * Binary-only non-maintainer upload for arm64; no source changes. * Rebuild against libglew2.3 -- arm Build Daemon (arm-ubc-03) Fri, 03 Apr 2026 19:17:09 +0000 --chroot=/srv/rebuilderd/tmp/debrebuildvW7ukZ/debrebuild.tar.W_wIEYyxy0hj --chroot-mode=unshare --dist=unstable --no-run-lintian --no-run-piuparts --no-run-autopkgtest --no-apt-update --no-apt-upgrade --no-apt-distupgrade --no-source --verbose --nolog --bd-uninstallable-explainer= --build-path=/build/reproducible-path --dsc-dir=pymol-3.1.0+dfsg /srv/rebuilderd/tmp/rebuilderdSyAapZ/inputs/pymol_3.1.0+dfsg-1.dsc I: consider moving your ~/.sbuildrc to /srv/rebuilderd/.config/sbuild/config.pl The Debian buildds switched to the "unshare" backend and sbuild will default to it in the future. To start using "unshare" add this to your `~/.config/sbuild/config.pl`: $chroot_mode = "unshare"; If you want to keep the old "schroot" mode even in the future, add the following to your `~/.config/sbuild/config.pl`: $chroot_mode = "schroot"; $schroot = "schroot"; sbuild: warning: descr(l1): found blank line where expected first heading sbuild (Debian sbuild) 0.89.3+deb13u4 (28 December 2025) on codethink02-arm64 +==============================================================================+ | pymol 3.1.0+dfsg-1+b3 (arm64) Thu, 09 Apr 2026 19:59:53 +0000 | +==============================================================================+ Package: pymol Version: 3.1.0+dfsg-1+b3 Source Version: 3.1.0+dfsg-1 Distribution: unstable Machine Architecture: arm64 Host Architecture: arm64 Build Architecture: arm64 Build Type: any I: No tarballs found in /srv/rebuilderd/.cache/sbuild I: Unpacking /srv/rebuilderd/tmp/debrebuildvW7ukZ/debrebuild.tar.W_wIEYyxy0hj to /srv/rebuilderd/tmp/tmp.sbuild.c3uuxhnb3G... I: Setting up the chroot... I: Creating chroot session... I: Setting up log color... I: Setting up apt archive... +------------------------------------------------------------------------------+ | Fetch source files Thu, 09 Apr 2026 20:00:02 +0000 | +------------------------------------------------------------------------------+ Local sources ------------- /srv/rebuilderd/tmp/rebuilderdSyAapZ/inputs/pymol_3.1.0+dfsg-1.dsc exists in /srv/rebuilderd/tmp/rebuilderdSyAapZ/inputs; copying to chroot sbuild: warning: descr(l1): found blank line where expected first heading +------------------------------------------------------------------------------+ | Install package build dependencies Thu, 09 Apr 2026 20:00:04 +0000 | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: cmake, debhelper-compat (= 13), dh-sequence-python3, freeglut3-dev, libfreetype-dev, libglew-dev, libglm-dev, libnetcdf-dev, libpng-dev, python3-all, python3-all-dev, python3-numpy, python3-opengl, python3-pyqt5, python3-pyqt5.qtopengl, python3-setuptools, texlive-latex-base, libxml2-dev, build-essential Filtered Build-Depends: cmake, debhelper-compat (= 13), dh-sequence-python3, freeglut3-dev, libfreetype-dev, libglew-dev, libglm-dev, libnetcdf-dev, libpng-dev, python3-all, python3-all-dev, python3-numpy, python3-opengl, python3-pyqt5, python3-pyqt5.qtopengl, python3-setuptools, texlive-latex-base, libxml2-dev, build-essential dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/build/reproducible-path/resolver-Y0JWMT/apt_archive/sbuild-build-depends-main-dummy.deb'. Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies +------------------------------------------------------------------------------+ | Check architectures Thu, 09 Apr 2026 20:00:09 +0000 | +------------------------------------------------------------------------------+ Arch check ok (arm64 included in any all) +------------------------------------------------------------------------------+ | Build environment Thu, 09 Apr 2026 20:00:09 +0000 | +------------------------------------------------------------------------------+ Kernel: Linux 6.12.74+deb13+1-cloud-arm64 #1 SMP Debian 6.12.74-2 (2026-03-08) arm64 (aarch64) Toolchain package versions: binutils_2.46-3 dpkg-dev_1.23.7 g++-15_15.2.0-16 gcc-15_15.2.0-16 libc6-dev_2.42-14 libstdc++-15-dev_15.2.0-16 libstdc++6_16-20260322-1 linux-libc-dev_6.19.10-1 Package versions: autoconf_2.72-6 automake_1:1.18.1-4 autopoint_0.23.2-2 autotools-dev_20240727.1 base-files_14 base-passwd_3.6.8+b1 bash_5.3-2 binutils_2.46-3 binutils-aarch64-linux-gnu_2.46-3 binutils-common_2.46-3 bsdextrautils_2.42-1 build-essential_12.12 bzip2_1.0.8-6+b1 cmake_4.3.1-1 comerr-dev_2.1-1.47.4-1 coreutils_9.10-1 cpp_4:15.2.0-5 cpp-15_15.2.0-16 cpp-15-aarch64-linux-gnu_15.2.0-16 cpp-aarch64-linux-gnu_4:15.2.0-5 dash_0.5.12-12+b1 debconf_1.5.92 debhelper_13.31 debianutils_5.23.2+b1 dh-autoreconf_22 dh-python_7.20260309 dh-strip-nondeterminism_1.15.0-1 diffutils_1:3.12-1+b1 dpkg_1.23.7 dpkg-dev_1.23.7 dwz_0.16-4 file_1:5.46-5+b1 findutils_4.10.0-3+b1 fontconfig_2.17.1-5 fontconfig-config_2.17.1-5 fonts-dejavu-core_2.37-8 fonts-dejavu-mono_2.37-8 fonts-lmodern_2.005-1 freeglut3-dev_3.4.0-6+b1 g++_4:15.2.0-5 g++-15_15.2.0-16 g++-15-aarch64-linux-gnu_15.2.0-16 g++-aarch64-linux-gnu_4:15.2.0-5 gcc_4:15.2.0-5 gcc-15_15.2.0-16 gcc-15-aarch64-linux-gnu_15.2.0-16 gcc-15-base_15.2.0-16 gcc-16-base_16-20260322-1 gcc-aarch64-linux-gnu_4:15.2.0-5 gettext_0.23.2-2 gettext-base_0.23.2-2 grep_3.12-1+b1 groff-base_1.23.0-10+b1 gzip_1.13-1+b1 hdf5-helpers_1.14.6+repack-2 hostname_3.25+b1 init-system-helpers_1.69 intltool-debian_0.35.0+20060710.6 krb5-multidev_1.22.1-2 libacl1_2.3.2-3 libaec-dev_1.1.6-1 libaec0_1.1.6-1 libarchive-zip-perl_1.68-1 libarchive13t64_3.8.5-1 libasan8_16-20260322-1 libatomic1_16-20260322-1 libattr1_1:2.5.2-4 libaudit-common_1:4.1.2-1 libaudit1_1:4.1.2-1+b1 libavahi-client3_0.8-18 libavahi-common-data_0.8-18 libavahi-common3_0.8-18 libbinutils_2.46-3 libblas3_3.12.1-7+b1 libblkid1_2.42-1 libbrotli-dev_1.2.0-3 libbrotli1_1.2.0-3 libbsd0_0.12.2-2+b1 libbz2-1.0_1.0.8-6+b1 libbz2-dev_1.0.8-6+b1 libc-bin_2.42-14 libc-dev-bin_2.42-14 libc-gconv-modules-extra_2.42-14 libc6_2.42-14 libc6-dev_2.42-14 libcairo2_1.18.4-3 libcap-ng0_0.9.2-1 libcc1-0_16-20260322-1 libcom-err2_1.47.4-1 libcrypt1_1:4.5.1-1 libctf-nobfd0_2.46-3 libctf0_2.46-3 libcups2t64_2.4.16-1 libcurl3t64-gnutls_8.19.0-3 libcurl4-openssl-dev_8.19.0-3 libcurl4t64_8.19.0-3 libdb5.3t64_5.3.28+dfsg2-11 libdbus-1-3_1.16.2-4 libdebconfclient0_0.282+b2 libdebhelper-perl_13.31 libdouble-conversion3_3.4.0-1 libdpkg-perl_1.23.7 libdrm-amdgpu1_2.4.131-1 libdrm-common_2.4.131-1 libdrm2_2.4.131-1 libedit2_3.1-20251016-1 libegl-mesa0_26.0.4-1 libegl1_1.7.0-3 libelf1t64_0.194-4 libevdev2_1.13.6+dfsg-1 libevent-2.1-7t64_2.1.12-stable-10+b2 libexpat1_2.7.5-1 libexpat1-dev_2.7.5-1 libffi8_3.5.2-4 libfile-stripnondeterminism-perl_1.15.0-1 libfontconfig1_2.17.1-5 libfreetype-dev_2.14.3+dfsg-1 libfreetype6_2.14.3+dfsg-1 libgbm1_26.0.4-1 libgcc-15-dev_15.2.0-16 libgcc-s1_16-20260322-1 libgdbm-compat4t64_1.26-1+b1 libgdbm6t64_1.26-1+b1 libgfortran5_16-20260322-1 libgl-dev_1.7.0-3 libgl1_1.7.0-3 libgl1-mesa-dri_26.0.4-1 libgles2_1.7.0-3 libglew-dev_2.3.1-3 libglew2.3_2.3.1-3 libglib2.0-0t64_2.88.0-1 libglm-dev_1.0.1+ds-3 libglu1-mesa_9.0.2-1.1+b4 libglu1-mesa-dev_9.0.2-1.1+b4 libglut-dev_3.4.0-6+b1 libglut3.12_3.4.0-6+b1 libglvnd0_1.7.0-3 libglx-dev_1.7.0-3 libglx-mesa0_26.0.4-1 libglx0_1.7.0-3 libgmp-dev_2:6.3.0+dfsg-5+b1 libgmp10_2:6.3.0+dfsg-5+b1 libgmpxx4ldbl_2:6.3.0+dfsg-5+b1 libgnutls-dane0t64_3.8.12-3 libgnutls28-dev_3.8.12-3 libgnutls30t64_3.8.12-3 libgomp1_16-20260322-1 libgprofng0_2.46-3 libgraphite2-3_1.3.14-13 libgssapi-krb5-2_1.22.1-2 libgssrpc4t64_1.22.1-2 libgudev-1.0-0_238-7+b1 libharfbuzz0b_12.3.2-2+b2 libhdf5-310_1.14.6+repack-2 libhdf5-cpp-310_1.14.6+repack-2 libhdf5-dev_1.14.6+repack-2 libhdf5-fortran-310_1.14.6+repack-2 libhdf5-hl-310_1.14.6+repack-2 libhdf5-hl-cpp-310_1.14.6+repack-2 libhdf5-hl-fortran-310_1.14.6+repack-2 libhogweed6t64_3.10.2-1 libhwasan0_16-20260322-1 libice-dev_2:1.1.1-1+b1 libice6_2:1.1.1-1+b1 libicu78_78.3-1 libidn2-0_2.3.8-4+b1 libidn2-dev_2.3.8-4+b1 libinput-bin_1.31.0-1 libinput10_1.31.0-1 libisl23_0.27-2 libitm1_16-20260322-1 libjansson4_2.14-2+b4 libjpeg-dev_1:2.1.5-4 libjpeg62-turbo_1:2.1.5-4 libjpeg62-turbo-dev_1:2.1.5-4 libjs-sphinxdoc_8.2.3-12 libjsoncpp26_1.9.6-5 libk5crypto3_1.22.1-2 libkadm5clnt-mit12_1.22.1-2 libkadm5srv-mit12_1.22.1-2 libkdb5-10t64_1.22.1-2 libkeyutils1_1.6.3-6+b1 libkpathsea6_2025.20250727.75242+ds-5+b2 libkrb5-3_1.22.1-2 libkrb5-dev_1.22.1-2 libkrb5support0_1.22.1-2 liblapack3_3.12.1-7+b1 libldap-dev_2.6.10+dfsg-1+b1 libldap2_2.6.10+dfsg-1+b1 libllvm21_1:21.1.8-7 liblsan0_16-20260322-1 liblz4-1_1.10.0-8 liblzma-dev_5.8.2-2 liblzma5_5.8.2-2 libmagic-mgc_1:5.46-5+b1 libmagic1t64_1:5.46-5+b1 libmd0_1.1.0-2+b2 libmd4c0_0.5.2-2+b2 libmount1_2.42-1 libmpc3_1.3.1-3 libmpfi0_1.5.4+ds-5 libmpfr6_4.2.2-3 libmtdev1t64_1.1.7-1+b1 libncursesw6_6.6+20251231-1 libnetcdf-dev_1:4.10.0-1 libnetcdf22_1:4.10.0-1 libnettle8t64_3.10.2-1 libnghttp2-14_1.68.1-1 libnghttp2-dev_1.68.1-1 libnghttp3-9_1.15.0-1 libnghttp3-dev_1.15.0-1 libngtcp2-16_1.21.0-1 libngtcp2-crypto-gnutls8_1.21.0-1 libngtcp2-crypto-ossl-dev_1.21.0-1 libngtcp2-crypto-ossl0_1.21.0-1 libngtcp2-dev_1.21.0-1 libopengl-dev_1.7.0-3 libopengl0_1.7.0-3 libp11-kit-dev_0.26.2-2 libp11-kit0_0.26.2-2 libpam-modules_1.7.0-5+b1 libpam-modules-bin_1.7.0-5+b1 libpam-runtime_1.7.0-5 libpam0g_1.7.0-5+b1 libpaper-utils_2.2.5-0.3+b3 libpaper2_2.2.5-0.3+b3 libpcre2-16-0_10.46-1+b1 libpcre2-8-0_10.46-1+b1 libperl5.40_5.40.1-7 libpipeline1_1.5.8-2 libpixman-1-0_0.46.4-1+b1 libpkgconf7_2.5.1-4 libpng-dev_1.6.56-1 libpng16-16t64_1.6.56-1 libpotrace0_1.16-2+b3 libproc2-0_2:4.0.4-9+b1 libpsl-dev_0.21.5-1 libpsl5t64_0.21.5-1 libptexenc1_2025.20250727.75242+ds-5+b2 libpython3-all-dev_3.13.9-3 libpython3-dev_3.13.9-3 libpython3-stdlib_3.13.9-3 libpython3.13_3.13.12-1 libpython3.13-dev_3.13.12-1 libpython3.13-minimal_3.13.12-1 libpython3.13-stdlib_3.13.12-1 libpython3.14_3.14.3-5 libpython3.14-dev_3.14.3-5 libpython3.14-minimal_3.14.3-5 libpython3.14-stdlib_3.14.3-5 libqt5core5t64_5.15.17+dfsg-7+b1 libqt5dbus5t64_5.15.17+dfsg-7+b1 libqt5designer5_5.15.17-4+b1 libqt5gui5t64_5.15.17+dfsg-7+b1 libqt5help5_5.15.17-4+b1 libqt5network5t64_5.15.17+dfsg-7+b1 libqt5opengl5t64_5.15.17+dfsg-7+b1 libqt5printsupport5t64_5.15.17+dfsg-7+b1 libqt5sql5t64_5.15.17+dfsg-7+b1 libqt5test5t64_5.15.17+dfsg-7+b1 libqt5widgets5t64_5.15.17+dfsg-7+b1 libqt5xml5t64_5.15.17+dfsg-7+b1 libreadline8t64_8.3-4 librhash1_1.4.6-1.1 librtmp-dev_2.4+20151223.gitfa8646d.1-3+b1 librtmp1_2.4+20151223.gitfa8646d.1-3+b1 libsasl2-2_2.1.28+dfsg1-10 libsasl2-modules-db_2.1.28+dfsg1-10 libseccomp2_2.6.0-2+b1 libselinux1_3.9-4+b1 libsensors-config_1:3.6.2-2 libsensors5_1:3.6.2-2+b1 libsframe3_2.46-3 libsm-dev_2:1.2.6-1+b1 libsm6_2:1.2.6-1+b1 libsmartcols1_2.42-1 libsqlite3-0_3.46.1-9+b1 libssh2-1-dev_1.11.1-2 libssh2-1t64_1.11.1-2 libssl-dev_3.6.1-3 libssl3t64_3.6.1-3 libstdc++-15-dev_15.2.0-16 libstdc++6_16-20260322-1 libsynctex2_2025.20250727.75242+ds-5+b2 libsystemd0_260.1-1 libsz2_1.1.6-1 libtasn1-6_4.21.0-2 libtasn1-6-dev_4.21.0-2 libteckit0_2.5.13+ds-1 libtexlua53-5_2025.20250727.75242+ds-5+b2 libtext-charwidth-perl_0.04-11+b5 libtext-wrapi18n-perl_0.06-10 libtinfo6_6.6+20251231-1 libtool_2.5.4-10 libtsan2_16-20260322-1 libubsan1_16-20260322-1 libuchardet0_0.0.8-2+b1 libudev1_260.1-1 libunbound8_1.24.2-1 libunistring5_1.4.2-1 libuuid1_2.42-1 libuv1t64_1.51.0-2+b1 libvulkan1_1.4.341.0-1 libwacom-common_2.18.0-1 libwacom9_2.18.0-1 libwayland-client0_1.24.0-2+b2 libx11-6_2:1.8.13-1 libx11-data_2:1.8.13-1 libx11-dev_2:1.8.13-1 libx11-xcb1_2:1.8.13-1 libxau-dev_1:1.0.11-1+b1 libxau6_1:1.0.11-1+b1 libxaw7_2:1.0.16-1+b1 libxcb-dri3-0_1.17.0-2+b2 libxcb-glx0_1.17.0-2+b2 libxcb-icccm4_0.4.2-1+b1 libxcb-image0_0.4.0-2+b3 libxcb-keysyms1_0.4.1-1+b1 libxcb-present0_1.17.0-2+b2 libxcb-randr0_1.17.0-2+b2 libxcb-render-util0_0.3.10-1+b1 libxcb-render0_1.17.0-2+b2 libxcb-shape0_1.17.0-2+b2 libxcb-shm0_1.17.0-2+b2 libxcb-sync1_1.17.0-2+b2 libxcb-util1_0.4.1-1+b1 libxcb-xfixes0_1.17.0-2+b2 libxcb-xinerama0_1.17.0-2+b2 libxcb-xinput0_1.17.0-2+b2 libxcb-xkb1_1.17.0-2+b2 libxcb1_1.17.0-2+b2 libxcb1-dev_1.17.0-2+b2 libxdmcp-dev_1:1.1.5-2 libxdmcp6_1:1.1.5-2 libxext-dev_2:1.3.4-1+b4 libxext6_2:1.3.4-1+b4 libxi6_2:1.8.2-2 libxkbcommon-x11-0_1.13.1-1 libxkbcommon0_1.13.1-1 libxml2-16_2.15.2+dfsg-0.1 libxml2-dev_2.15.2+dfsg-0.1 libxmu6_2:1.1.3-4 libxpm4_1:3.5.17-1+b4 libxrender1_1:0.9.12-1+b1 libxshmfence1_1.3.3-1+b1 libxt-dev_1:1.2.1-1.3+b1 libxt6t64_1:1.2.1-1.3+b1 libxxf86vm1_1:1.1.4-2 libxxhash0_0.8.3-2+b1 libz3-4_4.13.3-1+b1 libzstd-dev_1.5.7+dfsg-3+b1 libzstd1_1.5.7+dfsg-3+b1 libzzip-0-13t64_0.13.78+dfsg.1-0.2 linux-libc-dev_6.19.10-1 m4_1.4.21-1 make_4.4.1-3+b1 man-db_2.13.1-1+b1 mawk_1.3.4.20260302-1 media-types_14.0.0 mesa-libgallium_26.0.4-1 ncurses-base_6.6+20251231-1 ncurses-bin_6.6+20251231-1 netbase_6.5 nettle-dev_3.10.2-1 openssl-provider-legacy_3.6.1-3 patch_2.8-2+b1 perl_5.40.1-7 perl-base_5.40.1-7 perl-modules-5.40_5.40.1-7 pkgconf_2.5.1-4 pkgconf-bin_2.5.1-4 po-debconf_1.0.22 procps_2:4.0.4-9+b1 python3_3.13.9-3 python3-all_3.13.9-3 python3-all-dev_3.13.9-3 python3-autocommand_2.2.2-4 python3-dev_3.13.9-3 python3-inflect_7.5.0-1 python3-jaraco.context_6.0.1-2 python3-jaraco.functools_4.1.0-1 python3-jaraco.text_4.0.0-1 python3-minimal_3.13.9-3 python3-more-itertools_10.8.0-1 python3-numpy_1:2.3.5+ds-3 python3-numpy-dev_1:2.3.5+ds-3 python3-opengl_3.1.10+dfsg-1 python3-pkg-resources_78.1.1-0.1 python3-pyqt5_5.15.11+dfsg-3 python3-pyqt5.qtopengl_5.15.11+dfsg-3 python3-pyqt5.sip_12.17.2-1 python3-setuptools_78.1.1-0.1 python3-typeguard_4.4.4-2 python3-typing-extensions_4.15.0-2 python3-zipp_3.23.0-1 python3.13_3.13.12-1 python3.13-dev_3.13.12-1 python3.13-minimal_3.13.12-1 python3.14_3.14.3-5 python3.14-dev_3.14.3-5 python3.14-minimal_3.14.3-5 readline-common_8.3-4 rpcsvc-proto_1.4.3-1+b2 sed_4.9-2+b2 sensible-utils_0.0.26 shared-mime-info_2.4-5+b4 sysvinit-utils_3.18-1 t1utils_1.41-4+b2 tar_1.35+dfsg-4 tex-common_6.20 texlive-base_2025.20260124-1 texlive-binaries_2025.20250727.75242+ds-5+b2 texlive-latex-base_2025.20260124-1 tzdata_2026a-3 ucf_3.0053 util-linux_2.42-1 uuid-dev_2.42-1 x11-common_1:7.7+26 x11proto-dev_2025.1-1 xdg-utils_1.2.1-2 xkb-data_2.47-1 xorg-sgml-doctools_1:1.12.1-1 xtrans-dev_1.6.0-1 xz-utils_5.8.2-2 zlib1g_1:1.3.dfsg+really1.3.2-3 zlib1g-dev_1:1.3.dfsg+really1.3.2-3 +------------------------------------------------------------------------------+ | Build Thu, 09 Apr 2026 20:00:09 +0000 | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: pymol Binary: pymol, python3-pymol, pymol-data Architecture: any all Version: 3.1.0+dfsg-1 Maintainer: Debichem Team Uploaders: Michael Banck Homepage: https://www.pymol.org Standards-Version: 4.7.0 Vcs-Browser: https://salsa.debian.org/debichem-team/pymol Vcs-Git: https://salsa.debian.org/debichem-team/pymol.git Testsuite: autopkgtest Build-Depends: cmake, debhelper-compat (= 13), dh-sequence-python3, freeglut3-dev, libfreetype-dev, libglew-dev, libglm-dev, libnetcdf-dev, libpng-dev, python3-all, python3-all-dev, python3-numpy, python3-opengl, python3-pyqt5, python3-pyqt5.qtopengl, python3-setuptools, texlive-latex-base, libxml2-dev Package-List: pymol deb science optional arch=all pymol-data deb science optional arch=all python3-pymol deb python optional arch=any Checksums-Sha1: 32396cf53f9409123ac32a96aa7fdc524e337bb7 21978280 pymol_3.1.0+dfsg.orig.tar.xz 124b693ee1a4e309066ec2f327837d5c2ab82978 57900 pymol_3.1.0+dfsg-1.debian.tar.xz Checksums-Sha256: dcd6d304e6865a618cab1d053ea470f09abcd716c429248d84de59f947102b1d 21978280 pymol_3.1.0+dfsg.orig.tar.xz 199a7e3227fba659093cda7cfdadca5ebc9dfd8233497d94bd9e30566bb1bb9a 57900 pymol_3.1.0+dfsg-1.debian.tar.xz Files: a2896da7deea2ffbd5c103d7e99f85ed 21978280 pymol_3.1.0+dfsg.orig.tar.xz a8321ad6758639dd10f3bc914b48c02d 57900 pymol_3.1.0+dfsg-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCAAdFiEEnKh3dJ+rLk+paGLs3GhqJ7Q0gbAFAmfX31cACgkQ3GhqJ7Q0 gbAoJg//XLGsbBmaD/gG5utd+whGm+GRPMMa2HGF4jEBJ0joO0rT4SCRZk7mhA8I kQrkPI5G1Pu9XVaDXYcy10kuzbY/WjSmpA8Mk/+K/eT3off/VGxNg4UCdd8IqD4i 7bJPL1IaS78pCBYxMnaFu9+FJTJiMJk5uJS+ykhN2Vp001lwP1Vl4JvUwl2rHrwb 9AMXUa1YHPEWepyaDplXti7UqowzKahADY2hZmU8HKG2DIwWvVV3ywW5L9wpJTe/ JrnasrI6zjfszQ/eP6lbS5hedNJBmS8Kbgn4ATR7iAJIbstR6C3ET0f8V2oYz/lz 9BZ3EjhznAqr2W9nLvFMnXKZaxnS248WIzmJF25F17O2MH+ZfkLqb3cmiUB1uaoj WkxEDq2ALdT4TWDZIJozx81wSTcz3EdKbItChAQqn4f6duOzQfFAMKDGP4hmUFaS jLvoQQy24ykux5sVYcrrXWFT7yeQ1a3Jey0GmCKcSzym4kAqb9EZTBd7Uud8GEv3 aANO8k0Ag+Ijyx7346HU+kbh0PIv6TaDxDlB7N5JKq67heDDrnlRAyaTyDA+SbYY 1oT0TadmhWp1wByXzW5y2waoLgxT+OGBScqhxaWeoUnCCC7SLsqWowHTGR3A0KOG +CyitccyMiDGBdSJ9L1YRzexjemb3BFouV+dcseIT7g0zaBld0w= =bZLD -----END PGP SIGNATURE----- dpkg-source: warning: cannot verify inline signature for ./pymol_3.1.0+dfsg-1.dsc: missing OpenPGP keyrings dpkg-source: info: verifying ./pymol_3.1.0+dfsg-1.dsc dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-keyring.pgp dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-tag2upload.pgp dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-nonupload.pgp dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-maintainers.pgp dpkg-source: info: extracting pymol in /build/reproducible-path/pymol-3.1.0+dfsg dpkg-source: info: unpacking pymol_3.1.0+dfsg.orig.tar.xz dpkg-source: info: unpacking pymol_3.1.0+dfsg-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 03_povray.patch dpkg-source: info: applying 22_fix_pymol_import.patch dpkg-source: info: applying 27_fix_pymol_path_in_setup.patch dpkg-source: info: applying 28_no_data_install_in_python_path.patch dpkg-source: info: applying 31_fix_format-security.patch dpkg-source: info: applying 32_fix_spelling_lintian_warnings.patch dpkg-source: info: applying 33_fix_relative_paths_in_example_scripts.patch dpkg-source: info: applying 34_fix_examples_add_fetch_instead_of_load.patch dpkg-source: info: applying 40_mstop_movies.patch Check disk space ---------------- Sufficient free space for build Hack binNMU version ------------------- Created changelog entry for binNMU version 3.1.0+dfsg-1+b3 User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=8 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LC_COLLATE=C.UTF-8 LC_CTYPE=C.UTF-8 LOGNAME=sbuild PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SHELL=/bin/sh SOURCE_DATE_EPOCH=1775243829 USER=sbuild dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -us -uc -B dpkg-buildpackage: info: source package pymol dpkg-buildpackage: info: source version 3.1.0+dfsg-1+b3 dpkg-buildpackage: info: source distribution sid dpkg-buildpackage: info: source changed by arm Build Daemon (arm-ubc-03) dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean --buildsystem pybuild dh_auto_clean -O--buildsystem=pybuild I: pybuild base:385: python3.14 setup.py clean /usr/lib/python3/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated !! ******************************************************************************** Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). This deprecation is overdue, please update your project and remove deprecated calls to avoid build errors in the future. See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! corresp(dist, value, root_dir) running clean removing '/build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build' (and everything under it) 'build/bdist.linux-aarch64' does not exist -- can't clean it 'build/scripts-3.14' does not exist -- can't clean it I: pybuild base:385: python3.13 setup.py clean /usr/lib/python3/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated !! ******************************************************************************** Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). This deprecation is overdue, please update your project and remove deprecated calls to avoid build errors in the future. See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! corresp(dist, value, root_dir) running clean removing '/build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build' (and everything under it) 'build/bdist.linux-aarch64' does not exist -- can't clean it 'build/scripts-3.13' does not exist -- can't clean it dh_autoreconf_clean -O--buildsystem=pybuild debian/rules override_dh_clean make[1]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg' rm -f -r build test/tmp test/cmp generated dh_clean debian/pymol-ref-card.* \ Rules.make create_shadertext.pyc make[1]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg' debian/rules binary-arch dh binary-arch --buildsystem pybuild dh_update_autotools_config -a -O--buildsystem=pybuild dh_autoreconf -a -O--buildsystem=pybuild dh_auto_configure -a -O--buildsystem=pybuild I: pybuild base:385: python3.14 setup.py config /usr/lib/python3/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated !! ******************************************************************************** Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). This deprecation is overdue, please update your project and remove deprecated calls to avoid build errors in the future. See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! corresp(dist, value, root_dir) running config I: pybuild base:385: python3.13 setup.py config /usr/lib/python3/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated !! ******************************************************************************** Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). This deprecation is overdue, please update your project and remove deprecated calls to avoid build errors in the future. See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! corresp(dist, value, root_dir) running config dh_auto_build -a -O--buildsystem=pybuild I: pybuild base:385: /usr/bin/python3.14 setup.py build /usr/lib/python3/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated !! ******************************************************************************** Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). This deprecation is overdue, please update your project and remove deprecated calls to avoid build errors in the future. See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! corresp(dist, value, root_dir) running build running build_py creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/morphing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/computing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/seqalign.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/keyboard.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/shortcut.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/util.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/xwin.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/wizarding.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/diagnosing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/helping.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/povray.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/controlling.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/fitting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/preset.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/checking.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/querying.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/callback.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/parsing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/moving.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/editor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/shortcut_dict.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/internal.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/selector.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/viewing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/save_shortcut.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/completing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/selecting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/keywords.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/cgo.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/headering.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/movie.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/colorramping.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/cmd.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/invocation.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/colorprinting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/api.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/menu.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/editing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/rpc.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/cgobuilder.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/experimenting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/parser.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/mpeg_encode.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/__main__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/creating.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/setting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/shortcut_manager.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/_gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/locking.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/exporting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/constants.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/xray.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/externing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/lazyio.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/monitoring.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/pymolhttpd.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/feedingback.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/constants_palette.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/importing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/commanding.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/vfont.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol2 copying modules/pymol2/cmd2.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol2 copying modules/pymol2/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol2 creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt copying modules/pmg_qt/file_dialogs.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt copying modules/pmg_qt/shortcut_menu_gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt copying modules/pmg_qt/advanced_settings_gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt copying modules/pmg_qt/scene_bin_gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt copying modules/pmg_qt/pymol_gl_widget.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt copying modules/pmg_qt/volume.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt copying modules/pmg_qt/properties_dialog.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt copying modules/pmg_qt/builder.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt copying modules/pmg_qt/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt copying modules/pmg_qt/mimic_pmg_tk.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt copying modules/pmg_qt/mimic_tk.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt copying modules/pmg_qt/keymapping.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt copying modules/pmg_qt/TextEditor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt copying modules/pmg_qt/pymol_qt_gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk copying modules/pmg_tk/SetEditor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk copying modules/pmg_tk/PMGApp.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk copying modules/pmg_tk/volume.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk copying modules/pmg_tk/PyMOLMapLoad.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk copying modules/pmg_tk/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk copying modules/pmg_tk/ColorEditor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk copying modules/pmg_tk/TextEditor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk copying modules/pmg_tk/Setting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk copying modules/pmg_tk/Demo.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/place.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/bond_mmff.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/protein_residues.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/charge.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/mae.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/protein_amber99.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/water_residues.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/xyz.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/arc.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/pkl.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/gms.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/io.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/dictdb.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/lst.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/cif.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/mass.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/protein_amber.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/sdf.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/models.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/map.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/cc1.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/gamess1.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/bonds.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/water_amber.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/pdb.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/cpv.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/mol2.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/mol.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/brick.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/hetatm.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/bond_amber.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/solvate.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/neighbor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/mmd.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/protein.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/protein_mmff.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard copying modules/pymol/wizard/sculpting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard copying modules/pymol/wizard/filter.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard copying modules/pymol/wizard/dragging.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard copying modules/pymol/wizard/nucmutagenesis.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard copying modules/pymol/wizard/charge.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard copying modules/pymol/wizard/distance.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard copying modules/pymol/wizard/command.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard copying modules/pymol/wizard/toggle.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard copying modules/pymol/wizard/message.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard copying modules/pymol/wizard/label.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard copying modules/pymol/wizard/cleanup.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard copying modules/pymol/wizard/density.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard copying modules/pymol/wizard/pair_fit.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard copying modules/pymol/wizard/benchmark.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard copying modules/pymol/wizard/box.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard copying modules/pymol/wizard/annotation.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard copying modules/pymol/wizard/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard copying modules/pymol/wizard/renaming.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard copying modules/pymol/wizard/measurement.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard copying modules/pymol/wizard/mutagenesis.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard copying modules/pymol/wizard/pseudoatom.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard copying modules/pymol/wizard/appearance.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard copying modules/pymol/wizard/openvr.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard copying modules/pymol/wizard/stereodemo.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard copying modules/pymol/wizard/demo.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard copying modules/pymol/wizard/security.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/plugins copying modules/pymol/plugins/repository.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/plugins copying modules/pymol/plugins/installation.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/plugins copying modules/pymol/plugins/legacysupport.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/plugins copying modules/pymol/plugins/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/plugins copying modules/pymol/plugins/managergui_qt.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/plugins copying modules/pymol/plugins/managergui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/plugins creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/Qt copying modules/pymol/Qt/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/Qt copying modules/pymol/Qt/utils.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/Qt creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/stereochemistry copying modules/pymol/stereochemistry/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/stereochemistry creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/syntax copying modules/pmg_qt/syntax/pmlparser.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/syntax copying modules/pmg_qt/syntax/python.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/syntax copying modules/pmg_qt/syntax/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/syntax copying modules/pmg_qt/syntax/pml.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/syntax creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/web/examples copying modules/web/examples/justhttpd.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/web/examples copying modules/web/examples/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/web/examples creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk/skins copying modules/pmg_tk/skins/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk/skins creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk/startup copying modules/pmg_tk/startup/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk/startup creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk/skins/normal copying modules/pmg_tk/skins/normal/ModalWindow.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk/skins/normal copying modules/pmg_tk/skins/normal/builder.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk/skins/normal copying modules/pmg_tk/skins/normal/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk/skins/normal creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk/skins/demo copying modules/pmg_tk/skins/demo/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk/skins/demo creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/fast copying modules/chempy/fast/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/fast creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/bmin copying modules/chempy/bmin/util.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/bmin copying modules/chempy/bmin/state.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/bmin copying modules/chempy/bmin/realtime.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/bmin copying modules/chempy/bmin/commands.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/bmin copying modules/chempy/bmin/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/bmin creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/tinker copying modules/chempy/tinker/amber.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/tinker copying modules/chempy/tinker/state.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/tinker copying modules/chempy/tinker/realtime.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/tinker copying modules/chempy/tinker/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/tinker copying modules/chempy/tinker/keyword.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/tinker creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/mmtf copying modules/chempy/mmtf/io.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/mmtf copying modules/chempy/mmtf/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/mmtf creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/champ copying modules/chempy/champ/assign.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/champ copying modules/chempy/champ/amber99.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/champ copying modules/chempy/champ/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/champ copying modules/chempy/champ/formal_charges.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/champ creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/fragments copying modules/chempy/fragments/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/fragments running egg_info creating modules/pymol.egg-info writing modules/pymol.egg-info/PKG-INFO /usr/lib/python3/dist-packages/setuptools/_core_metadata.py:163: SetuptoolsDeprecationWarning: Invalid config. !! ******************************************************************************** newlines are not allowed in `summary` and will break in the future ******************************************************************************** !! write_field('Summary', single_line(summary)) writing dependency_links to modules/pymol.egg-info/dependency_links.txt writing entry points to modules/pymol.egg-info/entry_points.txt writing requirements to modules/pymol.egg-info/requires.txt writing top-level names to modules/pymol.egg-info/top_level.txt writing manifest file 'modules/pymol.egg-info/SOURCES.txt' reading manifest file 'modules/pymol.egg-info/SOURCES.txt' adding license file 'LICENSE' adding license file 'AUTHORS' writing manifest file 'modules/pymol.egg-info/SOURCES.txt' copying modules/pmg_qt/forms/render.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/save_object.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/create_shortcut.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/change_confirm.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/load_aln.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/load_traj.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/png.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/load_map.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/shortcut_menu.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/colors.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/pluginitem.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/props.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/askpartial.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/fetch.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/load_mae.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/load_mtz.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/save_molecule.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/pluginmanager.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/movieexport.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/help_shortcut.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms running build_ext cmake /build/reproducible-path/pymol-3.1.0+dfsg -DTARGET_NAME=_cmd -DCMAKE_LIBRARY_OUTPUT_DIRECTORY=/build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol -DCMAKE_BUILD_TYPE=Release -DALL_INC_DIR=include;contrib/uiuc/plugins/include;ov/src;layer0;layer1;layer2;layer3;layer4;layer5;build/generated;contrib/uiuc/plugins/molfile_plugin/src;/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include;/usr/include;/usr/include/freetype2;/usr/include/libxml2;/usr/include/python3.14;/usr/include/python3.14; -DALL_SRC=build/generated/ShaderText.cpp;contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c;contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c;contrib/uiuc/plugins/molfile_plugin/src/avsplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.c;contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c;contrib/uiuc/plugins/molfile_plugin/src/biomoccaplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/carplugin.c;contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/corplugin.c;contrib/uiuc/plugins/molfile_plugin/src/crdplugin.c;contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c;contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c;contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/dxplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c;contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/grdplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/hash.c;contrib/uiuc/plugins/molfile_plugin/src/inthash.c;contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c;contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/mapplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c;contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c;contrib/uiuc/plugins/molfile_plugin/src/netcdfplugin.c;contrib/uiuc/plugins/molfile_plugin/src/offplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c;contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c;contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c;contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c;contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c;contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c;layer0/Bezier.cpp;layer0/Block.cpp;layer0/CarveHelper.cpp;layer0/ContourSurf.cpp;layer0/Crystal.cpp;layer0/Err.cpp;layer0/Feedback.cpp;layer0/Field.cpp;layer0/File.cpp;layer0/GFXManager.cpp;layer0/GenericBuffer.cpp;layer0/GraphicsUtil.cpp;layer0/Isosurf.cpp;layer0/Map.cpp;layer0/Match.cpp;layer0/Matrix.cpp;layer0/MemoryDebug.cpp;layer0/MemoryUsage.cpp;layer0/MyPNG.cpp;layer0/Parse.cpp;layer0/Pixmap.cpp;layer0/PostProcess.cpp;layer0/PrintUtils.cpp;layer0/ShaderMgr.cpp;layer0/ShaderPreprocessor.cpp;layer0/ShaderPrg.cpp;layer0/Sphere.cpp;layer0/TTT.cpp;layer0/Tetsurf.cpp;layer0/Texture.cpp;layer0/Tracker.cpp;layer0/Triangle.cpp;layer0/Util.cpp;layer0/Util2.cpp;layer0/Vector.cpp;layer0/Word.cpp;layer0/ccealignmodule.cpp;layer0/marching_cubes.cpp;layer0/os_gl.cpp;layer1/Basis.cpp;layer1/ButMode.cpp;layer1/CGO.cpp;layer1/CGOGL.cpp;layer1/CGORenderer.cpp;layer1/COLLADA.cpp;layer1/Camera.cpp;layer1/Character.cpp;layer1/Color.cpp;layer1/Control.cpp;layer1/Extrude.cpp;layer1/Font.cpp;layer1/FontGLUT.cpp;layer1/FontGLUT8x13.cpp;layer1/FontGLUT9x15.cpp;layer1/FontGLUTHel10.cpp;layer1/FontGLUTHel12.cpp;layer1/FontGLUTHel18.cpp;layer1/FontType.cpp;layer1/ImageUtils.cpp;layer1/Movie.cpp;layer1/Ortho.cpp;layer1/P.cpp;layer1/PConv.cpp;layer1/Picking.cpp;layer1/Pop.cpp;layer1/PyMOLObject.cpp;layer1/Ray.cpp;layer1/Rep.cpp;layer1/Scene.cpp;layer1/SceneMouse.cpp;layer1/ScenePicking.cpp;layer1/SceneRay.cpp;layer1/SceneRender.cpp;layer1/SceneView.cpp;layer1/ScrollBar.cpp;layer1/Seq.cpp;layer1/Setting.cpp;layer1/Shaker.cpp;layer1/SymOp.cpp;layer1/SymOpPConv.cpp;layer1/SymOpTools.cpp;layer1/Symmetry.cpp;layer1/Text.cpp;layer1/TypeFace.cpp;layer1/View.cpp;layer1/Wizard.cpp;layer2/AssemblyHelpers.cpp;layer2/AtomInfo.cpp;layer2/AtomInfoHistory.cpp;layer2/BondTypeHistory.cpp;layer2/CifFile.cpp;layer2/CifMoleculeReader.cpp;layer2/CoordSet.cpp;layer2/DistSet.cpp;layer2/GadgetSet.cpp;layer2/HydrogenAdder.cpp;layer2/MmodTyping.cpp;layer2/MmtfMoleculeReader.cpp;layer2/Mol2Typing.cpp;layer2/MolV3000.cpp;layer2/ObjectAlignment.cpp;layer2/ObjectCGO.cpp;layer2/ObjectCallback.cpp;layer2/ObjectCurve.cpp;layer2/ObjectDist.cpp;layer2/ObjectGadget.cpp;layer2/ObjectGadgetRamp.cpp;layer2/ObjectGroup.cpp;layer2/ObjectMap.cpp;layer2/ObjectMesh.cpp;layer2/ObjectMolecule.cpp;layer2/ObjectMolecule2.cpp;layer2/ObjectMolecule3.cpp;layer2/ObjectSlice.cpp;layer2/ObjectSurface.cpp;layer2/ObjectVolume.cpp;layer2/RepAngle.cpp;layer2/RepCartoon.cpp;layer2/RepCylBond.cpp;layer2/RepDihedral.cpp;layer2/RepDistDash.cpp;layer2/RepDistLabel.cpp;layer2/RepDot.cpp;layer2/RepEllipsoid.cpp;layer2/RepLabel.cpp;layer2/RepMesh.cpp;layer2/RepNonbonded.cpp;layer2/RepNonbondedSphere.cpp;layer2/RepRibbon.cpp;layer2/RepSphere.cpp;layer2/RepSphereGenerate.cpp;layer2/RepSphereImmediate.cpp;layer2/RepSurface.cpp;layer2/RepWireBond.cpp;layer2/Sculpt.cpp;layer2/SculptCache.cpp;layer2/SideChainHelper.cpp;layer2/VFont.cpp;layer3/AtomIterators.cpp;layer3/CifDataValueFormatter.cpp;layer3/Editor.cpp;layer3/Executive.cpp;layer3/ExecutivePython.cpp;layer3/Interactions.cpp;layer3/MaeExportHelpers.cpp;layer3/MoleculeExporter.cpp;layer3/MovieScene.cpp;layer3/PlugIOManager.cpp;layer3/RingFinder.cpp;layer3/Seeker.cpp;layer3/Selector.cpp;layer3/SelectorTmp.cpp;layer3/SpecRec.cpp;layer3/SpecRecSpecial.cpp;layer4/Cmd.cpp;layer4/Menu.cpp;layer4/PopUp.cpp;layer5/PyMOL.cpp;layer5/TestPyMOL.cpp;layer5/main.cpp;ov/src/OVContext.cpp;ov/src/OVHeap.cpp;ov/src/OVHeapArray.cpp;ov/src/OVLexicon.cpp;ov/src/OVOneToAny.cpp;ov/src/OVOneToOne.cpp;ov/src/OVRandom.cpp;ov/src/ov_utility.cpp; -DALL_DEF=_PYMOL_LIBPNG;_PYMOL_FREETYPE;PYMOL_OPENMP;_PYMOL_VMD_PLUGINS;_HAVE_LIBXML;_PYMOL_NO_MSGPACKC;_PYMOL_NO_MAIN;_PYMOL_NUMPY; -DALL_LIB_DIR=/usr/lib; -DALL_LIB=png;freetype;xml2;GL;GLEW;netcdf; -DALL_COMP_ARGS=-Werror=return-type;-Wunused-variable;-Wno-switch;-Wno-narrowing;-Wno-char-subscripts;-O3;-fopenmp; -DALL_EXT_LINK=-fopenmp -DSHARED_SUFFIX=.cpython-314-aarch64-linux-gnu.so -- The C compiler identification is GNU 15.2.0 -- The CXX compiler identification is GNU 15.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Configuring done (1.0s) -- Generating done (0.1s) -- Build files have been written to: /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd cmake --build . --config Release -j12 gmake[1]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd' /usr/bin/cmake -S/build/reproducible-path/pymol-3.1.0+dfsg -B/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd/CMakeFiles /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[2]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd' /usr/bin/gmake -f CMakeFiles/_cmd.dir/build.make CMakeFiles/_cmd.dir/depend gmake[3]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd' cd /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/pymol-3.1.0+dfsg /build/reproducible-path/pymol-3.1.0+dfsg /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd/CMakeFiles/_cmd.dir/DependInfo.cmake "--color=" _cmd gmake[3]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd' /usr/bin/gmake -f CMakeFiles/_cmd.dir/build.make CMakeFiles/_cmd.dir/build gmake[3]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd' [ 0%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/avsplugin.cpp.o [ 0%] Building CXX object CMakeFiles/_cmd.dir/build/generated/ShaderText.cpp.o [ 1%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.c.o [ 1%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/avsplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/avsplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/avsplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/avsplugin.cpp /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.c [ 2%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c.o [ 2%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/biomoccaplugin.cpp.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/biomoccaplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/biomoccaplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/biomoccaplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/biomoccaplugin.cpp [ 3%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/build/generated/ShaderText.cpp.o -MF CMakeFiles/_cmd.dir/build/generated/ShaderText.cpp.o.d -o CMakeFiles/_cmd.dir/build/generated/ShaderText.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/build/generated/ShaderText.cpp [ 3%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp.o [ 4%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/carplugin.c.o [ 4%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp.o [ 4%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/carplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/carplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/carplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/carplugin.c /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp [ 5%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/corplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/corplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/corplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/corplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/corplugin.c [ 5%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/crdplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/crdplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/crdplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/crdplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/crdplugin.c [ 5%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp [ 6%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c [ 6%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c [ 7%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp [ 7%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp [ 8%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dxplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dxplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dxplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dxplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dxplugin.cpp [ 8%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp [ 8%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp [ 9%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c [ 9%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp [ 10%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/grdplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/grdplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/grdplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/grdplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/grdplugin.cpp [ 10%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp [ 10%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp [ 11%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/hash.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/hash.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/hash.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/hash.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/hash.c [ 11%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/inthash.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/inthash.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/inthash.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/inthash.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/inthash.c [ 12%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c [ 12%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp [ 13%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/mapplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/mapplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/mapplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/mapplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/mapplugin.cpp [ 13%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp [ 13%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp [ 14%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c [ 14%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp [ 15%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.cpp [ 15%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c [ 16%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/netcdfplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/netcdfplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/netcdfplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/netcdfplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/netcdfplugin.c [ 16%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/offplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/offplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/offplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/offplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/offplugin.cpp [ 16%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp [ 17%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp [ 17%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp: In function ‘int {anonymous}::write_structure(void*, int, const molfile_atom_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp:1904:9: warning: unused variable ‘last_ctnumber’ [-Wunused-variable] 1904 | int last_ctnumber = -1; | ^~~~~~~~~~~~~ [ 18%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c [ 18%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp.o [ 18%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp: In function ‘int getUniqueResID(char*, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:443:7: warning: unused variable ‘i’ [-Wunused-variable] 443 | int i, uid; | ^ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp: In function ‘int parseStructureFaster(molfile_atom_t*, int*, pdbxParser*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:484:47: warning: unused variable ‘j’ [-Wunused-variable] 484 | int i, count, atomdata, pos, idx, xyzcount, j; | ^ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:503:8: warning: unused variable ‘oldChain’ [-Wunused-variable] 503 | char oldChain[8]; | ^~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp: In function ‘bool readAngleBonds(molfile_atom_t*, pdbxParser*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:803:7: warning: unused variable ‘bondTable’ [-Wunused-variable] 803 | int bondTable[32]; | ^~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:807:15: warning: unused variable ‘j’ [-Wunused-variable] 807 | int i, pos, j, k; | ^ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:811:8: warning: unused variable ‘modelNum’ [-Wunused-variable] 811 | char modelNum[8]; | ^~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:822:20: warning: unused variable ‘atom’ [-Wunused-variable] 822 | molfile_atom_t * atom; | ^~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:884:7: warning: unused variable ‘test’ [-Wunused-variable] 884 | int test = parser->nbonds + bnum; | ^~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp: In function ‘bool readRMSDBonds(molfile_atom_t*, pdbxParser*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:984:7: warning: unused variable ‘bondTable’ [-Wunused-variable] 984 | int bondTable[32]; | ^~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:988:15: warning: unused variable ‘j’ [-Wunused-variable] 988 | int i, pos, j, k; | ^ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:991:8: warning: unused variable ‘modelNum’ [-Wunused-variable] 991 | char modelNum[8]; | ^~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:1002:20: warning: unused variable ‘atom’ [-Wunused-variable] 1002 | molfile_atom_t * atom; | ^~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp: In function ‘void* open_file_write(const char*, const char*, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:1409:9: warning: unused variable ‘fd’ [-Wunused-variable] 1409 | FILE* fd; | ^~ [ 19%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp [ 19%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp [ 20%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c In file included from /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp:30: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/ply_c.h: In function ‘void put_element_ply(PlyFile*, void*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:459:7: warning: unused variable ‘i’ [-Wunused-variable] 459 | int i,j,k; | ^ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/ply_c.h: In function ‘void ascii_get_element(PlyFile*, char*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1407:7: warning: unused variable ‘i’ [-Wunused-variable] 1407 | int i,j,k; | ^ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/ply_c.h: In function ‘void binary_get_element(PlyFile*, char*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1541:7: warning: unused variable ‘i’ [-Wunused-variable] 1541 | int i,j,k; | ^ [ 20%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c [ 21%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.cpp /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/ply_c.h: In function ‘char* recreate_command_line(int, char**)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1334:11: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 1334 | line[0] = '\0'; | ~~~~~~~~^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1333:26: note: destination object of size 0 allocated by ‘malloc’ 1333 | line = (char *) malloc (sizeof(char) * len); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~ [ 21%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c [ 21%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp [ 22%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp [ 22%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp [ 23%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c [ 23%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp [ 24%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c [ 24%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c [ 24%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c [ 25%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c [ 25%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c [ 26%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c [ 26%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c [ 27%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c [ 27%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp [ 27%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp [ 28%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp [ 28%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c [ 29%] Building CXX object CMakeFiles/_cmd.dir/layer0/Bezier.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Bezier.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Bezier.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Bezier.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Bezier.cpp [ 29%] Building CXX object CMakeFiles/_cmd.dir/layer0/Block.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Block.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Block.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Block.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Block.cpp [ 29%] Building CXX object CMakeFiles/_cmd.dir/layer0/CarveHelper.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/CarveHelper.cpp.o -MF CMakeFiles/_cmd.dir/layer0/CarveHelper.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/CarveHelper.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/CarveHelper.cpp [ 30%] Building CXX object CMakeFiles/_cmd.dir/layer0/ContourSurf.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/ContourSurf.cpp.o -MF CMakeFiles/_cmd.dir/layer0/ContourSurf.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/ContourSurf.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/ContourSurf.cpp /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c: In function ‘vtf_read_bonds’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c:147:48: warning: ‘%s’ directive argument is null [-Wformat-overflow=] 147 | sprintf(message, "vtfplugin:%d: error: %s: \"%s\"\n", | ^~ [ 30%] Building CXX object CMakeFiles/_cmd.dir/layer0/Crystal.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Crystal.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Crystal.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Crystal.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Crystal.cpp [ 31%] Building CXX object CMakeFiles/_cmd.dir/layer0/Err.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Err.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Err.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Err.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Err.cpp [ 31%] Building CXX object CMakeFiles/_cmd.dir/layer0/Feedback.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Feedback.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Feedback.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Feedback.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.cpp [ 32%] Building CXX object CMakeFiles/_cmd.dir/layer0/Field.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Field.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Field.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Field.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Field.cpp [ 32%] Building CXX object CMakeFiles/_cmd.dir/layer0/File.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/File.cpp.o -MF CMakeFiles/_cmd.dir/layer0/File.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/File.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/File.cpp [ 32%] Building CXX object CMakeFiles/_cmd.dir/layer0/GFXManager.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/GFXManager.cpp.o -MF CMakeFiles/_cmd.dir/layer0/GFXManager.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/GFXManager.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/GFXManager.cpp [ 33%] Building CXX object CMakeFiles/_cmd.dir/layer0/GenericBuffer.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/GenericBuffer.cpp.o -MF CMakeFiles/_cmd.dir/layer0/GenericBuffer.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/GenericBuffer.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/GenericBuffer.cpp /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘std::string framefile(const std::string&, size_t, size_t, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:675:35: warning: ‘sprintf’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 675 | sprintf(answer, "%03x/", d1); | ^ In function ‘std::string DDreldir(const std::string&, int, int)’, inlined from ‘std::string framefile(const std::string&, size_t, size_t, int, int)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:779:23: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:675:20: note: ‘sprintf’ output between 5 and 10 bytes into a destination of size 9 675 | sprintf(answer, "%03x/", d1); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘std::string framefile(const std::string&, size_t, size_t, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:673:35: warning: ‘%03x’ directive writing between 3 and 8 bytes into a region of size between 0 and 5 [-Wformat-overflow=] 673 | sprintf(answer, "%03x/%03x/", d1, d2); | ^~~~ In function ‘std::string DDreldir(const std::string&, int, int)’, inlined from ‘std::string framefile(const std::string&, size_t, size_t, int, int)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:779:23: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:673:29: note: directive argument in the range [0, 2147483646] 673 | sprintf(answer, "%03x/%03x/", d1, d2); | ^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:673:20: note: ‘sprintf’ output between 9 and 19 bytes into a destination of size 9 673 | sprintf(answer, "%03x/%03x/", d1, d2); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 33%] Building CXX object CMakeFiles/_cmd.dir/layer0/GraphicsUtil.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/GraphicsUtil.cpp.o -MF CMakeFiles/_cmd.dir/layer0/GraphicsUtil.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/GraphicsUtil.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/GraphicsUtil.cpp /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘void DDmkdir(const std::string&, mode_t, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:714:23: warning: ‘%03x’ directive writing between 3 and 8 bytes into a region of size 6 [-Wformat-overflow=] 714 | sprintf(sub, "%03x/", i); | ^~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:714:22: note: directive argument in the range [0, 2147483646] 714 | sprintf(sub, "%03x/", i); | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:714:16: note: ‘sprintf’ output between 5 and 10 bytes into a destination of size 6 714 | sprintf(sub, "%03x/", i); | ~~~~~~~^~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:722:30: warning: ‘%03x’ directive writing between 3 and 8 bytes into a region of size 6 [-Wformat-overflow=] 722 | sprintf(subsub, "%03x", j); | ^~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:722:29: note: directive argument in the range [0, 2147483646] 722 | sprintf(subsub, "%03x", j); | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:722:20: note: ‘sprintf’ output between 4 and 9 bytes into a destination of size 6 722 | sprintf(subsub, "%03x", j); | ~~~~~~~^~~~~~~~~~~~~~~~~~~ [ 34%] Building CXX object CMakeFiles/_cmd.dir/layer0/Isosurf.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Isosurf.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Isosurf.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Isosurf.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Isosurf.cpp [ 34%] Building CXX object CMakeFiles/_cmd.dir/layer0/Map.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Map.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Map.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Map.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Map.cpp [ 35%] Building CXX object CMakeFiles/_cmd.dir/layer0/Match.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Match.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Match.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Match.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Match.cpp [ 35%] Building CXX object CMakeFiles/_cmd.dir/layer0/Matrix.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Matrix.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Matrix.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Matrix.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Matrix.cpp [ 35%] Building CXX object CMakeFiles/_cmd.dir/layer0/MemoryDebug.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/MemoryDebug.cpp.o -MF CMakeFiles/_cmd.dir/layer0/MemoryDebug.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/MemoryDebug.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/MemoryDebug.cpp [ 36%] Building CXX object CMakeFiles/_cmd.dir/layer0/MemoryUsage.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/MemoryUsage.cpp.o -MF CMakeFiles/_cmd.dir/layer0/MemoryUsage.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/MemoryUsage.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/MemoryUsage.cpp [ 36%] Building CXX object CMakeFiles/_cmd.dir/layer0/MyPNG.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/MyPNG.cpp.o -MF CMakeFiles/_cmd.dir/layer0/MyPNG.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/MyPNG.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/MyPNG.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer0/MemoryUsage.cpp: In function ‘size_t pymol::memory_usage()’: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/MemoryUsage.cpp:38:21: warning: use of assignment suppression and length modifier together in gnu_scanf format [-Wformat=] 38 | std::fscanf(fp, "%*zu%zu", &vmRSS); | ^~~~~~~~~ [ 37%] Building CXX object CMakeFiles/_cmd.dir/layer0/Parse.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Parse.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Parse.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Parse.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Parse.cpp [ 37%] Building CXX object CMakeFiles/_cmd.dir/layer0/PostProcess.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/PostProcess.cpp.o -MF CMakeFiles/_cmd.dir/layer0/PostProcess.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/PostProcess.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/PostProcess.cpp [ 37%] Building CXX object CMakeFiles/_cmd.dir/layer0/Pixmap.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Pixmap.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Pixmap.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Pixmap.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Pixmap.cpp [ 38%] Building CXX object CMakeFiles/_cmd.dir/layer0/PrintUtils.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/PrintUtils.cpp.o -MF CMakeFiles/_cmd.dir/layer0/PrintUtils.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/PrintUtils.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/PrintUtils.cpp [ 38%] Building CXX object CMakeFiles/_cmd.dir/layer0/ShaderMgr.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/ShaderMgr.cpp.o -MF CMakeFiles/_cmd.dir/layer0/ShaderMgr.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/ShaderMgr.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/ShaderMgr.cpp [ 39%] Building CXX object CMakeFiles/_cmd.dir/layer0/ShaderPreprocessor.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/ShaderPreprocessor.cpp.o -MF CMakeFiles/_cmd.dir/layer0/ShaderPreprocessor.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/ShaderPreprocessor.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/ShaderPreprocessor.cpp [ 39%] Building CXX object CMakeFiles/_cmd.dir/layer0/ShaderPrg.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/ShaderPrg.cpp.o -MF CMakeFiles/_cmd.dir/layer0/ShaderPrg.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/ShaderPrg.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/ShaderPrg.cpp In file included from /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:71: In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1497:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 4 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: destination object ‘nx’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1497:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: at offset [8, 12] into destination object ‘nx’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1497:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: at offset [16, 20] into destination object ‘nx’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1497:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: at offset [24, 28] into destination object ‘nx’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1497:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: at offset [32, 36] into destination object ‘nx’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1497:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: at offset [40, 44] into destination object ‘nx’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1497:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: at offset [48, 52] into destination object ‘nx’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1498:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 4 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: destination object ‘ny’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1498:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: at offset [8, 12] into destination object ‘ny’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1498:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: at offset [16, 20] into destination object ‘ny’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1498:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: at offset [24, 28] into destination object ‘ny’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1498:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: at offset [32, 36] into destination object ‘ny’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1498:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: at offset [40, 44] into destination object ‘ny’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1498:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: at offset [48, 52] into destination object ‘ny’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1499:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 4 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: destination object ‘nz’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1499:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: at offset [8, 12] into destination object ‘nz’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1499:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: at offset [16, 20] into destination object ‘nz’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1499:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: at offset [24, 28] into destination object ‘nz’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1499:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: at offset [32, 36] into destination object ‘nz’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1499:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: at offset [40, 44] into destination object ‘nz’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1499:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: at offset [48, 52] into destination object ‘nz’ of size 4 1494 | int32_t nx, ny, nz; | ^~ [ 40%] Building CXX object CMakeFiles/_cmd.dir/layer0/Sphere.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Sphere.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Sphere.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Sphere.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Sphere.cpp [ 40%] Building CXX object CMakeFiles/_cmd.dir/layer0/TTT.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/TTT.cpp.o -MF CMakeFiles/_cmd.dir/layer0/TTT.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/TTT.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/TTT.cpp [ 40%] Building CXX object CMakeFiles/_cmd.dir/layer0/Tetsurf.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Tetsurf.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Tetsurf.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Tetsurf.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Tetsurf.cpp [ 41%] Building CXX object CMakeFiles/_cmd.dir/layer0/Texture.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Texture.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Texture.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Texture.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Texture.cpp [ 41%] Building CXX object CMakeFiles/_cmd.dir/layer0/Tracker.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Tracker.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Tracker.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Tracker.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Tracker.cpp [ 42%] Building CXX object CMakeFiles/_cmd.dir/layer0/Triangle.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Triangle.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Triangle.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Triangle.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Triangle.cpp In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_wrapped_v1({anonymous}::BlobMap&, uint32_t, bool, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1552:26, inlined from ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1751:29: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 4 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In member function ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1548:21: note: destination object ‘nz’ of size 4 1548 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_wrapped_v1({anonymous}::BlobMap&, uint32_t, bool, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1552:26, inlined from ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1751:29: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In member function ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1548:21: note: at offset [8, 12] into destination object ‘nz’ of size 4 1548 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_wrapped_v1({anonymous}::BlobMap&, uint32_t, bool, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1552:26, inlined from ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1751:29: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In member function ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1548:21: note: at offset [16, 20] into destination object ‘nz’ of size 4 1548 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_wrapped_v1({anonymous}::BlobMap&, uint32_t, bool, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1552:26, inlined from ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1751:29: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In member function ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1548:21: note: at offset [24, 28] into destination object ‘nz’ of size 4 1548 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_wrapped_v1({anonymous}::BlobMap&, uint32_t, bool, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1552:26, inlined from ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1751:29: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In member function ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1548:21: note: at offset [32, 36] into destination object ‘nz’ of size 4 1548 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_wrapped_v1({anonymous}::BlobMap&, uint32_t, bool, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1552:26, inlined from ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1751:29: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In member function ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1548:21: note: at offset [40, 44] into destination object ‘nz’ of size 4 1548 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_wrapped_v1({anonymous}::BlobMap&, uint32_t, bool, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1552:26, inlined from ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1751:29: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In member function ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1548:21: note: at offset [48, 52] into destination object ‘nz’ of size 4 1548 | int32_t nx, ny, nz; | ^~ [ 42%] Building CXX object CMakeFiles/_cmd.dir/layer0/Util.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Util.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Util.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Util.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Util.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Texture.cpp: In function ‘bool TextureIsCharTextured(PyMOLGlobals*, int, float*)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Texture.cpp:130:9: warning: unused variable ‘use_shader’ [-Wunused-variable] 130 | short use_shader = (short) SettingGetGlobal_b(G, cSetting_use_shaders); | ^~~~~~~~~~ [ 43%] Building CXX object CMakeFiles/_cmd.dir/layer0/Util2.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Util2.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Util2.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Util2.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Util2.cpp [ 43%] Building CXX object CMakeFiles/_cmd.dir/layer0/Vector.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Vector.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Vector.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Vector.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Vector.cpp [ 43%] Building CXX object CMakeFiles/_cmd.dir/layer0/Word.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Word.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Word.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Word.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Word.cpp [ 44%] Building CXX object CMakeFiles/_cmd.dir/layer0/ccealignmodule.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/ccealignmodule.cpp.o -MF CMakeFiles/_cmd.dir/layer0/ccealignmodule.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/ccealignmodule.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/ccealignmodule.cpp [ 44%] Building CXX object CMakeFiles/_cmd.dir/layer0/marching_cubes.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/marching_cubes.cpp.o -MF CMakeFiles/_cmd.dir/layer0/marching_cubes.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/marching_cubes.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/marching_cubes.cpp [ 45%] Building CXX object CMakeFiles/_cmd.dir/layer0/os_gl.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/os_gl.cpp.o -MF CMakeFiles/_cmd.dir/layer0/os_gl.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/os_gl.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/os_gl.cpp [ 45%] Building CXX object CMakeFiles/_cmd.dir/layer1/Basis.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Basis.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Basis.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Basis.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Basis.cpp [ 45%] Building CXX object CMakeFiles/_cmd.dir/layer1/ButMode.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/ButMode.cpp.o -MF CMakeFiles/_cmd.dir/layer1/ButMode.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/ButMode.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/ButMode.cpp [ 46%] Building CXX object CMakeFiles/_cmd.dir/layer1/CGO.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/CGO.cpp.o -MF CMakeFiles/_cmd.dir/layer1/CGO.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/CGO.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/CGO.cpp [ 46%] Building CXX object CMakeFiles/_cmd.dir/layer1/CGOGL.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/CGOGL.cpp.o -MF CMakeFiles/_cmd.dir/layer1/CGOGL.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/CGOGL.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/CGOGL.cpp [ 47%] Building CXX object CMakeFiles/_cmd.dir/layer1/CGORenderer.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/CGORenderer.cpp.o -MF CMakeFiles/_cmd.dir/layer1/CGORenderer.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/CGORenderer.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/CGORenderer.cpp [ 47%] Building CXX object CMakeFiles/_cmd.dir/layer1/COLLADA.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/COLLADA.cpp.o -MF CMakeFiles/_cmd.dir/layer1/COLLADA.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/COLLADA.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/COLLADA.cpp [ 48%] Building CXX object CMakeFiles/_cmd.dir/layer1/Camera.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Camera.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Camera.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Camera.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Camera.cpp [ 48%] Building CXX object CMakeFiles/_cmd.dir/layer1/Character.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Character.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Character.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Character.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Character.cpp [ 48%] Building CXX object CMakeFiles/_cmd.dir/layer1/Color.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Color.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Color.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Color.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Color.cpp [ 49%] Building CXX object CMakeFiles/_cmd.dir/layer1/Control.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Control.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Control.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Control.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Control.cpp [ 49%] Building CXX object CMakeFiles/_cmd.dir/layer1/Extrude.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Extrude.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Extrude.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Extrude.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Extrude.cpp [ 50%] Building CXX object CMakeFiles/_cmd.dir/layer1/Font.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Font.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Font.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Font.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Font.cpp [ 50%] Building CXX object CMakeFiles/_cmd.dir/layer1/FontGLUT.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/FontGLUT.cpp.o -MF CMakeFiles/_cmd.dir/layer1/FontGLUT.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/FontGLUT.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/FontGLUT.cpp [ 51%] Building CXX object CMakeFiles/_cmd.dir/layer1/FontGLUT8x13.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/FontGLUT8x13.cpp.o -MF CMakeFiles/_cmd.dir/layer1/FontGLUT8x13.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/FontGLUT8x13.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/FontGLUT8x13.cpp In file included from /build/reproducible-path/pymol-3.1.0+dfsg/include/tnt/tnt.h:45, from /build/reproducible-path/pymol-3.1.0+dfsg/layer0/ccealignmodule.cpp:39: In member function ‘void TNT::Array1D::set_(T*, T*, const T&) [with T = double]’, inlined from ‘TNT::Array1D::Array1D(int, const T&) [with T = double]’ at /build/reproducible-path/pymol-3.1.0+dfsg/include/tnt/tnt_array1d.h:119:6, inlined from ‘PyObject* findBest(pcePoint, pcePoint, pathCache, int, int, int)’ at /build/reproducible-path/pymol-3.1.0+dfsg/layer0/ccealignmodule.cpp:506:28: /build/reproducible-path/pymol-3.1.0+dfsg/include/tnt/tnt_array1d.h:283:20: warning: ‘void* __builtin_memset(void*, int, long unsigned int)’ specified bound between 18446744056529682432 and 18446744073709551608 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=] 283 | *p = a; | ~~~^~~ [ 51%] Building CXX object CMakeFiles/_cmd.dir/layer1/FontGLUT9x15.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/FontGLUT9x15.cpp.o -MF CMakeFiles/_cmd.dir/layer1/FontGLUT9x15.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/FontGLUT9x15.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/FontGLUT9x15.cpp [ 51%] Building CXX object CMakeFiles/_cmd.dir/layer1/FontGLUTHel10.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/FontGLUTHel10.cpp.o -MF CMakeFiles/_cmd.dir/layer1/FontGLUTHel10.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/FontGLUTHel10.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/FontGLUTHel10.cpp [ 52%] Building CXX object CMakeFiles/_cmd.dir/layer1/FontGLUTHel12.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/FontGLUTHel12.cpp.o -MF CMakeFiles/_cmd.dir/layer1/FontGLUTHel12.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/FontGLUTHel12.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/FontGLUTHel12.cpp [ 52%] Building CXX object CMakeFiles/_cmd.dir/layer1/FontGLUTHel18.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/FontGLUTHel18.cpp.o -MF CMakeFiles/_cmd.dir/layer1/FontGLUTHel18.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/FontGLUTHel18.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/FontGLUTHel18.cpp [ 53%] Building CXX object CMakeFiles/_cmd.dir/layer1/FontType.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/FontType.cpp.o -MF CMakeFiles/_cmd.dir/layer1/FontType.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/FontType.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/FontType.cpp [ 53%] Building CXX object CMakeFiles/_cmd.dir/layer1/ImageUtils.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/ImageUtils.cpp.o -MF CMakeFiles/_cmd.dir/layer1/ImageUtils.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/ImageUtils.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/ImageUtils.cpp [ 54%] Building CXX object CMakeFiles/_cmd.dir/layer1/Movie.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Movie.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Movie.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Movie.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Movie.cpp [ 54%] Building CXX object CMakeFiles/_cmd.dir/layer1/Ortho.cpp.o [ 54%] Building CXX object CMakeFiles/_cmd.dir/layer1/P.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/P.cpp.o -MF CMakeFiles/_cmd.dir/layer1/P.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/P.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/P.cpp /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Ortho.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Ortho.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Ortho.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Ortho.cpp [ 55%] Building CXX object CMakeFiles/_cmd.dir/layer1/PConv.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/PConv.cpp.o -MF CMakeFiles/_cmd.dir/layer1/PConv.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/PConv.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/PConv.cpp [ 55%] Building CXX object CMakeFiles/_cmd.dir/layer1/Picking.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Picking.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Picking.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Picking.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Picking.cpp [ 56%] Building CXX object CMakeFiles/_cmd.dir/layer1/Pop.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Pop.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Pop.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Pop.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Pop.cpp [ 56%] Building CXX object CMakeFiles/_cmd.dir/layer1/PyMOLObject.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/PyMOLObject.cpp.o -MF CMakeFiles/_cmd.dir/layer1/PyMOLObject.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/PyMOLObject.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/PyMOLObject.cpp [ 56%] Building CXX object CMakeFiles/_cmd.dir/layer1/Ray.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Ray.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Ray.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Ray.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Ray.cpp [ 57%] Building CXX object CMakeFiles/_cmd.dir/layer1/Rep.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Rep.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Rep.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Rep.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Rep.cpp [ 57%] Building CXX object CMakeFiles/_cmd.dir/layer1/Scene.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Scene.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Scene.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Scene.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Scene.cpp [ 58%] Building CXX object CMakeFiles/_cmd.dir/layer1/SceneMouse.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/SceneMouse.cpp.o -MF CMakeFiles/_cmd.dir/layer1/SceneMouse.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/SceneMouse.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SceneMouse.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer1/PyMOLObject.cpp: In function ‘int ObjectMotion(pymol::CObject*, MViewAction, int, int, float, float, int, float, int, int, int, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer1/PyMOLObject.cpp:193:15: warning: ignoring return value of ‘constexpr const _Tp& std::max(const _Tp&, const _Tp&) [with _Tp = int]’, declared with attribute ‘nodiscard’ [-Wunused-result] 193 | std::max(0, first); | ~~~~~~~~^~~~~~~~~~ In file included from /usr/include/c++/15/bits/stl_uninitialized.h:63, from /usr/include/c++/15/memory:71, from /build/reproducible-path/pymol-3.1.0+dfsg/layer0/os_python.h:23, from /build/reproducible-path/pymol-3.1.0+dfsg/layer1/PyMOLObject.cpp:17: /usr/include/c++/15/bits/stl_algobase.h:258:5: note: declared here 258 | max(const _Tp& __a, const _Tp& __b) | ^~~ In file included from /usr/include/c++/15/bits/stl_algobase.h:64, from /usr/include/c++/15/bits/specfun.h:43, from /usr/include/c++/15/cmath:3913, from /usr/include/c++/15/math.h:36, from /build/reproducible-path/pymol-3.1.0+dfsg/layer0/os_std.h:24, from /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Scene.cpp:18: /usr/include/c++/15/bits/stl_pair.h: In instantiation of ‘constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = float&; _T2 = float&; typename __strip_reference_wrapper::type>::__type = float; typename decay<_Tp>::type = float; typename __strip_reference_wrapper::type>::__type = float; typename decay<_Tp2>::type = float]’: /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Scene.cpp:1469:24: required from here 1469 | return std::make_pair(clip.m_front, clip.m_back); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_pair.h:1164:5: note: parameter passing for argument of type ‘std::pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 1164 | make_pair(_T1&& __x, _T2&& __y) | ^~~~~~~~~ [ 58%] Building CXX object CMakeFiles/_cmd.dir/layer1/ScenePicking.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/ScenePicking.cpp.o -MF CMakeFiles/_cmd.dir/layer1/ScenePicking.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/ScenePicking.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/ScenePicking.cpp [ 59%] Building CXX object CMakeFiles/_cmd.dir/layer1/SceneRay.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/SceneRay.cpp.o -MF CMakeFiles/_cmd.dir/layer1/SceneRay.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/SceneRay.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SceneRay.cpp [ 59%] Building CXX object CMakeFiles/_cmd.dir/layer1/SceneRender.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/SceneRender.cpp.o -MF CMakeFiles/_cmd.dir/layer1/SceneRender.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/SceneRender.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SceneRender.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SceneMouse.cpp: In function ‘void SceneClickTransformObject(PyMOLGlobals*, pymol::CObject*, const NamedPicking&, int, bool)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SceneMouse.cpp:455:32: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 237 [-Wformat-truncation=] 455 | " You clicked %s -> (%s)\n", buffer.c_str(), name ENDFB(G); | ^~ ~~~~ In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SceneMouse.cpp:19: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output 21 or more bytes (assuming 276) into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SceneMouse.cpp:454:11: note: in expansion of macro ‘PRINTFB’ 454 | PRINTFB(G, FB_Scene, FB_Results) | ^~~~~~~ [ 59%] Building CXX object CMakeFiles/_cmd.dir/layer1/SceneView.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/SceneView.cpp.o -MF CMakeFiles/_cmd.dir/layer1/SceneView.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/SceneView.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SceneView.cpp [ 60%] Building CXX object CMakeFiles/_cmd.dir/layer1/ScrollBar.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/ScrollBar.cpp.o -MF CMakeFiles/_cmd.dir/layer1/ScrollBar.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/ScrollBar.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/ScrollBar.cpp [ 60%] Building CXX object CMakeFiles/_cmd.dir/layer1/Seq.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Seq.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Seq.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Seq.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Seq.cpp [ 61%] Building CXX object CMakeFiles/_cmd.dir/layer1/Setting.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Setting.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Setting.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Setting.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Setting.cpp [ 61%] Building CXX object CMakeFiles/_cmd.dir/layer1/Shaker.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Shaker.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Shaker.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Shaker.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Shaker.cpp [ 62%] Building CXX object CMakeFiles/_cmd.dir/layer1/SymOp.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/SymOp.cpp.o -MF CMakeFiles/_cmd.dir/layer1/SymOp.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/SymOp.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SymOp.cpp [ 62%] Building CXX object CMakeFiles/_cmd.dir/layer1/SymOpPConv.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/SymOpPConv.cpp.o -MF CMakeFiles/_cmd.dir/layer1/SymOpPConv.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/SymOpPConv.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SymOpPConv.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SymOp.cpp: In member function ‘std::string pymol::SymOp::to_string() const’: /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SymOp.cpp:37:32: warning: ‘%d’ directive output may be truncated writing between 1 and 4 bytes into a region of size between 0 and 5 [-Wformat-truncation=] 37 | std::snprintf(code, 8, "%u_%d%d%d", index + 1, x + 5, y + 5, z + 5); | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SymOp.cpp:37:26: note: directive argument in the range [-123, 132] 37 | std::snprintf(code, 8, "%u_%d%d%d", index + 1, x + 5, y + 5, z + 5); | ^~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SymOp.cpp:37:26: note: directive argument in the range [-123, 132] /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SymOp.cpp:37:16: note: ‘snprintf’ output between 6 and 17 bytes into a destination of size 8 37 | std::snprintf(code, 8, "%u_%d%d%d", index + 1, x + 5, y + 5, z + 5); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 62%] Building CXX object CMakeFiles/_cmd.dir/layer1/SymOpTools.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/SymOpTools.cpp.o -MF CMakeFiles/_cmd.dir/layer1/SymOpTools.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/SymOpTools.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SymOpTools.cpp [ 63%] Building CXX object CMakeFiles/_cmd.dir/layer1/Symmetry.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Symmetry.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Symmetry.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Symmetry.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Symmetry.cpp [ 63%] Building CXX object CMakeFiles/_cmd.dir/layer1/Text.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Text.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Text.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Text.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Text.cpp [ 64%] Building CXX object CMakeFiles/_cmd.dir/layer1/TypeFace.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/TypeFace.cpp.o -MF CMakeFiles/_cmd.dir/layer1/TypeFace.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/TypeFace.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/TypeFace.cpp [ 64%] Building CXX object CMakeFiles/_cmd.dir/layer1/View.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/View.cpp.o -MF CMakeFiles/_cmd.dir/layer1/View.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/View.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/View.cpp [ 64%] Building CXX object CMakeFiles/_cmd.dir/layer1/Wizard.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Wizard.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Wizard.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Wizard.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Wizard.cpp [ 65%] Building CXX object CMakeFiles/_cmd.dir/layer2/AssemblyHelpers.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/AssemblyHelpers.cpp.o -MF CMakeFiles/_cmd.dir/layer2/AssemblyHelpers.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/AssemblyHelpers.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/AssemblyHelpers.cpp [ 65%] Building CXX object CMakeFiles/_cmd.dir/layer2/AtomInfo.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/AtomInfo.cpp.o -MF CMakeFiles/_cmd.dir/layer2/AtomInfo.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/AtomInfo.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/AtomInfo.cpp [ 66%] Building CXX object CMakeFiles/_cmd.dir/layer2/AtomInfoHistory.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/AtomInfoHistory.cpp.o -MF CMakeFiles/_cmd.dir/layer2/AtomInfoHistory.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/AtomInfoHistory.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/AtomInfoHistory.cpp [ 66%] Building CXX object CMakeFiles/_cmd.dir/layer2/BondTypeHistory.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/BondTypeHistory.cpp.o -MF CMakeFiles/_cmd.dir/layer2/BondTypeHistory.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/BondTypeHistory.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/BondTypeHistory.cpp [ 67%] Building CXX object CMakeFiles/_cmd.dir/layer2/CifFile.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/CifFile.cpp.o -MF CMakeFiles/_cmd.dir/layer2/CifFile.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/CifFile.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/CifFile.cpp [ 67%] Building CXX object CMakeFiles/_cmd.dir/layer2/CifMoleculeReader.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/CifMoleculeReader.cpp.o -MF CMakeFiles/_cmd.dir/layer2/CifMoleculeReader.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/CifMoleculeReader.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/CifMoleculeReader.cpp [ 67%] Building CXX object CMakeFiles/_cmd.dir/layer2/CoordSet.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/CoordSet.cpp.o -MF CMakeFiles/_cmd.dir/layer2/CoordSet.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/CoordSet.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/CoordSet.cpp [ 68%] Building CXX object CMakeFiles/_cmd.dir/layer2/DistSet.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/DistSet.cpp.o -MF CMakeFiles/_cmd.dir/layer2/DistSet.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/DistSet.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/DistSet.cpp [ 68%] Building CXX object CMakeFiles/_cmd.dir/layer2/GadgetSet.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/GadgetSet.cpp.o -MF CMakeFiles/_cmd.dir/layer2/GadgetSet.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/GadgetSet.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/GadgetSet.cpp [ 69%] Building CXX object CMakeFiles/_cmd.dir/layer2/HydrogenAdder.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/HydrogenAdder.cpp.o -MF CMakeFiles/_cmd.dir/layer2/HydrogenAdder.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/HydrogenAdder.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/HydrogenAdder.cpp [ 69%] Building CXX object CMakeFiles/_cmd.dir/layer2/MmodTyping.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/MmodTyping.cpp.o -MF CMakeFiles/_cmd.dir/layer2/MmodTyping.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/MmodTyping.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/MmodTyping.cpp [ 70%] Building CXX object CMakeFiles/_cmd.dir/layer2/MmtfMoleculeReader.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/MmtfMoleculeReader.cpp.o -MF CMakeFiles/_cmd.dir/layer2/MmtfMoleculeReader.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/MmtfMoleculeReader.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/MmtfMoleculeReader.cpp [ 70%] Building CXX object CMakeFiles/_cmd.dir/layer2/Mol2Typing.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/Mol2Typing.cpp.o -MF CMakeFiles/_cmd.dir/layer2/Mol2Typing.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/Mol2Typing.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/Mol2Typing.cpp [ 70%] Building CXX object CMakeFiles/_cmd.dir/layer2/MolV3000.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/MolV3000.cpp.o -MF CMakeFiles/_cmd.dir/layer2/MolV3000.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/MolV3000.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/MolV3000.cpp [ 71%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectAlignment.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/ObjectAlignment.cpp.o -MF CMakeFiles/_cmd.dir/layer2/ObjectAlignment.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/ObjectAlignment.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectAlignment.cpp [ 71%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectCGO.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/ObjectCGO.cpp.o -MF CMakeFiles/_cmd.dir/layer2/ObjectCGO.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/ObjectCGO.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectCGO.cpp [ 72%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectCallback.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/ObjectCallback.cpp.o -MF CMakeFiles/_cmd.dir/layer2/ObjectCallback.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/ObjectCallback.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectCallback.cpp [ 72%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectCurve.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/ObjectCurve.cpp.o -MF CMakeFiles/_cmd.dir/layer2/ObjectCurve.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/ObjectCurve.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectCurve.cpp [ 72%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectDist.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/ObjectDist.cpp.o -MF CMakeFiles/_cmd.dir/layer2/ObjectDist.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/ObjectDist.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectDist.cpp [ 73%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectGadget.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/ObjectGadget.cpp.o -MF CMakeFiles/_cmd.dir/layer2/ObjectGadget.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/ObjectGadget.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectGadget.cpp [ 73%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectGadgetRamp.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/ObjectGadgetRamp.cpp.o -MF CMakeFiles/_cmd.dir/layer2/ObjectGadgetRamp.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/ObjectGadgetRamp.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectGadgetRamp.cpp [ 74%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectGroup.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/ObjectGroup.cpp.o -MF CMakeFiles/_cmd.dir/layer2/ObjectGroup.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/ObjectGroup.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectGroup.cpp [ 74%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectMap.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/ObjectMap.cpp.o -MF CMakeFiles/_cmd.dir/layer2/ObjectMap.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/ObjectMap.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp [ 75%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectMesh.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/ObjectMesh.cpp.o -MF CMakeFiles/_cmd.dir/layer2/ObjectMesh.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/ObjectMesh.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMesh.cpp [ 75%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectMolecule.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/ObjectMolecule.cpp.o -MF CMakeFiles/_cmd.dir/layer2/ObjectMolecule.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/ObjectMolecule.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp [ 75%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectMolecule2.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/ObjectMolecule2.cpp.o -MF CMakeFiles/_cmd.dir/layer2/ObjectMolecule2.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/ObjectMolecule2.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule2.cpp [ 76%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectMolecule3.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/ObjectMolecule3.cpp.o -MF CMakeFiles/_cmd.dir/layer2/ObjectMolecule3.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/ObjectMolecule3.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule3.cpp [ 76%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectSlice.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/ObjectSlice.cpp.o -MF CMakeFiles/_cmd.dir/layer2/ObjectSlice.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/ObjectSlice.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSlice.cpp [ 77%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectSurface.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/ObjectSurface.cpp.o -MF CMakeFiles/_cmd.dir/layer2/ObjectSurface.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/ObjectSurface.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSurface.cpp [ 77%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectVolume.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/ObjectVolume.cpp.o -MF CMakeFiles/_cmd.dir/layer2/ObjectVolume.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/ObjectVolume.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectVolume.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSlice.cpp: In member function ‘virtual void ObjectSlice::update()’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSlice.cpp:639:42: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 225 [-Wformat-truncation=] 639 | "ObjectSliceUpdate-Error: map '%s' has been deleted.\n", oss->MapName | ^~ In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSlice.cpp:44: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 51 and 306 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSlice.cpp:638:9: note: in expansion of macro ‘PRINTFB’ 638 | PRINTFB(I->G, FB_ObjectSlice, FB_Errors) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSlice.cpp:650:39: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 231 [-Wformat-truncation=] 650 | " ObjectSlice: updating \"%s\".\n", I->Name ENDFB(I->G); | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 28 and 283 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSlice.cpp:649:11: note: in expansion of macro ‘PRINTFB’ 649 | PRINTFB(I->G, FB_ObjectSlice, FB_Blather) | ^~~~~~~ [ 78%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepAngle.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepAngle.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepAngle.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepAngle.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepAngle.cpp [ 78%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepCartoon.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepCartoon.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepCartoon.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepCartoon.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepCartoon.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMesh.cpp: In member function ‘virtual void ObjectMesh::update()’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMesh.cpp:508:39: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 226 [-Wformat-truncation=] 508 | "ObjectMeshUpdate-Error: map '%s' has been deleted.\n", | ^~ In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMesh.cpp:28: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 50 and 305 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMesh.cpp:507:9: note: in expansion of macro ‘PRINTFB’ 507 | PRINTFB(I->G, FB_ObjectMesh, FB_Errors) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMesh.cpp:541:38: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 232 [-Wformat-truncation=] 541 | " ObjectMesh: updating \"%s\".\n", I->Name ENDFB(G); | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 27 and 282 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMesh.cpp:540:13: note: in expansion of macro ‘PRINTFB’ 540 | PRINTFB(G, FB_ObjectMesh, FB_Details) | ^~~~~~~ [ 78%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepCylBond.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepCylBond.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepCylBond.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepCylBond.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepCylBond.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectVolume.cpp: In function ‘ObjectMapState* ObjectVolumeStateGetMapState(ObjectVolumeState*)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectVolume.cpp:80:33: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 230 [-Wformat-truncation=] 80 | "ObjectVolume-Error: map '%s' has been deleted.\n", vs->MapName | ^~ In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectVolume.cpp:47: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 46 and 301 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectVolume.cpp:79:5: note: in expansion of macro ‘PRINTFB’ 79 | PRINTFB(G, FB_ObjectVolume, FB_Errors) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMesh.cpp: In function ‘void ObjectMeshDump(ObjectMesh*, const char*, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMesh.cpp:333:25: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 238 [-Wformat-truncation=] 333 | " ObjectMeshDump: %s written to %s\n", I->Name, fname ENDFB(I->G); | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output 31 or more bytes (assuming 286) into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMesh.cpp:332:7: note: in expansion of macro ‘PRINTFB’ 332 | PRINTFB(I->G, FB_ObjectMesh, FB_Actions) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSurface.cpp: In function ‘void ObjectSurfaceDump(ObjectSurface*, const char*, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSurface.cpp:269:30: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 235 [-Wformat-truncation=] 269 | " ObjectSurfaceDump: %s written to %s\n", I->Name, fname ENDFB(I->G); | ^~ In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSurface.cpp:45: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output 34 or more bytes (assuming 289) into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSurface.cpp:268:7: note: in expansion of macro ‘PRINTFB’ 268 | PRINTFB(I->G, FB_ObjectSurface, FB_Actions) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp: In function ‘CoordSet* ObjectMoleculeMOLStr2CoordSet.constprop(PyMOLGlobals*, const char*, AtomInfoType**, const char**)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp:7597:37: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 224 [-Wformat-truncation=] 7597 | " ObjMolMOLStr2CoordSet: title '%s'\n", nameTmp ENDFB(G) | ^~ ~~~~~~~ In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp:49: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 34 and 289 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp:7596:3: note: in expansion of macro ‘PRINTFB’ 7596 | PRINTFB(G, FB_ObjectMolecule, FB_Blather) | ^~~~~~~ [ 79%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepDihedral.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepDihedral.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepDihedral.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepDihedral.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepDihedral.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp: In function ‘void ObjectMapDump(const ObjectMap*, const char*, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:5984:24: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 239 [-Wformat-truncation=] 5984 | " ObjectMapDump: %s written to %s\n", om->Name, fname ENDFB(om->G); | ^~ In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:48: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output 30 or more bytes (assuming 285) into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:5983:5: note: in expansion of macro ‘PRINTFB’ 5983 | PRINTFB(om->G, FB_ObjectMap, FB_Actions) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSurface.cpp: In member function ‘virtual void ObjectSurface::update()’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSurface.cpp:494:43: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 229 [-Wformat-truncation=] 494 | " ObjectSurface: updating \"%s\".\n", I->Name ENDFB(I->G); | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 30 and 285 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSurface.cpp:493:13: note: in expansion of macro ‘PRINTFB’ 493 | PRINTFB(I->G, FB_ObjectSurface, FB_Details) | ^~~~~~~ [ 79%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepDistDash.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepDistDash.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepDistDash.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepDistDash.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepDistDash.cpp [ 80%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepDistLabel.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepDistLabel.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepDistLabel.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepDistLabel.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepDistLabel.cpp [ 80%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepDot.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepDot.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepDot.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepDot.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepDot.cpp [ 81%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepEllipsoid.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepEllipsoid.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepEllipsoid.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepEllipsoid.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepEllipsoid.cpp [ 81%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepLabel.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepLabel.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepLabel.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepLabel.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepLabel.cpp [ 81%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepMesh.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepMesh.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepMesh.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepMesh.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepMesh.cpp [ 82%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepNonbonded.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepNonbonded.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepNonbonded.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepNonbonded.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepNonbonded.cpp [ 82%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepNonbondedSphere.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepNonbondedSphere.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepNonbondedSphere.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepNonbondedSphere.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepNonbondedSphere.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp: In function ‘int ObjectMapGRDStrToMap(ObjectMap*, char*, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4291:18: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 243 [-Wformat-truncation=] 4291 | " ObjectMap: %s\n", cc ENDFB(I->G); | ^~ ~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 14 and 1037 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4290:3: note: in expansion of macro ‘PRINTFB’ 4290 | PRINTFB(I->G, FB_ObjectMap, FB_Details) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4291:18: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 243 [-Wformat-truncation=] 4291 | " ObjectMap: %s\n", cc ENDFB(I->G); | ^~ ~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 14 and 1037 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4290:3: note: in expansion of macro ‘PRINTFB’ 4290 | PRINTFB(I->G, FB_ObjectMap, FB_Details) | ^~~~~~~ [ 83%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepRibbon.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepRibbon.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepRibbon.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepRibbon.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepRibbon.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule2.cpp: In function ‘int ObjectMoleculeAddPseudoatom(ObjectMolecule*, int, const char*, const char*, const char*, const char*, const char*, const char*, float, int, float, float, const char*, const float*, int, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule2.cpp:335:27: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 238 [-Wformat-truncation=] 335 | " ObjMol: created %s/%s/%s/%s`%d%c/%s\n", | ^~ In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule2.cpp:36: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 26 and 291 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule2.cpp:334:7: note: in expansion of macro ‘PRINTFB’ 334 | PRINTFB(G, FB_ObjectMolecule, FB_Actions) | ^~~~~~~ [ 83%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepSphere.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepSphere.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepSphere.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepSphere.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepSphere.cpp [ 83%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepSphereGenerate.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepSphereGenerate.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepSphereGenerate.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepSphereGenerate.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepSphereGenerate.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp: In member function ‘virtual void ObjectMolecule::update()’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp:10623:82: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size between 181 and 191 [-Wformat-truncation=] 10623 | " ObjectMolecule-DEBUG: updating representations for state %d of \"%s\".\n", | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 68 and 333 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp:10622:13: note: in expansion of macro ‘PRINTFB’ 10622 | PRINTFB(G, FB_ObjectMolecule, FB_Blather) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp: In function ‘int ObjectMoleculeMoveAtom(ObjectMolecule*, int, int, const float*, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp:10749:43: warning: ‘%s’ directive writing up to 1023 bytes into a region of size 1004 [-Wformat-overflow=] 10749 | sprintf(line, "cmd.translate_atom(\"%s\",%15.9f,%15.9f,%15.9f,%d,%d,%d)\n", | ^~ 10750 | buffer, v[0], v[1], v[2], state + 1, mode, 0); | ~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp:10749:21: note: directive argument in the range [-2147483647, 2147483647] 10749 | sprintf(line, "cmd.translate_atom(\"%s\",%15.9f,%15.9f,%15.9f,%d,%d,%d)\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp:10749:14: note: ‘sprintf’ output between 78 and 2036 bytes into a destination of size 1024 10749 | sprintf(line, "cmd.translate_atom(\"%s\",%15.9f,%15.9f,%15.9f,%d,%d,%d)\n", | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 10750 | buffer, v[0], v[1], v[2], state + 1, mode, 0); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 84%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepSphereImmediate.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepSphereImmediate.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepSphereImmediate.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepSphereImmediate.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepSphereImmediate.cpp [ 84%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepSurface.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepSurface.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepSurface.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepSurface.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepSurface.cpp [ 85%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepWireBond.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepWireBond.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepWireBond.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepWireBond.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepWireBond.cpp [ 85%] Building CXX object CMakeFiles/_cmd.dir/layer2/Sculpt.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/Sculpt.cpp.o -MF CMakeFiles/_cmd.dir/layer2/Sculpt.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/Sculpt.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/Sculpt.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp: In function ‘ObjectMap* ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, const char*, int, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:2962:22: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 241 [-Wformat-truncation=] 2962 | " PHIStrToMap: %s\n", cc ENDFB(I->G); | ^~ ~~ In function ‘int ObjectMapPHIStrToMap(ObjectMap*, char*, int, int, int)’, inlined from ‘ObjectMap* ObjectMapReadPHIStr(PyMOLGlobals*, ObjectMap*, char*, int, int, int)’ at /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4804:25, inlined from ‘ObjectMap* ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, const char*, int, int, int, int)’ at /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4836:28: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 16 and 1039 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:2961:5: note: in expansion of macro ‘PRINTFB’ 2961 | PRINTFB(I->G, FB_ObjectMap, FB_Details) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp: In function ‘ObjectMap* ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, const char*, int, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:2971:22: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 241 [-Wformat-truncation=] 2971 | " PHIStrToMap: %s\n", cc ENDFB(I->G); | ^~ ~~ In function ‘int ObjectMapPHIStrToMap(ObjectMap*, char*, int, int, int)’, inlined from ‘ObjectMap* ObjectMapReadPHIStr(PyMOLGlobals*, ObjectMap*, char*, int, int, int)’ at /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4804:25, inlined from ‘ObjectMap* ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, const char*, int, int, int, int)’ at /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4836:28: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 16 and 1039 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:2970:5: note: in expansion of macro ‘PRINTFB’ 2970 | PRINTFB(I->G, FB_ObjectMap, FB_Details) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp: In function ‘ObjectMap* ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, const char*, int, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:2977:22: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 241 [-Wformat-truncation=] 2977 | " PHIStrToMap: %s\n", cc ENDFB(I->G); | ^~ ~~ In function ‘int ObjectMapPHIStrToMap(ObjectMap*, char*, int, int, int)’, inlined from ‘ObjectMap* ObjectMapReadPHIStr(PyMOLGlobals*, ObjectMap*, char*, int, int, int)’ at /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4804:25, inlined from ‘ObjectMap* ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, const char*, int, int, int, int)’ at /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4836:28: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 16 and 1039 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:2976:5: note: in expansion of macro ‘PRINTFB’ 2976 | PRINTFB(I->G, FB_ObjectMap, FB_Details) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp: In function ‘ObjectMap* ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, const char*, int, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:3059:22: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 241 [-Wformat-truncation=] 3059 | " PHIStrToMap: %s\n", cc ENDFB(I->G); | ^~ ~~ In function ‘int ObjectMapPHIStrToMap(ObjectMap*, char*, int, int, int)’, inlined from ‘ObjectMap* ObjectMapReadPHIStr(PyMOLGlobals*, ObjectMap*, char*, int, int, int)’ at /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4804:25, inlined from ‘ObjectMap* ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, const char*, int, int, int, int)’ at /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4836:28: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 16 and 1039 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:3058:5: note: in expansion of macro ‘PRINTFB’ 3058 | PRINTFB(I->G, FB_ObjectMap, FB_Details) | ^~~~~~~ [ 86%] Building CXX object CMakeFiles/_cmd.dir/layer2/SculptCache.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/SculptCache.cpp.o -MF CMakeFiles/_cmd.dir/layer2/SculptCache.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/SculptCache.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/SculptCache.cpp [ 86%] Building CXX object CMakeFiles/_cmd.dir/layer2/SideChainHelper.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/SideChainHelper.cpp.o -MF CMakeFiles/_cmd.dir/layer2/SideChainHelper.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/SideChainHelper.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/SideChainHelper.cpp [ 86%] Building CXX object CMakeFiles/_cmd.dir/layer2/VFont.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/VFont.cpp.o -MF CMakeFiles/_cmd.dir/layer2/VFont.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/VFont.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/VFont.cpp [ 87%] Building CXX object CMakeFiles/_cmd.dir/layer3/AtomIterators.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/AtomIterators.cpp.o -MF CMakeFiles/_cmd.dir/layer3/AtomIterators.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/AtomIterators.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/AtomIterators.cpp [ 87%] Building CXX object CMakeFiles/_cmd.dir/layer3/CifDataValueFormatter.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/CifDataValueFormatter.cpp.o -MF CMakeFiles/_cmd.dir/layer3/CifDataValueFormatter.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/CifDataValueFormatter.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/CifDataValueFormatter.cpp [ 88%] Building CXX object CMakeFiles/_cmd.dir/layer3/Editor.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/Editor.cpp.o -MF CMakeFiles/_cmd.dir/layer3/Editor.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/Editor.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp [ 88%] Building CXX object CMakeFiles/_cmd.dir/layer3/Executive.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/Executive.cpp.o -MF CMakeFiles/_cmd.dir/layer3/Executive.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/Executive.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp [ 89%] Building CXX object CMakeFiles/_cmd.dir/layer3/ExecutivePython.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/ExecutivePython.cpp.o -MF CMakeFiles/_cmd.dir/layer3/ExecutivePython.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/ExecutivePython.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/ExecutivePython.cpp [ 89%] Building CXX object CMakeFiles/_cmd.dir/layer3/Interactions.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/Interactions.cpp.o -MF CMakeFiles/_cmd.dir/layer3/Interactions.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/Interactions.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Interactions.cpp [ 89%] Building CXX object CMakeFiles/_cmd.dir/layer3/MaeExportHelpers.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/MaeExportHelpers.cpp.o -MF CMakeFiles/_cmd.dir/layer3/MaeExportHelpers.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/MaeExportHelpers.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/MaeExportHelpers.cpp [ 90%] Building CXX object CMakeFiles/_cmd.dir/layer3/MoleculeExporter.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/MoleculeExporter.cpp.o -MF CMakeFiles/_cmd.dir/layer3/MoleculeExporter.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/MoleculeExporter.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/MoleculeExporter.cpp [ 90%] Building CXX object CMakeFiles/_cmd.dir/layer3/MovieScene.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/MovieScene.cpp.o -MF CMakeFiles/_cmd.dir/layer3/MovieScene.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/MovieScene.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/MovieScene.cpp [ 91%] Building CXX object CMakeFiles/_cmd.dir/layer3/PlugIOManager.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/PlugIOManager.cpp.o -MF CMakeFiles/_cmd.dir/layer3/PlugIOManager.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/PlugIOManager.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/PlugIOManager.cpp [ 91%] Building CXX object CMakeFiles/_cmd.dir/layer3/RingFinder.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/RingFinder.cpp.o -MF CMakeFiles/_cmd.dir/layer3/RingFinder.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/RingFinder.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/RingFinder.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp: In function ‘void EditorPrepareDrag(PyMOLGlobals*, pymol::CObject*, int, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp:1935:29: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 236 [-Wformat-truncation=] 1935 | " Editor: grabbing (%s).", name ENDFB(G); | ^~ ~~~~ In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp:42: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 22 and 277 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp:1934:7: note: in expansion of macro ‘PRINTFB’ 1934 | PRINTFB(G, FB_Editor, FB_Blather) | ^~~~~~~ [ 91%] Building CXX object CMakeFiles/_cmd.dir/layer3/Seeker.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/Seeker.cpp.o -MF CMakeFiles/_cmd.dir/layer3/Seeker.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/Seeker.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Seeker.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp: In function ‘void EditorDefineExtraPks(PyMOLGlobals*)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp:337:29: warning: ‘%s’ directive writing up to 255 bytes into a region of size 249 [-Wformat-overflow=] 337 | sprintf(buffer, "(byres %s)", name); | ^~ ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp:337:12: note: ‘sprintf’ output between 9 and 264 bytes into a destination of size 256 337 | sprintf(buffer, "(byres %s)", name); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp:339:31: warning: ‘%s’ directive writing up to 255 bytes into a region of size 247 [-Wformat-overflow=] 339 | sprintf(buffer, "(bychain %s)", name); | ^~ ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp:339:12: note: ‘sprintf’ output between 11 and 266 bytes into a destination of size 256 339 | sprintf(buffer, "(bychain %s)", name); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp:341:32: warning: ‘%s’ directive writing up to 255 bytes into a region of size 246 [-Wformat-overflow=] 341 | sprintf(buffer, "(byobject %s)", name); | ^~ ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp:341:12: note: ‘sprintf’ output between 12 and 267 bytes into a destination of size 256 341 | sprintf(buffer, "(byobject %s)", name); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 92%] Building CXX object CMakeFiles/_cmd.dir/layer3/Selector.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/Selector.cpp.o -MF CMakeFiles/_cmd.dir/layer3/Selector.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/Selector.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Selector.cpp [ 92%] Building CXX object CMakeFiles/_cmd.dir/layer3/SelectorTmp.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/SelectorTmp.cpp.o -MF CMakeFiles/_cmd.dir/layer3/SelectorTmp.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/SelectorTmp.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/SelectorTmp.cpp In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Setting.h:27, from /build/reproducible-path/pymol-3.1.0+dfsg/layer1/PyMOLObject.h:25, from /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.h:27, from /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:38: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Result.h: In constructor ‘pymol::Result::Result(type) [with ResultT = std::pair]’: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Result.h:99:3: note: parameter passing for argument of type ‘std::pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 99 | Result(type r) : m_result(std::move(r)) {} | ^~~~~~ [ 93%] Building CXX object CMakeFiles/_cmd.dir/layer3/SpecRec.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/SpecRec.cpp.o -MF CMakeFiles/_cmd.dir/layer3/SpecRec.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/SpecRec.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/SpecRec.cpp [ 93%] Building CXX object CMakeFiles/_cmd.dir/layer3/SpecRecSpecial.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/SpecRecSpecial.cpp.o -MF CMakeFiles/_cmd.dir/layer3/SpecRecSpecial.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/SpecRecSpecial.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/SpecRecSpecial.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer3/PlugIOManager.cpp: In function ‘pymol::CObject* PlugIOManagerLoad(PyMOLGlobals*, pymol::CObject**, const char*, int, int, const char*, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/PlugIOManager.cpp:941:65: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 200 [-Wformat-truncation=] 941 | " PlugIOManagerLoad: can't load trajectory into object '%s'\n", obj->Name ENDFB(G); | ^~ In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer3/PlugIOManager.cpp:28: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 58 and 313 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/PlugIOManager.cpp:940:7: note: in expansion of macro ‘PRINTFB’ 940 | PRINTFB(G, FB_ObjectMolecule, FB_Errors) | ^~~~~~~ [ 94%] Building CXX object CMakeFiles/_cmd.dir/layer4/Cmd.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer4/Cmd.cpp.o -MF CMakeFiles/_cmd.dir/layer4/Cmd.cpp.o.d -o CMakeFiles/_cmd.dir/layer4/Cmd.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer4/Cmd.cpp [ 94%] Building CXX object CMakeFiles/_cmd.dir/layer4/Menu.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer4/Menu.cpp.o -MF CMakeFiles/_cmd.dir/layer4/Menu.cpp.o.d -o CMakeFiles/_cmd.dir/layer4/Menu.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer4/Menu.cpp [ 94%] Building CXX object CMakeFiles/_cmd.dir/layer4/PopUp.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer4/PopUp.cpp.o -MF CMakeFiles/_cmd.dir/layer4/PopUp.cpp.o.d -o CMakeFiles/_cmd.dir/layer4/PopUp.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer4/PopUp.cpp [ 95%] Building CXX object CMakeFiles/_cmd.dir/layer5/PyMOL.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer5/PyMOL.cpp.o -MF CMakeFiles/_cmd.dir/layer5/PyMOL.cpp.o.d -o CMakeFiles/_cmd.dir/layer5/PyMOL.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer5/PyMOL.cpp [ 95%] Building CXX object CMakeFiles/_cmd.dir/layer5/TestPyMOL.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer5/TestPyMOL.cpp.o -MF CMakeFiles/_cmd.dir/layer5/TestPyMOL.cpp.o.d -o CMakeFiles/_cmd.dir/layer5/TestPyMOL.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer5/TestPyMOL.cpp [ 96%] Building CXX object CMakeFiles/_cmd.dir/layer5/main.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer5/main.cpp.o -MF CMakeFiles/_cmd.dir/layer5/main.cpp.o.d -o CMakeFiles/_cmd.dir/layer5/main.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer5/main.cpp [ 96%] Building CXX object CMakeFiles/_cmd.dir/ov/src/OVContext.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/ov/src/OVContext.cpp.o -MF CMakeFiles/_cmd.dir/ov/src/OVContext.cpp.o.d -o CMakeFiles/_cmd.dir/ov/src/OVContext.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/ov/src/OVContext.cpp [ 97%] Building CXX object CMakeFiles/_cmd.dir/ov/src/OVHeap.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/ov/src/OVHeap.cpp.o -MF CMakeFiles/_cmd.dir/ov/src/OVHeap.cpp.o.d -o CMakeFiles/_cmd.dir/ov/src/OVHeap.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/ov/src/OVHeap.cpp [ 97%] Building CXX object CMakeFiles/_cmd.dir/ov/src/OVHeapArray.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/ov/src/OVHeapArray.cpp.o -MF CMakeFiles/_cmd.dir/ov/src/OVHeapArray.cpp.o.d -o CMakeFiles/_cmd.dir/ov/src/OVHeapArray.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/ov/src/OVHeapArray.cpp [ 97%] Building CXX object CMakeFiles/_cmd.dir/ov/src/OVLexicon.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/ov/src/OVLexicon.cpp.o -MF CMakeFiles/_cmd.dir/ov/src/OVLexicon.cpp.o.d -o CMakeFiles/_cmd.dir/ov/src/OVLexicon.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/ov/src/OVLexicon.cpp [ 98%] Building CXX object CMakeFiles/_cmd.dir/ov/src/OVOneToAny.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/ov/src/OVOneToAny.cpp.o -MF CMakeFiles/_cmd.dir/ov/src/OVOneToAny.cpp.o.d -o CMakeFiles/_cmd.dir/ov/src/OVOneToAny.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/ov/src/OVOneToAny.cpp [ 98%] Building CXX object CMakeFiles/_cmd.dir/ov/src/OVOneToOne.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/ov/src/OVOneToOne.cpp.o -MF CMakeFiles/_cmd.dir/ov/src/OVOneToOne.cpp.o.d -o CMakeFiles/_cmd.dir/ov/src/OVOneToOne.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/ov/src/OVOneToOne.cpp [ 99%] Building CXX object CMakeFiles/_cmd.dir/ov/src/OVRandom.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/ov/src/OVRandom.cpp.o -MF CMakeFiles/_cmd.dir/ov/src/OVRandom.cpp.o.d -o CMakeFiles/_cmd.dir/ov/src/OVRandom.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/ov/src/OVRandom.cpp [ 99%] Building CXX object CMakeFiles/_cmd.dir/ov/src/ov_utility.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/ov/src/ov_utility.cpp.o -MF CMakeFiles/_cmd.dir/ov/src/ov_utility.cpp.o.d -o CMakeFiles/_cmd.dir/ov/src/ov_utility.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/ov/src/ov_utility.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘pymol::Result<> ExecutiveRemoveAtoms(PyMOLGlobals*, const char*, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:9120:58: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size between 207 and 217 [-Wformat-truncation=] 9120 | " Remove: eliminated %d atoms in model \"%s\".\n", | ^~ In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:94: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 42 and 307 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:9119:15: note: in expansion of macro ‘PRINTFB’ 9119 | PRINTFB(G, FB_Editor, FB_Actions) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘int ExecutiveSetBondSettingFromString(PyMOLGlobals*, int, const char*, const char*, const char*, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11551:28: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 11551 | " Setting: %s set for %d bonds in object \"%s\".\n", | ^~ 11552 | name, nSet, obj->Name ENDF(G); | ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11551:17: note: directive argument in the range [1, 2147483647] 11551 | " Setting: %s set for %d bonds in object \"%s\".\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output between 42 and 560 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11550:15: note: in expansion of macro ‘PRINTF’ 11550 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘PyObject* ExecutiveGetBondSetting(PyMOLGlobals*, int, char*, const char*, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11632:26: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 11632 | " Getting: %s for %d bonds in object \"%s\".\n", | ^~ 11633 | name, nSet, obj->Name ENDF(G); | ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11632:15: note: directive argument in the range [1, 2147483647] 11632 | " Getting: %s for %d bonds in object \"%s\".\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output between 38 and 556 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11631:13: note: in expansion of macro ‘PRINTF’ 11631 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘int ExecutiveSetBondSetting(PyMOLGlobals*, int, PyObject*, const char*, const char*, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11732:62: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size between 208 and 217 [-Wformat-truncation=] 11732 | " Setting: %s set for %d bonds in object \"%s\".\n", | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output 42 or more bytes (assuming 306) into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11731:17: note: in expansion of macro ‘PRINTF’ 11731 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘int ExecutiveUnsetBondSetting(PyMOLGlobals*, int, const char*, const char*, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11811:26: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 11811 | " Setting: %s unset for %d bonds in object \"%s\".\n", | ^~ 11812 | name, nSet, rec->obj->Name ENDF(G); | ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11811:15: note: directive argument in the range [1, 2147483647] 11811 | " Setting: %s unset for %d bonds in object \"%s\".\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output between 44 and 562 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11810:13: note: in expansion of macro ‘PRINTF’ 11810 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘int ExecutiveSetObjSettingFromString(PyMOLGlobals*, int, const char*, pymol::CObject*, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12353:30: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 12353 | " Setting: %s set to %s in object \"%s\", state %d.\n", | ^~ 12354 | name, value2, obj->Name, state + 1 ENDF(G); | ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12353:19: note: directive argument in the range [1, 2147483647] 12353 | " Setting: %s set to %s in object \"%s\", state %d.\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output between 43 and 1584 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12352:17: note: in expansion of macro ‘PRINTF’ 12352 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12345:30: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 12345 | " Setting: %s set to %s in object \"%s\".\n", | ^~ 12346 | name, value2, obj->Name ENDF(G); | ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output between 34 and 1566 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12344:17: note: in expansion of macro ‘PRINTF’ 12344 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12324:29: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 12324 | PRINTF " Setting: %s set to %s.\n", name, value2 ENDF(G); | ^~ ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output between 21 and 1298 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12324:11: note: in expansion of macro ‘PRINTF’ 12324 | PRINTF " Setting: %s set to %s.\n", name, value2 ENDF(G); | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Selector.cpp: In function ‘int SelectorAssignSS(PyMOLGlobals*, int, int, int, int, ObjectMolecule*, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Selector.cpp:1717:70: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 207 [-Wformat-truncation=] 1717 | " AssignSS-Warning: Ignoring incomplete residue /%s/%s/%s/%d%c ...\n", | ^~ In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Selector.cpp:37: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 59 and 324 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Selector.cpp:1716:19: note: in expansion of macro ‘PRINTFB’ 1716 | PRINTFB(G, FB_Selector, FB_Warnings) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘int ExecutiveSetSettingFromString(PyMOLGlobals*, int, const char*, const char*, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12256:36: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 12256 | " Setting: %s set for %d atoms in object \"%s\".\n", | ^~ 12257 | name, op.i4, rec->obj->Name ENDF(G); | ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output between 42 and 561 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12255:23: note: in expansion of macro ‘PRINTF’ 12255 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12224:32: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 12224 | " Setting: %s set to %s in %d objects, state %d.\n", | ^~ 12225 | name, value2, nObj, state + 1 ENDF(G); | ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12224:21: note: directive argument in the range [1, 2147483647] 12224 | " Setting: %s set to %s in %d objects, state %d.\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12224:21: note: directive argument in the range [1, 2147483647] /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output between 43 and 1338 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12223:19: note: in expansion of macro ‘PRINTF’ 12223 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12221:32: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 12221 | " Setting: %s set to %s in %d objects.\n", name, value2, nObj ENDF(G); | ^~ ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12221:21: note: directive argument in the range [1, 2147483647] 12221 | " Setting: %s set to %s in %d objects.\n", name, value2, nObj ENDF(G); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output between 34 and 1320 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12220:19: note: in expansion of macro ‘PRINTF’ 12220 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12288:36: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 12288 | " Setting: %s set to %s in object \"%s\", state %d.\n", | ^~ 12289 | name, value2, rec->obj->Name, state + 1 ENDF(G); | ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12288:25: note: directive argument in the range [1, 2147483647] 12288 | " Setting: %s set to %s in object \"%s\", state %d.\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output between 43 and 1584 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12287:23: note: in expansion of macro ‘PRINTF’ 12287 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12280:36: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 12280 | " Setting: %s set to %s in object \"%s\".\n", | ^~ 12281 | name, value2, rec->obj->Name ENDF(G); | ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output between 34 and 1566 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12279:23: note: in expansion of macro ‘PRINTF’ 12279 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12184:29: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 12184 | PRINTF " Setting: %s set to %s.\n", name, value2 ENDF(G); | ^~ ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output between 21 and 1298 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12184:11: note: in expansion of macro ‘PRINTF’ 12184 | PRINTF " Setting: %s set to %s.\n", name, value2 ENDF(G); | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘bool ExecutiveSetSymmetry(PyMOLGlobals*, pymol::zstring_view, int, const CSymmetry&, bool)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5973:46: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 199 [-Wformat-truncation=] 5973 | " %s-Warning: Cannot set symmetry for '%s' (type %s)\n", __func__, | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 84 and 339 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5972:7: note: in expansion of macro ‘PRINTFB’ 5972 | PRINTFB(G, FB_Executive, FB_Warnings) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5982:43: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 202 [-Wformat-truncation=] 5982 | " %s-Details: Updated symmetry for '%s'\n", __func__, obj->Name ENDFB(G); | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 56 and 311 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5981:7: note: in expansion of macro ‘PRINTFB’ 5981 | PRINTFB(G, FB_Executive, FB_Details) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5973:46: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 199 [-Wformat-truncation=] 5973 | " %s-Warning: Cannot set symmetry for '%s' (type %s)\n", __func__, | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 84 and 339 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5972:7: note: in expansion of macro ‘PRINTFB’ 5972 | PRINTFB(G, FB_Executive, FB_Warnings) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘pymol::Result<> ExecutiveUnsetSetting(PyMOLGlobals*, int, pymol::zstring_view, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12465:68: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 215 [-Wformat-truncation=] 12465 | " Setting: %s unset for %d atoms in object \"%s\".\n", | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output 44 or more bytes (assuming 299) into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12464:21: note: in expansion of macro ‘PRINTF’ 12464 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12487:57: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 227 [-Wformat-truncation=] 12487 | " Setting: %s unset in object \"%s\", state %d.\n", | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12487:25: note: directive argument in the range [1, 2147483647] 12487 | " Setting: %s unset in object \"%s\", state %d.\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output 41 or more bytes (assuming 305) into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12486:23: note: in expansion of macro ‘PRINTF’ 12486 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12481:57: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 227 [-Wformat-truncation=] 12481 | " Setting: %s unset in object \"%s\".\n", | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output 32 or more bytes (assuming 287) into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12480:23: note: in expansion of macro ‘PRINTF’ 12480 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In member function ‘virtual int CExecutive::drag(int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:15625:55: warning: ‘%s’ directive writing up to 1023 bytes into a region of size 1013 [-Wformat-overflow=] 15625 | sprintf(I->ReorderLog, "cmd.order(\"%s\",location=\"%s\")\n", | ^~ 15626 | order_input, (location == -2) ? "upper" : "current"); | ~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:15625:26: note: ‘sprintf’ output between 32 and 1057 bytes into a destination of size 1024 15625 | sprintf(I->ReorderLog, "cmd.order(\"%s\",location=\"%s\")\n", | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 15626 | order_input, (location == -2) ? "upper" : "current"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘pymol::Result<> ExecutiveBond(PyMOLGlobals*, const char*, const char*, int, int, int, pymol::zstring_view)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:9484:67: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size between 200 and 210 [-Wformat-truncation=] 9484 | " Valence: %d bond valences adjusted in model \"%s\".\n", cnt, | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 49 and 314 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:9483:17: note: in expansion of macro ‘PRINTFB’ 9483 | PRINTFB(G, FB_Editor, FB_Actions) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:9496:59: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size between 208 and 218 [-Wformat-truncation=] 9496 | " Unbond: %d bonds removed from model \"%s\".\n", | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 41 and 306 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:9495:17: note: in expansion of macro ‘PRINTFB’ 9495 | PRINTFB(G, FB_Editor, FB_Actions) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:9471:53: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size between 214 and 224 [-Wformat-truncation=] 9471 | " Bond: %d bonds added to model \"%s\".\n", cnt, rec->obj->Name | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 35 and 300 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:9470:17: note: in expansion of macro ‘PRINTFB’ 9470 | PRINTFB(G, FB_Editor, FB_Actions) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘pymol::Result<> ExecutiveSetSetting(PyMOLGlobals*, int, PyObject*, pymol::zstring_view, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12004:70: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 217 [-Wformat-truncation=] 12004 | " Setting: %s set for %d atoms in object \"%s\".\n", | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output 42 or more bytes (assuming 297) into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12003:25: note: in expansion of macro ‘PRINTF’ 12003 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11915:42: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 237 [-Wformat-truncation=] 11915 | " Setting: %s set to %s in %d objects, state %d.\n", | ^~ 11916 | name, value, nObj, state + 1 ENDF(G); | ~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11915:21: note: directive argument in the range [1, 2147483647] 11915 | " Setting: %s set to %s in %d objects, state %d.\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11915:21: note: directive argument in the range [1, 2147483647] /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output 43 or more bytes (assuming 1084) into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11914:19: note: in expansion of macro ‘PRINTF’ 11914 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11912:42: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 237 [-Wformat-truncation=] 11912 | " Setting: %s set to %s in %d objects.\n", name, value, nObj ENDF(G); | ^~ ~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11912:21: note: directive argument in the range [1, 2147483647] 11912 | " Setting: %s set to %s in %d objects.\n", name, value, nObj ENDF(G); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output 34 or more bytes (assuming 1066) into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11911:19: note: in expansion of macro ‘PRINTF’ 11911 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12036:46: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 237 [-Wformat-truncation=] 12036 | " Setting: %s set to %s in object \"%s\", state %d.\n", | ^~ 12037 | name, value, rec->obj->Name, state + 1 ENDF(G); | ~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12036:25: note: directive argument in the range [1, 2147483647] 12036 | " Setting: %s set to %s in object \"%s\", state %d.\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output 43 or more bytes (assuming 1330) into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12035:23: note: in expansion of macro ‘PRINTF’ 12035 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12029:46: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 237 [-Wformat-truncation=] 12029 | " Setting: %s set to %s in object \"%s\".\n", | ^~ 12030 | name, value, rec->obj->Name ENDF(G); | ~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output 34 or more bytes (assuming 1312) into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12028:23: note: in expansion of macro ‘PRINTF’ 12028 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11871:39: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 237 [-Wformat-truncation=] 11871 | PRINTF " Setting: %s set to %s.\n", name, value ENDF(G); | ^~ ~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output 21 or more bytes (assuming 1044) into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11871:11: note: in expansion of macro ‘PRINTF’ 11871 | PRINTF " Setting: %s set to %s.\n", name, value ENDF(G); | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘void ExecutiveManageObject(PyMOLGlobals*, pymol::CObject*, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:14601:37: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 229 [-Wformat-truncation=] 14601 | " Executive-Warning: name \"%s\" collides with a selection language keyword.\n", | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 73 and 328 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:14600:7: note: in expansion of macro ‘PRINTFB’ 14600 | PRINTFB(G, FB_Executive, FB_Warnings) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:14596:36: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 230 [-Wformat-truncation=] 14596 | " Executive: object name \"%s\" is illegal -- renamed to 'all_'.\n", obj->Name | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 61 and 316 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:14595:7: note: in expansion of macro ‘PRINTFB’ 14595 | PRINTFB(G, FB_Executive, FB_Warnings) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:14627:11: warning: ‘char* strcpy(char*, const char*)’ writing between 1 and 256 bytes into a region of size 0 overflows the destination [-Wstringop-overflow=] 14627 | strcpy(rec->name, obj->Name); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~ cc1plus: note: destination object is likely at address zero /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘int ExecutiveGroup(PyMOLGlobals*, pymol::zstring_view, pymol::zstring_view, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:2275:40: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 235 [-Wformat-truncation=] 2275 | " Executive: adding '%s' to group '%s'.\n", rec.name, rec.group_name | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 36 and 546 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:2274:17: note: in expansion of macro ‘PRINTFB’ 2274 | PRINTFB(G, FB_Executive, FB_Actions) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘pymol::Result > ExecutiveSetName(PyMOLGlobals*, pymol::zstring_view, pymol::zstring_view, bool)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:3535:41: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 222 [-Wformat-truncation=] 3535 | " Warning: Invalid characters in '%s' have been replaced or stripped\n", | ^~ 3536 | name ENDFB(G); | ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 67 and 322 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:3534:5: note: in expansion of macro ‘PRINTFB’ 3534 | PRINTFB(G, FB_Executive, FB_Warnings) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘int ExecutiveSetSession(PyMOLGlobals*, PyObject*, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5097:57: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 213 [-Wformat-truncation=] 5097 | " Executive: skipping unrecognized object \"%s\" of type %d.\n", | ^~ In function ‘int ExecutiveSetNamedEntries(PyMOLGlobals*, PyObject*, int, int, int)’, inlined from ‘int ExecutiveSetSession(PyMOLGlobals*, PyObject*, int, int)’ at /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5727:38: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 56 and 321 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5096:11: note: in expansion of macro ‘PRINTFB’ 5096 | PRINTFB(G, FB_Executive, FB_Errors) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘int ExecutiveSetSession(PyMOLGlobals*, PyObject*, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5122:58: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 210 [-Wformat-truncation=] 5122 | "ExectiveSetNamedEntries-Error: after object \"%s\".\n", rec->name ENDFB(G); | ^~ In function ‘int ExecutiveSetNamedEntries(PyMOLGlobals*, PyObject*, int, int, int)’, inlined from ‘int ExecutiveSetSession(PyMOLGlobals*, PyObject*, int, int)’ at /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5727:38: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 49 and 304 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5121:9: note: in expansion of macro ‘PRINTFB’ 5121 | PRINTFB(G, FB_Executive, FB_Errors) | ^~~~~~~ [100%] Linking CXX shared library /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/_cmd.cpython-314-aarch64-linux-gnu.so /usr/bin/cmake -E cmake_link_script CMakeFiles/_cmd.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/_cmd.dir/link.d -Wl,-soname,_cmd.cpython-314-aarch64-linux-gnu.so -o /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/_cmd.cpython-314-aarch64-linux-gnu.so CMakeFiles/_cmd.dir/build/generated/ShaderText.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/avsplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/biomoccaplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/carplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/corplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/crdplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dxplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/grdplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/hash.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/inthash.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/mapplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/netcdfplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/offplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c.o CMakeFiles/_cmd.dir/layer0/Bezier.cpp.o CMakeFiles/_cmd.dir/layer0/Block.cpp.o CMakeFiles/_cmd.dir/layer0/CarveHelper.cpp.o CMakeFiles/_cmd.dir/layer0/ContourSurf.cpp.o CMakeFiles/_cmd.dir/layer0/Crystal.cpp.o CMakeFiles/_cmd.dir/layer0/Err.cpp.o CMakeFiles/_cmd.dir/layer0/Feedback.cpp.o CMakeFiles/_cmd.dir/layer0/Field.cpp.o CMakeFiles/_cmd.dir/layer0/File.cpp.o CMakeFiles/_cmd.dir/layer0/GFXManager.cpp.o CMakeFiles/_cmd.dir/layer0/GenericBuffer.cpp.o CMakeFiles/_cmd.dir/layer0/GraphicsUtil.cpp.o CMakeFiles/_cmd.dir/layer0/Isosurf.cpp.o CMakeFiles/_cmd.dir/layer0/Map.cpp.o CMakeFiles/_cmd.dir/layer0/Match.cpp.o CMakeFiles/_cmd.dir/layer0/Matrix.cpp.o CMakeFiles/_cmd.dir/layer0/MemoryDebug.cpp.o CMakeFiles/_cmd.dir/layer0/MemoryUsage.cpp.o CMakeFiles/_cmd.dir/layer0/MyPNG.cpp.o CMakeFiles/_cmd.dir/layer0/Parse.cpp.o CMakeFiles/_cmd.dir/layer0/Pixmap.cpp.o CMakeFiles/_cmd.dir/layer0/PostProcess.cpp.o CMakeFiles/_cmd.dir/layer0/PrintUtils.cpp.o CMakeFiles/_cmd.dir/layer0/ShaderMgr.cpp.o CMakeFiles/_cmd.dir/layer0/ShaderPreprocessor.cpp.o CMakeFiles/_cmd.dir/layer0/ShaderPrg.cpp.o CMakeFiles/_cmd.dir/layer0/Sphere.cpp.o CMakeFiles/_cmd.dir/layer0/TTT.cpp.o CMakeFiles/_cmd.dir/layer0/Tetsurf.cpp.o CMakeFiles/_cmd.dir/layer0/Texture.cpp.o CMakeFiles/_cmd.dir/layer0/Tracker.cpp.o CMakeFiles/_cmd.dir/layer0/Triangle.cpp.o CMakeFiles/_cmd.dir/layer0/Util.cpp.o CMakeFiles/_cmd.dir/layer0/Util2.cpp.o CMakeFiles/_cmd.dir/layer0/Vector.cpp.o CMakeFiles/_cmd.dir/layer0/Word.cpp.o CMakeFiles/_cmd.dir/layer0/ccealignmodule.cpp.o CMakeFiles/_cmd.dir/layer0/marching_cubes.cpp.o CMakeFiles/_cmd.dir/layer0/os_gl.cpp.o CMakeFiles/_cmd.dir/layer1/Basis.cpp.o CMakeFiles/_cmd.dir/layer1/ButMode.cpp.o CMakeFiles/_cmd.dir/layer1/CGO.cpp.o CMakeFiles/_cmd.dir/layer1/CGOGL.cpp.o CMakeFiles/_cmd.dir/layer1/CGORenderer.cpp.o CMakeFiles/_cmd.dir/layer1/COLLADA.cpp.o CMakeFiles/_cmd.dir/layer1/Camera.cpp.o CMakeFiles/_cmd.dir/layer1/Character.cpp.o CMakeFiles/_cmd.dir/layer1/Color.cpp.o CMakeFiles/_cmd.dir/layer1/Control.cpp.o CMakeFiles/_cmd.dir/layer1/Extrude.cpp.o CMakeFiles/_cmd.dir/layer1/Font.cpp.o CMakeFiles/_cmd.dir/layer1/FontGLUT.cpp.o CMakeFiles/_cmd.dir/layer1/FontGLUT8x13.cpp.o CMakeFiles/_cmd.dir/layer1/FontGLUT9x15.cpp.o CMakeFiles/_cmd.dir/layer1/FontGLUTHel10.cpp.o CMakeFiles/_cmd.dir/layer1/FontGLUTHel12.cpp.o CMakeFiles/_cmd.dir/layer1/FontGLUTHel18.cpp.o CMakeFiles/_cmd.dir/layer1/FontType.cpp.o CMakeFiles/_cmd.dir/layer1/ImageUtils.cpp.o CMakeFiles/_cmd.dir/layer1/Movie.cpp.o CMakeFiles/_cmd.dir/layer1/Ortho.cpp.o CMakeFiles/_cmd.dir/layer1/P.cpp.o CMakeFiles/_cmd.dir/layer1/PConv.cpp.o CMakeFiles/_cmd.dir/layer1/Picking.cpp.o CMakeFiles/_cmd.dir/layer1/Pop.cpp.o CMakeFiles/_cmd.dir/layer1/PyMOLObject.cpp.o CMakeFiles/_cmd.dir/layer1/Ray.cpp.o CMakeFiles/_cmd.dir/layer1/Rep.cpp.o CMakeFiles/_cmd.dir/layer1/Scene.cpp.o CMakeFiles/_cmd.dir/layer1/SceneMouse.cpp.o CMakeFiles/_cmd.dir/layer1/ScenePicking.cpp.o CMakeFiles/_cmd.dir/layer1/SceneRay.cpp.o CMakeFiles/_cmd.dir/layer1/SceneRender.cpp.o CMakeFiles/_cmd.dir/layer1/SceneView.cpp.o CMakeFiles/_cmd.dir/layer1/ScrollBar.cpp.o CMakeFiles/_cmd.dir/layer1/Seq.cpp.o CMakeFiles/_cmd.dir/layer1/Setting.cpp.o CMakeFiles/_cmd.dir/layer1/Shaker.cpp.o CMakeFiles/_cmd.dir/layer1/SymOp.cpp.o CMakeFiles/_cmd.dir/layer1/SymOpPConv.cpp.o CMakeFiles/_cmd.dir/layer1/SymOpTools.cpp.o CMakeFiles/_cmd.dir/layer1/Symmetry.cpp.o CMakeFiles/_cmd.dir/layer1/Text.cpp.o CMakeFiles/_cmd.dir/layer1/TypeFace.cpp.o CMakeFiles/_cmd.dir/layer1/View.cpp.o CMakeFiles/_cmd.dir/layer1/Wizard.cpp.o CMakeFiles/_cmd.dir/layer2/AssemblyHelpers.cpp.o CMakeFiles/_cmd.dir/layer2/AtomInfo.cpp.o CMakeFiles/_cmd.dir/layer2/AtomInfoHistory.cpp.o CMakeFiles/_cmd.dir/layer2/BondTypeHistory.cpp.o CMakeFiles/_cmd.dir/layer2/CifFile.cpp.o CMakeFiles/_cmd.dir/layer2/CifMoleculeReader.cpp.o CMakeFiles/_cmd.dir/layer2/CoordSet.cpp.o CMakeFiles/_cmd.dir/layer2/DistSet.cpp.o CMakeFiles/_cmd.dir/layer2/GadgetSet.cpp.o CMakeFiles/_cmd.dir/layer2/HydrogenAdder.cpp.o CMakeFiles/_cmd.dir/layer2/MmodTyping.cpp.o CMakeFiles/_cmd.dir/layer2/MmtfMoleculeReader.cpp.o CMakeFiles/_cmd.dir/layer2/Mol2Typing.cpp.o CMakeFiles/_cmd.dir/layer2/MolV3000.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectAlignment.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectCGO.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectCallback.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectCurve.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectDist.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectGadget.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectGadgetRamp.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectGroup.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectMap.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectMesh.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectMolecule.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectMolecule2.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectMolecule3.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectSlice.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectSurface.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectVolume.cpp.o CMakeFiles/_cmd.dir/layer2/RepAngle.cpp.o CMakeFiles/_cmd.dir/layer2/RepCartoon.cpp.o CMakeFiles/_cmd.dir/layer2/RepCylBond.cpp.o CMakeFiles/_cmd.dir/layer2/RepDihedral.cpp.o CMakeFiles/_cmd.dir/layer2/RepDistDash.cpp.o CMakeFiles/_cmd.dir/layer2/RepDistLabel.cpp.o CMakeFiles/_cmd.dir/layer2/RepDot.cpp.o CMakeFiles/_cmd.dir/layer2/RepEllipsoid.cpp.o CMakeFiles/_cmd.dir/layer2/RepLabel.cpp.o CMakeFiles/_cmd.dir/layer2/RepMesh.cpp.o CMakeFiles/_cmd.dir/layer2/RepNonbonded.cpp.o CMakeFiles/_cmd.dir/layer2/RepNonbondedSphere.cpp.o CMakeFiles/_cmd.dir/layer2/RepRibbon.cpp.o CMakeFiles/_cmd.dir/layer2/RepSphere.cpp.o CMakeFiles/_cmd.dir/layer2/RepSphereGenerate.cpp.o CMakeFiles/_cmd.dir/layer2/RepSphereImmediate.cpp.o CMakeFiles/_cmd.dir/layer2/RepSurface.cpp.o CMakeFiles/_cmd.dir/layer2/RepWireBond.cpp.o CMakeFiles/_cmd.dir/layer2/Sculpt.cpp.o CMakeFiles/_cmd.dir/layer2/SculptCache.cpp.o CMakeFiles/_cmd.dir/layer2/SideChainHelper.cpp.o CMakeFiles/_cmd.dir/layer2/VFont.cpp.o CMakeFiles/_cmd.dir/layer3/AtomIterators.cpp.o CMakeFiles/_cmd.dir/layer3/CifDataValueFormatter.cpp.o CMakeFiles/_cmd.dir/layer3/Editor.cpp.o CMakeFiles/_cmd.dir/layer3/Executive.cpp.o CMakeFiles/_cmd.dir/layer3/ExecutivePython.cpp.o CMakeFiles/_cmd.dir/layer3/Interactions.cpp.o CMakeFiles/_cmd.dir/layer3/MaeExportHelpers.cpp.o CMakeFiles/_cmd.dir/layer3/MoleculeExporter.cpp.o CMakeFiles/_cmd.dir/layer3/MovieScene.cpp.o CMakeFiles/_cmd.dir/layer3/PlugIOManager.cpp.o CMakeFiles/_cmd.dir/layer3/RingFinder.cpp.o CMakeFiles/_cmd.dir/layer3/Seeker.cpp.o CMakeFiles/_cmd.dir/layer3/Selector.cpp.o CMakeFiles/_cmd.dir/layer3/SelectorTmp.cpp.o CMakeFiles/_cmd.dir/layer3/SpecRec.cpp.o CMakeFiles/_cmd.dir/layer3/SpecRecSpecial.cpp.o CMakeFiles/_cmd.dir/layer4/Cmd.cpp.o CMakeFiles/_cmd.dir/layer4/Menu.cpp.o CMakeFiles/_cmd.dir/layer4/PopUp.cpp.o CMakeFiles/_cmd.dir/layer5/PyMOL.cpp.o CMakeFiles/_cmd.dir/layer5/TestPyMOL.cpp.o CMakeFiles/_cmd.dir/layer5/main.cpp.o CMakeFiles/_cmd.dir/ov/src/OVContext.cpp.o CMakeFiles/_cmd.dir/ov/src/OVHeap.cpp.o CMakeFiles/_cmd.dir/ov/src/OVHeapArray.cpp.o CMakeFiles/_cmd.dir/ov/src/OVLexicon.cpp.o CMakeFiles/_cmd.dir/ov/src/OVOneToAny.cpp.o CMakeFiles/_cmd.dir/ov/src/OVOneToOne.cpp.o CMakeFiles/_cmd.dir/ov/src/OVRandom.cpp.o CMakeFiles/_cmd.dir/ov/src/ov_utility.cpp.o -lpng -lfreetype -lxml2 -lGL -lGLEW -lnetcdf -fopenmp gmake[3]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd' [100%] Built target _cmd gmake[2]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd/CMakeFiles 0 gmake[1]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd' cmake /build/reproducible-path/pymol-3.1.0+dfsg -DTARGET_NAME=_champ -DCMAKE_LIBRARY_OUTPUT_DIRECTORY=/build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/champ -DCMAKE_BUILD_TYPE=Release -DALL_INC_DIR=contrib/champ;/usr/include/python3.14;/usr/include/python3.14; -DALL_SRC=contrib/champ/champ.c;contrib/champ/champ_module.c;contrib/champ/chiral.c;contrib/champ/err2.c;contrib/champ/feedback2.c;contrib/champ/list.c;contrib/champ/os_memory.c;contrib/champ/sort.c;contrib/champ/strblock.c;contrib/champ/vla.c; -DALL_DEF= -DALL_LIB_DIR=/usr/lib; -DALL_LIB= -DALL_COMP_ARGS= -DALL_EXT_LINK= -DSHARED_SUFFIX=.cpython-314-aarch64-linux-gnu.so -- The C compiler identification is GNU 15.2.0 -- The CXX compiler identification is GNU 15.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Configuring done (0.8s) -- Generating done (0.0s) -- Build files have been written to: /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_champ cmake --build . --config Release -j12 gmake[1]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_champ' /usr/bin/cmake -S/build/reproducible-path/pymol-3.1.0+dfsg -B/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_champ --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_champ/CMakeFiles /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_champ//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[2]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_champ' /usr/bin/gmake -f CMakeFiles/_champ.dir/build.make CMakeFiles/_champ.dir/depend gmake[3]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_champ' cd /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_champ && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/pymol-3.1.0+dfsg /build/reproducible-path/pymol-3.1.0+dfsg /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_champ /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_champ /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_champ/CMakeFiles/_champ.dir/DependInfo.cmake "--color=" _champ gmake[3]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_champ' /usr/bin/gmake -f CMakeFiles/_champ.dir/build.make CMakeFiles/_champ.dir/build gmake[3]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_champ' [ 18%] Building C object CMakeFiles/_champ.dir/contrib/champ/champ_module.c.o [ 18%] Building C object CMakeFiles/_champ.dir/contrib/champ/champ.c.o [ 27%] Building C object CMakeFiles/_champ.dir/contrib/champ/err2.c.o [ 36%] Building C object CMakeFiles/_champ.dir/contrib/champ/feedback2.c.o /usr/bin/cc -D_champ_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/champ -I/usr/include/python3.14 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -MD -MT CMakeFiles/_champ.dir/contrib/champ/champ.c.o -MF CMakeFiles/_champ.dir/contrib/champ/champ.c.o.d -o CMakeFiles/_champ.dir/contrib/champ/champ.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/champ/champ.c [ 45%] Building C object CMakeFiles/_champ.dir/contrib/champ/chiral.c.o [ 54%] Building C object CMakeFiles/_champ.dir/contrib/champ/list.c.o /usr/bin/cc -D_champ_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/champ -I/usr/include/python3.14 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -MD -MT CMakeFiles/_champ.dir/contrib/champ/champ_module.c.o -MF CMakeFiles/_champ.dir/contrib/champ/champ_module.c.o.d -o CMakeFiles/_champ.dir/contrib/champ/champ_module.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/champ/champ_module.c /usr/bin/cc -D_champ_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/champ -I/usr/include/python3.14 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -MD -MT CMakeFiles/_champ.dir/contrib/champ/chiral.c.o -MF CMakeFiles/_champ.dir/contrib/champ/chiral.c.o.d -o CMakeFiles/_champ.dir/contrib/champ/chiral.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/champ/chiral.c [ 63%] Building C object CMakeFiles/_champ.dir/contrib/champ/os_memory.c.o /usr/bin/cc -D_champ_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/champ -I/usr/include/python3.14 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -MD -MT CMakeFiles/_champ.dir/contrib/champ/err2.c.o -MF CMakeFiles/_champ.dir/contrib/champ/err2.c.o.d -o CMakeFiles/_champ.dir/contrib/champ/err2.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/champ/err2.c /usr/bin/cc -D_champ_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/champ -I/usr/include/python3.14 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -MD -MT CMakeFiles/_champ.dir/contrib/champ/feedback2.c.o -MF CMakeFiles/_champ.dir/contrib/champ/feedback2.c.o.d -o CMakeFiles/_champ.dir/contrib/champ/feedback2.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/champ/feedback2.c /usr/bin/cc -D_champ_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/champ -I/usr/include/python3.14 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -MD -MT CMakeFiles/_champ.dir/contrib/champ/list.c.o -MF CMakeFiles/_champ.dir/contrib/champ/list.c.o.d -o CMakeFiles/_champ.dir/contrib/champ/list.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/champ/list.c [ 72%] Building C object CMakeFiles/_champ.dir/contrib/champ/sort.c.o [ 90%] Building C object CMakeFiles/_champ.dir/contrib/champ/vla.c.o [ 90%] Building C object CMakeFiles/_champ.dir/contrib/champ/strblock.c.o /usr/bin/cc -D_champ_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/champ -I/usr/include/python3.14 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -MD -MT CMakeFiles/_champ.dir/contrib/champ/os_memory.c.o -MF CMakeFiles/_champ.dir/contrib/champ/os_memory.c.o.d -o CMakeFiles/_champ.dir/contrib/champ/os_memory.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/champ/os_memory.c /usr/bin/cc -D_champ_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/champ -I/usr/include/python3.14 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -MD -MT CMakeFiles/_champ.dir/contrib/champ/sort.c.o -MF CMakeFiles/_champ.dir/contrib/champ/sort.c.o.d -o CMakeFiles/_champ.dir/contrib/champ/sort.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/champ/sort.c /usr/bin/cc -D_champ_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/champ -I/usr/include/python3.14 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -MD -MT CMakeFiles/_champ.dir/contrib/champ/vla.c.o -MF CMakeFiles/_champ.dir/contrib/champ/vla.c.o.d -o CMakeFiles/_champ.dir/contrib/champ/vla.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/champ/vla.c /usr/bin/cc -D_champ_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/champ -I/usr/include/python3.14 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -MD -MT CMakeFiles/_champ.dir/contrib/champ/strblock.c.o -MF CMakeFiles/_champ.dir/contrib/champ/strblock.c.o.d -o CMakeFiles/_champ.dir/contrib/champ/strblock.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/champ/strblock.c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/champ/os_memory.c: In function ‘OSMemoryZero’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/champ/os_memory.c:55:18: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] 55 | while(count&&(((int)p)&mask)) { | ^ [100%] Linking C shared library /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/champ/_champ.cpython-314-aarch64-linux-gnu.so /usr/bin/cmake -E cmake_link_script CMakeFiles/_champ.dir/link.txt --verbose=1 /usr/bin/cc -fPIC -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/_champ.dir/link.d -Wl,-soname,_champ.cpython-314-aarch64-linux-gnu.so -o /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/champ/_champ.cpython-314-aarch64-linux-gnu.so CMakeFiles/_champ.dir/contrib/champ/champ.c.o CMakeFiles/_champ.dir/contrib/champ/champ_module.c.o CMakeFiles/_champ.dir/contrib/champ/chiral.c.o CMakeFiles/_champ.dir/contrib/champ/err2.c.o CMakeFiles/_champ.dir/contrib/champ/feedback2.c.o CMakeFiles/_champ.dir/contrib/champ/list.c.o CMakeFiles/_champ.dir/contrib/champ/os_memory.c.o CMakeFiles/_champ.dir/contrib/champ/sort.c.o CMakeFiles/_champ.dir/contrib/champ/strblock.c.o CMakeFiles/_champ.dir/contrib/champ/vla.c.o gmake[3]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_champ' [100%] Built target _champ gmake[2]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_champ' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_champ/CMakeFiles 0 gmake[1]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_champ' I: pybuild base:385: /usr/bin/python3 setup.py build /usr/lib/python3/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated !! ******************************************************************************** Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). This deprecation is overdue, please update your project and remove deprecated calls to avoid build errors in the future. See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! corresp(dist, value, root_dir) running build running build_py creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/morphing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/computing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/seqalign.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/keyboard.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/shortcut.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/util.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/xwin.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/wizarding.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/diagnosing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/helping.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/povray.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/controlling.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/fitting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/preset.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/checking.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/querying.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/callback.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/parsing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/moving.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/editor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/shortcut_dict.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/internal.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/selector.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/viewing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/save_shortcut.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/completing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/selecting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/keywords.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/cgo.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/headering.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/movie.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/colorramping.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/cmd.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/invocation.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/colorprinting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/api.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/menu.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/editing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/rpc.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/cgobuilder.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/experimenting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/parser.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/mpeg_encode.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/__main__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/creating.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/setting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/shortcut_manager.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/_gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/locking.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/exporting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/constants.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/xray.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/externing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/lazyio.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/monitoring.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/pymolhttpd.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/feedingback.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/constants_palette.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/importing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/commanding.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/vfont.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol2 copying modules/pymol2/cmd2.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol2 copying modules/pymol2/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol2 creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt copying modules/pmg_qt/file_dialogs.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt copying modules/pmg_qt/shortcut_menu_gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt copying modules/pmg_qt/advanced_settings_gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt copying modules/pmg_qt/scene_bin_gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt copying modules/pmg_qt/pymol_gl_widget.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt copying modules/pmg_qt/volume.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt copying modules/pmg_qt/properties_dialog.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt copying modules/pmg_qt/builder.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt copying modules/pmg_qt/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt copying modules/pmg_qt/mimic_pmg_tk.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt copying modules/pmg_qt/mimic_tk.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt copying modules/pmg_qt/keymapping.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt copying modules/pmg_qt/TextEditor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt copying modules/pmg_qt/pymol_qt_gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk copying modules/pmg_tk/SetEditor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk copying modules/pmg_tk/PMGApp.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk copying modules/pmg_tk/volume.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk copying modules/pmg_tk/PyMOLMapLoad.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk copying modules/pmg_tk/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk copying modules/pmg_tk/ColorEditor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk copying modules/pmg_tk/TextEditor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk copying modules/pmg_tk/Setting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk copying modules/pmg_tk/Demo.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/place.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/bond_mmff.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/protein_residues.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/charge.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/mae.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/protein_amber99.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/water_residues.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/xyz.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/arc.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/pkl.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/gms.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/io.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/dictdb.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/lst.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/cif.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/mass.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/protein_amber.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/sdf.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/models.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/map.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/cc1.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/gamess1.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/bonds.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/water_amber.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/pdb.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/cpv.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/mol2.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/mol.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/brick.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/hetatm.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/bond_amber.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/solvate.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/neighbor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/mmd.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/protein.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/protein_mmff.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard copying modules/pymol/wizard/sculpting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard copying modules/pymol/wizard/filter.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard copying modules/pymol/wizard/dragging.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard copying modules/pymol/wizard/nucmutagenesis.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard copying modules/pymol/wizard/charge.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard copying modules/pymol/wizard/distance.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard copying modules/pymol/wizard/command.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard copying modules/pymol/wizard/toggle.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard copying modules/pymol/wizard/message.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard copying modules/pymol/wizard/label.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard copying modules/pymol/wizard/cleanup.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard copying modules/pymol/wizard/density.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard copying modules/pymol/wizard/pair_fit.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard copying modules/pymol/wizard/benchmark.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard copying modules/pymol/wizard/box.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard copying modules/pymol/wizard/annotation.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard copying modules/pymol/wizard/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard copying modules/pymol/wizard/renaming.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard copying modules/pymol/wizard/measurement.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard copying modules/pymol/wizard/mutagenesis.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard copying modules/pymol/wizard/pseudoatom.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard copying modules/pymol/wizard/appearance.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard copying modules/pymol/wizard/openvr.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard copying modules/pymol/wizard/stereodemo.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard copying modules/pymol/wizard/demo.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard copying modules/pymol/wizard/security.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/plugins copying modules/pymol/plugins/repository.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/plugins copying modules/pymol/plugins/installation.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/plugins copying modules/pymol/plugins/legacysupport.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/plugins copying modules/pymol/plugins/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/plugins copying modules/pymol/plugins/managergui_qt.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/plugins copying modules/pymol/plugins/managergui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/plugins creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/Qt copying modules/pymol/Qt/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/Qt copying modules/pymol/Qt/utils.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/Qt creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/stereochemistry copying modules/pymol/stereochemistry/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/stereochemistry creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/syntax copying modules/pmg_qt/syntax/pmlparser.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/syntax copying modules/pmg_qt/syntax/python.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/syntax copying modules/pmg_qt/syntax/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/syntax copying modules/pmg_qt/syntax/pml.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/syntax creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/web/examples copying modules/web/examples/justhttpd.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/web/examples copying modules/web/examples/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/web/examples creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/skins copying modules/pmg_tk/skins/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/skins creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/startup copying modules/pmg_tk/startup/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/startup creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/skins/normal copying modules/pmg_tk/skins/normal/ModalWindow.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/skins/normal copying modules/pmg_tk/skins/normal/builder.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/skins/normal copying modules/pmg_tk/skins/normal/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/skins/normal creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/skins/demo copying modules/pmg_tk/skins/demo/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/skins/demo creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/fast copying modules/chempy/fast/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/fast creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/bmin copying modules/chempy/bmin/util.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/bmin copying modules/chempy/bmin/state.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/bmin copying modules/chempy/bmin/realtime.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/bmin copying modules/chempy/bmin/commands.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/bmin copying modules/chempy/bmin/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/bmin creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/tinker copying modules/chempy/tinker/amber.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/tinker copying modules/chempy/tinker/state.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/tinker copying modules/chempy/tinker/realtime.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/tinker copying modules/chempy/tinker/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/tinker copying modules/chempy/tinker/keyword.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/tinker creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/mmtf copying modules/chempy/mmtf/io.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/mmtf copying modules/chempy/mmtf/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/mmtf creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/champ copying modules/chempy/champ/assign.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/champ copying modules/chempy/champ/amber99.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/champ copying modules/chempy/champ/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/champ copying modules/chempy/champ/formal_charges.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/champ creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/fragments copying modules/chempy/fragments/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/fragments running egg_info writing modules/pymol.egg-info/PKG-INFO /usr/lib/python3/dist-packages/setuptools/_core_metadata.py:163: SetuptoolsDeprecationWarning: Invalid config. !! ******************************************************************************** newlines are not allowed in `summary` and will break in the future ******************************************************************************** !! write_field('Summary', single_line(summary)) writing dependency_links to modules/pymol.egg-info/dependency_links.txt writing entry points to modules/pymol.egg-info/entry_points.txt writing requirements to modules/pymol.egg-info/requires.txt writing top-level names to modules/pymol.egg-info/top_level.txt reading manifest file 'modules/pymol.egg-info/SOURCES.txt' adding license file 'LICENSE' adding license file 'AUTHORS' writing manifest file 'modules/pymol.egg-info/SOURCES.txt' copying modules/pmg_qt/forms/render.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/save_object.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/create_shortcut.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/change_confirm.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/load_aln.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/load_traj.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/png.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/load_map.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/shortcut_menu.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/colors.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/pluginitem.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/props.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/askpartial.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/fetch.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/load_mae.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/load_mtz.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/save_molecule.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/pluginmanager.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/movieexport.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/help_shortcut.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms running build_ext cmake /build/reproducible-path/pymol-3.1.0+dfsg -DTARGET_NAME=_cmd -DCMAKE_LIBRARY_OUTPUT_DIRECTORY=/build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol -DCMAKE_BUILD_TYPE=Release -DALL_INC_DIR=include;contrib/uiuc/plugins/include;ov/src;layer0;layer1;layer2;layer3;layer4;layer5;build/generated;contrib/uiuc/plugins/molfile_plugin/src;/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include;/usr/include;/usr/include/freetype2;/usr/include/libxml2;/usr/include/python3.13;/usr/include/python3.13; -DALL_SRC=build/generated/ShaderText.cpp;contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c;contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c;contrib/uiuc/plugins/molfile_plugin/src/avsplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.c;contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c;contrib/uiuc/plugins/molfile_plugin/src/biomoccaplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/carplugin.c;contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/corplugin.c;contrib/uiuc/plugins/molfile_plugin/src/crdplugin.c;contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c;contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c;contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/dxplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c;contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/grdplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/hash.c;contrib/uiuc/plugins/molfile_plugin/src/inthash.c;contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c;contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/mapplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c;contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c;contrib/uiuc/plugins/molfile_plugin/src/netcdfplugin.c;contrib/uiuc/plugins/molfile_plugin/src/offplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c;contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c;contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c;contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c;contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c;contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c;layer0/Bezier.cpp;layer0/Block.cpp;layer0/CarveHelper.cpp;layer0/ContourSurf.cpp;layer0/Crystal.cpp;layer0/Err.cpp;layer0/Feedback.cpp;layer0/Field.cpp;layer0/File.cpp;layer0/GFXManager.cpp;layer0/GenericBuffer.cpp;layer0/GraphicsUtil.cpp;layer0/Isosurf.cpp;layer0/Map.cpp;layer0/Match.cpp;layer0/Matrix.cpp;layer0/MemoryDebug.cpp;layer0/MemoryUsage.cpp;layer0/MyPNG.cpp;layer0/Parse.cpp;layer0/Pixmap.cpp;layer0/PostProcess.cpp;layer0/PrintUtils.cpp;layer0/ShaderMgr.cpp;layer0/ShaderPreprocessor.cpp;layer0/ShaderPrg.cpp;layer0/Sphere.cpp;layer0/TTT.cpp;layer0/Tetsurf.cpp;layer0/Texture.cpp;layer0/Tracker.cpp;layer0/Triangle.cpp;layer0/Util.cpp;layer0/Util2.cpp;layer0/Vector.cpp;layer0/Word.cpp;layer0/ccealignmodule.cpp;layer0/marching_cubes.cpp;layer0/os_gl.cpp;layer1/Basis.cpp;layer1/ButMode.cpp;layer1/CGO.cpp;layer1/CGOGL.cpp;layer1/CGORenderer.cpp;layer1/COLLADA.cpp;layer1/Camera.cpp;layer1/Character.cpp;layer1/Color.cpp;layer1/Control.cpp;layer1/Extrude.cpp;layer1/Font.cpp;layer1/FontGLUT.cpp;layer1/FontGLUT8x13.cpp;layer1/FontGLUT9x15.cpp;layer1/FontGLUTHel10.cpp;layer1/FontGLUTHel12.cpp;layer1/FontGLUTHel18.cpp;layer1/FontType.cpp;layer1/ImageUtils.cpp;layer1/Movie.cpp;layer1/Ortho.cpp;layer1/P.cpp;layer1/PConv.cpp;layer1/Picking.cpp;layer1/Pop.cpp;layer1/PyMOLObject.cpp;layer1/Ray.cpp;layer1/Rep.cpp;layer1/Scene.cpp;layer1/SceneMouse.cpp;layer1/ScenePicking.cpp;layer1/SceneRay.cpp;layer1/SceneRender.cpp;layer1/SceneView.cpp;layer1/ScrollBar.cpp;layer1/Seq.cpp;layer1/Setting.cpp;layer1/Shaker.cpp;layer1/SymOp.cpp;layer1/SymOpPConv.cpp;layer1/SymOpTools.cpp;layer1/Symmetry.cpp;layer1/Text.cpp;layer1/TypeFace.cpp;layer1/View.cpp;layer1/Wizard.cpp;layer2/AssemblyHelpers.cpp;layer2/AtomInfo.cpp;layer2/AtomInfoHistory.cpp;layer2/BondTypeHistory.cpp;layer2/CifFile.cpp;layer2/CifMoleculeReader.cpp;layer2/CoordSet.cpp;layer2/DistSet.cpp;layer2/GadgetSet.cpp;layer2/HydrogenAdder.cpp;layer2/MmodTyping.cpp;layer2/MmtfMoleculeReader.cpp;layer2/Mol2Typing.cpp;layer2/MolV3000.cpp;layer2/ObjectAlignment.cpp;layer2/ObjectCGO.cpp;layer2/ObjectCallback.cpp;layer2/ObjectCurve.cpp;layer2/ObjectDist.cpp;layer2/ObjectGadget.cpp;layer2/ObjectGadgetRamp.cpp;layer2/ObjectGroup.cpp;layer2/ObjectMap.cpp;layer2/ObjectMesh.cpp;layer2/ObjectMolecule.cpp;layer2/ObjectMolecule2.cpp;layer2/ObjectMolecule3.cpp;layer2/ObjectSlice.cpp;layer2/ObjectSurface.cpp;layer2/ObjectVolume.cpp;layer2/RepAngle.cpp;layer2/RepCartoon.cpp;layer2/RepCylBond.cpp;layer2/RepDihedral.cpp;layer2/RepDistDash.cpp;layer2/RepDistLabel.cpp;layer2/RepDot.cpp;layer2/RepEllipsoid.cpp;layer2/RepLabel.cpp;layer2/RepMesh.cpp;layer2/RepNonbonded.cpp;layer2/RepNonbondedSphere.cpp;layer2/RepRibbon.cpp;layer2/RepSphere.cpp;layer2/RepSphereGenerate.cpp;layer2/RepSphereImmediate.cpp;layer2/RepSurface.cpp;layer2/RepWireBond.cpp;layer2/Sculpt.cpp;layer2/SculptCache.cpp;layer2/SideChainHelper.cpp;layer2/VFont.cpp;layer3/AtomIterators.cpp;layer3/CifDataValueFormatter.cpp;layer3/Editor.cpp;layer3/Executive.cpp;layer3/ExecutivePython.cpp;layer3/Interactions.cpp;layer3/MaeExportHelpers.cpp;layer3/MoleculeExporter.cpp;layer3/MovieScene.cpp;layer3/PlugIOManager.cpp;layer3/RingFinder.cpp;layer3/Seeker.cpp;layer3/Selector.cpp;layer3/SelectorTmp.cpp;layer3/SpecRec.cpp;layer3/SpecRecSpecial.cpp;layer4/Cmd.cpp;layer4/Menu.cpp;layer4/PopUp.cpp;layer5/PyMOL.cpp;layer5/TestPyMOL.cpp;layer5/main.cpp;ov/src/OVContext.cpp;ov/src/OVHeap.cpp;ov/src/OVHeapArray.cpp;ov/src/OVLexicon.cpp;ov/src/OVOneToAny.cpp;ov/src/OVOneToOne.cpp;ov/src/OVRandom.cpp;ov/src/ov_utility.cpp; -DALL_DEF=_PYMOL_LIBPNG;_PYMOL_FREETYPE;PYMOL_OPENMP;_PYMOL_VMD_PLUGINS;_HAVE_LIBXML;_PYMOL_NO_MSGPACKC;_PYMOL_NO_MAIN;_PYMOL_NUMPY; -DALL_LIB_DIR=/usr/lib; -DALL_LIB=png;freetype;xml2;GL;GLEW;netcdf; -DALL_COMP_ARGS=-Werror=return-type;-Wunused-variable;-Wno-switch;-Wno-narrowing;-Wno-char-subscripts;-O3;-fopenmp; -DALL_EXT_LINK=-fopenmp -DSHARED_SUFFIX=.cpython-313-aarch64-linux-gnu.so -- The C compiler identification is GNU 15.2.0 -- The CXX compiler identification is GNU 15.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Configuring done (0.9s) -- Generating done (0.1s) -- Build files have been written to: /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd cmake --build . --config Release -j12 gmake[1]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd' /usr/bin/cmake -S/build/reproducible-path/pymol-3.1.0+dfsg -B/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd/CMakeFiles /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[2]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd' /usr/bin/gmake -f CMakeFiles/_cmd.dir/build.make CMakeFiles/_cmd.dir/depend gmake[3]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd' cd /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/pymol-3.1.0+dfsg /build/reproducible-path/pymol-3.1.0+dfsg /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd/CMakeFiles/_cmd.dir/DependInfo.cmake "--color=" _cmd gmake[3]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd' /usr/bin/gmake -f CMakeFiles/_cmd.dir/build.make CMakeFiles/_cmd.dir/build gmake[3]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd' [ 0%] Building CXX object CMakeFiles/_cmd.dir/build/generated/ShaderText.cpp.o [ 0%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c [ 0%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/build/generated/ShaderText.cpp.o -MF CMakeFiles/_cmd.dir/build/generated/ShaderText.cpp.o.d -o CMakeFiles/_cmd.dir/build/generated/ShaderText.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/build/generated/ShaderText.cpp [ 0%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c.o [ 1%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c.o [ 2%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/biomoccaplugin.cpp.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp [ 2%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/avsplugin.cpp.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/biomoccaplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/biomoccaplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/biomoccaplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/biomoccaplugin.cpp [ 3%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.c.o [ 3%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.c /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/avsplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/avsplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/avsplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/avsplugin.cpp /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp [ 3%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp.o [ 4%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/corplugin.c.o [ 5%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/carplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/carplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/carplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/carplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/carplugin.c /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/corplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/corplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/corplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/corplugin.c [ 5%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/crdplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/crdplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/crdplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/crdplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/crdplugin.c [ 5%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp [ 6%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c [ 6%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c [ 7%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp [ 7%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp [ 8%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dxplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dxplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dxplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dxplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dxplugin.cpp [ 8%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp [ 8%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp [ 9%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c [ 9%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp [ 10%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/grdplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/grdplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/grdplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/grdplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/grdplugin.cpp [ 10%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp [ 10%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp [ 11%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/hash.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/hash.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/hash.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/hash.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/hash.c [ 11%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/inthash.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/inthash.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/inthash.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/inthash.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/inthash.c [ 12%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c [ 12%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp [ 13%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/mapplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/mapplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/mapplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/mapplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/mapplugin.cpp [ 13%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp [ 13%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp [ 14%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c [ 14%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp [ 15%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.cpp [ 15%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c [ 16%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/netcdfplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/netcdfplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/netcdfplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/netcdfplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/netcdfplugin.c [ 16%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/offplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/offplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/offplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/offplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/offplugin.cpp [ 16%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp [ 17%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp [ 17%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp [ 18%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c [ 18%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp: In function ‘int {anonymous}::write_structure(void*, int, const molfile_atom_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp:1904:9: warning: unused variable ‘last_ctnumber’ [-Wunused-variable] 1904 | int last_ctnumber = -1; | ^~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp: In function ‘int getUniqueResID(char*, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:443:7: warning: unused variable ‘i’ [-Wunused-variable] 443 | int i, uid; | ^ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp: In function ‘int parseStructureFaster(molfile_atom_t*, int*, pdbxParser*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:484:47: warning: unused variable ‘j’ [-Wunused-variable] 484 | int i, count, atomdata, pos, idx, xyzcount, j; | ^ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:503:8: warning: unused variable ‘oldChain’ [-Wunused-variable] 503 | char oldChain[8]; | ^~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp: In function ‘bool readAngleBonds(molfile_atom_t*, pdbxParser*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:803:7: warning: unused variable ‘bondTable’ [-Wunused-variable] 803 | int bondTable[32]; | ^~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:807:15: warning: unused variable ‘j’ [-Wunused-variable] 807 | int i, pos, j, k; | ^ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:811:8: warning: unused variable ‘modelNum’ [-Wunused-variable] 811 | char modelNum[8]; | ^~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:822:20: warning: unused variable ‘atom’ [-Wunused-variable] 822 | molfile_atom_t * atom; | ^~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:884:7: warning: unused variable ‘test’ [-Wunused-variable] 884 | int test = parser->nbonds + bnum; | ^~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp: In function ‘bool readRMSDBonds(molfile_atom_t*, pdbxParser*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:984:7: warning: unused variable ‘bondTable’ [-Wunused-variable] 984 | int bondTable[32]; | ^~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:988:15: warning: unused variable ‘j’ [-Wunused-variable] 988 | int i, pos, j, k; | ^ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:991:8: warning: unused variable ‘modelNum’ [-Wunused-variable] 991 | char modelNum[8]; | ^~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:1002:20: warning: unused variable ‘atom’ [-Wunused-variable] 1002 | molfile_atom_t * atom; | ^~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp: In function ‘void* open_file_write(const char*, const char*, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:1409:9: warning: unused variable ‘fd’ [-Wunused-variable] 1409 | FILE* fd; | ^~ [ 18%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp [ 19%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp [ 19%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp [ 20%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c [ 20%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c [ 21%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.cpp [ 21%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c In file included from /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp:30: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/ply_c.h: In function ‘void put_element_ply(PlyFile*, void*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:459:7: warning: unused variable ‘i’ [-Wunused-variable] 459 | int i,j,k; | ^ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/ply_c.h: In function ‘void ascii_get_element(PlyFile*, char*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1407:7: warning: unused variable ‘i’ [-Wunused-variable] 1407 | int i,j,k; | ^ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/ply_c.h: In function ‘void binary_get_element(PlyFile*, char*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1541:7: warning: unused variable ‘i’ [-Wunused-variable] 1541 | int i,j,k; | ^ [ 21%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp [ 22%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp [ 22%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp [ 23%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c [ 23%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/ply_c.h: In function ‘char* recreate_command_line(int, char**)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1334:11: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 1334 | line[0] = '\0'; | ~~~~~~~~^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1333:26: note: destination object of size 0 allocated by ‘malloc’ 1333 | line = (char *) malloc (sizeof(char) * len); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~ [ 24%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c [ 24%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c [ 24%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c [ 25%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c [ 25%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c [ 26%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c [ 26%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c [ 27%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c [ 27%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp [ 27%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp [ 28%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp [ 28%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c [ 29%] Building CXX object CMakeFiles/_cmd.dir/layer0/Bezier.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Bezier.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Bezier.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Bezier.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Bezier.cpp [ 29%] Building CXX object CMakeFiles/_cmd.dir/layer0/Block.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Block.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Block.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Block.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Block.cpp [ 29%] Building CXX object CMakeFiles/_cmd.dir/layer0/CarveHelper.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/CarveHelper.cpp.o -MF CMakeFiles/_cmd.dir/layer0/CarveHelper.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/CarveHelper.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/CarveHelper.cpp /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c: In function ‘vtf_read_bonds’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c:147:48: warning: ‘%s’ directive argument is null [-Wformat-overflow=] 147 | sprintf(message, "vtfplugin:%d: error: %s: \"%s\"\n", | ^~ [ 29%] Building CXX object CMakeFiles/_cmd.dir/layer0/Crystal.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Crystal.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Crystal.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Crystal.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Crystal.cpp [ 30%] Building CXX object CMakeFiles/_cmd.dir/layer0/ContourSurf.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/ContourSurf.cpp.o -MF CMakeFiles/_cmd.dir/layer0/ContourSurf.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/ContourSurf.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/ContourSurf.cpp [ 31%] Building CXX object CMakeFiles/_cmd.dir/layer0/Err.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Err.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Err.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Err.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Err.cpp /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘std::string framefile(const std::string&, size_t, size_t, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:675:35: warning: ‘sprintf’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 675 | sprintf(answer, "%03x/", d1); | ^ In function ‘std::string DDreldir(const std::string&, int, int)’, inlined from ‘std::string framefile(const std::string&, size_t, size_t, int, int)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:779:23: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:675:20: note: ‘sprintf’ output between 5 and 10 bytes into a destination of size 9 675 | sprintf(answer, "%03x/", d1); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘std::string framefile(const std::string&, size_t, size_t, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:673:35: warning: ‘%03x’ directive writing between 3 and 8 bytes into a region of size between 0 and 5 [-Wformat-overflow=] 673 | sprintf(answer, "%03x/%03x/", d1, d2); | ^~~~ In function ‘std::string DDreldir(const std::string&, int, int)’, inlined from ‘std::string framefile(const std::string&, size_t, size_t, int, int)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:779:23: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:673:29: note: directive argument in the range [0, 2147483646] 673 | sprintf(answer, "%03x/%03x/", d1, d2); | ^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:673:20: note: ‘sprintf’ output between 9 and 19 bytes into a destination of size 9 673 | sprintf(answer, "%03x/%03x/", d1, d2); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘void DDmkdir(const std::string&, mode_t, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:714:23: warning: ‘%03x’ directive writing between 3 and 8 bytes into a region of size 6 [-Wformat-overflow=] 714 | sprintf(sub, "%03x/", i); | ^~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:714:22: note: directive argument in the range [0, 2147483646] 714 | sprintf(sub, "%03x/", i); | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:714:16: note: ‘sprintf’ output between 5 and 10 bytes into a destination of size 6 714 | sprintf(sub, "%03x/", i); | ~~~~~~~^~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:722:30: warning: ‘%03x’ directive writing between 3 and 8 bytes into a region of size 6 [-Wformat-overflow=] 722 | sprintf(subsub, "%03x", j); | ^~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:722:29: note: directive argument in the range [0, 2147483646] 722 | sprintf(subsub, "%03x", j); | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:722:20: note: ‘sprintf’ output between 4 and 9 bytes into a destination of size 6 722 | sprintf(subsub, "%03x", j); | ~~~~~~~^~~~~~~~~~~~~~~~~~~ [ 31%] Building CXX object CMakeFiles/_cmd.dir/layer0/Feedback.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Feedback.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Feedback.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Feedback.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.cpp [ 32%] Building CXX object CMakeFiles/_cmd.dir/layer0/Field.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Field.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Field.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Field.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Field.cpp [ 32%] Building CXX object CMakeFiles/_cmd.dir/layer0/File.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/File.cpp.o -MF CMakeFiles/_cmd.dir/layer0/File.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/File.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/File.cpp [ 32%] Building CXX object CMakeFiles/_cmd.dir/layer0/GFXManager.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/GFXManager.cpp.o -MF CMakeFiles/_cmd.dir/layer0/GFXManager.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/GFXManager.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/GFXManager.cpp [ 33%] Building CXX object CMakeFiles/_cmd.dir/layer0/GenericBuffer.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/GenericBuffer.cpp.o -MF CMakeFiles/_cmd.dir/layer0/GenericBuffer.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/GenericBuffer.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/GenericBuffer.cpp [ 33%] Building CXX object CMakeFiles/_cmd.dir/layer0/GraphicsUtil.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/GraphicsUtil.cpp.o -MF CMakeFiles/_cmd.dir/layer0/GraphicsUtil.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/GraphicsUtil.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/GraphicsUtil.cpp [ 34%] Building CXX object CMakeFiles/_cmd.dir/layer0/Isosurf.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Isosurf.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Isosurf.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Isosurf.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Isosurf.cpp [ 34%] Building CXX object CMakeFiles/_cmd.dir/layer0/Map.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Map.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Map.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Map.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Map.cpp [ 35%] Building CXX object CMakeFiles/_cmd.dir/layer0/Match.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Match.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Match.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Match.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Match.cpp [ 35%] Building CXX object CMakeFiles/_cmd.dir/layer0/Matrix.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Matrix.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Matrix.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Matrix.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Matrix.cpp [ 35%] Building CXX object CMakeFiles/_cmd.dir/layer0/MemoryDebug.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/MemoryDebug.cpp.o -MF CMakeFiles/_cmd.dir/layer0/MemoryDebug.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/MemoryDebug.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/MemoryDebug.cpp [ 36%] Building CXX object CMakeFiles/_cmd.dir/layer0/MemoryUsage.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/MemoryUsage.cpp.o -MF CMakeFiles/_cmd.dir/layer0/MemoryUsage.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/MemoryUsage.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/MemoryUsage.cpp [ 36%] Building CXX object CMakeFiles/_cmd.dir/layer0/MyPNG.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/MyPNG.cpp.o -MF CMakeFiles/_cmd.dir/layer0/MyPNG.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/MyPNG.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/MyPNG.cpp In file included from /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:71: In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1497:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 4 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: destination object ‘nx’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1497:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: at offset [8, 12] into destination object ‘nx’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1497:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: at offset [16, 20] into destination object ‘nx’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1497:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: at offset [24, 28] into destination object ‘nx’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1497:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: at offset [32, 36] into destination object ‘nx’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1497:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: at offset [40, 44] into destination object ‘nx’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1497:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: at offset [48, 52] into destination object ‘nx’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1498:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 4 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: destination object ‘ny’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1498:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: at offset [8, 12] into destination object ‘ny’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1498:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: at offset [16, 20] into destination object ‘ny’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1498:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: at offset [24, 28] into destination object ‘ny’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1498:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: at offset [32, 36] into destination object ‘ny’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1498:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: at offset [40, 44] into destination object ‘ny’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1498:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: at offset [48, 52] into destination object ‘ny’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1499:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 4 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: destination object ‘nz’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1499:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: at offset [8, 12] into destination object ‘nz’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1499:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: at offset [16, 20] into destination object ‘nz’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1499:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: at offset [24, 28] into destination object ‘nz’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1499:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: at offset [32, 36] into destination object ‘nz’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1499:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: at offset [40, 44] into destination object ‘nz’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1499:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: at offset [48, 52] into destination object ‘nz’ of size 4 1494 | int32_t nx, ny, nz; | ^~ [ 37%] Building CXX object CMakeFiles/_cmd.dir/layer0/Parse.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Parse.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Parse.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Parse.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Parse.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer0/MemoryUsage.cpp: In function ‘size_t pymol::memory_usage()’: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/MemoryUsage.cpp:38:21: warning: use of assignment suppression and length modifier together in gnu_scanf format [-Wformat=] 38 | std::fscanf(fp, "%*zu%zu", &vmRSS); | ^~~~~~~~~ [ 37%] Building CXX object CMakeFiles/_cmd.dir/layer0/Pixmap.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Pixmap.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Pixmap.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Pixmap.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Pixmap.cpp [ 37%] Building CXX object CMakeFiles/_cmd.dir/layer0/PostProcess.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/PostProcess.cpp.o -MF CMakeFiles/_cmd.dir/layer0/PostProcess.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/PostProcess.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/PostProcess.cpp [ 38%] Building CXX object CMakeFiles/_cmd.dir/layer0/PrintUtils.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/PrintUtils.cpp.o -MF CMakeFiles/_cmd.dir/layer0/PrintUtils.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/PrintUtils.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/PrintUtils.cpp [ 38%] Building CXX object CMakeFiles/_cmd.dir/layer0/ShaderMgr.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/ShaderMgr.cpp.o -MF CMakeFiles/_cmd.dir/layer0/ShaderMgr.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/ShaderMgr.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/ShaderMgr.cpp [ 39%] Building CXX object CMakeFiles/_cmd.dir/layer0/ShaderPreprocessor.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/ShaderPreprocessor.cpp.o -MF CMakeFiles/_cmd.dir/layer0/ShaderPreprocessor.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/ShaderPreprocessor.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/ShaderPreprocessor.cpp In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_wrapped_v1({anonymous}::BlobMap&, uint32_t, bool, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1552:26, inlined from ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1751:29: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 4 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In member function ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1548:21: note: destination object ‘nz’ of size 4 1548 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_wrapped_v1({anonymous}::BlobMap&, uint32_t, bool, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1552:26, inlined from ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1751:29: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In member function ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1548:21: note: at offset [8, 12] into destination object ‘nz’ of size 4 1548 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_wrapped_v1({anonymous}::BlobMap&, uint32_t, bool, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1552:26, inlined from ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1751:29: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In member function ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1548:21: note: at offset [16, 20] into destination object ‘nz’ of size 4 1548 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_wrapped_v1({anonymous}::BlobMap&, uint32_t, bool, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1552:26, inlined from ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1751:29: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In member function ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1548:21: note: at offset [24, 28] into destination object ‘nz’ of size 4 1548 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_wrapped_v1({anonymous}::BlobMap&, uint32_t, bool, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1552:26, inlined from ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1751:29: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In member function ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1548:21: note: at offset [32, 36] into destination object ‘nz’ of size 4 1548 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_wrapped_v1({anonymous}::BlobMap&, uint32_t, bool, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1552:26, inlined from ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1751:29: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In member function ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1548:21: note: at offset [40, 44] into destination object ‘nz’ of size 4 1548 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_wrapped_v1({anonymous}::BlobMap&, uint32_t, bool, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1552:26, inlined from ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1751:29: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In member function ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1548:21: note: at offset [48, 52] into destination object ‘nz’ of size 4 1548 | int32_t nx, ny, nz; | ^~ [ 39%] Building CXX object CMakeFiles/_cmd.dir/layer0/ShaderPrg.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/ShaderPrg.cpp.o -MF CMakeFiles/_cmd.dir/layer0/ShaderPrg.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/ShaderPrg.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/ShaderPrg.cpp [ 40%] Building CXX object CMakeFiles/_cmd.dir/layer0/Sphere.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Sphere.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Sphere.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Sphere.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Sphere.cpp [ 40%] Building CXX object CMakeFiles/_cmd.dir/layer0/TTT.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/TTT.cpp.o -MF CMakeFiles/_cmd.dir/layer0/TTT.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/TTT.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/TTT.cpp [ 40%] Building CXX object CMakeFiles/_cmd.dir/layer0/Tetsurf.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Tetsurf.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Tetsurf.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Tetsurf.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Tetsurf.cpp [ 41%] Building CXX object CMakeFiles/_cmd.dir/layer0/Texture.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Texture.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Texture.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Texture.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Texture.cpp [ 41%] Building CXX object CMakeFiles/_cmd.dir/layer0/Tracker.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Tracker.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Tracker.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Tracker.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Tracker.cpp [ 42%] Building CXX object CMakeFiles/_cmd.dir/layer0/Triangle.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Triangle.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Triangle.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Triangle.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Triangle.cpp [ 42%] Building CXX object CMakeFiles/_cmd.dir/layer0/Util.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Util.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Util.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Util.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Util.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Texture.cpp: In function ‘bool TextureIsCharTextured(PyMOLGlobals*, int, float*)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Texture.cpp:130:9: warning: unused variable ‘use_shader’ [-Wunused-variable] 130 | short use_shader = (short) SettingGetGlobal_b(G, cSetting_use_shaders); | ^~~~~~~~~~ [ 42%] Building CXX object CMakeFiles/_cmd.dir/layer0/Vector.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Vector.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Vector.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Vector.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Vector.cpp [ 43%] Building CXX object CMakeFiles/_cmd.dir/layer0/Util2.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Util2.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Util2.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Util2.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Util2.cpp [ 43%] Building CXX object CMakeFiles/_cmd.dir/layer0/Word.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Word.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Word.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Word.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Word.cpp [ 44%] Building CXX object CMakeFiles/_cmd.dir/layer0/ccealignmodule.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/ccealignmodule.cpp.o -MF CMakeFiles/_cmd.dir/layer0/ccealignmodule.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/ccealignmodule.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/ccealignmodule.cpp [ 44%] Building CXX object CMakeFiles/_cmd.dir/layer0/marching_cubes.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/marching_cubes.cpp.o -MF CMakeFiles/_cmd.dir/layer0/marching_cubes.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/marching_cubes.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/marching_cubes.cpp [ 45%] Building CXX object CMakeFiles/_cmd.dir/layer0/os_gl.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/os_gl.cpp.o -MF CMakeFiles/_cmd.dir/layer0/os_gl.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/os_gl.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/os_gl.cpp [ 45%] Building CXX object CMakeFiles/_cmd.dir/layer1/Basis.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Basis.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Basis.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Basis.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Basis.cpp [ 45%] Building CXX object CMakeFiles/_cmd.dir/layer1/ButMode.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/ButMode.cpp.o -MF CMakeFiles/_cmd.dir/layer1/ButMode.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/ButMode.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/ButMode.cpp [ 46%] Building CXX object CMakeFiles/_cmd.dir/layer1/CGO.cpp.o [ 46%] Building CXX object CMakeFiles/_cmd.dir/layer1/CGOGL.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/CGO.cpp.o -MF CMakeFiles/_cmd.dir/layer1/CGO.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/CGO.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/CGO.cpp /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/CGOGL.cpp.o -MF CMakeFiles/_cmd.dir/layer1/CGOGL.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/CGOGL.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/CGOGL.cpp [ 47%] Building CXX object CMakeFiles/_cmd.dir/layer1/CGORenderer.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/CGORenderer.cpp.o -MF CMakeFiles/_cmd.dir/layer1/CGORenderer.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/CGORenderer.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/CGORenderer.cpp [ 47%] Building CXX object CMakeFiles/_cmd.dir/layer1/COLLADA.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/COLLADA.cpp.o -MF CMakeFiles/_cmd.dir/layer1/COLLADA.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/COLLADA.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/COLLADA.cpp [ 48%] Building CXX object CMakeFiles/_cmd.dir/layer1/Camera.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Camera.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Camera.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Camera.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Camera.cpp [ 48%] Building CXX object CMakeFiles/_cmd.dir/layer1/Character.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Character.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Character.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Character.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Character.cpp [ 48%] Building CXX object CMakeFiles/_cmd.dir/layer1/Color.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Color.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Color.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Color.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Color.cpp [ 49%] Building CXX object CMakeFiles/_cmd.dir/layer1/Control.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Control.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Control.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Control.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Control.cpp [ 49%] Building CXX object CMakeFiles/_cmd.dir/layer1/Extrude.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Extrude.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Extrude.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Extrude.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Extrude.cpp [ 50%] Building CXX object CMakeFiles/_cmd.dir/layer1/Font.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Font.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Font.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Font.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Font.cpp In file included from /build/reproducible-path/pymol-3.1.0+dfsg/include/tnt/tnt.h:45, from /build/reproducible-path/pymol-3.1.0+dfsg/layer0/ccealignmodule.cpp:39: In member function ‘void TNT::Array1D::set_(T*, T*, const T&) [with T = double]’, inlined from ‘TNT::Array1D::Array1D(int, const T&) [with T = double]’ at /build/reproducible-path/pymol-3.1.0+dfsg/include/tnt/tnt_array1d.h:119:6, inlined from ‘PyObject* findBest(pcePoint, pcePoint, pathCache, int, int, int)’ at /build/reproducible-path/pymol-3.1.0+dfsg/layer0/ccealignmodule.cpp:506:28: /build/reproducible-path/pymol-3.1.0+dfsg/include/tnt/tnt_array1d.h:283:20: warning: ‘void* __builtin_memset(void*, int, long unsigned int)’ specified bound between 18446744056529682432 and 18446744073709551608 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=] 283 | *p = a; | ~~~^~~ [ 50%] Building CXX object CMakeFiles/_cmd.dir/layer1/FontGLUT.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/FontGLUT.cpp.o -MF CMakeFiles/_cmd.dir/layer1/FontGLUT.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/FontGLUT.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/FontGLUT.cpp [ 51%] Building CXX object CMakeFiles/_cmd.dir/layer1/FontGLUT8x13.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/FontGLUT8x13.cpp.o -MF CMakeFiles/_cmd.dir/layer1/FontGLUT8x13.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/FontGLUT8x13.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/FontGLUT8x13.cpp [ 51%] Building CXX object CMakeFiles/_cmd.dir/layer1/FontGLUT9x15.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/FontGLUT9x15.cpp.o -MF CMakeFiles/_cmd.dir/layer1/FontGLUT9x15.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/FontGLUT9x15.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/FontGLUT9x15.cpp [ 51%] Building CXX object CMakeFiles/_cmd.dir/layer1/FontGLUTHel10.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/FontGLUTHel10.cpp.o -MF CMakeFiles/_cmd.dir/layer1/FontGLUTHel10.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/FontGLUTHel10.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/FontGLUTHel10.cpp [ 52%] Building CXX object CMakeFiles/_cmd.dir/layer1/FontGLUTHel12.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/FontGLUTHel12.cpp.o -MF CMakeFiles/_cmd.dir/layer1/FontGLUTHel12.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/FontGLUTHel12.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/FontGLUTHel12.cpp [ 52%] Building CXX object CMakeFiles/_cmd.dir/layer1/FontGLUTHel18.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/FontGLUTHel18.cpp.o -MF CMakeFiles/_cmd.dir/layer1/FontGLUTHel18.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/FontGLUTHel18.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/FontGLUTHel18.cpp [ 53%] Building CXX object CMakeFiles/_cmd.dir/layer1/FontType.cpp.o [ 53%] Building CXX object CMakeFiles/_cmd.dir/layer1/ImageUtils.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/FontType.cpp.o -MF CMakeFiles/_cmd.dir/layer1/FontType.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/FontType.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/FontType.cpp /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/ImageUtils.cpp.o -MF CMakeFiles/_cmd.dir/layer1/ImageUtils.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/ImageUtils.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/ImageUtils.cpp [ 54%] Building CXX object CMakeFiles/_cmd.dir/layer1/Movie.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Movie.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Movie.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Movie.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Movie.cpp [ 54%] Building CXX object CMakeFiles/_cmd.dir/layer1/Ortho.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Ortho.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Ortho.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Ortho.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Ortho.cpp [ 54%] Building CXX object CMakeFiles/_cmd.dir/layer1/P.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/P.cpp.o -MF CMakeFiles/_cmd.dir/layer1/P.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/P.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/P.cpp [ 55%] Building CXX object CMakeFiles/_cmd.dir/layer1/PConv.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/PConv.cpp.o -MF CMakeFiles/_cmd.dir/layer1/PConv.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/PConv.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/PConv.cpp [ 55%] Building CXX object CMakeFiles/_cmd.dir/layer1/Picking.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Picking.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Picking.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Picking.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Picking.cpp [ 56%] Building CXX object CMakeFiles/_cmd.dir/layer1/Pop.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Pop.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Pop.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Pop.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Pop.cpp [ 56%] Building CXX object CMakeFiles/_cmd.dir/layer1/PyMOLObject.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/PyMOLObject.cpp.o -MF CMakeFiles/_cmd.dir/layer1/PyMOLObject.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/PyMOLObject.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/PyMOLObject.cpp [ 56%] Building CXX object CMakeFiles/_cmd.dir/layer1/Ray.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Ray.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Ray.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Ray.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Ray.cpp [ 57%] Building CXX object CMakeFiles/_cmd.dir/layer1/Rep.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Rep.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Rep.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Rep.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Rep.cpp [ 57%] Building CXX object CMakeFiles/_cmd.dir/layer1/Scene.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Scene.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Scene.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Scene.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Scene.cpp [ 58%] Building CXX object CMakeFiles/_cmd.dir/layer1/SceneMouse.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/SceneMouse.cpp.o -MF CMakeFiles/_cmd.dir/layer1/SceneMouse.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/SceneMouse.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SceneMouse.cpp [ 58%] Building CXX object CMakeFiles/_cmd.dir/layer1/ScenePicking.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/ScenePicking.cpp.o -MF CMakeFiles/_cmd.dir/layer1/ScenePicking.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/ScenePicking.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/ScenePicking.cpp [ 59%] Building CXX object CMakeFiles/_cmd.dir/layer1/SceneRay.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/SceneRay.cpp.o -MF CMakeFiles/_cmd.dir/layer1/SceneRay.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/SceneRay.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SceneRay.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer1/PyMOLObject.cpp: In function ‘int ObjectMotion(pymol::CObject*, MViewAction, int, int, float, float, int, float, int, int, int, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer1/PyMOLObject.cpp:193:15: warning: ignoring return value of ‘constexpr const _Tp& std::max(const _Tp&, const _Tp&) [with _Tp = int]’, declared with attribute ‘nodiscard’ [-Wunused-result] 193 | std::max(0, first); | ~~~~~~~~^~~~~~~~~~ In file included from /usr/include/c++/15/bits/stl_uninitialized.h:63, from /usr/include/c++/15/memory:71, from /build/reproducible-path/pymol-3.1.0+dfsg/layer0/os_python.h:23, from /build/reproducible-path/pymol-3.1.0+dfsg/layer1/PyMOLObject.cpp:17: /usr/include/c++/15/bits/stl_algobase.h:258:5: note: declared here 258 | max(const _Tp& __a, const _Tp& __b) | ^~~ In file included from /usr/include/c++/15/bits/stl_algobase.h:64, from /usr/include/c++/15/bits/specfun.h:43, from /usr/include/c++/15/cmath:3913, from /usr/include/c++/15/math.h:36, from /build/reproducible-path/pymol-3.1.0+dfsg/layer0/os_std.h:24, from /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Scene.cpp:18: /usr/include/c++/15/bits/stl_pair.h: In instantiation of ‘constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = float&; _T2 = float&; typename __strip_reference_wrapper::type>::__type = float; typename decay<_Tp>::type = float; typename __strip_reference_wrapper::type>::__type = float; typename decay<_Tp2>::type = float]’: /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Scene.cpp:1469:24: required from here 1469 | return std::make_pair(clip.m_front, clip.m_back); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_pair.h:1164:5: note: parameter passing for argument of type ‘std::pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 1164 | make_pair(_T1&& __x, _T2&& __y) | ^~~~~~~~~ [ 59%] Building CXX object CMakeFiles/_cmd.dir/layer1/SceneRender.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/SceneRender.cpp.o -MF CMakeFiles/_cmd.dir/layer1/SceneRender.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/SceneRender.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SceneRender.cpp [ 59%] Building CXX object CMakeFiles/_cmd.dir/layer1/SceneView.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/SceneView.cpp.o -MF CMakeFiles/_cmd.dir/layer1/SceneView.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/SceneView.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SceneView.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SceneMouse.cpp: In function ‘void SceneClickTransformObject(PyMOLGlobals*, pymol::CObject*, const NamedPicking&, int, bool)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SceneMouse.cpp:455:32: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 237 [-Wformat-truncation=] 455 | " You clicked %s -> (%s)\n", buffer.c_str(), name ENDFB(G); | ^~ ~~~~ In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SceneMouse.cpp:19: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output 21 or more bytes (assuming 276) into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SceneMouse.cpp:454:11: note: in expansion of macro ‘PRINTFB’ 454 | PRINTFB(G, FB_Scene, FB_Results) | ^~~~~~~ [ 60%] Building CXX object CMakeFiles/_cmd.dir/layer1/ScrollBar.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/ScrollBar.cpp.o -MF CMakeFiles/_cmd.dir/layer1/ScrollBar.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/ScrollBar.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/ScrollBar.cpp [ 60%] Building CXX object CMakeFiles/_cmd.dir/layer1/Seq.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Seq.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Seq.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Seq.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Seq.cpp [ 61%] Building CXX object CMakeFiles/_cmd.dir/layer1/Setting.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Setting.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Setting.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Setting.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Setting.cpp [ 61%] Building CXX object CMakeFiles/_cmd.dir/layer1/Shaker.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Shaker.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Shaker.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Shaker.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Shaker.cpp [ 62%] Building CXX object CMakeFiles/_cmd.dir/layer1/SymOp.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/SymOp.cpp.o -MF CMakeFiles/_cmd.dir/layer1/SymOp.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/SymOp.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SymOp.cpp [ 62%] Building CXX object CMakeFiles/_cmd.dir/layer1/SymOpPConv.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/SymOpPConv.cpp.o -MF CMakeFiles/_cmd.dir/layer1/SymOpPConv.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/SymOpPConv.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SymOpPConv.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SymOp.cpp: In member function ‘std::string pymol::SymOp::to_string() const’: /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SymOp.cpp:37:32: warning: ‘%d’ directive output may be truncated writing between 1 and 4 bytes into a region of size between 0 and 5 [-Wformat-truncation=] 37 | std::snprintf(code, 8, "%u_%d%d%d", index + 1, x + 5, y + 5, z + 5); | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SymOp.cpp:37:26: note: directive argument in the range [-123, 132] 37 | std::snprintf(code, 8, "%u_%d%d%d", index + 1, x + 5, y + 5, z + 5); | ^~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SymOp.cpp:37:26: note: directive argument in the range [-123, 132] /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SymOp.cpp:37:16: note: ‘snprintf’ output between 6 and 17 bytes into a destination of size 8 37 | std::snprintf(code, 8, "%u_%d%d%d", index + 1, x + 5, y + 5, z + 5); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 62%] Building CXX object CMakeFiles/_cmd.dir/layer1/SymOpTools.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/SymOpTools.cpp.o -MF CMakeFiles/_cmd.dir/layer1/SymOpTools.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/SymOpTools.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SymOpTools.cpp [ 63%] Building CXX object CMakeFiles/_cmd.dir/layer1/Symmetry.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Symmetry.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Symmetry.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Symmetry.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Symmetry.cpp [ 63%] Building CXX object CMakeFiles/_cmd.dir/layer1/Text.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Text.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Text.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Text.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Text.cpp [ 64%] Building CXX object CMakeFiles/_cmd.dir/layer1/TypeFace.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/TypeFace.cpp.o -MF CMakeFiles/_cmd.dir/layer1/TypeFace.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/TypeFace.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/TypeFace.cpp [ 64%] Building CXX object CMakeFiles/_cmd.dir/layer1/View.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/View.cpp.o -MF CMakeFiles/_cmd.dir/layer1/View.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/View.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/View.cpp [ 64%] Building CXX object CMakeFiles/_cmd.dir/layer1/Wizard.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Wizard.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Wizard.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Wizard.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Wizard.cpp [ 65%] Building CXX object CMakeFiles/_cmd.dir/layer2/AssemblyHelpers.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/AssemblyHelpers.cpp.o -MF CMakeFiles/_cmd.dir/layer2/AssemblyHelpers.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/AssemblyHelpers.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/AssemblyHelpers.cpp [ 65%] Building CXX object CMakeFiles/_cmd.dir/layer2/AtomInfo.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/AtomInfo.cpp.o -MF CMakeFiles/_cmd.dir/layer2/AtomInfo.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/AtomInfo.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/AtomInfo.cpp [ 66%] Building CXX object CMakeFiles/_cmd.dir/layer2/AtomInfoHistory.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/AtomInfoHistory.cpp.o -MF CMakeFiles/_cmd.dir/layer2/AtomInfoHistory.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/AtomInfoHistory.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/AtomInfoHistory.cpp [ 66%] Building CXX object CMakeFiles/_cmd.dir/layer2/BondTypeHistory.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/BondTypeHistory.cpp.o -MF CMakeFiles/_cmd.dir/layer2/BondTypeHistory.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/BondTypeHistory.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/BondTypeHistory.cpp [ 67%] Building CXX object CMakeFiles/_cmd.dir/layer2/CifFile.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/CifFile.cpp.o -MF CMakeFiles/_cmd.dir/layer2/CifFile.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/CifFile.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/CifFile.cpp [ 67%] Building CXX object CMakeFiles/_cmd.dir/layer2/CifMoleculeReader.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/CifMoleculeReader.cpp.o -MF CMakeFiles/_cmd.dir/layer2/CifMoleculeReader.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/CifMoleculeReader.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/CifMoleculeReader.cpp [ 67%] Building CXX object CMakeFiles/_cmd.dir/layer2/CoordSet.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/CoordSet.cpp.o -MF CMakeFiles/_cmd.dir/layer2/CoordSet.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/CoordSet.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/CoordSet.cpp [ 68%] Building CXX object CMakeFiles/_cmd.dir/layer2/DistSet.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/DistSet.cpp.o -MF CMakeFiles/_cmd.dir/layer2/DistSet.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/DistSet.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/DistSet.cpp [ 68%] Building CXX object CMakeFiles/_cmd.dir/layer2/GadgetSet.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/GadgetSet.cpp.o -MF CMakeFiles/_cmd.dir/layer2/GadgetSet.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/GadgetSet.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/GadgetSet.cpp [ 69%] Building CXX object CMakeFiles/_cmd.dir/layer2/HydrogenAdder.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/HydrogenAdder.cpp.o -MF CMakeFiles/_cmd.dir/layer2/HydrogenAdder.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/HydrogenAdder.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/HydrogenAdder.cpp [ 69%] Building CXX object CMakeFiles/_cmd.dir/layer2/MmodTyping.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/MmodTyping.cpp.o -MF CMakeFiles/_cmd.dir/layer2/MmodTyping.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/MmodTyping.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/MmodTyping.cpp [ 70%] Building CXX object CMakeFiles/_cmd.dir/layer2/MmtfMoleculeReader.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/MmtfMoleculeReader.cpp.o -MF CMakeFiles/_cmd.dir/layer2/MmtfMoleculeReader.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/MmtfMoleculeReader.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/MmtfMoleculeReader.cpp [ 70%] Building CXX object CMakeFiles/_cmd.dir/layer2/Mol2Typing.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/Mol2Typing.cpp.o -MF CMakeFiles/_cmd.dir/layer2/Mol2Typing.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/Mol2Typing.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/Mol2Typing.cpp [ 70%] Building CXX object CMakeFiles/_cmd.dir/layer2/MolV3000.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/MolV3000.cpp.o -MF CMakeFiles/_cmd.dir/layer2/MolV3000.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/MolV3000.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/MolV3000.cpp [ 71%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectAlignment.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/ObjectAlignment.cpp.o -MF CMakeFiles/_cmd.dir/layer2/ObjectAlignment.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/ObjectAlignment.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectAlignment.cpp [ 71%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectCGO.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/ObjectCGO.cpp.o -MF CMakeFiles/_cmd.dir/layer2/ObjectCGO.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/ObjectCGO.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectCGO.cpp [ 72%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectCallback.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/ObjectCallback.cpp.o -MF CMakeFiles/_cmd.dir/layer2/ObjectCallback.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/ObjectCallback.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectCallback.cpp [ 72%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectCurve.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/ObjectCurve.cpp.o -MF CMakeFiles/_cmd.dir/layer2/ObjectCurve.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/ObjectCurve.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectCurve.cpp [ 72%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectDist.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/ObjectDist.cpp.o -MF CMakeFiles/_cmd.dir/layer2/ObjectDist.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/ObjectDist.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectDist.cpp [ 73%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectGadget.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/ObjectGadget.cpp.o -MF CMakeFiles/_cmd.dir/layer2/ObjectGadget.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/ObjectGadget.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectGadget.cpp [ 73%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectGadgetRamp.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/ObjectGadgetRamp.cpp.o -MF CMakeFiles/_cmd.dir/layer2/ObjectGadgetRamp.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/ObjectGadgetRamp.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectGadgetRamp.cpp [ 74%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectGroup.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/ObjectGroup.cpp.o -MF CMakeFiles/_cmd.dir/layer2/ObjectGroup.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/ObjectGroup.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectGroup.cpp [ 74%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectMap.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/ObjectMap.cpp.o -MF CMakeFiles/_cmd.dir/layer2/ObjectMap.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/ObjectMap.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp [ 75%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectMesh.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/ObjectMesh.cpp.o -MF CMakeFiles/_cmd.dir/layer2/ObjectMesh.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/ObjectMesh.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMesh.cpp [ 75%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectMolecule.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/ObjectMolecule.cpp.o -MF CMakeFiles/_cmd.dir/layer2/ObjectMolecule.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/ObjectMolecule.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp [ 75%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectMolecule2.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/ObjectMolecule2.cpp.o -MF CMakeFiles/_cmd.dir/layer2/ObjectMolecule2.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/ObjectMolecule2.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule2.cpp [ 76%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectMolecule3.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/ObjectMolecule3.cpp.o -MF CMakeFiles/_cmd.dir/layer2/ObjectMolecule3.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/ObjectMolecule3.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule3.cpp [ 76%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectSlice.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/ObjectSlice.cpp.o -MF CMakeFiles/_cmd.dir/layer2/ObjectSlice.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/ObjectSlice.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSlice.cpp [ 77%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectSurface.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/ObjectSurface.cpp.o -MF CMakeFiles/_cmd.dir/layer2/ObjectSurface.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/ObjectSurface.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSurface.cpp [ 77%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectVolume.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/ObjectVolume.cpp.o -MF CMakeFiles/_cmd.dir/layer2/ObjectVolume.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/ObjectVolume.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectVolume.cpp [ 78%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepAngle.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepAngle.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepAngle.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepAngle.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepAngle.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMesh.cpp: In member function ‘virtual void ObjectMesh::update()’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMesh.cpp:508:39: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 226 [-Wformat-truncation=] 508 | "ObjectMeshUpdate-Error: map '%s' has been deleted.\n", | ^~ In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMesh.cpp:28: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 50 and 305 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMesh.cpp:507:9: note: in expansion of macro ‘PRINTFB’ 507 | PRINTFB(I->G, FB_ObjectMesh, FB_Errors) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMesh.cpp:541:38: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 232 [-Wformat-truncation=] 541 | " ObjectMesh: updating \"%s\".\n", I->Name ENDFB(G); | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 27 and 282 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMesh.cpp:540:13: note: in expansion of macro ‘PRINTFB’ 540 | PRINTFB(G, FB_ObjectMesh, FB_Details) | ^~~~~~~ [ 78%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepCartoon.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepCartoon.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepCartoon.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepCartoon.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepCartoon.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp: In function ‘CoordSet* ObjectMoleculeMOLStr2CoordSet.constprop(PyMOLGlobals*, const char*, AtomInfoType**, const char**)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp:7597:37: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 224 [-Wformat-truncation=] 7597 | " ObjMolMOLStr2CoordSet: title '%s'\n", nameTmp ENDFB(G) | ^~ ~~~~~~~ In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp:49: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 34 and 289 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp:7596:3: note: in expansion of macro ‘PRINTFB’ 7596 | PRINTFB(G, FB_ObjectMolecule, FB_Blather) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMesh.cpp: In function ‘void ObjectMeshDump(ObjectMesh*, const char*, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMesh.cpp:333:25: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 238 [-Wformat-truncation=] 333 | " ObjectMeshDump: %s written to %s\n", I->Name, fname ENDFB(I->G); | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output 31 or more bytes (assuming 286) into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMesh.cpp:332:7: note: in expansion of macro ‘PRINTFB’ 332 | PRINTFB(I->G, FB_ObjectMesh, FB_Actions) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSlice.cpp: In member function ‘virtual void ObjectSlice::update()’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSlice.cpp:639:42: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 225 [-Wformat-truncation=] 639 | "ObjectSliceUpdate-Error: map '%s' has been deleted.\n", oss->MapName | ^~ In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSlice.cpp:44: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 51 and 306 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSlice.cpp:638:9: note: in expansion of macro ‘PRINTFB’ 638 | PRINTFB(I->G, FB_ObjectSlice, FB_Errors) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSlice.cpp:650:39: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 231 [-Wformat-truncation=] 650 | " ObjectSlice: updating \"%s\".\n", I->Name ENDFB(I->G); | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 28 and 283 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSlice.cpp:649:11: note: in expansion of macro ‘PRINTFB’ 649 | PRINTFB(I->G, FB_ObjectSlice, FB_Blather) | ^~~~~~~ [ 78%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepCylBond.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepCylBond.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepCylBond.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepCylBond.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepCylBond.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSurface.cpp: In function ‘void ObjectSurfaceDump(ObjectSurface*, const char*, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSurface.cpp:269:30: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 235 [-Wformat-truncation=] 269 | " ObjectSurfaceDump: %s written to %s\n", I->Name, fname ENDFB(I->G); | ^~ In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSurface.cpp:45: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output 34 or more bytes (assuming 289) into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSurface.cpp:268:7: note: in expansion of macro ‘PRINTFB’ 268 | PRINTFB(I->G, FB_ObjectSurface, FB_Actions) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectVolume.cpp: In function ‘ObjectMapState* ObjectVolumeStateGetMapState(ObjectVolumeState*)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectVolume.cpp:80:33: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 230 [-Wformat-truncation=] 80 | "ObjectVolume-Error: map '%s' has been deleted.\n", vs->MapName | ^~ In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectVolume.cpp:47: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 46 and 301 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectVolume.cpp:79:5: note: in expansion of macro ‘PRINTFB’ 79 | PRINTFB(G, FB_ObjectVolume, FB_Errors) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp: In function ‘void ObjectMapDump(const ObjectMap*, const char*, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:5984:24: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 239 [-Wformat-truncation=] 5984 | " ObjectMapDump: %s written to %s\n", om->Name, fname ENDFB(om->G); | ^~ In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:48: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output 30 or more bytes (assuming 285) into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:5983:5: note: in expansion of macro ‘PRINTFB’ 5983 | PRINTFB(om->G, FB_ObjectMap, FB_Actions) | ^~~~~~~ [ 79%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepDihedral.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepDihedral.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepDihedral.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepDihedral.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepDihedral.cpp [ 79%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepDistDash.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepDistDash.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepDistDash.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepDistDash.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepDistDash.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSurface.cpp: In member function ‘virtual void ObjectSurface::update()’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSurface.cpp:494:43: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 229 [-Wformat-truncation=] 494 | " ObjectSurface: updating \"%s\".\n", I->Name ENDFB(I->G); | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 30 and 285 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSurface.cpp:493:13: note: in expansion of macro ‘PRINTFB’ 493 | PRINTFB(I->G, FB_ObjectSurface, FB_Details) | ^~~~~~~ [ 80%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepDistLabel.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepDistLabel.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepDistLabel.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepDistLabel.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepDistLabel.cpp [ 80%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepDot.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepDot.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepDot.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepDot.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepDot.cpp [ 81%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepEllipsoid.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepEllipsoid.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepEllipsoid.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepEllipsoid.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepEllipsoid.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp: In member function ‘virtual void ObjectMolecule::update()’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp:10623:82: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size between 181 and 191 [-Wformat-truncation=] 10623 | " ObjectMolecule-DEBUG: updating representations for state %d of \"%s\".\n", | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 68 and 333 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp:10622:13: note: in expansion of macro ‘PRINTFB’ 10622 | PRINTFB(G, FB_ObjectMolecule, FB_Blather) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp: In function ‘int ObjectMoleculeMoveAtom(ObjectMolecule*, int, int, const float*, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp:10749:43: warning: ‘%s’ directive writing up to 1023 bytes into a region of size 1004 [-Wformat-overflow=] 10749 | sprintf(line, "cmd.translate_atom(\"%s\",%15.9f,%15.9f,%15.9f,%d,%d,%d)\n", | ^~ 10750 | buffer, v[0], v[1], v[2], state + 1, mode, 0); | ~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp:10749:21: note: directive argument in the range [-2147483647, 2147483647] 10749 | sprintf(line, "cmd.translate_atom(\"%s\",%15.9f,%15.9f,%15.9f,%d,%d,%d)\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp:10749:14: note: ‘sprintf’ output between 78 and 2036 bytes into a destination of size 1024 10749 | sprintf(line, "cmd.translate_atom(\"%s\",%15.9f,%15.9f,%15.9f,%d,%d,%d)\n", | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 10750 | buffer, v[0], v[1], v[2], state + 1, mode, 0); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 81%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepLabel.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepLabel.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepLabel.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepLabel.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepLabel.cpp [ 81%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepMesh.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepMesh.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepMesh.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepMesh.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepMesh.cpp [ 82%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepNonbonded.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepNonbonded.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepNonbonded.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepNonbonded.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepNonbonded.cpp [ 82%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepNonbondedSphere.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepNonbondedSphere.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepNonbondedSphere.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepNonbondedSphere.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepNonbondedSphere.cpp [ 83%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepRibbon.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepRibbon.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepRibbon.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepRibbon.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepRibbon.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp: In function ‘int ObjectMapGRDStrToMap(ObjectMap*, char*, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4291:18: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 243 [-Wformat-truncation=] 4291 | " ObjectMap: %s\n", cc ENDFB(I->G); | ^~ ~~ [ 83%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepSphere.cpp.o /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 14 and 1037 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4290:3: note: in expansion of macro ‘PRINTFB’ 4290 | PRINTFB(I->G, FB_ObjectMap, FB_Details) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4291:18: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 243 [-Wformat-truncation=] 4291 | " ObjectMap: %s\n", cc ENDFB(I->G); | ^~ ~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 14 and 1037 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4290:3: note: in expansion of macro ‘PRINTFB’ 4290 | PRINTFB(I->G, FB_ObjectMap, FB_Details) | ^~~~~~~ /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepSphere.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepSphere.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepSphere.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepSphere.cpp [ 83%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepSphereGenerate.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepSphereGenerate.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepSphereGenerate.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepSphereGenerate.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepSphereGenerate.cpp [ 84%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepSphereImmediate.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepSphereImmediate.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepSphereImmediate.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepSphereImmediate.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepSphereImmediate.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule2.cpp: In function ‘int ObjectMoleculeAddPseudoatom(ObjectMolecule*, int, const char*, const char*, const char*, const char*, const char*, const char*, float, int, float, float, const char*, const float*, int, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule2.cpp:335:27: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 238 [-Wformat-truncation=] 335 | " ObjMol: created %s/%s/%s/%s`%d%c/%s\n", | ^~ In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule2.cpp:36: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 26 and 291 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule2.cpp:334:7: note: in expansion of macro ‘PRINTFB’ 334 | PRINTFB(G, FB_ObjectMolecule, FB_Actions) | ^~~~~~~ [ 84%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepSurface.cpp.o [ 85%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepWireBond.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepSurface.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepSurface.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepSurface.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepSurface.cpp /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepWireBond.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepWireBond.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepWireBond.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepWireBond.cpp [ 85%] Building CXX object CMakeFiles/_cmd.dir/layer2/Sculpt.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/Sculpt.cpp.o -MF CMakeFiles/_cmd.dir/layer2/Sculpt.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/Sculpt.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/Sculpt.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp: In function ‘ObjectMap* ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, const char*, int, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:2962:22: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 241 [-Wformat-truncation=] 2962 | " PHIStrToMap: %s\n", cc ENDFB(I->G); | ^~ ~~ In function ‘int ObjectMapPHIStrToMap(ObjectMap*, char*, int, int, int)’, inlined from ‘ObjectMap* ObjectMapReadPHIStr(PyMOLGlobals*, ObjectMap*, char*, int, int, int)’ at /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4804:25, inlined from ‘ObjectMap* ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, const char*, int, int, int, int)’ at /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4836:28: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 16 and 1039 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:2961:5: note: in expansion of macro ‘PRINTFB’ 2961 | PRINTFB(I->G, FB_ObjectMap, FB_Details) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp: In function ‘ObjectMap* ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, const char*, int, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:2971:22: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 241 [-Wformat-truncation=] 2971 | " PHIStrToMap: %s\n", cc ENDFB(I->G); | ^~ ~~ In function ‘int ObjectMapPHIStrToMap(ObjectMap*, char*, int, int, int)’, inlined from ‘ObjectMap* ObjectMapReadPHIStr(PyMOLGlobals*, ObjectMap*, char*, int, int, int)’ at /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4804:25, inlined from ‘ObjectMap* ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, const char*, int, int, int, int)’ at /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4836:28: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 16 and 1039 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:2970:5: note: in expansion of macro ‘PRINTFB’ 2970 | PRINTFB(I->G, FB_ObjectMap, FB_Details) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp: In function ‘ObjectMap* ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, const char*, int, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:2977:22: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 241 [-Wformat-truncation=] 2977 | " PHIStrToMap: %s\n", cc ENDFB(I->G); | ^~ ~~ In function ‘int ObjectMapPHIStrToMap(ObjectMap*, char*, int, int, int)’, inlined from ‘ObjectMap* ObjectMapReadPHIStr(PyMOLGlobals*, ObjectMap*, char*, int, int, int)’ at /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4804:25, inlined from ‘ObjectMap* ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, const char*, int, int, int, int)’ at /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4836:28: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 16 and 1039 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:2976:5: note: in expansion of macro ‘PRINTFB’ 2976 | PRINTFB(I->G, FB_ObjectMap, FB_Details) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp: In function ‘ObjectMap* ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, const char*, int, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:3059:22: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 241 [-Wformat-truncation=] 3059 | " PHIStrToMap: %s\n", cc ENDFB(I->G); | ^~ ~~ In function ‘int ObjectMapPHIStrToMap(ObjectMap*, char*, int, int, int)’, inlined from ‘ObjectMap* ObjectMapReadPHIStr(PyMOLGlobals*, ObjectMap*, char*, int, int, int)’ at /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4804:25, inlined from ‘ObjectMap* ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, const char*, int, int, int, int)’ at /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4836:28: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 16 and 1039 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:3058:5: note: in expansion of macro ‘PRINTFB’ 3058 | PRINTFB(I->G, FB_ObjectMap, FB_Details) | ^~~~~~~ [ 86%] Building CXX object CMakeFiles/_cmd.dir/layer2/SculptCache.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/SculptCache.cpp.o -MF CMakeFiles/_cmd.dir/layer2/SculptCache.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/SculptCache.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/SculptCache.cpp [ 86%] Building CXX object CMakeFiles/_cmd.dir/layer2/SideChainHelper.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/SideChainHelper.cpp.o -MF CMakeFiles/_cmd.dir/layer2/SideChainHelper.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/SideChainHelper.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/SideChainHelper.cpp [ 86%] Building CXX object CMakeFiles/_cmd.dir/layer2/VFont.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/VFont.cpp.o -MF CMakeFiles/_cmd.dir/layer2/VFont.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/VFont.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/VFont.cpp [ 87%] Building CXX object CMakeFiles/_cmd.dir/layer3/AtomIterators.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/AtomIterators.cpp.o -MF CMakeFiles/_cmd.dir/layer3/AtomIterators.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/AtomIterators.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/AtomIterators.cpp [ 87%] Building CXX object CMakeFiles/_cmd.dir/layer3/CifDataValueFormatter.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/CifDataValueFormatter.cpp.o -MF CMakeFiles/_cmd.dir/layer3/CifDataValueFormatter.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/CifDataValueFormatter.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/CifDataValueFormatter.cpp [ 88%] Building CXX object CMakeFiles/_cmd.dir/layer3/Editor.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/Editor.cpp.o -MF CMakeFiles/_cmd.dir/layer3/Editor.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/Editor.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp [ 88%] Building CXX object CMakeFiles/_cmd.dir/layer3/Executive.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/Executive.cpp.o -MF CMakeFiles/_cmd.dir/layer3/Executive.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/Executive.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp [ 89%] Building CXX object CMakeFiles/_cmd.dir/layer3/ExecutivePython.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/ExecutivePython.cpp.o -MF CMakeFiles/_cmd.dir/layer3/ExecutivePython.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/ExecutivePython.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/ExecutivePython.cpp [ 89%] Building CXX object CMakeFiles/_cmd.dir/layer3/Interactions.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/Interactions.cpp.o -MF CMakeFiles/_cmd.dir/layer3/Interactions.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/Interactions.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Interactions.cpp [ 89%] Building CXX object CMakeFiles/_cmd.dir/layer3/MaeExportHelpers.cpp.o [ 90%] Building CXX object CMakeFiles/_cmd.dir/layer3/MoleculeExporter.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/MaeExportHelpers.cpp.o -MF CMakeFiles/_cmd.dir/layer3/MaeExportHelpers.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/MaeExportHelpers.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/MaeExportHelpers.cpp [ 90%] Building CXX object CMakeFiles/_cmd.dir/layer3/MovieScene.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/MoleculeExporter.cpp.o -MF CMakeFiles/_cmd.dir/layer3/MoleculeExporter.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/MoleculeExporter.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/MoleculeExporter.cpp /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/MovieScene.cpp.o -MF CMakeFiles/_cmd.dir/layer3/MovieScene.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/MovieScene.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/MovieScene.cpp [ 91%] Building CXX object CMakeFiles/_cmd.dir/layer3/PlugIOManager.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/PlugIOManager.cpp.o -MF CMakeFiles/_cmd.dir/layer3/PlugIOManager.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/PlugIOManager.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/PlugIOManager.cpp [ 91%] Building CXX object CMakeFiles/_cmd.dir/layer3/RingFinder.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/RingFinder.cpp.o -MF CMakeFiles/_cmd.dir/layer3/RingFinder.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/RingFinder.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/RingFinder.cpp [ 91%] Building CXX object CMakeFiles/_cmd.dir/layer3/Seeker.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/Seeker.cpp.o -MF CMakeFiles/_cmd.dir/layer3/Seeker.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/Seeker.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Seeker.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp: In function ‘void EditorPrepareDrag(PyMOLGlobals*, pymol::CObject*, int, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp:1935:29: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 236 [-Wformat-truncation=] 1935 | " Editor: grabbing (%s).", name ENDFB(G); | ^~ ~~~~ In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp:42: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 22 and 277 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp:1934:7: note: in expansion of macro ‘PRINTFB’ 1934 | PRINTFB(G, FB_Editor, FB_Blather) | ^~~~~~~ In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Setting.h:27, from /build/reproducible-path/pymol-3.1.0+dfsg/layer1/PyMOLObject.h:25, from /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.h:27, from /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:38: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Result.h: In constructor ‘pymol::Result::Result(type) [with ResultT = std::pair]’: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Result.h:99:3: note: parameter passing for argument of type ‘std::pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 99 | Result(type r) : m_result(std::move(r)) {} | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/PlugIOManager.cpp: In function ‘pymol::CObject* PlugIOManagerLoad(PyMOLGlobals*, pymol::CObject**, const char*, int, int, const char*, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/PlugIOManager.cpp:941:65: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 200 [-Wformat-truncation=] 941 | " PlugIOManagerLoad: can't load trajectory into object '%s'\n", obj->Name ENDFB(G); | ^~ In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer3/PlugIOManager.cpp:28: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 58 and 313 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/PlugIOManager.cpp:940:7: note: in expansion of macro ‘PRINTFB’ 940 | PRINTFB(G, FB_ObjectMolecule, FB_Errors) | ^~~~~~~ [ 92%] Building CXX object CMakeFiles/_cmd.dir/layer3/Selector.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/Selector.cpp.o -MF CMakeFiles/_cmd.dir/layer3/Selector.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/Selector.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Selector.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp: In function ‘void EditorDefineExtraPks(PyMOLGlobals*)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp:337:29: warning: ‘%s’ directive writing up to 255 bytes into a region of size 249 [-Wformat-overflow=] 337 | sprintf(buffer, "(byres %s)", name); | ^~ ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp:337:12: note: ‘sprintf’ output between 9 and 264 bytes into a destination of size 256 337 | sprintf(buffer, "(byres %s)", name); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp:339:31: warning: ‘%s’ directive writing up to 255 bytes into a region of size 247 [-Wformat-overflow=] 339 | sprintf(buffer, "(bychain %s)", name); | ^~ ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp:339:12: note: ‘sprintf’ output between 11 and 266 bytes into a destination of size 256 339 | sprintf(buffer, "(bychain %s)", name); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp:341:32: warning: ‘%s’ directive writing up to 255 bytes into a region of size 246 [-Wformat-overflow=] 341 | sprintf(buffer, "(byobject %s)", name); | ^~ ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp:341:12: note: ‘sprintf’ output between 12 and 267 bytes into a destination of size 256 341 | sprintf(buffer, "(byobject %s)", name); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 92%] Building CXX object CMakeFiles/_cmd.dir/layer3/SelectorTmp.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/SelectorTmp.cpp.o -MF CMakeFiles/_cmd.dir/layer3/SelectorTmp.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/SelectorTmp.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/SelectorTmp.cpp [ 93%] Building CXX object CMakeFiles/_cmd.dir/layer3/SpecRec.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/SpecRec.cpp.o -MF CMakeFiles/_cmd.dir/layer3/SpecRec.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/SpecRec.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/SpecRec.cpp [ 93%] Building CXX object CMakeFiles/_cmd.dir/layer3/SpecRecSpecial.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/SpecRecSpecial.cpp.o -MF CMakeFiles/_cmd.dir/layer3/SpecRecSpecial.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/SpecRecSpecial.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/SpecRecSpecial.cpp [ 94%] Building CXX object CMakeFiles/_cmd.dir/layer4/Cmd.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer4/Cmd.cpp.o -MF CMakeFiles/_cmd.dir/layer4/Cmd.cpp.o.d -o CMakeFiles/_cmd.dir/layer4/Cmd.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer4/Cmd.cpp [ 94%] Building CXX object CMakeFiles/_cmd.dir/layer4/Menu.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer4/Menu.cpp.o -MF CMakeFiles/_cmd.dir/layer4/Menu.cpp.o.d -o CMakeFiles/_cmd.dir/layer4/Menu.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer4/Menu.cpp [ 94%] Building CXX object CMakeFiles/_cmd.dir/layer4/PopUp.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer4/PopUp.cpp.o -MF CMakeFiles/_cmd.dir/layer4/PopUp.cpp.o.d -o CMakeFiles/_cmd.dir/layer4/PopUp.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer4/PopUp.cpp [ 95%] Building CXX object CMakeFiles/_cmd.dir/layer5/PyMOL.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer5/PyMOL.cpp.o -MF CMakeFiles/_cmd.dir/layer5/PyMOL.cpp.o.d -o CMakeFiles/_cmd.dir/layer5/PyMOL.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer5/PyMOL.cpp [ 95%] Building CXX object CMakeFiles/_cmd.dir/layer5/TestPyMOL.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer5/TestPyMOL.cpp.o -MF CMakeFiles/_cmd.dir/layer5/TestPyMOL.cpp.o.d -o CMakeFiles/_cmd.dir/layer5/TestPyMOL.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer5/TestPyMOL.cpp [ 96%] Building CXX object CMakeFiles/_cmd.dir/layer5/main.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer5/main.cpp.o -MF CMakeFiles/_cmd.dir/layer5/main.cpp.o.d -o CMakeFiles/_cmd.dir/layer5/main.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer5/main.cpp [ 96%] Building CXX object CMakeFiles/_cmd.dir/ov/src/OVContext.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/ov/src/OVContext.cpp.o -MF CMakeFiles/_cmd.dir/ov/src/OVContext.cpp.o.d -o CMakeFiles/_cmd.dir/ov/src/OVContext.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/ov/src/OVContext.cpp [ 97%] Building CXX object CMakeFiles/_cmd.dir/ov/src/OVHeap.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/ov/src/OVHeap.cpp.o -MF CMakeFiles/_cmd.dir/ov/src/OVHeap.cpp.o.d -o CMakeFiles/_cmd.dir/ov/src/OVHeap.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/ov/src/OVHeap.cpp [ 97%] Building CXX object CMakeFiles/_cmd.dir/ov/src/OVHeapArray.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/ov/src/OVHeapArray.cpp.o -MF CMakeFiles/_cmd.dir/ov/src/OVHeapArray.cpp.o.d -o CMakeFiles/_cmd.dir/ov/src/OVHeapArray.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/ov/src/OVHeapArray.cpp [ 97%] Building CXX object CMakeFiles/_cmd.dir/ov/src/OVLexicon.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/ov/src/OVLexicon.cpp.o -MF CMakeFiles/_cmd.dir/ov/src/OVLexicon.cpp.o.d -o CMakeFiles/_cmd.dir/ov/src/OVLexicon.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/ov/src/OVLexicon.cpp [ 98%] Building CXX object CMakeFiles/_cmd.dir/ov/src/OVOneToAny.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/ov/src/OVOneToAny.cpp.o -MF CMakeFiles/_cmd.dir/ov/src/OVOneToAny.cpp.o.d -o CMakeFiles/_cmd.dir/ov/src/OVOneToAny.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/ov/src/OVOneToAny.cpp [ 98%] Building CXX object CMakeFiles/_cmd.dir/ov/src/OVOneToOne.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/ov/src/OVOneToOne.cpp.o -MF CMakeFiles/_cmd.dir/ov/src/OVOneToOne.cpp.o.d -o CMakeFiles/_cmd.dir/ov/src/OVOneToOne.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/ov/src/OVOneToOne.cpp [ 99%] Building CXX object CMakeFiles/_cmd.dir/ov/src/OVRandom.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/ov/src/OVRandom.cpp.o -MF CMakeFiles/_cmd.dir/ov/src/OVRandom.cpp.o.d -o CMakeFiles/_cmd.dir/ov/src/OVRandom.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/ov/src/OVRandom.cpp [ 99%] Building CXX object CMakeFiles/_cmd.dir/ov/src/ov_utility.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/ov/src/ov_utility.cpp.o -MF CMakeFiles/_cmd.dir/ov/src/ov_utility.cpp.o.d -o CMakeFiles/_cmd.dir/ov/src/ov_utility.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/ov/src/ov_utility.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘pymol::Result<> ExecutiveRemoveAtoms(PyMOLGlobals*, const char*, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:9120:58: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size between 207 and 217 [-Wformat-truncation=] 9120 | " Remove: eliminated %d atoms in model \"%s\".\n", | ^~ In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:94: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 42 and 307 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:9119:15: note: in expansion of macro ‘PRINTFB’ 9119 | PRINTFB(G, FB_Editor, FB_Actions) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘int ExecutiveSetBondSettingFromString(PyMOLGlobals*, int, const char*, const char*, const char*, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11551:28: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 11551 | " Setting: %s set for %d bonds in object \"%s\".\n", | ^~ 11552 | name, nSet, obj->Name ENDF(G); | ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11551:17: note: directive argument in the range [1, 2147483647] 11551 | " Setting: %s set for %d bonds in object \"%s\".\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output between 42 and 560 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11550:15: note: in expansion of macro ‘PRINTF’ 11550 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘PyObject* ExecutiveGetBondSetting(PyMOLGlobals*, int, char*, const char*, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11632:26: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 11632 | " Getting: %s for %d bonds in object \"%s\".\n", | ^~ 11633 | name, nSet, obj->Name ENDF(G); | ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11632:15: note: directive argument in the range [1, 2147483647] 11632 | " Getting: %s for %d bonds in object \"%s\".\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output between 38 and 556 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11631:13: note: in expansion of macro ‘PRINTF’ 11631 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘int ExecutiveSetBondSetting(PyMOLGlobals*, int, PyObject*, const char*, const char*, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11732:62: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size between 208 and 217 [-Wformat-truncation=] 11732 | " Setting: %s set for %d bonds in object \"%s\".\n", | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output 42 or more bytes (assuming 306) into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11731:17: note: in expansion of macro ‘PRINTF’ 11731 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘int ExecutiveUnsetBondSetting(PyMOLGlobals*, int, const char*, const char*, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11811:26: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 11811 | " Setting: %s unset for %d bonds in object \"%s\".\n", | ^~ 11812 | name, nSet, rec->obj->Name ENDF(G); | ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11811:15: note: directive argument in the range [1, 2147483647] 11811 | " Setting: %s unset for %d bonds in object \"%s\".\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output between 44 and 562 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11810:13: note: in expansion of macro ‘PRINTF’ 11810 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘int ExecutiveSetObjSettingFromString(PyMOLGlobals*, int, const char*, pymol::CObject*, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12353:30: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 12353 | " Setting: %s set to %s in object \"%s\", state %d.\n", | ^~ 12354 | name, value2, obj->Name, state + 1 ENDF(G); | ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12353:19: note: directive argument in the range [1, 2147483647] 12353 | " Setting: %s set to %s in object \"%s\", state %d.\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output between 43 and 1584 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12352:17: note: in expansion of macro ‘PRINTF’ 12352 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12345:30: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 12345 | " Setting: %s set to %s in object \"%s\".\n", | ^~ 12346 | name, value2, obj->Name ENDF(G); | ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output between 34 and 1566 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12344:17: note: in expansion of macro ‘PRINTF’ 12344 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12324:29: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 12324 | PRINTF " Setting: %s set to %s.\n", name, value2 ENDF(G); | ^~ ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output between 21 and 1298 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12324:11: note: in expansion of macro ‘PRINTF’ 12324 | PRINTF " Setting: %s set to %s.\n", name, value2 ENDF(G); | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘int ExecutiveSetSettingFromString(PyMOLGlobals*, int, const char*, const char*, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12256:36: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 12256 | " Setting: %s set for %d atoms in object \"%s\".\n", | ^~ 12257 | name, op.i4, rec->obj->Name ENDF(G); | ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output between 42 and 561 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12255:23: note: in expansion of macro ‘PRINTF’ 12255 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12224:32: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 12224 | " Setting: %s set to %s in %d objects, state %d.\n", | ^~ 12225 | name, value2, nObj, state + 1 ENDF(G); | ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12224:21: note: directive argument in the range [1, 2147483647] 12224 | " Setting: %s set to %s in %d objects, state %d.\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12224:21: note: directive argument in the range [1, 2147483647] /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output between 43 and 1338 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12223:19: note: in expansion of macro ‘PRINTF’ 12223 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12221:32: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 12221 | " Setting: %s set to %s in %d objects.\n", name, value2, nObj ENDF(G); | ^~ ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12221:21: note: directive argument in the range [1, 2147483647] 12221 | " Setting: %s set to %s in %d objects.\n", name, value2, nObj ENDF(G); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output between 34 and 1320 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12220:19: note: in expansion of macro ‘PRINTF’ 12220 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12288:36: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 12288 | " Setting: %s set to %s in object \"%s\", state %d.\n", | ^~ 12289 | name, value2, rec->obj->Name, state + 1 ENDF(G); | ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12288:25: note: directive argument in the range [1, 2147483647] 12288 | " Setting: %s set to %s in object \"%s\", state %d.\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output between 43 and 1584 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12287:23: note: in expansion of macro ‘PRINTF’ 12287 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12280:36: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 12280 | " Setting: %s set to %s in object \"%s\".\n", | ^~ 12281 | name, value2, rec->obj->Name ENDF(G); | ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output between 34 and 1566 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12279:23: note: in expansion of macro ‘PRINTF’ 12279 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12184:29: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 12184 | PRINTF " Setting: %s set to %s.\n", name, value2 ENDF(G); | ^~ ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output between 21 and 1298 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12184:11: note: in expansion of macro ‘PRINTF’ 12184 | PRINTF " Setting: %s set to %s.\n", name, value2 ENDF(G); | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Selector.cpp: In function ‘int SelectorAssignSS(PyMOLGlobals*, int, int, int, int, ObjectMolecule*, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Selector.cpp:1717:70: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 207 [-Wformat-truncation=] 1717 | " AssignSS-Warning: Ignoring incomplete residue /%s/%s/%s/%d%c ...\n", | ^~ In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Selector.cpp:37: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 59 and 324 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Selector.cpp:1716:19: note: in expansion of macro ‘PRINTFB’ 1716 | PRINTFB(G, FB_Selector, FB_Warnings) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘bool ExecutiveSetSymmetry(PyMOLGlobals*, pymol::zstring_view, int, const CSymmetry&, bool)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5973:46: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 199 [-Wformat-truncation=] 5973 | " %s-Warning: Cannot set symmetry for '%s' (type %s)\n", __func__, | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 84 and 339 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5972:7: note: in expansion of macro ‘PRINTFB’ 5972 | PRINTFB(G, FB_Executive, FB_Warnings) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5982:43: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 202 [-Wformat-truncation=] 5982 | " %s-Details: Updated symmetry for '%s'\n", __func__, obj->Name ENDFB(G); | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 56 and 311 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5981:7: note: in expansion of macro ‘PRINTFB’ 5981 | PRINTFB(G, FB_Executive, FB_Details) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5973:46: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 199 [-Wformat-truncation=] 5973 | " %s-Warning: Cannot set symmetry for '%s' (type %s)\n", __func__, | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 84 and 339 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5972:7: note: in expansion of macro ‘PRINTFB’ 5972 | PRINTFB(G, FB_Executive, FB_Warnings) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘pymol::Result<> ExecutiveUnsetSetting(PyMOLGlobals*, int, pymol::zstring_view, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12465:68: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 215 [-Wformat-truncation=] 12465 | " Setting: %s unset for %d atoms in object \"%s\".\n", | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output 44 or more bytes (assuming 299) into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12464:21: note: in expansion of macro ‘PRINTF’ 12464 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12487:57: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 227 [-Wformat-truncation=] 12487 | " Setting: %s unset in object \"%s\", state %d.\n", | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12487:25: note: directive argument in the range [1, 2147483647] 12487 | " Setting: %s unset in object \"%s\", state %d.\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output 41 or more bytes (assuming 305) into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12486:23: note: in expansion of macro ‘PRINTF’ 12486 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12481:57: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 227 [-Wformat-truncation=] 12481 | " Setting: %s unset in object \"%s\".\n", | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output 32 or more bytes (assuming 287) into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12480:23: note: in expansion of macro ‘PRINTF’ 12480 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In member function ‘virtual int CExecutive::drag(int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:15625:55: warning: ‘%s’ directive writing up to 1023 bytes into a region of size 1013 [-Wformat-overflow=] 15625 | sprintf(I->ReorderLog, "cmd.order(\"%s\",location=\"%s\")\n", | ^~ 15626 | order_input, (location == -2) ? "upper" : "current"); | ~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:15625:26: note: ‘sprintf’ output between 32 and 1057 bytes into a destination of size 1024 15625 | sprintf(I->ReorderLog, "cmd.order(\"%s\",location=\"%s\")\n", | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 15626 | order_input, (location == -2) ? "upper" : "current"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘pymol::Result<> ExecutiveBond(PyMOLGlobals*, const char*, const char*, int, int, int, pymol::zstring_view)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:9484:67: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size between 200 and 210 [-Wformat-truncation=] 9484 | " Valence: %d bond valences adjusted in model \"%s\".\n", cnt, | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 49 and 314 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:9483:17: note: in expansion of macro ‘PRINTFB’ 9483 | PRINTFB(G, FB_Editor, FB_Actions) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:9496:59: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size between 208 and 218 [-Wformat-truncation=] 9496 | " Unbond: %d bonds removed from model \"%s\".\n", | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 41 and 306 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:9495:17: note: in expansion of macro ‘PRINTFB’ 9495 | PRINTFB(G, FB_Editor, FB_Actions) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:9471:53: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size between 214 and 224 [-Wformat-truncation=] 9471 | " Bond: %d bonds added to model \"%s\".\n", cnt, rec->obj->Name | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 35 and 300 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:9470:17: note: in expansion of macro ‘PRINTFB’ 9470 | PRINTFB(G, FB_Editor, FB_Actions) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘pymol::Result<> ExecutiveSetSetting(PyMOLGlobals*, int, PyObject*, pymol::zstring_view, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12004:70: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 217 [-Wformat-truncation=] 12004 | " Setting: %s set for %d atoms in object \"%s\".\n", | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output 42 or more bytes (assuming 297) into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12003:25: note: in expansion of macro ‘PRINTF’ 12003 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11915:42: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 237 [-Wformat-truncation=] 11915 | " Setting: %s set to %s in %d objects, state %d.\n", | ^~ 11916 | name, value, nObj, state + 1 ENDF(G); | ~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11915:21: note: directive argument in the range [1, 2147483647] 11915 | " Setting: %s set to %s in %d objects, state %d.\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11915:21: note: directive argument in the range [1, 2147483647] /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output 43 or more bytes (assuming 1084) into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11914:19: note: in expansion of macro ‘PRINTF’ 11914 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11912:42: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 237 [-Wformat-truncation=] 11912 | " Setting: %s set to %s in %d objects.\n", name, value, nObj ENDF(G); | ^~ ~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11912:21: note: directive argument in the range [1, 2147483647] 11912 | " Setting: %s set to %s in %d objects.\n", name, value, nObj ENDF(G); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output 34 or more bytes (assuming 1066) into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11911:19: note: in expansion of macro ‘PRINTF’ 11911 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12036:46: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 237 [-Wformat-truncation=] 12036 | " Setting: %s set to %s in object \"%s\", state %d.\n", | ^~ 12037 | name, value, rec->obj->Name, state + 1 ENDF(G); | ~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12036:25: note: directive argument in the range [1, 2147483647] 12036 | " Setting: %s set to %s in object \"%s\", state %d.\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output 43 or more bytes (assuming 1330) into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12035:23: note: in expansion of macro ‘PRINTF’ 12035 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12029:46: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 237 [-Wformat-truncation=] 12029 | " Setting: %s set to %s in object \"%s\".\n", | ^~ 12030 | name, value, rec->obj->Name ENDF(G); | ~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output 34 or more bytes (assuming 1312) into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12028:23: note: in expansion of macro ‘PRINTF’ 12028 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11871:39: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 237 [-Wformat-truncation=] 11871 | PRINTF " Setting: %s set to %s.\n", name, value ENDF(G); | ^~ ~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output 21 or more bytes (assuming 1044) into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11871:11: note: in expansion of macro ‘PRINTF’ 11871 | PRINTF " Setting: %s set to %s.\n", name, value ENDF(G); | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘void ExecutiveManageObject(PyMOLGlobals*, pymol::CObject*, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:14601:37: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 229 [-Wformat-truncation=] 14601 | " Executive-Warning: name \"%s\" collides with a selection language keyword.\n", | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 73 and 328 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:14600:7: note: in expansion of macro ‘PRINTFB’ 14600 | PRINTFB(G, FB_Executive, FB_Warnings) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:14596:36: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 230 [-Wformat-truncation=] 14596 | " Executive: object name \"%s\" is illegal -- renamed to 'all_'.\n", obj->Name | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 61 and 316 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:14595:7: note: in expansion of macro ‘PRINTFB’ 14595 | PRINTFB(G, FB_Executive, FB_Warnings) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:14627:11: warning: ‘char* strcpy(char*, const char*)’ writing between 1 and 256 bytes into a region of size 0 overflows the destination [-Wstringop-overflow=] 14627 | strcpy(rec->name, obj->Name); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~ cc1plus: note: destination object is likely at address zero /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘int ExecutiveGroup(PyMOLGlobals*, pymol::zstring_view, pymol::zstring_view, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:2275:40: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 235 [-Wformat-truncation=] 2275 | " Executive: adding '%s' to group '%s'.\n", rec.name, rec.group_name | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 36 and 546 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:2274:17: note: in expansion of macro ‘PRINTFB’ 2274 | PRINTFB(G, FB_Executive, FB_Actions) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘pymol::Result > ExecutiveSetName(PyMOLGlobals*, pymol::zstring_view, pymol::zstring_view, bool)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:3535:41: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 222 [-Wformat-truncation=] 3535 | " Warning: Invalid characters in '%s' have been replaced or stripped\n", | ^~ 3536 | name ENDFB(G); | ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 67 and 322 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:3534:5: note: in expansion of macro ‘PRINTFB’ 3534 | PRINTFB(G, FB_Executive, FB_Warnings) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘int ExecutiveSetSession(PyMOLGlobals*, PyObject*, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5097:57: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 213 [-Wformat-truncation=] 5097 | " Executive: skipping unrecognized object \"%s\" of type %d.\n", | ^~ In function ‘int ExecutiveSetNamedEntries(PyMOLGlobals*, PyObject*, int, int, int)’, inlined from ‘int ExecutiveSetSession(PyMOLGlobals*, PyObject*, int, int)’ at /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5727:38: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 56 and 321 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5096:11: note: in expansion of macro ‘PRINTFB’ 5096 | PRINTFB(G, FB_Executive, FB_Errors) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘int ExecutiveSetSession(PyMOLGlobals*, PyObject*, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5122:58: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 210 [-Wformat-truncation=] 5122 | "ExectiveSetNamedEntries-Error: after object \"%s\".\n", rec->name ENDFB(G); | ^~ In function ‘int ExecutiveSetNamedEntries(PyMOLGlobals*, PyObject*, int, int, int)’, inlined from ‘int ExecutiveSetSession(PyMOLGlobals*, PyObject*, int, int)’ at /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5727:38: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 49 and 304 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5121:9: note: in expansion of macro ‘PRINTFB’ 5121 | PRINTFB(G, FB_Executive, FB_Errors) | ^~~~~~~ [100%] Linking CXX shared library /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/_cmd.cpython-313-aarch64-linux-gnu.so /usr/bin/cmake -E cmake_link_script CMakeFiles/_cmd.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/_cmd.dir/link.d -Wl,-soname,_cmd.cpython-313-aarch64-linux-gnu.so -o /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/_cmd.cpython-313-aarch64-linux-gnu.so CMakeFiles/_cmd.dir/build/generated/ShaderText.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/avsplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/biomoccaplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/carplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/corplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/crdplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dxplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/grdplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/hash.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/inthash.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/mapplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/netcdfplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/offplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c.o CMakeFiles/_cmd.dir/layer0/Bezier.cpp.o CMakeFiles/_cmd.dir/layer0/Block.cpp.o CMakeFiles/_cmd.dir/layer0/CarveHelper.cpp.o CMakeFiles/_cmd.dir/layer0/ContourSurf.cpp.o CMakeFiles/_cmd.dir/layer0/Crystal.cpp.o CMakeFiles/_cmd.dir/layer0/Err.cpp.o CMakeFiles/_cmd.dir/layer0/Feedback.cpp.o CMakeFiles/_cmd.dir/layer0/Field.cpp.o CMakeFiles/_cmd.dir/layer0/File.cpp.o CMakeFiles/_cmd.dir/layer0/GFXManager.cpp.o CMakeFiles/_cmd.dir/layer0/GenericBuffer.cpp.o CMakeFiles/_cmd.dir/layer0/GraphicsUtil.cpp.o CMakeFiles/_cmd.dir/layer0/Isosurf.cpp.o CMakeFiles/_cmd.dir/layer0/Map.cpp.o CMakeFiles/_cmd.dir/layer0/Match.cpp.o CMakeFiles/_cmd.dir/layer0/Matrix.cpp.o CMakeFiles/_cmd.dir/layer0/MemoryDebug.cpp.o CMakeFiles/_cmd.dir/layer0/MemoryUsage.cpp.o CMakeFiles/_cmd.dir/layer0/MyPNG.cpp.o CMakeFiles/_cmd.dir/layer0/Parse.cpp.o CMakeFiles/_cmd.dir/layer0/Pixmap.cpp.o CMakeFiles/_cmd.dir/layer0/PostProcess.cpp.o CMakeFiles/_cmd.dir/layer0/PrintUtils.cpp.o CMakeFiles/_cmd.dir/layer0/ShaderMgr.cpp.o CMakeFiles/_cmd.dir/layer0/ShaderPreprocessor.cpp.o CMakeFiles/_cmd.dir/layer0/ShaderPrg.cpp.o CMakeFiles/_cmd.dir/layer0/Sphere.cpp.o CMakeFiles/_cmd.dir/layer0/TTT.cpp.o CMakeFiles/_cmd.dir/layer0/Tetsurf.cpp.o CMakeFiles/_cmd.dir/layer0/Texture.cpp.o CMakeFiles/_cmd.dir/layer0/Tracker.cpp.o CMakeFiles/_cmd.dir/layer0/Triangle.cpp.o CMakeFiles/_cmd.dir/layer0/Util.cpp.o CMakeFiles/_cmd.dir/layer0/Util2.cpp.o CMakeFiles/_cmd.dir/layer0/Vector.cpp.o CMakeFiles/_cmd.dir/layer0/Word.cpp.o CMakeFiles/_cmd.dir/layer0/ccealignmodule.cpp.o CMakeFiles/_cmd.dir/layer0/marching_cubes.cpp.o CMakeFiles/_cmd.dir/layer0/os_gl.cpp.o CMakeFiles/_cmd.dir/layer1/Basis.cpp.o CMakeFiles/_cmd.dir/layer1/ButMode.cpp.o CMakeFiles/_cmd.dir/layer1/CGO.cpp.o CMakeFiles/_cmd.dir/layer1/CGOGL.cpp.o CMakeFiles/_cmd.dir/layer1/CGORenderer.cpp.o CMakeFiles/_cmd.dir/layer1/COLLADA.cpp.o CMakeFiles/_cmd.dir/layer1/Camera.cpp.o CMakeFiles/_cmd.dir/layer1/Character.cpp.o CMakeFiles/_cmd.dir/layer1/Color.cpp.o CMakeFiles/_cmd.dir/layer1/Control.cpp.o CMakeFiles/_cmd.dir/layer1/Extrude.cpp.o CMakeFiles/_cmd.dir/layer1/Font.cpp.o CMakeFiles/_cmd.dir/layer1/FontGLUT.cpp.o CMakeFiles/_cmd.dir/layer1/FontGLUT8x13.cpp.o CMakeFiles/_cmd.dir/layer1/FontGLUT9x15.cpp.o CMakeFiles/_cmd.dir/layer1/FontGLUTHel10.cpp.o CMakeFiles/_cmd.dir/layer1/FontGLUTHel12.cpp.o CMakeFiles/_cmd.dir/layer1/FontGLUTHel18.cpp.o CMakeFiles/_cmd.dir/layer1/FontType.cpp.o CMakeFiles/_cmd.dir/layer1/ImageUtils.cpp.o CMakeFiles/_cmd.dir/layer1/Movie.cpp.o CMakeFiles/_cmd.dir/layer1/Ortho.cpp.o CMakeFiles/_cmd.dir/layer1/P.cpp.o CMakeFiles/_cmd.dir/layer1/PConv.cpp.o CMakeFiles/_cmd.dir/layer1/Picking.cpp.o CMakeFiles/_cmd.dir/layer1/Pop.cpp.o CMakeFiles/_cmd.dir/layer1/PyMOLObject.cpp.o CMakeFiles/_cmd.dir/layer1/Ray.cpp.o CMakeFiles/_cmd.dir/layer1/Rep.cpp.o CMakeFiles/_cmd.dir/layer1/Scene.cpp.o CMakeFiles/_cmd.dir/layer1/SceneMouse.cpp.o CMakeFiles/_cmd.dir/layer1/ScenePicking.cpp.o CMakeFiles/_cmd.dir/layer1/SceneRay.cpp.o CMakeFiles/_cmd.dir/layer1/SceneRender.cpp.o CMakeFiles/_cmd.dir/layer1/SceneView.cpp.o CMakeFiles/_cmd.dir/layer1/ScrollBar.cpp.o CMakeFiles/_cmd.dir/layer1/Seq.cpp.o CMakeFiles/_cmd.dir/layer1/Setting.cpp.o CMakeFiles/_cmd.dir/layer1/Shaker.cpp.o CMakeFiles/_cmd.dir/layer1/SymOp.cpp.o CMakeFiles/_cmd.dir/layer1/SymOpPConv.cpp.o CMakeFiles/_cmd.dir/layer1/SymOpTools.cpp.o CMakeFiles/_cmd.dir/layer1/Symmetry.cpp.o CMakeFiles/_cmd.dir/layer1/Text.cpp.o CMakeFiles/_cmd.dir/layer1/TypeFace.cpp.o CMakeFiles/_cmd.dir/layer1/View.cpp.o CMakeFiles/_cmd.dir/layer1/Wizard.cpp.o CMakeFiles/_cmd.dir/layer2/AssemblyHelpers.cpp.o CMakeFiles/_cmd.dir/layer2/AtomInfo.cpp.o CMakeFiles/_cmd.dir/layer2/AtomInfoHistory.cpp.o CMakeFiles/_cmd.dir/layer2/BondTypeHistory.cpp.o CMakeFiles/_cmd.dir/layer2/CifFile.cpp.o CMakeFiles/_cmd.dir/layer2/CifMoleculeReader.cpp.o CMakeFiles/_cmd.dir/layer2/CoordSet.cpp.o CMakeFiles/_cmd.dir/layer2/DistSet.cpp.o CMakeFiles/_cmd.dir/layer2/GadgetSet.cpp.o CMakeFiles/_cmd.dir/layer2/HydrogenAdder.cpp.o CMakeFiles/_cmd.dir/layer2/MmodTyping.cpp.o CMakeFiles/_cmd.dir/layer2/MmtfMoleculeReader.cpp.o CMakeFiles/_cmd.dir/layer2/Mol2Typing.cpp.o CMakeFiles/_cmd.dir/layer2/MolV3000.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectAlignment.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectCGO.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectCallback.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectCurve.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectDist.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectGadget.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectGadgetRamp.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectGroup.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectMap.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectMesh.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectMolecule.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectMolecule2.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectMolecule3.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectSlice.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectSurface.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectVolume.cpp.o CMakeFiles/_cmd.dir/layer2/RepAngle.cpp.o CMakeFiles/_cmd.dir/layer2/RepCartoon.cpp.o CMakeFiles/_cmd.dir/layer2/RepCylBond.cpp.o CMakeFiles/_cmd.dir/layer2/RepDihedral.cpp.o CMakeFiles/_cmd.dir/layer2/RepDistDash.cpp.o CMakeFiles/_cmd.dir/layer2/RepDistLabel.cpp.o CMakeFiles/_cmd.dir/layer2/RepDot.cpp.o CMakeFiles/_cmd.dir/layer2/RepEllipsoid.cpp.o CMakeFiles/_cmd.dir/layer2/RepLabel.cpp.o CMakeFiles/_cmd.dir/layer2/RepMesh.cpp.o CMakeFiles/_cmd.dir/layer2/RepNonbonded.cpp.o CMakeFiles/_cmd.dir/layer2/RepNonbondedSphere.cpp.o CMakeFiles/_cmd.dir/layer2/RepRibbon.cpp.o CMakeFiles/_cmd.dir/layer2/RepSphere.cpp.o CMakeFiles/_cmd.dir/layer2/RepSphereGenerate.cpp.o CMakeFiles/_cmd.dir/layer2/RepSphereImmediate.cpp.o CMakeFiles/_cmd.dir/layer2/RepSurface.cpp.o CMakeFiles/_cmd.dir/layer2/RepWireBond.cpp.o CMakeFiles/_cmd.dir/layer2/Sculpt.cpp.o CMakeFiles/_cmd.dir/layer2/SculptCache.cpp.o CMakeFiles/_cmd.dir/layer2/SideChainHelper.cpp.o CMakeFiles/_cmd.dir/layer2/VFont.cpp.o CMakeFiles/_cmd.dir/layer3/AtomIterators.cpp.o CMakeFiles/_cmd.dir/layer3/CifDataValueFormatter.cpp.o CMakeFiles/_cmd.dir/layer3/Editor.cpp.o CMakeFiles/_cmd.dir/layer3/Executive.cpp.o CMakeFiles/_cmd.dir/layer3/ExecutivePython.cpp.o CMakeFiles/_cmd.dir/layer3/Interactions.cpp.o CMakeFiles/_cmd.dir/layer3/MaeExportHelpers.cpp.o CMakeFiles/_cmd.dir/layer3/MoleculeExporter.cpp.o CMakeFiles/_cmd.dir/layer3/MovieScene.cpp.o CMakeFiles/_cmd.dir/layer3/PlugIOManager.cpp.o CMakeFiles/_cmd.dir/layer3/RingFinder.cpp.o CMakeFiles/_cmd.dir/layer3/Seeker.cpp.o CMakeFiles/_cmd.dir/layer3/Selector.cpp.o CMakeFiles/_cmd.dir/layer3/SelectorTmp.cpp.o CMakeFiles/_cmd.dir/layer3/SpecRec.cpp.o CMakeFiles/_cmd.dir/layer3/SpecRecSpecial.cpp.o CMakeFiles/_cmd.dir/layer4/Cmd.cpp.o CMakeFiles/_cmd.dir/layer4/Menu.cpp.o CMakeFiles/_cmd.dir/layer4/PopUp.cpp.o CMakeFiles/_cmd.dir/layer5/PyMOL.cpp.o CMakeFiles/_cmd.dir/layer5/TestPyMOL.cpp.o CMakeFiles/_cmd.dir/layer5/main.cpp.o CMakeFiles/_cmd.dir/ov/src/OVContext.cpp.o CMakeFiles/_cmd.dir/ov/src/OVHeap.cpp.o CMakeFiles/_cmd.dir/ov/src/OVHeapArray.cpp.o CMakeFiles/_cmd.dir/ov/src/OVLexicon.cpp.o CMakeFiles/_cmd.dir/ov/src/OVOneToAny.cpp.o CMakeFiles/_cmd.dir/ov/src/OVOneToOne.cpp.o CMakeFiles/_cmd.dir/ov/src/OVRandom.cpp.o CMakeFiles/_cmd.dir/ov/src/ov_utility.cpp.o -lpng -lfreetype -lxml2 -lGL -lGLEW -lnetcdf -fopenmp gmake[3]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd' [100%] Built target _cmd gmake[2]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd/CMakeFiles 0 gmake[1]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd' cmake /build/reproducible-path/pymol-3.1.0+dfsg -DTARGET_NAME=_champ -DCMAKE_LIBRARY_OUTPUT_DIRECTORY=/build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/champ -DCMAKE_BUILD_TYPE=Release -DALL_INC_DIR=contrib/champ;/usr/include/python3.13;/usr/include/python3.13; -DALL_SRC=contrib/champ/champ.c;contrib/champ/champ_module.c;contrib/champ/chiral.c;contrib/champ/err2.c;contrib/champ/feedback2.c;contrib/champ/list.c;contrib/champ/os_memory.c;contrib/champ/sort.c;contrib/champ/strblock.c;contrib/champ/vla.c; -DALL_DEF= -DALL_LIB_DIR=/usr/lib; -DALL_LIB= -DALL_COMP_ARGS= -DALL_EXT_LINK= -DSHARED_SUFFIX=.cpython-313-aarch64-linux-gnu.so -- The C compiler identification is GNU 15.2.0 -- The CXX compiler identification is GNU 15.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Configuring done (0.6s) -- Generating done (0.0s) -- Build files have been written to: /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_champ cmake --build . --config Release -j12 gmake[1]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_champ' /usr/bin/cmake -S/build/reproducible-path/pymol-3.1.0+dfsg -B/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_champ --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_champ/CMakeFiles /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_champ//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[2]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_champ' /usr/bin/gmake -f CMakeFiles/_champ.dir/build.make CMakeFiles/_champ.dir/depend gmake[3]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_champ' cd /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_champ && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/pymol-3.1.0+dfsg /build/reproducible-path/pymol-3.1.0+dfsg /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_champ /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_champ /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_champ/CMakeFiles/_champ.dir/DependInfo.cmake "--color=" _champ gmake[3]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_champ' /usr/bin/gmake -f CMakeFiles/_champ.dir/build.make CMakeFiles/_champ.dir/build gmake[3]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_champ' [ 9%] Building C object CMakeFiles/_champ.dir/contrib/champ/champ_module.c.o [ 18%] Building C object CMakeFiles/_champ.dir/contrib/champ/champ.c.o [ 27%] Building C object CMakeFiles/_champ.dir/contrib/champ/feedback2.c.o [ 36%] Building C object CMakeFiles/_champ.dir/contrib/champ/chiral.c.o [ 45%] Building C object CMakeFiles/_champ.dir/contrib/champ/err2.c.o /usr/bin/cc -D_champ_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/champ -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -MD -MT CMakeFiles/_champ.dir/contrib/champ/champ.c.o -MF CMakeFiles/_champ.dir/contrib/champ/champ.c.o.d -o CMakeFiles/_champ.dir/contrib/champ/champ.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/champ/champ.c /usr/bin/cc -D_champ_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/champ -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -MD -MT CMakeFiles/_champ.dir/contrib/champ/champ_module.c.o -MF CMakeFiles/_champ.dir/contrib/champ/champ_module.c.o.d -o CMakeFiles/_champ.dir/contrib/champ/champ_module.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/champ/champ_module.c [ 54%] Building C object CMakeFiles/_champ.dir/contrib/champ/list.c.o /usr/bin/cc -D_champ_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/champ -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -MD -MT CMakeFiles/_champ.dir/contrib/champ/err2.c.o -MF CMakeFiles/_champ.dir/contrib/champ/err2.c.o.d -o CMakeFiles/_champ.dir/contrib/champ/err2.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/champ/err2.c /usr/bin/cc -D_champ_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/champ -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -MD -MT CMakeFiles/_champ.dir/contrib/champ/chiral.c.o -MF CMakeFiles/_champ.dir/contrib/champ/chiral.c.o.d -o CMakeFiles/_champ.dir/contrib/champ/chiral.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/champ/chiral.c /usr/bin/cc -D_champ_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/champ -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -MD -MT CMakeFiles/_champ.dir/contrib/champ/feedback2.c.o -MF CMakeFiles/_champ.dir/contrib/champ/feedback2.c.o.d -o CMakeFiles/_champ.dir/contrib/champ/feedback2.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/champ/feedback2.c /usr/bin/cc -D_champ_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/champ -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -MD -MT CMakeFiles/_champ.dir/contrib/champ/list.c.o -MF CMakeFiles/_champ.dir/contrib/champ/list.c.o.d -o CMakeFiles/_champ.dir/contrib/champ/list.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/champ/list.c [ 72%] Building C object CMakeFiles/_champ.dir/contrib/champ/sort.c.o [ 72%] Building C object CMakeFiles/_champ.dir/contrib/champ/vla.c.o [ 81%] Building C object CMakeFiles/_champ.dir/contrib/champ/os_memory.c.o /usr/bin/cc -D_champ_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/champ -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -MD -MT CMakeFiles/_champ.dir/contrib/champ/vla.c.o -MF CMakeFiles/_champ.dir/contrib/champ/vla.c.o.d -o CMakeFiles/_champ.dir/contrib/champ/vla.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/champ/vla.c [ 90%] Building C object CMakeFiles/_champ.dir/contrib/champ/strblock.c.o /usr/bin/cc -D_champ_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/champ -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -MD -MT CMakeFiles/_champ.dir/contrib/champ/os_memory.c.o -MF CMakeFiles/_champ.dir/contrib/champ/os_memory.c.o.d -o CMakeFiles/_champ.dir/contrib/champ/os_memory.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/champ/os_memory.c /usr/bin/cc -D_champ_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/champ -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -MD -MT CMakeFiles/_champ.dir/contrib/champ/sort.c.o -MF CMakeFiles/_champ.dir/contrib/champ/sort.c.o.d -o CMakeFiles/_champ.dir/contrib/champ/sort.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/champ/sort.c /usr/bin/cc -D_champ_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/champ -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -MD -MT CMakeFiles/_champ.dir/contrib/champ/strblock.c.o -MF CMakeFiles/_champ.dir/contrib/champ/strblock.c.o.d -o CMakeFiles/_champ.dir/contrib/champ/strblock.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/champ/strblock.c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/champ/os_memory.c: In function ‘OSMemoryZero’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/champ/os_memory.c:55:18: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] 55 | while(count&&(((int)p)&mask)) { | ^ [100%] Linking C shared library /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/champ/_champ.cpython-313-aarch64-linux-gnu.so /usr/bin/cmake -E cmake_link_script CMakeFiles/_champ.dir/link.txt --verbose=1 /usr/bin/cc -fPIC -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/_champ.dir/link.d -Wl,-soname,_champ.cpython-313-aarch64-linux-gnu.so -o /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/champ/_champ.cpython-313-aarch64-linux-gnu.so CMakeFiles/_champ.dir/contrib/champ/champ.c.o CMakeFiles/_champ.dir/contrib/champ/champ_module.c.o CMakeFiles/_champ.dir/contrib/champ/chiral.c.o CMakeFiles/_champ.dir/contrib/champ/err2.c.o CMakeFiles/_champ.dir/contrib/champ/feedback2.c.o CMakeFiles/_champ.dir/contrib/champ/list.c.o CMakeFiles/_champ.dir/contrib/champ/os_memory.c.o CMakeFiles/_champ.dir/contrib/champ/sort.c.o CMakeFiles/_champ.dir/contrib/champ/strblock.c.o CMakeFiles/_champ.dir/contrib/champ/vla.c.o gmake[3]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_champ' [100%] Built target _champ gmake[2]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_champ' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_champ/CMakeFiles 0 gmake[1]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_champ' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg' echo "FIXME: Test ends up with: AttributeError: module 'pymol' has no attribute 'start_pymol'" FIXME: Test ends up with: AttributeError: module 'pymol' has no attribute 'start_pymol' echo "Unfortunately upstream has removed the script that was used for testing from upstream source" Unfortunately upstream has removed the script that was used for testing from upstream source make[1]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg' create-stamp debian/debhelper-build-stamp dh_testroot -a -O--buildsystem=pybuild dh_prep -a -O--buildsystem=pybuild dh_auto_install -a -O--buildsystem=pybuild I: pybuild base:385: /usr/bin/python3.14 setup.py install --root /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol /usr/lib/python3/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated !! ******************************************************************************** Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). This deprecation is overdue, please update your project and remove deprecated calls to avoid build errors in the future. See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! corresp(dist, value, root_dir) running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running build running build_py running egg_info writing modules/pymol.egg-info/PKG-INFO /usr/lib/python3/dist-packages/setuptools/_core_metadata.py:163: SetuptoolsDeprecationWarning: Invalid config. !! ******************************************************************************** newlines are not allowed in `summary` and will break in the future ******************************************************************************** !! write_field('Summary', single_line(summary)) writing dependency_links to modules/pymol.egg-info/dependency_links.txt writing entry points to modules/pymol.egg-info/entry_points.txt writing requirements to modules/pymol.egg-info/requires.txt writing top-level names to modules/pymol.egg-info/top_level.txt reading manifest file 'modules/pymol.egg-info/SOURCES.txt' adding license file 'LICENSE' adding license file 'AUTHORS' writing manifest file 'modules/pymol.egg-info/SOURCES.txt' running build_ext cmake /build/reproducible-path/pymol-3.1.0+dfsg -DTARGET_NAME=_cmd -DCMAKE_LIBRARY_OUTPUT_DIRECTORY=/build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol -DCMAKE_BUILD_TYPE=Release -DALL_INC_DIR=include;contrib/uiuc/plugins/include;ov/src;layer0;layer1;layer2;layer3;layer4;layer5;build/generated;contrib/uiuc/plugins/molfile_plugin/src;/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include;/usr/include;/usr/include/freetype2;/usr/include/libxml2;/usr/include/python3.14;/usr/include/python3.14; -DALL_SRC=build/generated/ShaderText.cpp;contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c;contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c;contrib/uiuc/plugins/molfile_plugin/src/avsplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.c;contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c;contrib/uiuc/plugins/molfile_plugin/src/biomoccaplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/carplugin.c;contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/corplugin.c;contrib/uiuc/plugins/molfile_plugin/src/crdplugin.c;contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c;contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c;contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/dxplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c;contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/grdplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/hash.c;contrib/uiuc/plugins/molfile_plugin/src/inthash.c;contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c;contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/mapplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c;contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c;contrib/uiuc/plugins/molfile_plugin/src/netcdfplugin.c;contrib/uiuc/plugins/molfile_plugin/src/offplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c;contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c;contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c;contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c;contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c;contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c;layer0/Bezier.cpp;layer0/Block.cpp;layer0/CarveHelper.cpp;layer0/ContourSurf.cpp;layer0/Crystal.cpp;layer0/Err.cpp;layer0/Feedback.cpp;layer0/Field.cpp;layer0/File.cpp;layer0/GFXManager.cpp;layer0/GenericBuffer.cpp;layer0/GraphicsUtil.cpp;layer0/Isosurf.cpp;layer0/Map.cpp;layer0/Match.cpp;layer0/Matrix.cpp;layer0/MemoryDebug.cpp;layer0/MemoryUsage.cpp;layer0/MyPNG.cpp;layer0/Parse.cpp;layer0/Pixmap.cpp;layer0/PostProcess.cpp;layer0/PrintUtils.cpp;layer0/ShaderMgr.cpp;layer0/ShaderPreprocessor.cpp;layer0/ShaderPrg.cpp;layer0/Sphere.cpp;layer0/TTT.cpp;layer0/Tetsurf.cpp;layer0/Texture.cpp;layer0/Tracker.cpp;layer0/Triangle.cpp;layer0/Util.cpp;layer0/Util2.cpp;layer0/Vector.cpp;layer0/Word.cpp;layer0/ccealignmodule.cpp;layer0/marching_cubes.cpp;layer0/os_gl.cpp;layer1/Basis.cpp;layer1/ButMode.cpp;layer1/CGO.cpp;layer1/CGOGL.cpp;layer1/CGORenderer.cpp;layer1/COLLADA.cpp;layer1/Camera.cpp;layer1/Character.cpp;layer1/Color.cpp;layer1/Control.cpp;layer1/Extrude.cpp;layer1/Font.cpp;layer1/FontGLUT.cpp;layer1/FontGLUT8x13.cpp;layer1/FontGLUT9x15.cpp;layer1/FontGLUTHel10.cpp;layer1/FontGLUTHel12.cpp;layer1/FontGLUTHel18.cpp;layer1/FontType.cpp;layer1/ImageUtils.cpp;layer1/Movie.cpp;layer1/Ortho.cpp;layer1/P.cpp;layer1/PConv.cpp;layer1/Picking.cpp;layer1/Pop.cpp;layer1/PyMOLObject.cpp;layer1/Ray.cpp;layer1/Rep.cpp;layer1/Scene.cpp;layer1/SceneMouse.cpp;layer1/ScenePicking.cpp;layer1/SceneRay.cpp;layer1/SceneRender.cpp;layer1/SceneView.cpp;layer1/ScrollBar.cpp;layer1/Seq.cpp;layer1/Setting.cpp;layer1/Shaker.cpp;layer1/SymOp.cpp;layer1/SymOpPConv.cpp;layer1/SymOpTools.cpp;layer1/Symmetry.cpp;layer1/Text.cpp;layer1/TypeFace.cpp;layer1/View.cpp;layer1/Wizard.cpp;layer2/AssemblyHelpers.cpp;layer2/AtomInfo.cpp;layer2/AtomInfoHistory.cpp;layer2/BondTypeHistory.cpp;layer2/CifFile.cpp;layer2/CifMoleculeReader.cpp;layer2/CoordSet.cpp;layer2/DistSet.cpp;layer2/GadgetSet.cpp;layer2/HydrogenAdder.cpp;layer2/MmodTyping.cpp;layer2/MmtfMoleculeReader.cpp;layer2/Mol2Typing.cpp;layer2/MolV3000.cpp;layer2/ObjectAlignment.cpp;layer2/ObjectCGO.cpp;layer2/ObjectCallback.cpp;layer2/ObjectCurve.cpp;layer2/ObjectDist.cpp;layer2/ObjectGadget.cpp;layer2/ObjectGadgetRamp.cpp;layer2/ObjectGroup.cpp;layer2/ObjectMap.cpp;layer2/ObjectMesh.cpp;layer2/ObjectMolecule.cpp;layer2/ObjectMolecule2.cpp;layer2/ObjectMolecule3.cpp;layer2/ObjectSlice.cpp;layer2/ObjectSurface.cpp;layer2/ObjectVolume.cpp;layer2/RepAngle.cpp;layer2/RepCartoon.cpp;layer2/RepCylBond.cpp;layer2/RepDihedral.cpp;layer2/RepDistDash.cpp;layer2/RepDistLabel.cpp;layer2/RepDot.cpp;layer2/RepEllipsoid.cpp;layer2/RepLabel.cpp;layer2/RepMesh.cpp;layer2/RepNonbonded.cpp;layer2/RepNonbondedSphere.cpp;layer2/RepRibbon.cpp;layer2/RepSphere.cpp;layer2/RepSphereGenerate.cpp;layer2/RepSphereImmediate.cpp;layer2/RepSurface.cpp;layer2/RepWireBond.cpp;layer2/Sculpt.cpp;layer2/SculptCache.cpp;layer2/SideChainHelper.cpp;layer2/VFont.cpp;layer3/AtomIterators.cpp;layer3/CifDataValueFormatter.cpp;layer3/Editor.cpp;layer3/Executive.cpp;layer3/ExecutivePython.cpp;layer3/Interactions.cpp;layer3/MaeExportHelpers.cpp;layer3/MoleculeExporter.cpp;layer3/MovieScene.cpp;layer3/PlugIOManager.cpp;layer3/RingFinder.cpp;layer3/Seeker.cpp;layer3/Selector.cpp;layer3/SelectorTmp.cpp;layer3/SpecRec.cpp;layer3/SpecRecSpecial.cpp;layer4/Cmd.cpp;layer4/Menu.cpp;layer4/PopUp.cpp;layer5/PyMOL.cpp;layer5/TestPyMOL.cpp;layer5/main.cpp;ov/src/OVContext.cpp;ov/src/OVHeap.cpp;ov/src/OVHeapArray.cpp;ov/src/OVLexicon.cpp;ov/src/OVOneToAny.cpp;ov/src/OVOneToOne.cpp;ov/src/OVRandom.cpp;ov/src/ov_utility.cpp; -DALL_DEF=_PYMOL_LIBPNG;_PYMOL_FREETYPE;PYMOL_OPENMP;_PYMOL_VMD_PLUGINS;_HAVE_LIBXML;_PYMOL_NO_MSGPACKC;_PYMOL_NO_MAIN;_PYMOL_NUMPY; -DALL_LIB_DIR=/usr/lib; -DALL_LIB=png;freetype;xml2;GL;GLEW;netcdf; -DALL_COMP_ARGS=-Werror=return-type;-Wunused-variable;-Wno-switch;-Wno-narrowing;-Wno-char-subscripts;-O3;-fopenmp; -DALL_EXT_LINK=-fopenmp -DSHARED_SUFFIX=.cpython-314-aarch64-linux-gnu.so -- Configuring done (0.0s) -- Generating done (0.0s) -- Build files have been written to: /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd cmake --build . --config Release -j12 gmake[1]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd' /usr/bin/cmake -S/build/reproducible-path/pymol-3.1.0+dfsg -B/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd/CMakeFiles /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[2]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd' /usr/bin/gmake -f CMakeFiles/_cmd.dir/build.make CMakeFiles/_cmd.dir/depend gmake[3]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd' cd /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/pymol-3.1.0+dfsg /build/reproducible-path/pymol-3.1.0+dfsg /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd/CMakeFiles/_cmd.dir/DependInfo.cmake "--color=" _cmd gmake[3]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd' /usr/bin/gmake -f CMakeFiles/_cmd.dir/build.make CMakeFiles/_cmd.dir/build gmake[3]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd' [ 1%] Building CXX object CMakeFiles/_cmd.dir/layer4/Cmd.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer4/Cmd.cpp.o -MF CMakeFiles/_cmd.dir/layer4/Cmd.cpp.o.d -o CMakeFiles/_cmd.dir/layer4/Cmd.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer4/Cmd.cpp [ 2%] Linking CXX shared library /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/_cmd.cpython-314-aarch64-linux-gnu.so /usr/bin/cmake -E cmake_link_script CMakeFiles/_cmd.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/_cmd.dir/link.d -Wl,-soname,_cmd.cpython-314-aarch64-linux-gnu.so -o /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/_cmd.cpython-314-aarch64-linux-gnu.so CMakeFiles/_cmd.dir/build/generated/ShaderText.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/avsplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/biomoccaplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/carplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/corplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/crdplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dxplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/grdplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/hash.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/inthash.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/mapplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/netcdfplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/offplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c.o CMakeFiles/_cmd.dir/layer0/Bezier.cpp.o CMakeFiles/_cmd.dir/layer0/Block.cpp.o CMakeFiles/_cmd.dir/layer0/CarveHelper.cpp.o CMakeFiles/_cmd.dir/layer0/ContourSurf.cpp.o CMakeFiles/_cmd.dir/layer0/Crystal.cpp.o CMakeFiles/_cmd.dir/layer0/Err.cpp.o CMakeFiles/_cmd.dir/layer0/Feedback.cpp.o CMakeFiles/_cmd.dir/layer0/Field.cpp.o CMakeFiles/_cmd.dir/layer0/File.cpp.o CMakeFiles/_cmd.dir/layer0/GFXManager.cpp.o CMakeFiles/_cmd.dir/layer0/GenericBuffer.cpp.o CMakeFiles/_cmd.dir/layer0/GraphicsUtil.cpp.o CMakeFiles/_cmd.dir/layer0/Isosurf.cpp.o CMakeFiles/_cmd.dir/layer0/Map.cpp.o CMakeFiles/_cmd.dir/layer0/Match.cpp.o CMakeFiles/_cmd.dir/layer0/Matrix.cpp.o CMakeFiles/_cmd.dir/layer0/MemoryDebug.cpp.o CMakeFiles/_cmd.dir/layer0/MemoryUsage.cpp.o CMakeFiles/_cmd.dir/layer0/MyPNG.cpp.o CMakeFiles/_cmd.dir/layer0/Parse.cpp.o CMakeFiles/_cmd.dir/layer0/Pixmap.cpp.o CMakeFiles/_cmd.dir/layer0/PostProcess.cpp.o CMakeFiles/_cmd.dir/layer0/PrintUtils.cpp.o CMakeFiles/_cmd.dir/layer0/ShaderMgr.cpp.o CMakeFiles/_cmd.dir/layer0/ShaderPreprocessor.cpp.o CMakeFiles/_cmd.dir/layer0/ShaderPrg.cpp.o CMakeFiles/_cmd.dir/layer0/Sphere.cpp.o CMakeFiles/_cmd.dir/layer0/TTT.cpp.o CMakeFiles/_cmd.dir/layer0/Tetsurf.cpp.o CMakeFiles/_cmd.dir/layer0/Texture.cpp.o CMakeFiles/_cmd.dir/layer0/Tracker.cpp.o CMakeFiles/_cmd.dir/layer0/Triangle.cpp.o CMakeFiles/_cmd.dir/layer0/Util.cpp.o CMakeFiles/_cmd.dir/layer0/Util2.cpp.o CMakeFiles/_cmd.dir/layer0/Vector.cpp.o CMakeFiles/_cmd.dir/layer0/Word.cpp.o CMakeFiles/_cmd.dir/layer0/ccealignmodule.cpp.o CMakeFiles/_cmd.dir/layer0/marching_cubes.cpp.o CMakeFiles/_cmd.dir/layer0/os_gl.cpp.o CMakeFiles/_cmd.dir/layer1/Basis.cpp.o CMakeFiles/_cmd.dir/layer1/ButMode.cpp.o CMakeFiles/_cmd.dir/layer1/CGO.cpp.o CMakeFiles/_cmd.dir/layer1/CGOGL.cpp.o CMakeFiles/_cmd.dir/layer1/CGORenderer.cpp.o CMakeFiles/_cmd.dir/layer1/COLLADA.cpp.o CMakeFiles/_cmd.dir/layer1/Camera.cpp.o CMakeFiles/_cmd.dir/layer1/Character.cpp.o CMakeFiles/_cmd.dir/layer1/Color.cpp.o CMakeFiles/_cmd.dir/layer1/Control.cpp.o CMakeFiles/_cmd.dir/layer1/Extrude.cpp.o CMakeFiles/_cmd.dir/layer1/Font.cpp.o CMakeFiles/_cmd.dir/layer1/FontGLUT.cpp.o CMakeFiles/_cmd.dir/layer1/FontGLUT8x13.cpp.o CMakeFiles/_cmd.dir/layer1/FontGLUT9x15.cpp.o CMakeFiles/_cmd.dir/layer1/FontGLUTHel10.cpp.o CMakeFiles/_cmd.dir/layer1/FontGLUTHel12.cpp.o CMakeFiles/_cmd.dir/layer1/FontGLUTHel18.cpp.o CMakeFiles/_cmd.dir/layer1/FontType.cpp.o CMakeFiles/_cmd.dir/layer1/ImageUtils.cpp.o CMakeFiles/_cmd.dir/layer1/Movie.cpp.o CMakeFiles/_cmd.dir/layer1/Ortho.cpp.o CMakeFiles/_cmd.dir/layer1/P.cpp.o CMakeFiles/_cmd.dir/layer1/PConv.cpp.o CMakeFiles/_cmd.dir/layer1/Picking.cpp.o CMakeFiles/_cmd.dir/layer1/Pop.cpp.o CMakeFiles/_cmd.dir/layer1/PyMOLObject.cpp.o CMakeFiles/_cmd.dir/layer1/Ray.cpp.o CMakeFiles/_cmd.dir/layer1/Rep.cpp.o CMakeFiles/_cmd.dir/layer1/Scene.cpp.o CMakeFiles/_cmd.dir/layer1/SceneMouse.cpp.o CMakeFiles/_cmd.dir/layer1/ScenePicking.cpp.o CMakeFiles/_cmd.dir/layer1/SceneRay.cpp.o CMakeFiles/_cmd.dir/layer1/SceneRender.cpp.o CMakeFiles/_cmd.dir/layer1/SceneView.cpp.o CMakeFiles/_cmd.dir/layer1/ScrollBar.cpp.o CMakeFiles/_cmd.dir/layer1/Seq.cpp.o CMakeFiles/_cmd.dir/layer1/Setting.cpp.o CMakeFiles/_cmd.dir/layer1/Shaker.cpp.o CMakeFiles/_cmd.dir/layer1/SymOp.cpp.o CMakeFiles/_cmd.dir/layer1/SymOpPConv.cpp.o CMakeFiles/_cmd.dir/layer1/SymOpTools.cpp.o CMakeFiles/_cmd.dir/layer1/Symmetry.cpp.o CMakeFiles/_cmd.dir/layer1/Text.cpp.o CMakeFiles/_cmd.dir/layer1/TypeFace.cpp.o CMakeFiles/_cmd.dir/layer1/View.cpp.o CMakeFiles/_cmd.dir/layer1/Wizard.cpp.o CMakeFiles/_cmd.dir/layer2/AssemblyHelpers.cpp.o CMakeFiles/_cmd.dir/layer2/AtomInfo.cpp.o CMakeFiles/_cmd.dir/layer2/AtomInfoHistory.cpp.o CMakeFiles/_cmd.dir/layer2/BondTypeHistory.cpp.o CMakeFiles/_cmd.dir/layer2/CifFile.cpp.o CMakeFiles/_cmd.dir/layer2/CifMoleculeReader.cpp.o CMakeFiles/_cmd.dir/layer2/CoordSet.cpp.o CMakeFiles/_cmd.dir/layer2/DistSet.cpp.o CMakeFiles/_cmd.dir/layer2/GadgetSet.cpp.o CMakeFiles/_cmd.dir/layer2/HydrogenAdder.cpp.o CMakeFiles/_cmd.dir/layer2/MmodTyping.cpp.o CMakeFiles/_cmd.dir/layer2/MmtfMoleculeReader.cpp.o CMakeFiles/_cmd.dir/layer2/Mol2Typing.cpp.o CMakeFiles/_cmd.dir/layer2/MolV3000.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectAlignment.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectCGO.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectCallback.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectCurve.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectDist.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectGadget.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectGadgetRamp.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectGroup.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectMap.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectMesh.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectMolecule.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectMolecule2.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectMolecule3.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectSlice.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectSurface.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectVolume.cpp.o CMakeFiles/_cmd.dir/layer2/RepAngle.cpp.o CMakeFiles/_cmd.dir/layer2/RepCartoon.cpp.o CMakeFiles/_cmd.dir/layer2/RepCylBond.cpp.o CMakeFiles/_cmd.dir/layer2/RepDihedral.cpp.o CMakeFiles/_cmd.dir/layer2/RepDistDash.cpp.o CMakeFiles/_cmd.dir/layer2/RepDistLabel.cpp.o CMakeFiles/_cmd.dir/layer2/RepDot.cpp.o CMakeFiles/_cmd.dir/layer2/RepEllipsoid.cpp.o CMakeFiles/_cmd.dir/layer2/RepLabel.cpp.o CMakeFiles/_cmd.dir/layer2/RepMesh.cpp.o CMakeFiles/_cmd.dir/layer2/RepNonbonded.cpp.o CMakeFiles/_cmd.dir/layer2/RepNonbondedSphere.cpp.o CMakeFiles/_cmd.dir/layer2/RepRibbon.cpp.o CMakeFiles/_cmd.dir/layer2/RepSphere.cpp.o CMakeFiles/_cmd.dir/layer2/RepSphereGenerate.cpp.o CMakeFiles/_cmd.dir/layer2/RepSphereImmediate.cpp.o CMakeFiles/_cmd.dir/layer2/RepSurface.cpp.o CMakeFiles/_cmd.dir/layer2/RepWireBond.cpp.o CMakeFiles/_cmd.dir/layer2/Sculpt.cpp.o CMakeFiles/_cmd.dir/layer2/SculptCache.cpp.o CMakeFiles/_cmd.dir/layer2/SideChainHelper.cpp.o CMakeFiles/_cmd.dir/layer2/VFont.cpp.o CMakeFiles/_cmd.dir/layer3/AtomIterators.cpp.o CMakeFiles/_cmd.dir/layer3/CifDataValueFormatter.cpp.o CMakeFiles/_cmd.dir/layer3/Editor.cpp.o CMakeFiles/_cmd.dir/layer3/Executive.cpp.o CMakeFiles/_cmd.dir/layer3/ExecutivePython.cpp.o CMakeFiles/_cmd.dir/layer3/Interactions.cpp.o CMakeFiles/_cmd.dir/layer3/MaeExportHelpers.cpp.o CMakeFiles/_cmd.dir/layer3/MoleculeExporter.cpp.o CMakeFiles/_cmd.dir/layer3/MovieScene.cpp.o CMakeFiles/_cmd.dir/layer3/PlugIOManager.cpp.o CMakeFiles/_cmd.dir/layer3/RingFinder.cpp.o CMakeFiles/_cmd.dir/layer3/Seeker.cpp.o CMakeFiles/_cmd.dir/layer3/Selector.cpp.o CMakeFiles/_cmd.dir/layer3/SelectorTmp.cpp.o CMakeFiles/_cmd.dir/layer3/SpecRec.cpp.o CMakeFiles/_cmd.dir/layer3/SpecRecSpecial.cpp.o CMakeFiles/_cmd.dir/layer4/Cmd.cpp.o CMakeFiles/_cmd.dir/layer4/Menu.cpp.o CMakeFiles/_cmd.dir/layer4/PopUp.cpp.o CMakeFiles/_cmd.dir/layer5/PyMOL.cpp.o CMakeFiles/_cmd.dir/layer5/TestPyMOL.cpp.o CMakeFiles/_cmd.dir/layer5/main.cpp.o CMakeFiles/_cmd.dir/ov/src/OVContext.cpp.o CMakeFiles/_cmd.dir/ov/src/OVHeap.cpp.o CMakeFiles/_cmd.dir/ov/src/OVHeapArray.cpp.o CMakeFiles/_cmd.dir/ov/src/OVLexicon.cpp.o CMakeFiles/_cmd.dir/ov/src/OVOneToAny.cpp.o CMakeFiles/_cmd.dir/ov/src/OVOneToOne.cpp.o CMakeFiles/_cmd.dir/ov/src/OVRandom.cpp.o CMakeFiles/_cmd.dir/ov/src/ov_utility.cpp.o -lpng -lfreetype -lxml2 -lGL -lGLEW -lnetcdf -fopenmp gmake[3]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd' [100%] Built target _cmd gmake[2]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd/CMakeFiles 0 gmake[1]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd' cmake /build/reproducible-path/pymol-3.1.0+dfsg -DTARGET_NAME=_champ -DCMAKE_LIBRARY_OUTPUT_DIRECTORY=/build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/champ -DCMAKE_BUILD_TYPE=Release -DALL_INC_DIR=contrib/champ;/usr/include/python3.14;/usr/include/python3.14; -DALL_SRC=contrib/champ/champ.c;contrib/champ/champ_module.c;contrib/champ/chiral.c;contrib/champ/err2.c;contrib/champ/feedback2.c;contrib/champ/list.c;contrib/champ/os_memory.c;contrib/champ/sort.c;contrib/champ/strblock.c;contrib/champ/vla.c; -DALL_DEF= -DALL_LIB_DIR=/usr/lib; -DALL_LIB= -DALL_COMP_ARGS= -DALL_EXT_LINK= -DSHARED_SUFFIX=.cpython-314-aarch64-linux-gnu.so -- Configuring done (0.0s) -- Generating done (0.0s) -- Build files have been written to: /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_champ cmake --build . --config Release -j12 gmake[1]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_champ' /usr/bin/cmake -S/build/reproducible-path/pymol-3.1.0+dfsg -B/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_champ --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_champ/CMakeFiles /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_champ//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[2]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_champ' /usr/bin/gmake -f CMakeFiles/_champ.dir/build.make CMakeFiles/_champ.dir/depend gmake[3]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_champ' cd /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_champ && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/pymol-3.1.0+dfsg /build/reproducible-path/pymol-3.1.0+dfsg /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_champ /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_champ /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_champ/CMakeFiles/_champ.dir/DependInfo.cmake "--color=" _champ gmake[3]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_champ' /usr/bin/gmake -f CMakeFiles/_champ.dir/build.make CMakeFiles/_champ.dir/build gmake[3]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_champ' gmake[3]: Nothing to be done for 'CMakeFiles/_champ.dir/build'. gmake[3]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_champ' [100%] Built target _champ gmake[2]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_champ' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_champ/CMakeFiles 0 gmake[1]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_champ' running install_lib creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard/sculpting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard/filter.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard/dragging.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard/nucmutagenesis.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard/charge.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard/distance.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard/command.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard/toggle.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard/message.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard/label.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard/cleanup.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard/density.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard/pair_fit.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard/benchmark.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard/box.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard/annotation.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard/renaming.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard/measurement.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard/mutagenesis.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard/pseudoatom.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard/appearance.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard/openvr.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard/stereodemo.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard/demo.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard/security.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/morphing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/computing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/seqalign.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/keyboard.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/shortcut.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/util.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/xwin.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizarding.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/diagnosing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/helping.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/povray.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/controlling.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/fitting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/_cmd.cpython-314-aarch64-linux-gnu.so -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/preset.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/checking.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/querying.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/callback.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/parsing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/moving.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/editor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/shortcut_dict.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/internal.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/selector.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/viewing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/save_shortcut.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/completing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/selecting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/keywords.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/cgo.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/headering.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/movie.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/colorramping.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/cmd.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/plugins copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/plugins/repository.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/plugins copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/plugins/installation.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/plugins copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/plugins/legacysupport.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/plugins copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/plugins/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/plugins copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/plugins/managergui_qt.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/plugins copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/plugins/managergui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/plugins copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/invocation.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/colorprinting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/api.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/menu.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/editing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/rpc.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/cgobuilder.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/experimenting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/parser.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/mpeg_encode.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/Qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/Qt/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/Qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/Qt/utils.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/Qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/__main__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/creating.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/setting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/shortcut_manager.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/_gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/locking.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/exporting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/constants.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/xray.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/externing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/lazyio.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/monitoring.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/pymolhttpd.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/feedingback.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/constants_palette.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/importing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/commanding.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/stereochemistry copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/stereochemistry/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/stereochemistry copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/vfont.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol2 copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol2/cmd2.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol2 copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol2/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol2 creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms/render.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms/save_object.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms/create_shortcut.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms/change_confirm.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms/load_aln.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms/load_traj.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms/png.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms/load_map.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms/shortcut_menu.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms/colors.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms/pluginitem.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms/props.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms/askpartial.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms/fetch.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms/load_mae.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms/load_mtz.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms/save_molecule.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms/pluginmanager.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms/movieexport.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms/help_shortcut.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/file_dialogs.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/shortcut_menu_gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/advanced_settings_gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/scene_bin_gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/pymol_gl_widget.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/volume.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/properties_dialog.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/builder.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/mimic_pmg_tk.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/mimic_tk.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/syntax copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/syntax/pmlparser.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/syntax copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/syntax/python.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/syntax copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/syntax/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/syntax copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/syntax/pml.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/syntax copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/keymapping.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/TextEditor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/pymol_qt_gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/web creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/web/examples copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/web/examples/justhttpd.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/web/examples copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/web/examples/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/web/examples creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk/skins creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk/skins/normal copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk/skins/normal/ModalWindow.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk/skins/normal copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk/skins/normal/builder.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk/skins/normal copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk/skins/normal/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk/skins/normal copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk/skins/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk/skins creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk/skins/demo copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk/skins/demo/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk/skins/demo copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk/SetEditor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk/PMGApp.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk/volume.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk/PyMOLMapLoad.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk/startup copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk/startup/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk/startup copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk/ColorEditor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk/TextEditor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk/Setting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk/Demo.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/place.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/bond_mmff.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/protein_residues.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/charge.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/mae.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/protein_amber99.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/water_residues.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/xyz.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/fast copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/fast/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/fast copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/arc.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/pkl.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/gms.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/io.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/dictdb.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/lst.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/cif.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/mass.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/protein_amber.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/sdf.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/models.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/map.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/cc1.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/gamess1.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/bonds.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/water_amber.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/pdb.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/bmin copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/bmin/util.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/bmin copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/bmin/state.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/bmin copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/bmin/realtime.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/bmin copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/bmin/commands.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/bmin copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/bmin/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/bmin copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/cpv.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/mol2.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/mol.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/brick.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/hetatm.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/bond_amber.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/tinker copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/tinker/amber.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/tinker copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/tinker/state.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/tinker copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/tinker/realtime.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/tinker copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/tinker/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/tinker copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/tinker/keyword.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/tinker copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/solvate.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/neighbor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/mmd.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/mmtf copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/mmtf/io.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/mmtf copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/mmtf/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/mmtf creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/champ copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/champ/assign.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/champ copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/champ/amber99.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/champ copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/champ/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/champ copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/champ/formal_charges.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/champ copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/champ/_champ.cpython-314-aarch64-linux-gnu.so -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/champ copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/protein.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/fragments copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/fragments/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/fragments copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/protein_mmff.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard/sculpting.py to sculpting.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard/filter.py to filter.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard/dragging.py to dragging.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard/nucmutagenesis.py to nucmutagenesis.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard/charge.py to charge.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard/distance.py to distance.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard/command.py to command.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard/toggle.py to toggle.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard/message.py to message.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard/label.py to label.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard/cleanup.py to cleanup.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard/density.py to density.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard/pair_fit.py to pair_fit.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard/benchmark.py to benchmark.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard/box.py to box.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard/annotation.py to annotation.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard/__init__.py to __init__.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard/renaming.py to renaming.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard/measurement.py to measurement.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard/mutagenesis.py to mutagenesis.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard/pseudoatom.py to pseudoatom.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard/appearance.py to appearance.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard/openvr.py to openvr.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard/stereodemo.py to stereodemo.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard/demo.py to demo.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard/security.py to security.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/morphing.py to morphing.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/computing.py to computing.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/seqalign.py to seqalign.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/keyboard.py to keyboard.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/shortcut.py to shortcut.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/util.py to util.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/xwin.py to xwin.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizarding.py to wizarding.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/diagnosing.py to diagnosing.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/helping.py to helping.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/povray.py to povray.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/controlling.py to controlling.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/fitting.py to fitting.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/preset.py to preset.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/checking.py to checking.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/querying.py to querying.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/callback.py to callback.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/parsing.py to parsing.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/moving.py to moving.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/editor.py to editor.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/shortcut_dict.py to shortcut_dict.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/internal.py to internal.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/selector.py to selector.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/viewing.py to viewing.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/save_shortcut.py to save_shortcut.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/completing.py to completing.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/selecting.py to selecting.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/keywords.py to keywords.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/cgo.py to cgo.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/headering.py to headering.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/movie.py to movie.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/colorramping.py to colorramping.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/__init__.py to __init__.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/gui.py to gui.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/cmd.py to cmd.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/plugins/repository.py to repository.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/plugins/installation.py to installation.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/plugins/legacysupport.py to legacysupport.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/plugins/__init__.py to __init__.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/plugins/managergui_qt.py to managergui_qt.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/plugins/managergui.py to managergui.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/invocation.py to invocation.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/colorprinting.py to colorprinting.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/api.py to api.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/menu.py to menu.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/editing.py to editing.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/rpc.py to rpc.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/cgobuilder.py to cgobuilder.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/experimenting.py to experimenting.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/parser.py to parser.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/mpeg_encode.py to mpeg_encode.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/Qt/__init__.py to __init__.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/Qt/utils.py to utils.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/__main__.py to __main__.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/creating.py to creating.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/setting.py to setting.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/shortcut_manager.py to shortcut_manager.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/_gui.py to _gui.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/locking.py to locking.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/exporting.py to exporting.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/constants.py to constants.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/xray.py to xray.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/externing.py to externing.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/lazyio.py to lazyio.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/monitoring.py to monitoring.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/pymolhttpd.py to pymolhttpd.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/feedingback.py to feedingback.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/constants_palette.py to constants_palette.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/importing.py to importing.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/commanding.py to commanding.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/stereochemistry/__init__.py to __init__.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/vfont.py to vfont.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol2/cmd2.py to cmd2.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol2/__init__.py to __init__.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/forms/__init__.py to __init__.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/file_dialogs.py to file_dialogs.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/shortcut_menu_gui.py to shortcut_menu_gui.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/advanced_settings_gui.py to advanced_settings_gui.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/scene_bin_gui.py to scene_bin_gui.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/pymol_gl_widget.py to pymol_gl_widget.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/volume.py to volume.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/properties_dialog.py to properties_dialog.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/builder.py to builder.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/__init__.py to __init__.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/mimic_pmg_tk.py to mimic_pmg_tk.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/mimic_tk.py to mimic_tk.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/syntax/pmlparser.py to pmlparser.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/syntax/python.py to python.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/syntax/__init__.py to __init__.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/syntax/pml.py to pml.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/keymapping.py to keymapping.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/TextEditor.py to TextEditor.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/pymol_qt_gui.py to pymol_qt_gui.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/web/examples/justhttpd.py to justhttpd.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/web/examples/__init__.py to __init__.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk/skins/normal/ModalWindow.py to ModalWindow.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk/skins/normal/builder.py to builder.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk/skins/normal/__init__.py to __init__.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk/skins/__init__.py to __init__.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk/skins/demo/__init__.py to __init__.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk/SetEditor.py to SetEditor.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk/PMGApp.py to PMGApp.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk/volume.py to volume.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk/PyMOLMapLoad.py to PyMOLMapLoad.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk/__init__.py to __init__.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk/startup/__init__.py to __init__.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk/ColorEditor.py to ColorEditor.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk/TextEditor.py to TextEditor.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk/Setting.py to Setting.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk/Demo.py to Demo.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/place.py to place.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/bond_mmff.py to bond_mmff.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/protein_residues.py to protein_residues.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/charge.py to charge.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/mae.py to mae.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/protein_amber99.py to protein_amber99.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/water_residues.py to water_residues.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/xyz.py to xyz.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/fast/__init__.py to __init__.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/arc.py to arc.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/pkl.py to pkl.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/gms.py to gms.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/io.py to io.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/dictdb.py to dictdb.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/lst.py to lst.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/cif.py to cif.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/mass.py to mass.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/protein_amber.py to protein_amber.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/sdf.py to sdf.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/models.py to models.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/map.py to map.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/cc1.py to cc1.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/gamess1.py to gamess1.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/bonds.py to bonds.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/__init__.py to __init__.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/water_amber.py to water_amber.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/pdb.py to pdb.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/bmin/util.py to util.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/bmin/state.py to state.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/bmin/realtime.py to realtime.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/bmin/commands.py to commands.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/bmin/__init__.py to __init__.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/cpv.py to cpv.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/mol2.py to mol2.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/mol.py to mol.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/brick.py to brick.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/hetatm.py to hetatm.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/bond_amber.py to bond_amber.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/tinker/amber.py to amber.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/tinker/state.py to state.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/tinker/realtime.py to realtime.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/tinker/__init__.py to __init__.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/tinker/keyword.py to keyword.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/solvate.py to solvate.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/neighbor.py to neighbor.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/mmd.py to mmd.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/mmtf/io.py to io.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/mmtf/__init__.py to __init__.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/champ/assign.py to assign.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/champ/amber99.py to amber99.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/champ/__init__.py to __init__.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/champ/formal_charges.py to formal_charges.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/protein.py to protein.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/fragments/__init__.py to __init__.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/protein_mmff.py to protein_mmff.cpython-314.pyc running install_egg_info Copying modules/pymol.egg-info to /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol-3.1.0.egg-info Skipping SOURCES.txt running install_scripts Installing pymol script to /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/bin I: pybuild base:385: /usr/bin/python3 setup.py install --root /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol /usr/lib/python3/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated !! ******************************************************************************** Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). This deprecation is overdue, please update your project and remove deprecated calls to avoid build errors in the future. See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! corresp(dist, value, root_dir) running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running build running build_py running egg_info writing modules/pymol.egg-info/PKG-INFO /usr/lib/python3/dist-packages/setuptools/_core_metadata.py:163: SetuptoolsDeprecationWarning: Invalid config. !! ******************************************************************************** newlines are not allowed in `summary` and will break in the future ******************************************************************************** !! write_field('Summary', single_line(summary)) writing dependency_links to modules/pymol.egg-info/dependency_links.txt writing entry points to modules/pymol.egg-info/entry_points.txt writing requirements to modules/pymol.egg-info/requires.txt writing top-level names to modules/pymol.egg-info/top_level.txt reading manifest file 'modules/pymol.egg-info/SOURCES.txt' adding license file 'LICENSE' adding license file 'AUTHORS' writing manifest file 'modules/pymol.egg-info/SOURCES.txt' running build_ext cmake /build/reproducible-path/pymol-3.1.0+dfsg -DTARGET_NAME=_cmd -DCMAKE_LIBRARY_OUTPUT_DIRECTORY=/build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol -DCMAKE_BUILD_TYPE=Release -DALL_INC_DIR=include;contrib/uiuc/plugins/include;ov/src;layer0;layer1;layer2;layer3;layer4;layer5;build/generated;contrib/uiuc/plugins/molfile_plugin/src;/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include;/usr/include;/usr/include/freetype2;/usr/include/libxml2;/usr/include/python3.13;/usr/include/python3.13; -DALL_SRC=build/generated/ShaderText.cpp;contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c;contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c;contrib/uiuc/plugins/molfile_plugin/src/avsplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.c;contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c;contrib/uiuc/plugins/molfile_plugin/src/biomoccaplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/carplugin.c;contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/corplugin.c;contrib/uiuc/plugins/molfile_plugin/src/crdplugin.c;contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c;contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c;contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/dxplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c;contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/grdplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/hash.c;contrib/uiuc/plugins/molfile_plugin/src/inthash.c;contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c;contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/mapplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c;contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c;contrib/uiuc/plugins/molfile_plugin/src/netcdfplugin.c;contrib/uiuc/plugins/molfile_plugin/src/offplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c;contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c;contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c;contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c;contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c;contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c;layer0/Bezier.cpp;layer0/Block.cpp;layer0/CarveHelper.cpp;layer0/ContourSurf.cpp;layer0/Crystal.cpp;layer0/Err.cpp;layer0/Feedback.cpp;layer0/Field.cpp;layer0/File.cpp;layer0/GFXManager.cpp;layer0/GenericBuffer.cpp;layer0/GraphicsUtil.cpp;layer0/Isosurf.cpp;layer0/Map.cpp;layer0/Match.cpp;layer0/Matrix.cpp;layer0/MemoryDebug.cpp;layer0/MemoryUsage.cpp;layer0/MyPNG.cpp;layer0/Parse.cpp;layer0/Pixmap.cpp;layer0/PostProcess.cpp;layer0/PrintUtils.cpp;layer0/ShaderMgr.cpp;layer0/ShaderPreprocessor.cpp;layer0/ShaderPrg.cpp;layer0/Sphere.cpp;layer0/TTT.cpp;layer0/Tetsurf.cpp;layer0/Texture.cpp;layer0/Tracker.cpp;layer0/Triangle.cpp;layer0/Util.cpp;layer0/Util2.cpp;layer0/Vector.cpp;layer0/Word.cpp;layer0/ccealignmodule.cpp;layer0/marching_cubes.cpp;layer0/os_gl.cpp;layer1/Basis.cpp;layer1/ButMode.cpp;layer1/CGO.cpp;layer1/CGOGL.cpp;layer1/CGORenderer.cpp;layer1/COLLADA.cpp;layer1/Camera.cpp;layer1/Character.cpp;layer1/Color.cpp;layer1/Control.cpp;layer1/Extrude.cpp;layer1/Font.cpp;layer1/FontGLUT.cpp;layer1/FontGLUT8x13.cpp;layer1/FontGLUT9x15.cpp;layer1/FontGLUTHel10.cpp;layer1/FontGLUTHel12.cpp;layer1/FontGLUTHel18.cpp;layer1/FontType.cpp;layer1/ImageUtils.cpp;layer1/Movie.cpp;layer1/Ortho.cpp;layer1/P.cpp;layer1/PConv.cpp;layer1/Picking.cpp;layer1/Pop.cpp;layer1/PyMOLObject.cpp;layer1/Ray.cpp;layer1/Rep.cpp;layer1/Scene.cpp;layer1/SceneMouse.cpp;layer1/ScenePicking.cpp;layer1/SceneRay.cpp;layer1/SceneRender.cpp;layer1/SceneView.cpp;layer1/ScrollBar.cpp;layer1/Seq.cpp;layer1/Setting.cpp;layer1/Shaker.cpp;layer1/SymOp.cpp;layer1/SymOpPConv.cpp;layer1/SymOpTools.cpp;layer1/Symmetry.cpp;layer1/Text.cpp;layer1/TypeFace.cpp;layer1/View.cpp;layer1/Wizard.cpp;layer2/AssemblyHelpers.cpp;layer2/AtomInfo.cpp;layer2/AtomInfoHistory.cpp;layer2/BondTypeHistory.cpp;layer2/CifFile.cpp;layer2/CifMoleculeReader.cpp;layer2/CoordSet.cpp;layer2/DistSet.cpp;layer2/GadgetSet.cpp;layer2/HydrogenAdder.cpp;layer2/MmodTyping.cpp;layer2/MmtfMoleculeReader.cpp;layer2/Mol2Typing.cpp;layer2/MolV3000.cpp;layer2/ObjectAlignment.cpp;layer2/ObjectCGO.cpp;layer2/ObjectCallback.cpp;layer2/ObjectCurve.cpp;layer2/ObjectDist.cpp;layer2/ObjectGadget.cpp;layer2/ObjectGadgetRamp.cpp;layer2/ObjectGroup.cpp;layer2/ObjectMap.cpp;layer2/ObjectMesh.cpp;layer2/ObjectMolecule.cpp;layer2/ObjectMolecule2.cpp;layer2/ObjectMolecule3.cpp;layer2/ObjectSlice.cpp;layer2/ObjectSurface.cpp;layer2/ObjectVolume.cpp;layer2/RepAngle.cpp;layer2/RepCartoon.cpp;layer2/RepCylBond.cpp;layer2/RepDihedral.cpp;layer2/RepDistDash.cpp;layer2/RepDistLabel.cpp;layer2/RepDot.cpp;layer2/RepEllipsoid.cpp;layer2/RepLabel.cpp;layer2/RepMesh.cpp;layer2/RepNonbonded.cpp;layer2/RepNonbondedSphere.cpp;layer2/RepRibbon.cpp;layer2/RepSphere.cpp;layer2/RepSphereGenerate.cpp;layer2/RepSphereImmediate.cpp;layer2/RepSurface.cpp;layer2/RepWireBond.cpp;layer2/Sculpt.cpp;layer2/SculptCache.cpp;layer2/SideChainHelper.cpp;layer2/VFont.cpp;layer3/AtomIterators.cpp;layer3/CifDataValueFormatter.cpp;layer3/Editor.cpp;layer3/Executive.cpp;layer3/ExecutivePython.cpp;layer3/Interactions.cpp;layer3/MaeExportHelpers.cpp;layer3/MoleculeExporter.cpp;layer3/MovieScene.cpp;layer3/PlugIOManager.cpp;layer3/RingFinder.cpp;layer3/Seeker.cpp;layer3/Selector.cpp;layer3/SelectorTmp.cpp;layer3/SpecRec.cpp;layer3/SpecRecSpecial.cpp;layer4/Cmd.cpp;layer4/Menu.cpp;layer4/PopUp.cpp;layer5/PyMOL.cpp;layer5/TestPyMOL.cpp;layer5/main.cpp;ov/src/OVContext.cpp;ov/src/OVHeap.cpp;ov/src/OVHeapArray.cpp;ov/src/OVLexicon.cpp;ov/src/OVOneToAny.cpp;ov/src/OVOneToOne.cpp;ov/src/OVRandom.cpp;ov/src/ov_utility.cpp; -DALL_DEF=_PYMOL_LIBPNG;_PYMOL_FREETYPE;PYMOL_OPENMP;_PYMOL_VMD_PLUGINS;_HAVE_LIBXML;_PYMOL_NO_MSGPACKC;_PYMOL_NO_MAIN;_PYMOL_NUMPY; -DALL_LIB_DIR=/usr/lib; -DALL_LIB=png;freetype;xml2;GL;GLEW;netcdf; -DALL_COMP_ARGS=-Werror=return-type;-Wunused-variable;-Wno-switch;-Wno-narrowing;-Wno-char-subscripts;-O3;-fopenmp; -DALL_EXT_LINK=-fopenmp -DSHARED_SUFFIX=.cpython-313-aarch64-linux-gnu.so -- Configuring done (0.0s) -- Generating done (0.0s) -- Build files have been written to: /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd cmake --build . --config Release -j12 gmake[1]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd' /usr/bin/cmake -S/build/reproducible-path/pymol-3.1.0+dfsg -B/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd/CMakeFiles /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[2]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd' /usr/bin/gmake -f CMakeFiles/_cmd.dir/build.make CMakeFiles/_cmd.dir/depend gmake[3]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd' cd /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/pymol-3.1.0+dfsg /build/reproducible-path/pymol-3.1.0+dfsg /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd/CMakeFiles/_cmd.dir/DependInfo.cmake "--color=" _cmd gmake[3]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd' /usr/bin/gmake -f CMakeFiles/_cmd.dir/build.make CMakeFiles/_cmd.dir/build gmake[3]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd' [ 1%] Building CXX object CMakeFiles/_cmd.dir/layer4/Cmd.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer4/Cmd.cpp.o -MF CMakeFiles/_cmd.dir/layer4/Cmd.cpp.o.d -o CMakeFiles/_cmd.dir/layer4/Cmd.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer4/Cmd.cpp [ 2%] Linking CXX shared library /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/_cmd.cpython-313-aarch64-linux-gnu.so /usr/bin/cmake -E cmake_link_script CMakeFiles/_cmd.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/_cmd.dir/link.d -Wl,-soname,_cmd.cpython-313-aarch64-linux-gnu.so -o /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/_cmd.cpython-313-aarch64-linux-gnu.so CMakeFiles/_cmd.dir/build/generated/ShaderText.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/avsplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/biomoccaplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/carplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/corplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/crdplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dxplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/grdplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/hash.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/inthash.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/mapplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/netcdfplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/offplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp.o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c.o CMakeFiles/_cmd.dir/layer0/Bezier.cpp.o CMakeFiles/_cmd.dir/layer0/Block.cpp.o CMakeFiles/_cmd.dir/layer0/CarveHelper.cpp.o CMakeFiles/_cmd.dir/layer0/ContourSurf.cpp.o CMakeFiles/_cmd.dir/layer0/Crystal.cpp.o CMakeFiles/_cmd.dir/layer0/Err.cpp.o CMakeFiles/_cmd.dir/layer0/Feedback.cpp.o CMakeFiles/_cmd.dir/layer0/Field.cpp.o CMakeFiles/_cmd.dir/layer0/File.cpp.o CMakeFiles/_cmd.dir/layer0/GFXManager.cpp.o CMakeFiles/_cmd.dir/layer0/GenericBuffer.cpp.o CMakeFiles/_cmd.dir/layer0/GraphicsUtil.cpp.o CMakeFiles/_cmd.dir/layer0/Isosurf.cpp.o CMakeFiles/_cmd.dir/layer0/Map.cpp.o CMakeFiles/_cmd.dir/layer0/Match.cpp.o CMakeFiles/_cmd.dir/layer0/Matrix.cpp.o CMakeFiles/_cmd.dir/layer0/MemoryDebug.cpp.o CMakeFiles/_cmd.dir/layer0/MemoryUsage.cpp.o CMakeFiles/_cmd.dir/layer0/MyPNG.cpp.o CMakeFiles/_cmd.dir/layer0/Parse.cpp.o CMakeFiles/_cmd.dir/layer0/Pixmap.cpp.o CMakeFiles/_cmd.dir/layer0/PostProcess.cpp.o CMakeFiles/_cmd.dir/layer0/PrintUtils.cpp.o CMakeFiles/_cmd.dir/layer0/ShaderMgr.cpp.o CMakeFiles/_cmd.dir/layer0/ShaderPreprocessor.cpp.o CMakeFiles/_cmd.dir/layer0/ShaderPrg.cpp.o CMakeFiles/_cmd.dir/layer0/Sphere.cpp.o CMakeFiles/_cmd.dir/layer0/TTT.cpp.o CMakeFiles/_cmd.dir/layer0/Tetsurf.cpp.o CMakeFiles/_cmd.dir/layer0/Texture.cpp.o CMakeFiles/_cmd.dir/layer0/Tracker.cpp.o CMakeFiles/_cmd.dir/layer0/Triangle.cpp.o CMakeFiles/_cmd.dir/layer0/Util.cpp.o CMakeFiles/_cmd.dir/layer0/Util2.cpp.o CMakeFiles/_cmd.dir/layer0/Vector.cpp.o CMakeFiles/_cmd.dir/layer0/Word.cpp.o CMakeFiles/_cmd.dir/layer0/ccealignmodule.cpp.o CMakeFiles/_cmd.dir/layer0/marching_cubes.cpp.o CMakeFiles/_cmd.dir/layer0/os_gl.cpp.o CMakeFiles/_cmd.dir/layer1/Basis.cpp.o CMakeFiles/_cmd.dir/layer1/ButMode.cpp.o CMakeFiles/_cmd.dir/layer1/CGO.cpp.o CMakeFiles/_cmd.dir/layer1/CGOGL.cpp.o CMakeFiles/_cmd.dir/layer1/CGORenderer.cpp.o CMakeFiles/_cmd.dir/layer1/COLLADA.cpp.o CMakeFiles/_cmd.dir/layer1/Camera.cpp.o CMakeFiles/_cmd.dir/layer1/Character.cpp.o CMakeFiles/_cmd.dir/layer1/Color.cpp.o CMakeFiles/_cmd.dir/layer1/Control.cpp.o CMakeFiles/_cmd.dir/layer1/Extrude.cpp.o CMakeFiles/_cmd.dir/layer1/Font.cpp.o CMakeFiles/_cmd.dir/layer1/FontGLUT.cpp.o CMakeFiles/_cmd.dir/layer1/FontGLUT8x13.cpp.o CMakeFiles/_cmd.dir/layer1/FontGLUT9x15.cpp.o CMakeFiles/_cmd.dir/layer1/FontGLUTHel10.cpp.o CMakeFiles/_cmd.dir/layer1/FontGLUTHel12.cpp.o CMakeFiles/_cmd.dir/layer1/FontGLUTHel18.cpp.o CMakeFiles/_cmd.dir/layer1/FontType.cpp.o CMakeFiles/_cmd.dir/layer1/ImageUtils.cpp.o CMakeFiles/_cmd.dir/layer1/Movie.cpp.o CMakeFiles/_cmd.dir/layer1/Ortho.cpp.o CMakeFiles/_cmd.dir/layer1/P.cpp.o CMakeFiles/_cmd.dir/layer1/PConv.cpp.o CMakeFiles/_cmd.dir/layer1/Picking.cpp.o CMakeFiles/_cmd.dir/layer1/Pop.cpp.o CMakeFiles/_cmd.dir/layer1/PyMOLObject.cpp.o CMakeFiles/_cmd.dir/layer1/Ray.cpp.o CMakeFiles/_cmd.dir/layer1/Rep.cpp.o CMakeFiles/_cmd.dir/layer1/Scene.cpp.o CMakeFiles/_cmd.dir/layer1/SceneMouse.cpp.o CMakeFiles/_cmd.dir/layer1/ScenePicking.cpp.o CMakeFiles/_cmd.dir/layer1/SceneRay.cpp.o CMakeFiles/_cmd.dir/layer1/SceneRender.cpp.o CMakeFiles/_cmd.dir/layer1/SceneView.cpp.o CMakeFiles/_cmd.dir/layer1/ScrollBar.cpp.o CMakeFiles/_cmd.dir/layer1/Seq.cpp.o CMakeFiles/_cmd.dir/layer1/Setting.cpp.o CMakeFiles/_cmd.dir/layer1/Shaker.cpp.o CMakeFiles/_cmd.dir/layer1/SymOp.cpp.o CMakeFiles/_cmd.dir/layer1/SymOpPConv.cpp.o CMakeFiles/_cmd.dir/layer1/SymOpTools.cpp.o CMakeFiles/_cmd.dir/layer1/Symmetry.cpp.o CMakeFiles/_cmd.dir/layer1/Text.cpp.o CMakeFiles/_cmd.dir/layer1/TypeFace.cpp.o CMakeFiles/_cmd.dir/layer1/View.cpp.o CMakeFiles/_cmd.dir/layer1/Wizard.cpp.o CMakeFiles/_cmd.dir/layer2/AssemblyHelpers.cpp.o CMakeFiles/_cmd.dir/layer2/AtomInfo.cpp.o CMakeFiles/_cmd.dir/layer2/AtomInfoHistory.cpp.o CMakeFiles/_cmd.dir/layer2/BondTypeHistory.cpp.o CMakeFiles/_cmd.dir/layer2/CifFile.cpp.o CMakeFiles/_cmd.dir/layer2/CifMoleculeReader.cpp.o CMakeFiles/_cmd.dir/layer2/CoordSet.cpp.o CMakeFiles/_cmd.dir/layer2/DistSet.cpp.o CMakeFiles/_cmd.dir/layer2/GadgetSet.cpp.o CMakeFiles/_cmd.dir/layer2/HydrogenAdder.cpp.o CMakeFiles/_cmd.dir/layer2/MmodTyping.cpp.o CMakeFiles/_cmd.dir/layer2/MmtfMoleculeReader.cpp.o CMakeFiles/_cmd.dir/layer2/Mol2Typing.cpp.o CMakeFiles/_cmd.dir/layer2/MolV3000.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectAlignment.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectCGO.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectCallback.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectCurve.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectDist.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectGadget.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectGadgetRamp.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectGroup.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectMap.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectMesh.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectMolecule.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectMolecule2.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectMolecule3.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectSlice.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectSurface.cpp.o CMakeFiles/_cmd.dir/layer2/ObjectVolume.cpp.o CMakeFiles/_cmd.dir/layer2/RepAngle.cpp.o CMakeFiles/_cmd.dir/layer2/RepCartoon.cpp.o CMakeFiles/_cmd.dir/layer2/RepCylBond.cpp.o CMakeFiles/_cmd.dir/layer2/RepDihedral.cpp.o CMakeFiles/_cmd.dir/layer2/RepDistDash.cpp.o CMakeFiles/_cmd.dir/layer2/RepDistLabel.cpp.o CMakeFiles/_cmd.dir/layer2/RepDot.cpp.o CMakeFiles/_cmd.dir/layer2/RepEllipsoid.cpp.o CMakeFiles/_cmd.dir/layer2/RepLabel.cpp.o CMakeFiles/_cmd.dir/layer2/RepMesh.cpp.o CMakeFiles/_cmd.dir/layer2/RepNonbonded.cpp.o CMakeFiles/_cmd.dir/layer2/RepNonbondedSphere.cpp.o CMakeFiles/_cmd.dir/layer2/RepRibbon.cpp.o CMakeFiles/_cmd.dir/layer2/RepSphere.cpp.o CMakeFiles/_cmd.dir/layer2/RepSphereGenerate.cpp.o CMakeFiles/_cmd.dir/layer2/RepSphereImmediate.cpp.o CMakeFiles/_cmd.dir/layer2/RepSurface.cpp.o CMakeFiles/_cmd.dir/layer2/RepWireBond.cpp.o CMakeFiles/_cmd.dir/layer2/Sculpt.cpp.o CMakeFiles/_cmd.dir/layer2/SculptCache.cpp.o CMakeFiles/_cmd.dir/layer2/SideChainHelper.cpp.o CMakeFiles/_cmd.dir/layer2/VFont.cpp.o CMakeFiles/_cmd.dir/layer3/AtomIterators.cpp.o CMakeFiles/_cmd.dir/layer3/CifDataValueFormatter.cpp.o CMakeFiles/_cmd.dir/layer3/Editor.cpp.o CMakeFiles/_cmd.dir/layer3/Executive.cpp.o CMakeFiles/_cmd.dir/layer3/ExecutivePython.cpp.o CMakeFiles/_cmd.dir/layer3/Interactions.cpp.o CMakeFiles/_cmd.dir/layer3/MaeExportHelpers.cpp.o CMakeFiles/_cmd.dir/layer3/MoleculeExporter.cpp.o CMakeFiles/_cmd.dir/layer3/MovieScene.cpp.o CMakeFiles/_cmd.dir/layer3/PlugIOManager.cpp.o CMakeFiles/_cmd.dir/layer3/RingFinder.cpp.o CMakeFiles/_cmd.dir/layer3/Seeker.cpp.o CMakeFiles/_cmd.dir/layer3/Selector.cpp.o CMakeFiles/_cmd.dir/layer3/SelectorTmp.cpp.o CMakeFiles/_cmd.dir/layer3/SpecRec.cpp.o CMakeFiles/_cmd.dir/layer3/SpecRecSpecial.cpp.o CMakeFiles/_cmd.dir/layer4/Cmd.cpp.o CMakeFiles/_cmd.dir/layer4/Menu.cpp.o CMakeFiles/_cmd.dir/layer4/PopUp.cpp.o CMakeFiles/_cmd.dir/layer5/PyMOL.cpp.o CMakeFiles/_cmd.dir/layer5/TestPyMOL.cpp.o CMakeFiles/_cmd.dir/layer5/main.cpp.o CMakeFiles/_cmd.dir/ov/src/OVContext.cpp.o CMakeFiles/_cmd.dir/ov/src/OVHeap.cpp.o CMakeFiles/_cmd.dir/ov/src/OVHeapArray.cpp.o CMakeFiles/_cmd.dir/ov/src/OVLexicon.cpp.o CMakeFiles/_cmd.dir/ov/src/OVOneToAny.cpp.o CMakeFiles/_cmd.dir/ov/src/OVOneToOne.cpp.o CMakeFiles/_cmd.dir/ov/src/OVRandom.cpp.o CMakeFiles/_cmd.dir/ov/src/ov_utility.cpp.o -lpng -lfreetype -lxml2 -lGL -lGLEW -lnetcdf -fopenmp gmake[3]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd' [100%] Built target _cmd gmake[2]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd/CMakeFiles 0 gmake[1]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd' cmake /build/reproducible-path/pymol-3.1.0+dfsg -DTARGET_NAME=_champ -DCMAKE_LIBRARY_OUTPUT_DIRECTORY=/build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/champ -DCMAKE_BUILD_TYPE=Release -DALL_INC_DIR=contrib/champ;/usr/include/python3.13;/usr/include/python3.13; -DALL_SRC=contrib/champ/champ.c;contrib/champ/champ_module.c;contrib/champ/chiral.c;contrib/champ/err2.c;contrib/champ/feedback2.c;contrib/champ/list.c;contrib/champ/os_memory.c;contrib/champ/sort.c;contrib/champ/strblock.c;contrib/champ/vla.c; -DALL_DEF= -DALL_LIB_DIR=/usr/lib; -DALL_LIB= -DALL_COMP_ARGS= -DALL_EXT_LINK= -DSHARED_SUFFIX=.cpython-313-aarch64-linux-gnu.so -- Configuring done (0.0s) -- Generating done (0.0s) -- Build files have been written to: /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_champ cmake --build . --config Release -j12 gmake[1]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_champ' /usr/bin/cmake -S/build/reproducible-path/pymol-3.1.0+dfsg -B/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_champ --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_champ/CMakeFiles /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_champ//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[2]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_champ' /usr/bin/gmake -f CMakeFiles/_champ.dir/build.make CMakeFiles/_champ.dir/depend gmake[3]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_champ' cd /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_champ && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/pymol-3.1.0+dfsg /build/reproducible-path/pymol-3.1.0+dfsg /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_champ /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_champ /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_champ/CMakeFiles/_champ.dir/DependInfo.cmake "--color=" _champ gmake[3]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_champ' /usr/bin/gmake -f CMakeFiles/_champ.dir/build.make CMakeFiles/_champ.dir/build gmake[3]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_champ' gmake[3]: Nothing to be done for 'CMakeFiles/_champ.dir/build'. gmake[3]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_champ' [100%] Built target _champ gmake[2]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_champ' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_champ/CMakeFiles 0 gmake[1]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_champ' running install_lib creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/sculpting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/filter.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/dragging.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/nucmutagenesis.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/charge.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/distance.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/command.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/toggle.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/message.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/label.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/cleanup.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/density.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/pair_fit.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/benchmark.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/box.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/annotation.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/renaming.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/measurement.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/mutagenesis.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/pseudoatom.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/appearance.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/openvr.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/stereodemo.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/demo.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/security.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/morphing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/computing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/seqalign.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/keyboard.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/shortcut.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/util.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/xwin.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizarding.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/diagnosing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/helping.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/povray.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/controlling.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/fitting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/preset.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/checking.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/querying.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/callback.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/parsing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/moving.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/editor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/shortcut_dict.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/internal.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/selector.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/viewing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/save_shortcut.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/completing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/selecting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/keywords.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/cgo.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/headering.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/movie.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/colorramping.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/cmd.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/plugins copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/plugins/repository.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/plugins copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/plugins/installation.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/plugins copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/plugins/legacysupport.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/plugins copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/plugins/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/plugins copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/plugins/managergui_qt.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/plugins copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/plugins/managergui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/plugins copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/invocation.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/colorprinting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/api.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/_cmd.cpython-313-aarch64-linux-gnu.so -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/menu.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/editing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/rpc.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/cgobuilder.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/experimenting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/parser.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/mpeg_encode.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/Qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/Qt/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/Qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/Qt/utils.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/Qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/__main__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/creating.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/setting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/shortcut_manager.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/_gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/locking.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/exporting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/constants.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/xray.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/externing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/lazyio.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/monitoring.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/pymolhttpd.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/feedingback.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/constants_palette.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/importing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/commanding.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/stereochemistry copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/stereochemistry/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/stereochemistry copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/vfont.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol2 copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol2/cmd2.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol2 copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol2/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol2 creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/render.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/save_object.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/create_shortcut.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/change_confirm.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/load_aln.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/load_traj.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/png.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/load_map.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/shortcut_menu.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/colors.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/pluginitem.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/props.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/askpartial.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/fetch.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/load_mae.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/load_mtz.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/save_molecule.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/pluginmanager.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/movieexport.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/help_shortcut.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/file_dialogs.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/shortcut_menu_gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/advanced_settings_gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/scene_bin_gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/pymol_gl_widget.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/volume.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/properties_dialog.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/builder.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/mimic_pmg_tk.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/mimic_tk.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/syntax copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/syntax/pmlparser.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/syntax copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/syntax/python.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/syntax copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/syntax/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/syntax copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/syntax/pml.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/syntax copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/keymapping.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/TextEditor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/pymol_qt_gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/web creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/web/examples copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/web/examples/justhttpd.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/web/examples copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/web/examples/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/web/examples creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/skins creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/skins/normal copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/skins/normal/ModalWindow.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/skins/normal copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/skins/normal/builder.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/skins/normal copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/skins/normal/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/skins/normal copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/skins/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/skins creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/skins/demo copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/skins/demo/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/skins/demo copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/SetEditor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/PMGApp.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/volume.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/PyMOLMapLoad.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/startup copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/startup/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/startup copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/ColorEditor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/TextEditor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/Setting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/Demo.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/place.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/bond_mmff.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/protein_residues.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/charge.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/mae.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/protein_amber99.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/water_residues.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/xyz.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/fast copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/fast/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/fast copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/arc.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/pkl.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/gms.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/io.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/dictdb.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/lst.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/cif.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/mass.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/protein_amber.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/sdf.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/models.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/map.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/cc1.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/gamess1.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/bonds.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/water_amber.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/pdb.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/bmin copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/bmin/util.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/bmin copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/bmin/state.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/bmin copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/bmin/realtime.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/bmin copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/bmin/commands.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/bmin copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/bmin/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/bmin copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/cpv.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/mol2.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/mol.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/brick.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/hetatm.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/bond_amber.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/tinker copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/tinker/amber.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/tinker copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/tinker/state.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/tinker copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/tinker/realtime.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/tinker copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/tinker/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/tinker copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/tinker/keyword.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/tinker copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/solvate.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/neighbor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/mmd.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/mmtf copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/mmtf/io.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/mmtf copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/mmtf/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/mmtf creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/champ copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/champ/assign.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/champ copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/champ/amber99.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/champ copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/champ/_champ.cpython-313-aarch64-linux-gnu.so -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/champ copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/champ/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/champ copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/champ/formal_charges.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/champ copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/protein.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/fragments copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/fragments/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/fragments copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/protein_mmff.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard/sculpting.py to sculpting.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard/filter.py to filter.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard/dragging.py to dragging.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard/nucmutagenesis.py to nucmutagenesis.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard/charge.py to charge.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard/distance.py to distance.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard/command.py to command.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard/toggle.py to toggle.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard/message.py to message.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard/label.py to label.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard/cleanup.py to cleanup.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard/density.py to density.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard/pair_fit.py to pair_fit.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard/benchmark.py to benchmark.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard/box.py to box.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard/annotation.py to annotation.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard/renaming.py to renaming.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard/measurement.py to measurement.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard/mutagenesis.py to mutagenesis.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard/pseudoatom.py to pseudoatom.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard/appearance.py to appearance.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard/openvr.py to openvr.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard/stereodemo.py to stereodemo.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard/demo.py to demo.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard/security.py to security.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/morphing.py to morphing.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/computing.py to computing.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/seqalign.py to seqalign.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/keyboard.py to keyboard.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/shortcut.py to shortcut.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/util.py to util.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/xwin.py to xwin.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizarding.py to wizarding.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/diagnosing.py to diagnosing.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/helping.py to helping.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/povray.py to povray.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/controlling.py to controlling.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/fitting.py to fitting.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/preset.py to preset.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/checking.py to checking.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/querying.py to querying.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/callback.py to callback.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/parsing.py to parsing.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/moving.py to moving.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/editor.py to editor.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/shortcut_dict.py to shortcut_dict.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/internal.py to internal.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/selector.py to selector.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/viewing.py to viewing.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/save_shortcut.py to save_shortcut.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/completing.py to completing.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/selecting.py to selecting.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/keywords.py to keywords.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/cgo.py to cgo.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/headering.py to headering.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/movie.py to movie.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/colorramping.py to colorramping.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/gui.py to gui.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/cmd.py to cmd.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/plugins/repository.py to repository.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/plugins/installation.py to installation.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/plugins/legacysupport.py to legacysupport.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/plugins/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/plugins/managergui_qt.py to managergui_qt.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/plugins/managergui.py to managergui.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/invocation.py to invocation.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/colorprinting.py to colorprinting.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/api.py to api.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/menu.py to menu.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/editing.py to editing.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/rpc.py to rpc.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/cgobuilder.py to cgobuilder.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/experimenting.py to experimenting.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/parser.py to parser.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/mpeg_encode.py to mpeg_encode.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/Qt/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/Qt/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/__main__.py to __main__.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/creating.py to creating.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/setting.py to setting.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/shortcut_manager.py to shortcut_manager.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/_gui.py to _gui.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/locking.py to locking.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/exporting.py to exporting.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/constants.py to constants.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/xray.py to xray.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/externing.py to externing.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/lazyio.py to lazyio.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/monitoring.py to monitoring.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/pymolhttpd.py to pymolhttpd.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/feedingback.py to feedingback.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/constants_palette.py to constants_palette.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/importing.py to importing.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/commanding.py to commanding.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/stereochemistry/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/vfont.py to vfont.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol2/cmd2.py to cmd2.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol2/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/file_dialogs.py to file_dialogs.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/shortcut_menu_gui.py to shortcut_menu_gui.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/advanced_settings_gui.py to advanced_settings_gui.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/scene_bin_gui.py to scene_bin_gui.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/pymol_gl_widget.py to pymol_gl_widget.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/volume.py to volume.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/properties_dialog.py to properties_dialog.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/builder.py to builder.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/mimic_pmg_tk.py to mimic_pmg_tk.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/mimic_tk.py to mimic_tk.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/syntax/pmlparser.py to pmlparser.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/syntax/python.py to python.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/syntax/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/syntax/pml.py to pml.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/keymapping.py to keymapping.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/TextEditor.py to TextEditor.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/pymol_qt_gui.py to pymol_qt_gui.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/web/examples/justhttpd.py to justhttpd.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/web/examples/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/skins/normal/ModalWindow.py to ModalWindow.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/skins/normal/builder.py to builder.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/skins/normal/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/skins/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/skins/demo/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/SetEditor.py to SetEditor.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/PMGApp.py to PMGApp.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/volume.py to volume.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/PyMOLMapLoad.py to PyMOLMapLoad.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/startup/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/ColorEditor.py to ColorEditor.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/TextEditor.py to TextEditor.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/Setting.py to Setting.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/Demo.py to Demo.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/place.py to place.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/bond_mmff.py to bond_mmff.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/protein_residues.py to protein_residues.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/charge.py to charge.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/mae.py to mae.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/protein_amber99.py to protein_amber99.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/water_residues.py to water_residues.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/xyz.py to xyz.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/fast/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/arc.py to arc.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/pkl.py to pkl.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/gms.py to gms.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/io.py to io.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/dictdb.py to dictdb.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/lst.py to lst.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/cif.py to cif.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/mass.py to mass.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/protein_amber.py to protein_amber.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/sdf.py to sdf.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/models.py to models.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/map.py to map.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/cc1.py to cc1.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/gamess1.py to gamess1.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/bonds.py to bonds.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/water_amber.py to water_amber.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/pdb.py to pdb.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/bmin/util.py to util.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/bmin/state.py to state.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/bmin/realtime.py to realtime.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/bmin/commands.py to commands.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/bmin/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/cpv.py to cpv.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/mol2.py to mol2.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/mol.py to mol.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/brick.py to brick.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/hetatm.py to hetatm.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/bond_amber.py to bond_amber.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/tinker/amber.py to amber.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/tinker/state.py to state.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/tinker/realtime.py to realtime.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/tinker/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/tinker/keyword.py to keyword.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/solvate.py to solvate.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/neighbor.py to neighbor.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/mmd.py to mmd.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/mmtf/io.py to io.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/mmtf/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/champ/assign.py to assign.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/champ/amber99.py to amber99.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/champ/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/champ/formal_charges.py to formal_charges.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/protein.py to protein.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/fragments/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/protein_mmff.py to protein_mmff.cpython-313.pyc running install_egg_info Copying modules/pymol.egg-info to /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol-3.1.0.egg-info Skipping SOURCES.txt running install_scripts Installing pymol script to /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/bin debian/rules override_dh_install-arch make[1]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg' dh_numpy3 dh_install rm -rf debian/python*pymol/usr/bin make[1]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg' dh_installdocs -a -O--buildsystem=pybuild dh_installchangelogs -a -O--buildsystem=pybuild dh_installexamples -a -O--buildsystem=pybuild dh_installman -a -O--buildsystem=pybuild dh_python3 -a -O--buildsystem=pybuild dh_installsystemduser -a -O--buildsystem=pybuild dh_lintian -a -O--buildsystem=pybuild dh_perl -a -O--buildsystem=pybuild dh_link -a -O--buildsystem=pybuild dh_strip_nondeterminism -a -O--buildsystem=pybuild debian/rules override_dh_compress make[1]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg' dh_compress -Xpdb make[1]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg' dh_fixperms -a -O--buildsystem=pybuild dh_missing -a -O--buildsystem=pybuild dh_dwz -a -O--buildsystem=pybuild dh_strip -a -O--buildsystem=pybuild dh_makeshlibs -a -O--buildsystem=pybuild dh_shlibdeps -a -O--buildsystem=pybuild dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-aarch64.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged dpkg-shlibdeps: warning: debian/python3-pymol/usr/lib/python3/dist-packages/chempy/champ/_champ.cpython-314-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyModule_Create2: it is probably a plugin dpkg-shlibdeps: warning: 23 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-pymol/usr/lib/python3/dist-packages/pymol/_cmd.cpython-314-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyErr_Fetch: it is probably a plugin dpkg-shlibdeps: warning: 102 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-pymol/usr/lib/python3/dist-packages/pymol/_cmd.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyErr_Restore: it is probably a plugin dpkg-shlibdeps: warning: 102 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-pymol/usr/lib/python3/dist-packages/chempy/champ/_champ.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyList_Size: it is probably a plugin dpkg-shlibdeps: warning: 23 other similar warnings have been skipped (use -v to see them all) dh_installdeb -a -O--buildsystem=pybuild dh_gencontrol -a -O--buildsystem=pybuild dh_md5sums -a -O--buildsystem=pybuild dh_builddeb -a -O--buildsystem=pybuild dpkg-deb: building package 'python3-pymol-dbgsym' in '../python3-pymol-dbgsym_3.1.0+dfsg-1+b3_arm64.deb'. dpkg-deb: building package 'python3-pymol' in '../python3-pymol_3.1.0+dfsg-1+b3_arm64.deb'. dpkg-genbuildinfo --build=any -O../pymol_3.1.0+dfsg-1+b3_arm64.buildinfo dpkg-genchanges --build=any -O../pymol_3.1.0+dfsg-1+b3_arm64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2026-04-09T20:05:13Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes Thu, 09 Apr 2026 20:05:15 +0000 | +------------------------------------------------------------------------------+ pymol_3.1.0+dfsg-1+b3_arm64.changes: ------------------------------------ Format: 1.8 Date: Fri, 03 Apr 2026 19:17:09 +0000 Source: pymol (3.1.0+dfsg-1) Binary: python3-pymol python3-pymol-dbgsym Binary-Only: yes Architecture: arm64 Version: 3.1.0+dfsg-1+b3 Distribution: unstable Urgency: low Maintainer: Debichem Team Changed-By: arm Build Daemon (arm-ubc-03) Description: python3-pymol - Molecular Graphics System (Python 3 modules) Changes: pymol (3.1.0+dfsg-1+b3) sid; urgency=low, binary-only=yes . * Binary-only non-maintainer upload for arm64; no source changes. * Rebuild against libglew2.3 Checksums-Sha1: 4511d635fe6f55c02f4874e59b2ffed75aeda5d7 14092 pymol_3.1.0+dfsg-1+b3_arm64.buildinfo e8e0d26e8d8e763699770c80e2683844db15b86b 42197904 python3-pymol-dbgsym_3.1.0+dfsg-1+b3_arm64.deb ca1a2af01ba7cd852fb33c1ab613fe2345d1e8e0 6570460 python3-pymol_3.1.0+dfsg-1+b3_arm64.deb Checksums-Sha256: 0bf62396e02265c4f5515b2f63830d2e00f58eabf7ec6f52b13c56dd8cfdb683 14092 pymol_3.1.0+dfsg-1+b3_arm64.buildinfo a9ed18881f60264520510ee721766998b6bf60da91d0d1aae1bb815e7a38b809 42197904 python3-pymol-dbgsym_3.1.0+dfsg-1+b3_arm64.deb 07936d4e6a2b6a2fb773323aec910bda0097959d83cd72176220530127929221 6570460 python3-pymol_3.1.0+dfsg-1+b3_arm64.deb Files: 68964e85eb45c5c15b5e248a974a62cc 14092 science optional pymol_3.1.0+dfsg-1+b3_arm64.buildinfo ebb40e94b5f6ad44219039b476e8ed9d 42197904 debug optional python3-pymol-dbgsym_3.1.0+dfsg-1+b3_arm64.deb 72300aa08a59f51800458d23e3465e4b 6570460 python optional python3-pymol_3.1.0+dfsg-1+b3_arm64.deb +------------------------------------------------------------------------------+ | Buildinfo Thu, 09 Apr 2026 20:05:16 +0000 | +------------------------------------------------------------------------------+ Format: 1.0 Source: pymol (3.1.0+dfsg-1) Binary: python3-pymol python3-pymol-dbgsym Architecture: arm64 Version: 3.1.0+dfsg-1+b3 Binary-Only-Changes: pymol (3.1.0+dfsg-1+b3) sid; urgency=low, binary-only=yes . * Binary-only non-maintainer upload for arm64; no source changes. * Rebuild against libglew2.3 . -- arm Build Daemon (arm-ubc-03) Fri, 03 Apr 2026 19:17:09 +0000 Checksums-Md5: ebb40e94b5f6ad44219039b476e8ed9d 42197904 python3-pymol-dbgsym_3.1.0+dfsg-1+b3_arm64.deb 72300aa08a59f51800458d23e3465e4b 6570460 python3-pymol_3.1.0+dfsg-1+b3_arm64.deb Checksums-Sha1: e8e0d26e8d8e763699770c80e2683844db15b86b 42197904 python3-pymol-dbgsym_3.1.0+dfsg-1+b3_arm64.deb ca1a2af01ba7cd852fb33c1ab613fe2345d1e8e0 6570460 python3-pymol_3.1.0+dfsg-1+b3_arm64.deb Checksums-Sha256: a9ed18881f60264520510ee721766998b6bf60da91d0d1aae1bb815e7a38b809 42197904 python3-pymol-dbgsym_3.1.0+dfsg-1+b3_arm64.deb 07936d4e6a2b6a2fb773323aec910bda0097959d83cd72176220530127929221 6570460 python3-pymol_3.1.0+dfsg-1+b3_arm64.deb Build-Origin: Debian Build-Architecture: arm64 Build-Date: Thu, 09 Apr 2026 20:05:13 +0000 Build-Path: /build/reproducible-path/pymol-3.1.0+dfsg Installed-Build-Depends: autoconf (= 2.72-6), automake (= 1:1.18.1-4), autopoint (= 0.23.2-2), autotools-dev (= 20240727.1), base-files (= 14), base-passwd (= 3.6.8+b1), bash (= 5.3-2), binutils (= 2.46-3), binutils-aarch64-linux-gnu (= 2.46-3), binutils-common (= 2.46-3), bsdextrautils (= 2.42-1), build-essential (= 12.12), bzip2 (= 1.0.8-6+b1), cmake (= 4.3.1-1), comerr-dev (= 2.1-1.47.4-1), coreutils (= 9.10-1), cpp (= 4:15.2.0-5), cpp-15 (= 15.2.0-16), cpp-15-aarch64-linux-gnu (= 15.2.0-16), cpp-aarch64-linux-gnu (= 4:15.2.0-5), dash (= 0.5.12-12+b1), debconf (= 1.5.92), debhelper (= 13.31), debianutils (= 5.23.2+b1), dh-autoreconf (= 22), dh-python (= 7.20260309), dh-strip-nondeterminism (= 1.15.0-1), diffutils (= 1:3.12-1+b1), dpkg (= 1.23.7), dpkg-dev (= 1.23.7), dwz (= 0.16-4), file (= 1:5.46-5+b1), findutils (= 4.10.0-3+b1), fontconfig (= 2.17.1-5), fontconfig-config (= 2.17.1-5), fonts-dejavu-core (= 2.37-8), fonts-dejavu-mono (= 2.37-8), fonts-lmodern (= 2.005-1), freeglut3-dev (= 3.4.0-6+b1), g++ (= 4:15.2.0-5), g++-15 (= 15.2.0-16), g++-15-aarch64-linux-gnu (= 15.2.0-16), g++-aarch64-linux-gnu (= 4:15.2.0-5), gcc (= 4:15.2.0-5), gcc-15 (= 15.2.0-16), gcc-15-aarch64-linux-gnu (= 15.2.0-16), gcc-15-base (= 15.2.0-16), gcc-16-base (= 16-20260322-1), gcc-aarch64-linux-gnu (= 4:15.2.0-5), gettext (= 0.23.2-2), gettext-base (= 0.23.2-2), grep (= 3.12-1+b1), groff-base (= 1.23.0-10+b1), gzip (= 1.13-1+b1), hdf5-helpers (= 1.14.6+repack-2), hostname (= 3.25+b1), init-system-helpers (= 1.69), intltool-debian (= 0.35.0+20060710.6), krb5-multidev (= 1.22.1-2), libacl1 (= 2.3.2-3), libaec-dev (= 1.1.6-1), libaec0 (= 1.1.6-1), libarchive-zip-perl (= 1.68-1), libarchive13t64 (= 3.8.5-1), libasan8 (= 16-20260322-1), libatomic1 (= 16-20260322-1), libattr1 (= 1:2.5.2-4), libaudit-common (= 1:4.1.2-1), libaudit1 (= 1:4.1.2-1+b1), libavahi-client3 (= 0.8-18), libavahi-common-data (= 0.8-18), libavahi-common3 (= 0.8-18), libbinutils (= 2.46-3), libblas3 (= 3.12.1-7+b1), libblkid1 (= 2.42-1), libbrotli-dev (= 1.2.0-3), libbrotli1 (= 1.2.0-3), libbsd0 (= 0.12.2-2+b1), libbz2-1.0 (= 1.0.8-6+b1), libbz2-dev (= 1.0.8-6+b1), libc-bin (= 2.42-14), libc-dev-bin (= 2.42-14), libc-gconv-modules-extra (= 2.42-14), libc6 (= 2.42-14), libc6-dev (= 2.42-14), libcairo2 (= 1.18.4-3), libcap-ng0 (= 0.9.2-1), libcc1-0 (= 16-20260322-1), libcom-err2 (= 1.47.4-1), libcrypt1 (= 1:4.5.1-1), libctf-nobfd0 (= 2.46-3), libctf0 (= 2.46-3), libcups2t64 (= 2.4.16-1), libcurl3t64-gnutls (= 8.19.0-3), libcurl4-openssl-dev (= 8.19.0-3), libcurl4t64 (= 8.19.0-3), libdb5.3t64 (= 5.3.28+dfsg2-11), libdbus-1-3 (= 1.16.2-4), libdebconfclient0 (= 0.282+b2), libdebhelper-perl (= 13.31), libdouble-conversion3 (= 3.4.0-1), libdpkg-perl (= 1.23.7), libdrm-amdgpu1 (= 2.4.131-1), libdrm-common (= 2.4.131-1), libdrm2 (= 2.4.131-1), libedit2 (= 3.1-20251016-1), libegl-mesa0 (= 26.0.4-1), libegl1 (= 1.7.0-3), libelf1t64 (= 0.194-4), libevdev2 (= 1.13.6+dfsg-1), libevent-2.1-7t64 (= 2.1.12-stable-10+b2), libexpat1 (= 2.7.5-1), libexpat1-dev (= 2.7.5-1), libffi8 (= 3.5.2-4), libfile-stripnondeterminism-perl (= 1.15.0-1), libfontconfig1 (= 2.17.1-5), libfreetype-dev (= 2.14.3+dfsg-1), libfreetype6 (= 2.14.3+dfsg-1), libgbm1 (= 26.0.4-1), libgcc-15-dev (= 15.2.0-16), libgcc-s1 (= 16-20260322-1), libgdbm-compat4t64 (= 1.26-1+b1), libgdbm6t64 (= 1.26-1+b1), libgfortran5 (= 16-20260322-1), libgl-dev (= 1.7.0-3), libgl1 (= 1.7.0-3), libgl1-mesa-dri (= 26.0.4-1), libgles2 (= 1.7.0-3), libglew-dev (= 2.3.1-3), libglew2.3 (= 2.3.1-3), libglib2.0-0t64 (= 2.88.0-1), libglm-dev (= 1.0.1+ds-3), libglu1-mesa (= 9.0.2-1.1+b4), libglu1-mesa-dev (= 9.0.2-1.1+b4), libglut-dev (= 3.4.0-6+b1), libglut3.12 (= 3.4.0-6+b1), libglvnd0 (= 1.7.0-3), libglx-dev (= 1.7.0-3), libglx-mesa0 (= 26.0.4-1), libglx0 (= 1.7.0-3), libgmp-dev (= 2:6.3.0+dfsg-5+b1), libgmp10 (= 2:6.3.0+dfsg-5+b1), libgmpxx4ldbl (= 2:6.3.0+dfsg-5+b1), libgnutls-dane0t64 (= 3.8.12-3), libgnutls28-dev (= 3.8.12-3), libgnutls30t64 (= 3.8.12-3), libgomp1 (= 16-20260322-1), libgprofng0 (= 2.46-3), libgraphite2-3 (= 1.3.14-13), libgssapi-krb5-2 (= 1.22.1-2), libgssrpc4t64 (= 1.22.1-2), libgudev-1.0-0 (= 238-7+b1), libharfbuzz0b (= 12.3.2-2+b2), libhdf5-310 (= 1.14.6+repack-2), libhdf5-cpp-310 (= 1.14.6+repack-2), libhdf5-dev (= 1.14.6+repack-2), libhdf5-fortran-310 (= 1.14.6+repack-2), libhdf5-hl-310 (= 1.14.6+repack-2), libhdf5-hl-cpp-310 (= 1.14.6+repack-2), libhdf5-hl-fortran-310 (= 1.14.6+repack-2), libhogweed6t64 (= 3.10.2-1), libhwasan0 (= 16-20260322-1), libice-dev (= 2:1.1.1-1+b1), libice6 (= 2:1.1.1-1+b1), libicu78 (= 78.3-1), libidn2-0 (= 2.3.8-4+b1), libidn2-dev (= 2.3.8-4+b1), libinput-bin (= 1.31.0-1), libinput10 (= 1.31.0-1), libisl23 (= 0.27-2), libitm1 (= 16-20260322-1), libjansson4 (= 2.14-2+b4), libjpeg-dev (= 1:2.1.5-4), libjpeg62-turbo (= 1:2.1.5-4), libjpeg62-turbo-dev (= 1:2.1.5-4), libjs-sphinxdoc (= 8.2.3-12), libjsoncpp26 (= 1.9.6-5), libk5crypto3 (= 1.22.1-2), libkadm5clnt-mit12 (= 1.22.1-2), libkadm5srv-mit12 (= 1.22.1-2), libkdb5-10t64 (= 1.22.1-2), libkeyutils1 (= 1.6.3-6+b1), libkpathsea6 (= 2025.20250727.75242+ds-5+b2), libkrb5-3 (= 1.22.1-2), libkrb5-dev (= 1.22.1-2), libkrb5support0 (= 1.22.1-2), liblapack3 (= 3.12.1-7+b1), libldap-dev (= 2.6.10+dfsg-1+b1), libldap2 (= 2.6.10+dfsg-1+b1), libllvm21 (= 1:21.1.8-7), liblsan0 (= 16-20260322-1), liblz4-1 (= 1.10.0-8), liblzma-dev (= 5.8.2-2), liblzma5 (= 5.8.2-2), libmagic-mgc (= 1:5.46-5+b1), libmagic1t64 (= 1:5.46-5+b1), libmd0 (= 1.1.0-2+b2), libmd4c0 (= 0.5.2-2+b2), libmount1 (= 2.42-1), libmpc3 (= 1.3.1-3), libmpfi0 (= 1.5.4+ds-5), libmpfr6 (= 4.2.2-3), libmtdev1t64 (= 1.1.7-1+b1), libncursesw6 (= 6.6+20251231-1), libnetcdf-dev (= 1:4.10.0-1), libnetcdf22 (= 1:4.10.0-1), libnettle8t64 (= 3.10.2-1), libnghttp2-14 (= 1.68.1-1), libnghttp2-dev (= 1.68.1-1), libnghttp3-9 (= 1.15.0-1), libnghttp3-dev (= 1.15.0-1), libngtcp2-16 (= 1.21.0-1), libngtcp2-crypto-gnutls8 (= 1.21.0-1), libngtcp2-crypto-ossl-dev (= 1.21.0-1), libngtcp2-crypto-ossl0 (= 1.21.0-1), libngtcp2-dev (= 1.21.0-1), libopengl-dev (= 1.7.0-3), libopengl0 (= 1.7.0-3), libp11-kit-dev (= 0.26.2-2), libp11-kit0 (= 0.26.2-2), libpam-modules (= 1.7.0-5+b1), libpam-modules-bin (= 1.7.0-5+b1), libpam-runtime (= 1.7.0-5), libpam0g (= 1.7.0-5+b1), libpaper-utils (= 2.2.5-0.3+b3), libpaper2 (= 2.2.5-0.3+b3), libpcre2-16-0 (= 10.46-1+b1), libpcre2-8-0 (= 10.46-1+b1), libperl5.40 (= 5.40.1-7), libpipeline1 (= 1.5.8-2), libpixman-1-0 (= 0.46.4-1+b1), libpkgconf7 (= 2.5.1-4), libpng-dev (= 1.6.56-1), libpng16-16t64 (= 1.6.56-1), libpotrace0 (= 1.16-2+b3), libproc2-0 (= 2:4.0.4-9+b1), libpsl-dev (= 0.21.5-1), libpsl5t64 (= 0.21.5-1), libptexenc1 (= 2025.20250727.75242+ds-5+b2), libpython3-all-dev (= 3.13.9-3), libpython3-dev (= 3.13.9-3), libpython3-stdlib (= 3.13.9-3), libpython3.13 (= 3.13.12-1), libpython3.13-dev (= 3.13.12-1), libpython3.13-minimal (= 3.13.12-1), libpython3.13-stdlib (= 3.13.12-1), libpython3.14 (= 3.14.3-5), libpython3.14-dev (= 3.14.3-5), libpython3.14-minimal (= 3.14.3-5), libpython3.14-stdlib (= 3.14.3-5), libqt5core5t64 (= 5.15.17+dfsg-7+b1), libqt5dbus5t64 (= 5.15.17+dfsg-7+b1), libqt5designer5 (= 5.15.17-4+b1), libqt5gui5t64 (= 5.15.17+dfsg-7+b1), libqt5help5 (= 5.15.17-4+b1), libqt5network5t64 (= 5.15.17+dfsg-7+b1), libqt5opengl5t64 (= 5.15.17+dfsg-7+b1), libqt5printsupport5t64 (= 5.15.17+dfsg-7+b1), libqt5sql5t64 (= 5.15.17+dfsg-7+b1), libqt5test5t64 (= 5.15.17+dfsg-7+b1), libqt5widgets5t64 (= 5.15.17+dfsg-7+b1), libqt5xml5t64 (= 5.15.17+dfsg-7+b1), libreadline8t64 (= 8.3-4), librhash1 (= 1.4.6-1.1), librtmp-dev (= 2.4+20151223.gitfa8646d.1-3+b1), librtmp1 (= 2.4+20151223.gitfa8646d.1-3+b1), libsasl2-2 (= 2.1.28+dfsg1-10), libsasl2-modules-db (= 2.1.28+dfsg1-10), libseccomp2 (= 2.6.0-2+b1), libselinux1 (= 3.9-4+b1), libsensors-config (= 1:3.6.2-2), libsensors5 (= 1:3.6.2-2+b1), libsframe3 (= 2.46-3), libsm-dev (= 2:1.2.6-1+b1), libsm6 (= 2:1.2.6-1+b1), libsmartcols1 (= 2.42-1), libsqlite3-0 (= 3.46.1-9+b1), libssh2-1-dev (= 1.11.1-2), libssh2-1t64 (= 1.11.1-2), libssl-dev (= 3.6.1-3), libssl3t64 (= 3.6.1-3), libstdc++-15-dev (= 15.2.0-16), libstdc++6 (= 16-20260322-1), libsynctex2 (= 2025.20250727.75242+ds-5+b2), libsystemd0 (= 260.1-1), libsz2 (= 1.1.6-1), libtasn1-6 (= 4.21.0-2), libtasn1-6-dev (= 4.21.0-2), libteckit0 (= 2.5.13+ds-1), libtexlua53-5 (= 2025.20250727.75242+ds-5+b2), libtext-charwidth-perl (= 0.04-11+b5), libtext-wrapi18n-perl (= 0.06-10), libtinfo6 (= 6.6+20251231-1), libtool (= 2.5.4-10), libtsan2 (= 16-20260322-1), libubsan1 (= 16-20260322-1), libuchardet0 (= 0.0.8-2+b1), libudev1 (= 260.1-1), libunbound8 (= 1.24.2-1), libunistring5 (= 1.4.2-1), libuuid1 (= 2.42-1), libuv1t64 (= 1.51.0-2+b1), libvulkan1 (= 1.4.341.0-1), libwacom-common (= 2.18.0-1), libwacom9 (= 2.18.0-1), libwayland-client0 (= 1.24.0-2+b2), libx11-6 (= 2:1.8.13-1), libx11-data (= 2:1.8.13-1), libx11-dev (= 2:1.8.13-1), libx11-xcb1 (= 2:1.8.13-1), libxau-dev (= 1:1.0.11-1+b1), libxau6 (= 1:1.0.11-1+b1), libxaw7 (= 2:1.0.16-1+b1), libxcb-dri3-0 (= 1.17.0-2+b2), libxcb-glx0 (= 1.17.0-2+b2), libxcb-icccm4 (= 0.4.2-1+b1), libxcb-image0 (= 0.4.0-2+b3), libxcb-keysyms1 (= 0.4.1-1+b1), libxcb-present0 (= 1.17.0-2+b2), libxcb-randr0 (= 1.17.0-2+b2), libxcb-render-util0 (= 0.3.10-1+b1), libxcb-render0 (= 1.17.0-2+b2), libxcb-shape0 (= 1.17.0-2+b2), libxcb-shm0 (= 1.17.0-2+b2), libxcb-sync1 (= 1.17.0-2+b2), libxcb-util1 (= 0.4.1-1+b1), libxcb-xfixes0 (= 1.17.0-2+b2), libxcb-xinerama0 (= 1.17.0-2+b2), libxcb-xinput0 (= 1.17.0-2+b2), libxcb-xkb1 (= 1.17.0-2+b2), libxcb1 (= 1.17.0-2+b2), libxcb1-dev (= 1.17.0-2+b2), libxdmcp-dev (= 1:1.1.5-2), libxdmcp6 (= 1:1.1.5-2), libxext-dev (= 2:1.3.4-1+b4), libxext6 (= 2:1.3.4-1+b4), libxi6 (= 2:1.8.2-2), libxkbcommon-x11-0 (= 1.13.1-1), libxkbcommon0 (= 1.13.1-1), libxml2-16 (= 2.15.2+dfsg-0.1), libxml2-dev (= 2.15.2+dfsg-0.1), libxmu6 (= 2:1.1.3-4), libxpm4 (= 1:3.5.17-1+b4), libxrender1 (= 1:0.9.12-1+b1), libxshmfence1 (= 1.3.3-1+b1), libxt-dev (= 1:1.2.1-1.3+b1), libxt6t64 (= 1:1.2.1-1.3+b1), libxxf86vm1 (= 1:1.1.4-2), libxxhash0 (= 0.8.3-2+b1), libz3-4 (= 4.13.3-1+b1), libzstd-dev (= 1.5.7+dfsg-3+b1), libzstd1 (= 1.5.7+dfsg-3+b1), libzzip-0-13t64 (= 0.13.78+dfsg.1-0.2), linux-libc-dev (= 6.19.10-1), m4 (= 1.4.21-1), make (= 4.4.1-3+b1), man-db (= 2.13.1-1+b1), mawk (= 1.3.4.20260302-1), media-types (= 14.0.0), mesa-libgallium (= 26.0.4-1), ncurses-base (= 6.6+20251231-1), ncurses-bin (= 6.6+20251231-1), netbase (= 6.5), nettle-dev (= 3.10.2-1), openssl-provider-legacy (= 3.6.1-3), patch (= 2.8-2+b1), perl (= 5.40.1-7), perl-base (= 5.40.1-7), perl-modules-5.40 (= 5.40.1-7), pkgconf (= 2.5.1-4), pkgconf-bin (= 2.5.1-4), po-debconf (= 1.0.22), procps (= 2:4.0.4-9+b1), python3 (= 3.13.9-3), python3-all (= 3.13.9-3), python3-all-dev (= 3.13.9-3), python3-autocommand (= 2.2.2-4), python3-dev (= 3.13.9-3), python3-inflect (= 7.5.0-1), python3-jaraco.context (= 6.0.1-2), python3-jaraco.functools (= 4.1.0-1), python3-jaraco.text (= 4.0.0-1), python3-minimal (= 3.13.9-3), python3-more-itertools (= 10.8.0-1), python3-numpy (= 1:2.3.5+ds-3), python3-numpy-dev (= 1:2.3.5+ds-3), python3-opengl (= 3.1.10+dfsg-1), python3-pkg-resources (= 78.1.1-0.1), python3-pyqt5 (= 5.15.11+dfsg-3), python3-pyqt5.qtopengl (= 5.15.11+dfsg-3), python3-pyqt5.sip (= 12.17.2-1), python3-setuptools (= 78.1.1-0.1), python3-typeguard (= 4.4.4-2), python3-typing-extensions (= 4.15.0-2), python3-zipp (= 3.23.0-1), python3.13 (= 3.13.12-1), python3.13-dev (= 3.13.12-1), python3.13-minimal (= 3.13.12-1), python3.14 (= 3.14.3-5), python3.14-dev (= 3.14.3-5), python3.14-minimal (= 3.14.3-5), readline-common (= 8.3-4), rpcsvc-proto (= 1.4.3-1+b2), sed (= 4.9-2+b2), sensible-utils (= 0.0.26), shared-mime-info (= 2.4-5+b4), sysvinit-utils (= 3.18-1), t1utils (= 1.41-4+b2), tar (= 1.35+dfsg-4), tex-common (= 6.20), texlive-base (= 2025.20260124-1), texlive-binaries (= 2025.20250727.75242+ds-5+b2), texlive-latex-base (= 2025.20260124-1), tzdata (= 2026a-3), ucf (= 3.0053), util-linux (= 2.42-1), uuid-dev (= 2.42-1), x11-common (= 1:7.7+26), x11proto-dev (= 2025.1-1), xdg-utils (= 1.2.1-2), xkb-data (= 2.47-1), xorg-sgml-doctools (= 1:1.12.1-1), xtrans-dev (= 1.6.0-1), xz-utils (= 5.8.2-2), zlib1g (= 1:1.3.dfsg+really1.3.2-3), zlib1g-dev (= 1:1.3.dfsg+really1.3.2-3) Environment: DEB_BUILD_OPTIONS="parallel=8" LANG="C.UTF-8" LC_COLLATE="C.UTF-8" LC_CTYPE="C.UTF-8" SOURCE_DATE_EPOCH="1775243829" +------------------------------------------------------------------------------+ | Package contents Thu, 09 Apr 2026 20:05:16 +0000 | +------------------------------------------------------------------------------+ python3-pymol-dbgsym_3.1.0+dfsg-1+b3_arm64.deb ---------------------------------------------- new Debian package, version 2.0. size 42197904 bytes: control archive=760 bytes. 524 bytes, 12 lines control 515 bytes, 5 lines md5sums Package: python3-pymol-dbgsym Source: pymol (3.1.0+dfsg-1) Version: 3.1.0+dfsg-1+b3 Auto-Built-Package: debug-symbols Architecture: arm64 Maintainer: Debichem Team Installed-Size: 52697 Depends: python3-pymol (= 3.1.0+dfsg-1+b3) Section: debug Priority: optional Description: debug symbols for python3-pymol Build-Ids: 0643666f37454083d207105e4ecf3bd1ab81b674 49da2505fd28d2046a7073f4728c9f9e5000424a 5716e2043cd99ca7c27c291ab7aa3e0d8a38a3a9 f0bde284392efac9b461dbf164db7c2fff8e55c5 drwxr-xr-x root/root 0 2026-04-03 19:17 ./ drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/ drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/lib/ drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/lib/debug/ drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/lib/debug/.build-id/06/ -rw-r--r-- root/root 190000 2026-04-03 19:17 ./usr/lib/debug/.build-id/06/43666f37454083d207105e4ecf3bd1ab81b674.debug drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/lib/debug/.build-id/49/ -rw-r--r-- root/root 24244944 2026-04-03 19:17 ./usr/lib/debug/.build-id/49/da2505fd28d2046a7073f4728c9f9e5000424a.debug drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/lib/debug/.build-id/57/ -rw-r--r-- root/root 190032 2026-04-03 19:17 ./usr/lib/debug/.build-id/57/16e2043cd99ca7c27c291ab7aa3e0d8a38a3a9.debug drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/lib/debug/.build-id/f0/ -rw-r--r-- root/root 24222544 2026-04-03 19:17 ./usr/lib/debug/.build-id/f0/bde284392efac9b461dbf164db7c2fff8e55c5.debug drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/lib/debug/.dwz/aarch64-linux-gnu/ -rw-r--r-- root/root 5096848 2026-04-03 19:17 ./usr/lib/debug/.dwz/aarch64-linux-gnu/python3-pymol.debug drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/share/ drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/share/doc/ lrwxrwxrwx root/root 0 2026-04-03 19:17 ./usr/share/doc/python3-pymol-dbgsym -> python3-pymol python3-pymol_3.1.0+dfsg-1+b3_arm64.deb --------------------------------------- new Debian package, version 2.0. size 6570460 bytes: control archive=7088 bytes. 1367 bytes, 26 lines control 19357 bytes, 225 lines md5sums 281 bytes, 12 lines * postinst #!/bin/sh 419 bytes, 12 lines * prerm #!/bin/sh Package: python3-pymol Source: pymol (3.1.0+dfsg-1) Version: 3.1.0+dfsg-1+b3 Architecture: arm64 Maintainer: Debichem Team Installed-Size: 22552 Depends: python3-legacy-cgi, python3-numpy, python3-opengl, python3-pyqt5, python3-pyqt5.qtopengl, python3-numpy2-abi0 | python3-numpy-abi9, python3 (<< 3.15), python3 (>= 3.13~), python3:any, libc6 (>= 2.38), libfreetype6 (>= 2.2.1), libgcc-s1 (>= 3.0), libgl1, libglew2.3 (>= 2.3.1), libgomp1 (>= 4.9), libnetcdf22 (>= 3.6.1), libpng16-16t64 (>= 1.6.46), libstdc++6 (>= 13.1), libxml2-16 (>= 2.14.1), pymol-data (= 3.1.0+dfsg-1) Section: python Priority: optional Homepage: https://www.pymol.org Description: Molecular Graphics System (Python 3 modules) PyMOL is a molecular graphics system targeted at medium to large biomolecules like proteins. It can generate high-quality publication-ready molecular graphics images and animations. . Features include: * Visualization of molecules, molecular trajectories and surfaces of crystallography data or orbitals * Molecular builder and sculptor * Internal raytracer and movie generator * Fully extensible and scriptable via a Python interface . File formats PyMOL can read include PDB, XYZ, CIF, MDL Molfile, ChemDraw, CCP4 maps, XPLOR maps and Gaussian cube maps. . This package contains the Python 3 modules. drwxr-xr-x root/root 0 2026-04-03 19:17 ./ drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/ drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/lib/ drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/lib/python3/ drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/lib/python3/dist-packages/ drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/lib/python3/dist-packages/chempy/ -rw-r--r-- root/root 15991 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/__init__.py -rw-r--r-- root/root 1354 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/arc.py drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/lib/python3/dist-packages/chempy/bmin/ -rw-r--r-- root/root 1413 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/bmin/__init__.py -rw-r--r-- root/root 1233 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/bmin/commands.py -rw-r--r-- root/root 3230 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/bmin/realtime.py -rw-r--r-- root/root 3148 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/bmin/state.py -rw-r--r-- root/root 1673 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/bmin/util.py -rw-r--r-- root/root 4747 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/bond_amber.py -rw-r--r-- root/root 4205 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/bond_mmff.py -rw-r--r-- root/root 24301 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/bonds.py -rw-r--r-- root/root 2058 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/brick.py -rw-r--r-- root/root 2130 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/cc1.py drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/lib/python3/dist-packages/chempy/champ/ -rw-r--r-- root/root 9411 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/champ/__init__.py -rw-r--r-- root/root 134384 2026-04-03 19:17 ./usr/lib/python3/dist-packages/chempy/champ/_champ.cpython-313-aarch64-linux-gnu.so -rw-r--r-- root/root 134384 2026-04-03 19:17 ./usr/lib/python3/dist-packages/chempy/champ/_champ.cpython-314-aarch64-linux-gnu.so -rw-r--r-- root/root 77045 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/champ/amber99.py -rw-r--r-- root/root 8985 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/champ/assign.py -rw-r--r-- root/root 5784 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/champ/formal_charges.py -rw-r--r-- root/root 4080 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/charge.py -rw-r--r-- root/root 25494 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/cif.py -rw-r--r-- root/root 13742 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/cpv.py -rw-r--r-- root/root 24958 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/dictdb.py drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/lib/python3/dist-packages/chempy/fast/ -rw-r--r-- root/root 5008 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/fast/__init__.py drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/lib/python3/dist-packages/chempy/fragments/ -rw-r--r-- root/root 133 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/fragments/__init__.py -rw-r--r-- root/root 22373 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/gamess1.py -rw-r--r-- root/root 3081 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/gms.py -rw-r--r-- root/root 8020 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/hetatm.py -rw-r--r-- root/root 1268 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/io.py -rw-r--r-- root/root 1183 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/lst.py -rw-r--r-- root/root 12252 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/mae.py -rw-r--r-- root/root 1898 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/map.py -rw-r--r-- root/root 1496 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/mass.py -rw-r--r-- root/root 7564 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/mmd.py drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/lib/python3/dist-packages/chempy/mmtf/ -rw-r--r-- root/root 4475 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/mmtf/__init__.py -rw-r--r-- root/root 7261 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/mmtf/io.py -rw-r--r-- root/root 24485 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/models.py -rw-r--r-- root/root 4792 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/mol.py -rw-r--r-- root/root 3737 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/mol2.py -rw-r--r-- root/root 2428 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/neighbor.py -rw-r--r-- root/root 3708 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/pdb.py -rw-r--r-- root/root 3652 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/pkl.py -rw-r--r-- root/root 14803 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/place.py -rw-r--r-- root/root 19118 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/protein.py -rw-r--r-- root/root 83108 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/protein_amber.py -rw-r--r-- root/root 83144 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/protein_amber99.py -rw-r--r-- root/root 75507 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/protein_mmff.py -rw-r--r-- root/root 140484 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/protein_residues.py -rw-r--r-- root/root 5168 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/sdf.py -rw-r--r-- root/root 2038 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/solvate.py drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/lib/python3/dist-packages/chempy/tinker/ -rw-r--r-- root/root 5242 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/tinker/__init__.py -rw-r--r-- root/root 33342 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/tinker/amber.py -rw-r--r-- root/root 1926 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/tinker/keyword.py -rw-r--r-- root/root 5937 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/tinker/realtime.py -rw-r--r-- root/root 9315 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/tinker/state.py -rw-r--r-- root/root 1096 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/water_amber.py -rw-r--r-- root/root 1450 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/water_residues.py -rw-r--r-- root/root 3081 2025-01-25 04:19 ./usr/lib/python3/dist-packages/chempy/xyz.py drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/lib/python3/dist-packages/pmg_qt/ -rw-r--r-- root/root 5632 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_qt/TextEditor.py -rw-r--r-- root/root 49 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_qt/__init__.py -rw-r--r-- root/root 3356 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_qt/advanced_settings_gui.py -rw-r--r-- root/root 58545 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_qt/builder.py -rw-r--r-- root/root 28911 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_qt/file_dialogs.py drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/lib/python3/dist-packages/pmg_qt/forms/ -rw-r--r-- root/root 0 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_qt/forms/__init__.py -rw-r--r-- root/root 5236 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_qt/forms/askpartial.ui -rw-r--r-- root/root 2038 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_qt/forms/change_confirm.ui -rw-r--r-- root/root 5094 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_qt/forms/colors.ui -rw-r--r-- root/root 1996 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_qt/forms/create_shortcut.ui -rw-r--r-- root/root 7828 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_qt/forms/fetch.ui -rw-r--r-- root/root 4966 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_qt/forms/help_shortcut.ui -rw-r--r-- root/root 2577 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_qt/forms/load_aln.ui -rw-r--r-- root/root 5538 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_qt/forms/load_mae.ui -rw-r--r-- root/root 8947 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_qt/forms/load_map.ui -rw-r--r-- root/root 5572 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_qt/forms/load_mtz.ui -rw-r--r-- root/root 6465 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_qt/forms/load_traj.ui -rw-r--r-- root/root 10840 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_qt/forms/movieexport.ui -rw-r--r-- root/root 3016 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_qt/forms/pluginitem.ui -rw-r--r-- root/root 15187 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_qt/forms/pluginmanager.ui -rw-r--r-- root/root 2576 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_qt/forms/png.ui -rw-r--r-- root/root 2443 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_qt/forms/props.ui -rw-r--r-- root/root 12996 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_qt/forms/render.ui -rw-r--r-- root/root 11101 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_qt/forms/save_molecule.ui -rw-r--r-- root/root 1292 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_qt/forms/save_object.ui -rw-r--r-- root/root 1546 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_qt/forms/shortcut_menu.ui -rw-r--r-- root/root 2758 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_qt/keymapping.py -rw-r--r-- root/root 4709 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_qt/mimic_pmg_tk.py -rw-r--r-- root/root 4105 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_qt/mimic_tk.py -rw-r--r-- root/root 16008 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_qt/properties_dialog.py -rw-r--r-- root/root 7905 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_qt/pymol_gl_widget.py -rw-r--r-- root/root 42768 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_qt/pymol_qt_gui.py -rw-r--r-- root/root 14633 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_qt/scene_bin_gui.py -rw-r--r-- root/root 16820 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_qt/shortcut_menu_gui.py drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/lib/python3/dist-packages/pmg_qt/syntax/ -rw-r--r-- root/root 478 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_qt/syntax/__init__.py -rw-r--r-- root/root 3944 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_qt/syntax/pml.py -rw-r--r-- root/root 3492 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_qt/syntax/pmlparser.py -rw-r--r-- root/root 3912 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_qt/syntax/python.py -rw-r--r-- root/root 30519 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_qt/volume.py drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/lib/python3/dist-packages/pmg_tk/ -rw-r--r-- root/root 5081 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_tk/ColorEditor.py -rw-r--r-- root/root 92 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_tk/Demo.py -rw-r--r-- root/root 13784 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_tk/PMGApp.py -rw-r--r-- root/root 14835 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_tk/PyMOLMapLoad.py -rw-r--r-- root/root 5270 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_tk/SetEditor.py -rw-r--r-- root/root 4913 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_tk/Setting.py -rw-r--r-- root/root 4399 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_tk/TextEditor.py -rw-r--r-- root/root 1347 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_tk/__init__.py drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/lib/python3/dist-packages/pmg_tk/skins/ -rw-r--r-- root/root 283 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_tk/skins/__init__.py drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/lib/python3/dist-packages/pmg_tk/skins/demo/ -rw-r--r-- root/root 2544 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_tk/skins/demo/__init__.py drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/lib/python3/dist-packages/pmg_tk/skins/normal/ -rw-r--r-- root/root 3689 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_tk/skins/normal/ModalWindow.py -rw-r--r-- root/root 56917 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_tk/skins/normal/__init__.py -rw-r--r-- root/root 56320 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_tk/skins/normal/builder.py drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/lib/python3/dist-packages/pmg_tk/startup/ -rw-r--r-- root/root 1454 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_tk/startup/__init__.py -rw-r--r-- root/root 33197 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pmg_tk/volume.py drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/lib/python3/dist-packages/pymol-3.1.0.egg-info/ -rw-r--r-- root/root 4163 2026-04-03 19:17 ./usr/lib/python3/dist-packages/pymol-3.1.0.egg-info/PKG-INFO -rw-r--r-- root/root 1 2026-04-03 19:17 ./usr/lib/python3/dist-packages/pymol-3.1.0.egg-info/dependency_links.txt -rw-r--r-- root/root 39 2026-04-03 19:17 ./usr/lib/python3/dist-packages/pymol-3.1.0.egg-info/entry_points.txt -rw-r--r-- root/root 37 2026-04-03 19:17 ./usr/lib/python3/dist-packages/pymol-3.1.0.egg-info/requires.txt -rw-r--r-- root/root 38 2026-04-03 19:17 ./usr/lib/python3/dist-packages/pymol-3.1.0.egg-info/top_level.txt drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/lib/python3/dist-packages/pymol/ drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/lib/python3/dist-packages/pymol/Qt/ -rw-r--r-- root/root 4553 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/Qt/__init__.py -rw-r--r-- root/root 9698 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/Qt/utils.py -rw-r--r-- root/root 17612 2026-04-03 19:17 ./usr/lib/python3/dist-packages/pymol/__init__.py -rw-r--r-- root/root 158 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/__main__.py -rw-r--r-- root/root 9803352 2026-04-03 19:17 ./usr/lib/python3/dist-packages/pymol/_cmd.cpython-313-aarch64-linux-gnu.so -rw-r--r-- root/root 9737816 2026-04-03 19:17 ./usr/lib/python3/dist-packages/pymol/_cmd.cpython-314-aarch64-linux-gnu.so -rw-r--r-- root/root 54587 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/_gui.py -rw-r--r-- root/root 13037 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/api.py -rw-r--r-- root/root 614 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/callback.py -rw-r--r-- root/root 18994 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/cgo.py -rw-r--r-- root/root 9628 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/cgobuilder.py -rw-r--r-- root/root 733 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/checking.py -rw-r--r-- root/root 13440 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/cmd.py -rw-r--r-- root/root 965 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/colorprinting.py -rw-r--r-- root/root 8561 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/colorramping.py -rw-r--r-- root/root 23571 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/commanding.py -rw-r--r-- root/root 13511 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/completing.py -rw-r--r-- root/root 1054 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/computing.py -rw-r--r-- root/root 10210 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/constants.py -rw-r--r-- root/root 2820 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/constants_palette.py -rw-r--r-- root/root 28529 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/controlling.py -rw-r--r-- root/root 38072 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/creating.py -rw-r--r-- root/root 4609 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/diagnosing.py -rw-r--r-- root/root 79755 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/editing.py -rw-r--r-- root/root 47348 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/editor.py -rw-r--r-- root/root 7877 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/experimenting.py -rw-r--r-- root/root 33598 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/exporting.py -rw-r--r-- root/root 4307 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/externing.py -rw-r--r-- root/root 5709 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/feedingback.py -rw-r--r-- root/root 27067 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/fitting.py -rw-r--r-- root/root 2446 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/gui.py -rw-r--r-- root/root 14766 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/headering.py -rw-r--r-- root/root 26590 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/helping.py -rw-r--r-- root/root 57047 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/importing.py -rw-r--r-- root/root 19275 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/internal.py -rw-r--r-- root/root 22010 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/invocation.py -rw-r--r-- root/root 2514 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/keyboard.py -rw-r--r-- root/root 31075 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/keywords.py -rw-r--r-- root/root 9451 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/lazyio.py -rw-r--r-- root/root 2759 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/locking.py -rw-r--r-- root/root 95975 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/menu.py -rw-r--r-- root/root 315 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/monitoring.py -rw-r--r-- root/root 1683 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/morphing.py -rw-r--r-- root/root 32011 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/movie.py -rw-r--r-- root/root 25124 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/moving.py -rw-r--r-- root/root 5789 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/mpeg_encode.py -rw-r--r-- root/root 31160 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/parser.py -rw-r--r-- root/root 20493 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/parsing.py drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/lib/python3/dist-packages/pymol/plugins/ -rw-r--r-- root/root 12891 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/plugins/__init__.py -rw-r--r-- root/root 11031 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/plugins/installation.py -rw-r--r-- root/root 4740 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/plugins/legacysupport.py -rw-r--r-- root/root 22446 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/plugins/managergui.py -rw-r--r-- root/root 14938 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/plugins/managergui_qt.py -rw-r--r-- root/root 10576 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/plugins/repository.py -rw-r--r-- root/root 1428 2026-04-03 19:17 ./usr/lib/python3/dist-packages/pymol/povray.py -rw-r--r-- root/root 14479 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/preset.py -rw-r--r-- root/root 20577 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/pymolhttpd.py -rw-r--r-- root/root 47684 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/querying.py -rw-r--r-- root/root 13919 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/rpc.py -rw-r--r-- root/root 2092 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/save_shortcut.py -rw-r--r-- root/root 5736 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/selecting.py -rw-r--r-- root/root 224 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/selector.py -rw-r--r-- root/root 5212 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/seqalign.py -rw-r--r-- root/root 17128 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/setting.py -rw-r--r-- root/root 6461 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/shortcut.py -rw-r--r-- root/root 6834 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/shortcut_dict.py -rw-r--r-- root/root 5567 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/shortcut_manager.py drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/lib/python3/dist-packages/pymol/stereochemistry/ -rw-r--r-- root/root 657 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/stereochemistry/__init__.py lrwxrwxrwx root/root 0 2026-04-03 19:17 ./usr/lib/python3/dist-packages/pymol/test -> ../../../../share/pymol/test -rw-r--r-- root/root 39262 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/util.py -rw-r--r-- root/root 22861 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/vfont.py -rw-r--r-- root/root 62314 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/viewing.py drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/lib/python3/dist-packages/pymol/wizard/ -rw-r--r-- root/root 2384 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/wizard/__init__.py -rw-r--r-- root/root 2601 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/wizard/annotation.py -rw-r--r-- root/root 9011 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/wizard/appearance.py -rw-r--r-- root/root 11221 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/wizard/benchmark.py -rw-r--r-- root/root 15756 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/wizard/box.py -rw-r--r-- root/root 11799 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/wizard/charge.py -rw-r--r-- root/root 5412 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/wizard/cleanup.py -rw-r--r-- root/root 5323 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/wizard/command.py -rw-r--r-- root/root 18029 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/wizard/demo.py -rw-r--r-- root/root 9955 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/wizard/density.py -rw-r--r-- root/root 6385 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/wizard/distance.py -rw-r--r-- root/root 3383 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/wizard/dragging.py -rw-r--r-- root/root 13655 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/wizard/filter.py -rw-r--r-- root/root 2866 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/wizard/label.py -rw-r--r-- root/root 18849 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/wizard/measurement.py -rw-r--r-- root/root 930 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/wizard/message.py -rw-r--r-- root/root 29311 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/wizard/mutagenesis.py -rw-r--r-- root/root 14153 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/wizard/nucmutagenesis.py -rw-r--r-- root/root 4002 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/wizard/openvr.py -rw-r--r-- root/root 6316 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/wizard/pair_fit.py -rw-r--r-- root/root 1256 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/wizard/pseudoatom.py -rw-r--r-- root/root 1409 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/wizard/renaming.py -rw-r--r-- root/root 8146 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/wizard/sculpting.py -rw-r--r-- root/root 1913 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/wizard/security.py -rw-r--r-- root/root 15992 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/wizard/stereodemo.py -rw-r--r-- root/root 1147 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/wizard/toggle.py -rw-r--r-- root/root 6318 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/wizarding.py -rw-r--r-- root/root 170284 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/xray.py -rw-r--r-- root/root 589 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol/xwin.py drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/lib/python3/dist-packages/pymol2/ -rw-r--r-- root/root 3986 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol2/__init__.py -rw-r--r-- root/root 3811 2025-01-25 04:19 ./usr/lib/python3/dist-packages/pymol2/cmd2.py drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/lib/python3/dist-packages/web/ drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/lib/python3/dist-packages/web/examples/ -rw-r--r-- root/root 0 2025-01-25 04:19 ./usr/lib/python3/dist-packages/web/examples/__init__.py -rw-r--r-- root/root 7705 2025-01-25 04:19 ./usr/lib/python3/dist-packages/web/examples/justhttpd.py drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/share/ drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/share/doc/ drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/share/doc/python3-pymol/ -rw-r--r-- root/root 220 2026-04-03 19:17 ./usr/share/doc/python3-pymol/changelog.Debian.arm64.gz -rw-r--r-- root/root 951 2026-04-03 19:17 ./usr/share/doc/python3-pymol/changelog.Debian.gz -rw-r--r-- root/root 51567 2025-01-25 04:19 ./usr/share/doc/python3-pymol/changelog.gz -rw-r--r-- root/root 16883 2025-03-16 22:52 ./usr/share/doc/python3-pymol/copyright drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/share/lintian/ drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/share/lintian/overrides/ -rw-r--r-- root/root 476 2025-03-16 22:52 ./usr/share/lintian/overrides/python3-pymol +------------------------------------------------------------------------------+ | Post Build Thu, 09 Apr 2026 20:05:19 +0000 | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup Thu, 09 Apr 2026 20:05:19 +0000 | +------------------------------------------------------------------------------+ Purging /build/reproducible-path Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary Thu, 09 Apr 2026 20:05:22 +0000 | +------------------------------------------------------------------------------+ Build Architecture: arm64 Build Type: any Build-Space: 840892 Build-Time: 300 Distribution: unstable Host Architecture: arm64 Install-Time: 5 Job: /srv/rebuilderd/tmp/rebuilderdSyAapZ/inputs/pymol_3.1.0+dfsg-1.dsc Machine Architecture: arm64 Package: pymol Package-Time: 320 Source-Version: 3.1.0+dfsg-1 Space: 840892 Status: successful Version: 3.1.0+dfsg-1+b3 -------------------------------------------------------------------------------- Finished at 2026-04-09T20:05:13Z Build needed 00:05:20, 840892k disk space build artifacts stored in /srv/rebuilderd/tmp/rebuilderdSyAapZ/out checking python3-pymol-dbgsym_3.1.0+dfsg-1+b3_arm64.deb: size differs for python3-pymol-dbgsym_3.1.0+dfsg-1+b3_arm64.deb