=============================================================================== About this build: this rebuild has been done as part of reproduce.debian.net where we aim to reproduce Debian binary packages distributed via ftp.debian.org, by rebuilding using the exact same packages as the original build on the buildds, as described in the relevant .buildinfo file from buildinfos.debian.net. For more information please go to https://reproduce.debian.net or join #debian-reproducible on irc.debian.org =============================================================================== Preparing download of sources for /srv/rebuilderd/tmp/rebuilderdnlMl6s/inputs/pymol_3.1.0+dfsg-1+b3_arm64.buildinfo Source: pymol Version: 3.1.0+dfsg-1 rebuilderd-worker node: codethink02-arm64 +------------------------------------------------------------------------------+ | Downloading sources Mon, 13 Apr 2026 11:55:28 +0000 | +------------------------------------------------------------------------------+ Get:1 https://deb.debian.org/debian trixie InRelease [140 kB] Get:2 https://deb.debian.org/debian-security trixie-security InRelease [43.4 kB] Get:3 https://deb.debian.org/debian trixie-updates InRelease [47.3 kB] Get:4 https://deb.debian.org/debian trixie-proposed-updates InRelease [57.6 kB] Get:5 https://deb.debian.org/debian trixie-backports InRelease [54.0 kB] Get:6 https://deb.debian.org/debian forky InRelease [137 kB] Get:7 https://deb.debian.org/debian sid InRelease [187 kB] Get:8 https://deb.debian.org/debian experimental InRelease [91.7 kB] Get:9 https://deb.debian.org/debian trixie/non-free-firmware Sources [6552 B] Get:10 https://deb.debian.org/debian trixie/main Sources [10.5 MB] Get:11 https://deb.debian.org/debian-security trixie-security/non-free-firmware Sources [696 B] Get:12 https://deb.debian.org/debian-security trixie-security/main Sources [127 kB] Get:13 https://deb.debian.org/debian trixie-updates/main Sources [2788 B] Get:14 https://deb.debian.org/debian trixie-proposed-updates/main Sources [87.1 kB] Get:15 https://deb.debian.org/debian trixie-backports/non-free-firmware Sources [2984 B] Get:16 https://deb.debian.org/debian trixie-backports/main Sources [190 kB] Get:17 https://deb.debian.org/debian forky/main Sources [10.8 MB] Get:18 https://deb.debian.org/debian forky/non-free-firmware Sources [8300 B] Get:19 https://deb.debian.org/debian sid/main Sources [11.5 MB] Get:20 https://deb.debian.org/debian sid/non-free-firmware Sources [10.3 kB] Get:21 https://deb.debian.org/debian experimental/non-free-firmware Sources [2568 B] Get:22 https://deb.debian.org/debian experimental/main Sources [425 kB] Fetched 34.4 MB in 34s (1014 kB/s) Reading package lists... 'https://deb.debian.org/debian/pool/main/p/pymol/pymol_3.1.0%2bdfsg-1.dsc' pymol_3.1.0+dfsg-1.dsc 2307 SHA256:e18ec473635c3d0d9e19eeb1b36e75c703aa46cd72b36728364a2789e8112ed8 'https://deb.debian.org/debian/pool/main/p/pymol/pymol_3.1.0%2bdfsg.orig.tar.xz' pymol_3.1.0+dfsg.orig.tar.xz 21978280 SHA256:dcd6d304e6865a618cab1d053ea470f09abcd716c429248d84de59f947102b1d 'https://deb.debian.org/debian/pool/main/p/pymol/pymol_3.1.0%2bdfsg-1.debian.tar.xz' pymol_3.1.0+dfsg-1.debian.tar.xz 57900 SHA256:199a7e3227fba659093cda7cfdadca5ebc9dfd8233497d94bd9e30566bb1bb9a dcd6d304e6865a618cab1d053ea470f09abcd716c429248d84de59f947102b1d pymol_3.1.0+dfsg.orig.tar.xz 199a7e3227fba659093cda7cfdadca5ebc9dfd8233497d94bd9e30566bb1bb9a pymol_3.1.0+dfsg-1.debian.tar.xz e18ec473635c3d0d9e19eeb1b36e75c703aa46cd72b36728364a2789e8112ed8 pymol_3.1.0+dfsg-1.dsc +------------------------------------------------------------------------------+ | Calling debrebuild Mon, 13 Apr 2026 11:56:05 +0000 | +------------------------------------------------------------------------------+ Rebuilding pymol=3.1.0+dfsg-1 in /srv/rebuilderd/tmp/rebuilderdnlMl6s/inputs now. + nice /usr/bin/debrebuild --buildresult=/srv/rebuilderd/tmp/rebuilderdnlMl6s/out --builder=sbuild+unshare --cache=/srv/rebuilderd/cache -- /srv/rebuilderd/tmp/rebuilderdnlMl6s/inputs/pymol_3.1.0+dfsg-1+b3_arm64.buildinfo /srv/rebuilderd/tmp/rebuilderdnlMl6s/inputs/pymol_3.1.0+dfsg-1+b3_arm64.buildinfo contains a GPG signature which has NOT been validated Using defined Build-Path: /build/reproducible-path/pymol-3.1.0+dfsg I: verifying dsc... successful! Get:1 http://deb.debian.org/debian unstable InRelease [187 kB] Get:2 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable InRelease [187 kB] Get:3 http://deb.debian.org/debian unstable/main arm64 Packages [10.3 MB] Get:4 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 Packages [10.3 MB] Fetched 21.0 MB in 3s (7034 kB/s) Reading package lists... W: http://snapshot.debian.org/archive/debian/20260404T082424Z/dists/unstable/InRelease: Loading /etc/apt/trusted.gpg from deprecated option Dir::Etc::Trusted Get:1 http://deb.debian.org/debian unstable/main arm64 libgprofng0 arm64 2.46-3 [681 kB] Fetched 681 kB in 0s (61.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjmip8myu/libgprofng0_2.46-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-pkg-resources all 78.1.1-0.1 [224 kB] Fetched 224 kB in 0s (11.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb6x9rhyv/python3-pkg-resources_78.1.1-0.1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libexpat1-dev arm64 2.7.5-1 [152 kB] Fetched 152 kB in 0s (7884 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphe0dgzar/libexpat1-dev_2.7.5-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libctf-nobfd0 arm64 2.46-3 [155 kB] Fetched 155 kB in 0s (7462 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0axiagiz/libctf-nobfd0_2.46-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libhdf5-hl-cpp-310 arm64 1.14.6+repack-2 [20.0 kB] Fetched 20.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgkdddu93/libhdf5-hl-cpp-310_1.14.6+repack-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libavahi-common3 arm64 0.8-18 [43.4 kB] Fetched 43.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp34makusq/libavahi-common3_0.8-18_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 autotools-dev all 20240727.1 [60.2 kB] Fetched 60.2 kB in 0s (3246 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmm36p6k2/autotools-dev_20240727.1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgnutls-dane0t64 arm64 3.8.12-3 [473 kB] Fetched 473 kB in 0s (35.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnl74xfq9/libgnutls-dane0t64_3.8.12-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 diffutils arm64 1:3.12-1+b1 [398 kB] Fetched 398 kB in 0s (20.5 MB/s) dpkg-name: info: moved 'diffutils_1%3a3.12-1+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmpfwbjfa9o/diffutils_3.12-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-typing-extensions all 4.15.0-2 [92.5 kB] Fetched 92.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvhh4gip3/python3-typing-extensions_4.15.0-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-setuptools all 78.1.1-0.1 [738 kB] Fetched 738 kB in 0s (61.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu25xjf6m/python3-setuptools_78.1.1-0.1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libglut-dev arm64 3.4.0-6+b1 [164 kB] Fetched 164 kB in 0s (14.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt2r70ruf/libglut-dev_3.4.0-6+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libglx0 arm64 1.7.0-3 [31.5 kB] Fetched 31.5 kB in 0s (398 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxpub15hn/libglx0_1.7.0-3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 liblzma-dev arm64 5.8.2-2 [361 kB] Fetched 361 kB in 0s (4338 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqpy98f_m/liblzma-dev_5.8.2-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libffi8 arm64 3.5.2-4 [22.2 kB] Fetched 22.2 kB in 0s (1491 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppfwbwk8l/libffi8_3.5.2-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libqt5test5t64 arm64 5.15.17+dfsg-7+b1 [132 kB] Fetched 132 kB in 0s (8595 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4ahlscep/libqt5test5t64_5.15.17+dfsg-7+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libnghttp2-14 arm64 1.68.1-1 [68.1 kB] Fetched 68.1 kB in 0s (4670 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8fv3q9jl/libnghttp2-14_1.68.1-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libcairo2 arm64 1.18.4-3 [479 kB] Fetched 479 kB in 0s (23.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5tkucto5/libcairo2_1.18.4-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpotrace0 arm64 1.16-2+b3 [23.3 kB] Fetched 23.3 kB in 0s (1727 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp1l26l9q/libpotrace0_1.16-2+b3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg1-10 [19.8 kB] Fetched 19.8 kB in 0s (1248 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpetrr5z9m/libsasl2-modules-db_2.1.28+dfsg1-10_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libuv1t64 arm64 1.51.0-2+b1 [149 kB] Fetched 149 kB in 0s (13.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx4in5m10/libuv1t64_1.51.0-2+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgnutls28-dev arm64 3.8.12-3 [1428 kB] Fetched 1428 kB in 0s (56.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcpqyhrfr/libgnutls28-dev_3.8.12-3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 perl-base arm64 5.40.1-7 [1528 kB] Fetched 1528 kB in 0s (53.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkqmfeod5/perl-base_5.40.1-7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libglu1-mesa-dev arm64 9.0.2-1.1+b4 [203 kB] Fetched 203 kB in 0s (10.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4u2p8bom/libglu1-mesa-dev_9.0.2-1.1+b4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 g++-15 arm64 15.2.0-16 [27.1 kB] Fetched 27.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7lp5_0fr/g++-15_15.2.0-16_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgudev-1.0-0 arm64 238-7+b1 [14.3 kB] Fetched 14.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxptqftjh/libgudev-1.0-0_238-7+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 libsasl2-2 arm64 2.1.28+dfsg1-10 [55.0 kB] Fetched 55.0 kB in 0s (1327 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmjrg8x5_/libsasl2-2_2.1.28+dfsg1-10_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 libkrb5-3 arm64 1.22.1-2 [315 kB] Fetched 315 kB in 0s (19.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsb9wwviw/libkrb5-3_1.22.1-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb-randr0 arm64 1.17.0-2+b2 [116 kB] Fetched 116 kB in 0s (6385 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5rjuqu5u/libxcb-randr0_1.17.0-2+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libx11-xcb1 arm64 2:1.8.13-1 [250 kB] Fetched 250 kB in 0s (21.6 MB/s) dpkg-name: info: moved 'libx11-xcb1_2%3a1.8.13-1_arm64.deb' to '/srv/rebuilderd/tmp/tmp6ggpckkw/libx11-xcb1_1.8.13-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 libgssapi-krb5-2 arm64 1.22.1-2 [127 kB] Fetched 127 kB in 0s (7115 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplp5bq7zk/libgssapi-krb5-2_1.22.1-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libsm6 arm64 2:1.2.6-1+b1 [36.7 kB] Fetched 36.7 kB in 0s (2045 kB/s) dpkg-name: info: moved 'libsm6_2%3a1.2.6-1+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmpf39gm7oo/libsm6_1.2.6-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxaw7 arm64 2:1.0.16-1+b1 [195 kB] Fetched 195 kB in 0s (16.6 MB/s) dpkg-name: info: moved 'libxaw7_2%3a1.0.16-1+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmp173gnq4c/libxaw7_1.0.16-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 binutils-common arm64 2.46-3 [2632 kB] Fetched 2632 kB in 0s (54.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgw5koc5n/binutils-common_2.46-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgmp-dev arm64 2:6.3.0+dfsg-5+b1 [633 kB] Fetched 633 kB in 0s (8310 kB/s) dpkg-name: info: moved 'libgmp-dev_2%3a6.3.0+dfsg-5+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmprpiimg1t/libgmp-dev_6.3.0+dfsg-5+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libc-bin arm64 2.42-14 [530 kB] Fetched 530 kB in 0s (44.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5wx54ksa/libc-bin_2.42-14_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgraphite2-3 arm64 1.3.14-13 [69.2 kB] Fetched 69.2 kB in 0s (1970 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6g571q90/libgraphite2-3_1.3.14-13_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 libdb5.3t64 arm64 5.3.28+dfsg2-11 [626 kB] Fetched 626 kB in 0s (24.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpiea2akjh/libdb5.3t64_5.3.28+dfsg2-11_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libegl-mesa0 arm64 26.0.4-1 [116 kB] Fetched 116 kB in 0s (4037 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl6tdzptm/libegl-mesa0_26.0.4-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libice6 arm64 2:1.1.1-1+b1 [63.2 kB] Fetched 63.2 kB in 0s (0 B/s) dpkg-name: info: moved 'libice6_2%3a1.1.1-1+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmps1o0e5op/libice6_1.1.1-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgdbm6t64 arm64 1.26-1+b1 [77.1 kB] Fetched 77.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgwtzdtf4/libgdbm6t64_1.26-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libavahi-client3 arm64 0.8-18 [47.1 kB] Fetched 47.1 kB in 0s (4306 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsujr3xx5/libavahi-client3_0.8-18_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 openssl-provider-legacy arm64 3.6.1-3 [311 kB] Fetched 311 kB in 0s (13.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps2vppbg2/openssl-provider-legacy_3.6.1-3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 libselinux1 arm64 3.9-4+b1 [80.8 kB] Fetched 80.8 kB in 0s (6713 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxy7zifuh/libselinux1_3.9-4+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpam0g arm64 1.7.0-5+b1 [68.7 kB] Fetched 68.7 kB in 0s (4018 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfhgyp7g2/libpam0g_1.7.0-5+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libncursesw6 arm64 6.6+20251231-1 [125 kB] Fetched 125 kB in 0s (1810 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4z3whn4u/libncursesw6_6.6+20251231-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 dh-strip-nondeterminism all 1.15.0-1 [8812 B] Fetched 8812 B in 0s (608 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzy5pa669/dh-strip-nondeterminism_1.15.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libjpeg62-turbo-dev arm64 1:2.1.5-4 [293 kB] Fetched 293 kB in 0s (2725 kB/s) dpkg-name: info: moved 'libjpeg62-turbo-dev_1%3a2.1.5-4_arm64.deb' to '/srv/rebuilderd/tmp/tmpk_gfrxup/libjpeg62-turbo-dev_2.1.5-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 gcc arm64 4:15.2.0-5 [5160 B] Fetched 5160 B in 0s (0 B/s) dpkg-name: info: moved 'gcc_4%3a15.2.0-5_arm64.deb' to '/srv/rebuilderd/tmp/tmpcgwvnvpk/gcc_15.2.0-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 pkgconf-bin arm64 2.5.1-4 [35.1 kB] Fetched 35.1 kB in 0s (652 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpruad28n5/pkgconf-bin_2.5.1-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libssh2-1t64 arm64 1.11.1-2 [234 kB] Fetched 234 kB in 0s (13.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu03n1qki/libssh2-1t64_1.11.1-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb-sync1 arm64 1.17.0-2+b2 [109 kB] Fetched 109 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9jbcpt1r/libxcb-sync1_1.17.0-2+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libdrm-amdgpu1 arm64 2.4.131-1 [23.3 kB] Fetched 23.3 kB in 0s (1135 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgplmcfzp/libdrm-amdgpu1_2.4.131-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libbsd0 arm64 0.12.2-2+b1 [130 kB] Fetched 130 kB in 0s (8462 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt_bconv_/libbsd0_0.12.2-2+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libicu78 arm64 78.3-1 [9804 kB] Fetched 9804 kB in 0s (112 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzwsj4kmg/libicu78_78.3-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libaudit1 arm64 1:4.1.2-1+b1 [59.7 kB] Fetched 59.7 kB in 0s (3875 kB/s) dpkg-name: info: moved 'libaudit1_1%3a4.1.2-1+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmpiztccqe4/libaudit1_4.1.2-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb-render-util0 arm64 0.3.10-1+b1 [18.6 kB] Fetched 18.6 kB in 0s (1349 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzmicoy7b/libxcb-render-util0_0.3.10-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 binutils arm64 2.46-3 [279 kB] Fetched 279 kB in 0s (26.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgjxinm6o/binutils_2.46-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 g++ arm64 4:15.2.0-5 [1332 B] Fetched 1332 B in 0s (115 kB/s) dpkg-name: info: moved 'g++_4%3a15.2.0-5_arm64.deb' to '/srv/rebuilderd/tmp/tmpcuuv7e_2/g++_15.2.0-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libngtcp2-crypto-ossl0 arm64 1.21.0-1 [24.2 kB] Fetched 24.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptp23l_6_/libngtcp2-crypto-ossl0_1.21.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpython3.13 arm64 3.13.12-1 [2059 kB] Fetched 2059 kB in 0s (138 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfm6yban6/libpython3.13_3.13.12-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libqt5widgets5t64 arm64 5.15.17+dfsg-7+b1 [2260 kB] Fetched 2260 kB in 0s (136 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpeb60f9ia/libqt5widgets5t64_5.15.17+dfsg-7+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Fetched 12.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprdl2ms52/python3-jaraco.functools_4.1.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 xtrans-dev all 1.6.0-1 [93.5 kB] Fetched 93.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3eeswtru/xtrans-dev_1.6.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libdpkg-perl all 1.23.7 [669 kB] Fetched 669 kB in 0s (51.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbo8njdp9/libdpkg-perl_1.23.7_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libsensors5 arm64 1:3.6.2-2+b1 [36.8 kB] Fetched 36.8 kB in 0s (0 B/s) dpkg-name: info: moved 'libsensors5_1%3a3.6.2-2+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmp9bod9x85/libsensors5_3.6.2-2+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libisl23 arm64 0.27-2 [598 kB] Fetched 598 kB in 0s (54.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5zpdbqd0/libisl23_0.27-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libjpeg-dev arm64 1:2.1.5-4 [72.2 kB] Fetched 72.2 kB in 0s (0 B/s) dpkg-name: info: moved 'libjpeg-dev_1%3a2.1.5-4_arm64.deb' to '/srv/rebuilderd/tmp/tmphkw4i6vn/libjpeg-dev_2.1.5-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 dash arm64 0.5.12-12+b1 [95.6 kB] Fetched 95.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbtqwabqn/dash_0.5.12-12+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libqt5gui5t64 arm64 5.15.17+dfsg-7+b1 [3248 kB] Fetched 3248 kB in 0s (172 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8klg6cef/libqt5gui5t64_5.15.17+dfsg-7+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpython3-dev arm64 3.13.9-3 [10.8 kB] Fetched 10.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc1htbfv8/libpython3-dev_3.13.9-3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 libpython3.14-minimal arm64 3.14.3-5 [885 kB] Fetched 885 kB in 0s (68.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6eepdq0d/libpython3.14-minimal_3.14.3-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libmpfi0 arm64 1.5.4+ds-5 [34.7 kB] Fetched 34.7 kB in 0s (3333 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy_mbca51/libmpfi0_1.5.4+ds-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgl1-mesa-dri arm64 26.0.4-1 [42.6 kB] Fetched 42.6 kB in 0s (652 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp28jdbkzv/libgl1-mesa-dri_26.0.4-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 g++-aarch64-linux-gnu arm64 4:15.2.0-5 [1196 B] Fetched 1196 B in 0s (0 B/s) dpkg-name: info: moved 'g++-aarch64-linux-gnu_4%3a15.2.0-5_arm64.deb' to '/srv/rebuilderd/tmp/tmp9vpxj0v3/g++-aarch64-linux-gnu_15.2.0-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 ucf all 3.0053 [41.9 kB] Fetched 41.9 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp62wkczck/ucf_3.0053_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 gettext arm64 0.23.2-2 [1609 kB] Fetched 1609 kB in 0s (108 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph6p42472/gettext_0.23.2-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 perl arm64 5.40.1-7 [267 kB] Fetched 267 kB in 0s (22.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpq2dg241l/perl_5.40.1-7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Fetched 22.9 kB in 0s (2264 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpua_phiog/intltool-debian_0.35.0+20060710.6_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 po-debconf all 1.0.22 [216 kB] Fetched 216 kB in 0s (21.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl9y2xfvk/po-debconf_1.0.22_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libglx-dev arm64 1.7.0-3 [15.8 kB] Fetched 15.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpezz6mha3/libglx-dev_1.7.0-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libngtcp2-crypto-gnutls8 arm64 1.21.0-1 [22.2 kB] Fetched 22.2 kB in 0s (1293 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt6yq1aoa/libngtcp2-crypto-gnutls8_1.21.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 x11proto-dev all 2025.1-1 [605 kB] Fetched 605 kB in 0s (53.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0fzr0ho4/x11proto-dev_2025.1-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 automake all 1:1.18.1-4 [877 kB] Fetched 877 kB in 0s (44.3 MB/s) dpkg-name: info: moved 'automake_1%3a1.18.1-4_all.deb' to '/srv/rebuilderd/tmp/tmp01l6_ukl/automake_1.18.1-4_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 gcc-aarch64-linux-gnu arm64 4:15.2.0-5 [1432 B] Fetched 1432 B in 0s (26.2 kB/s) dpkg-name: info: moved 'gcc-aarch64-linux-gnu_4%3a15.2.0-5_arm64.deb' to '/srv/rebuilderd/tmp/tmp6j0a_i4h/gcc-aarch64-linux-gnu_15.2.0-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libqt5printsupport5t64 arm64 5.15.17+dfsg-7+b1 [191 kB] Fetched 191 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb9muiokv/libqt5printsupport5t64_5.15.17+dfsg-7+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 sensible-utils all 0.0.26 [27.0 kB] Fetched 27.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj7b1vgsx/sensible-utils_0.0.26_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libbrotli1 arm64 1.2.0-3 [295 kB] Fetched 295 kB in 0s (29.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr32xojru/libbrotli1_1.2.0-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb-dri3-0 arm64 1.17.0-2+b2 [107 kB] Fetched 107 kB in 0s (3056 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3723184c/libxcb-dri3-0_1.17.0-2+b2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-3+b1 [57.7 kB] Fetched 57.7 kB in 0s (560 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd5ud5_06/librtmp1_2.4+20151223.gitfa8646d.1-3+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libmagic-mgc arm64 1:5.46-5+b1 [338 kB] Fetched 338 kB in 0s (5952 kB/s) dpkg-name: info: moved 'libmagic-mgc_1%3a5.46-5+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmp8sjq1mm5/libmagic-mgc_5.46-5+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpcre2-8-0 arm64 10.46-1+b1 [260 kB] Fetched 260 kB in 0s (4937 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6s5u23qb/libpcre2-8-0_10.46-1+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 libk5crypto3 arm64 1.22.1-2 [77.1 kB] Fetched 77.1 kB in 0s (2714 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0psgc7z1/libk5crypto3_1.22.1-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 libkdb5-10t64 arm64 1.22.1-2 [41.8 kB] Fetched 41.8 kB in 0s (1752 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgkc_pppr/libkdb5-10t64_1.22.1-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 grep arm64 3.12-1+b1 [440 kB] Fetched 440 kB in 0s (5297 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy2rj6r07/grep_3.12-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libmd4c0 arm64 0.5.2-2+b2 [46.0 kB] Fetched 46.0 kB in 0s (985 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj0cugd_6/libmd4c0_0.5.2-2+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 texlive-base all 2025.20260124-1 [23.1 MB] Fetched 23.1 MB in 0s (192 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp03kwathp/texlive-base_2025.20260124-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libptexenc1 arm64 2025.20250727.75242+ds-5+b2 [50.3 kB] Fetched 50.3 kB in 0s (1165 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr0x7kpka/libptexenc1_2025.20250727.75242+ds-5+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libevdev2 arm64 1.13.6+dfsg-1 [30.7 kB] Fetched 30.7 kB in 0s (405 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo1wpt6jx/libevdev2_1.13.6+dfsg-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libtasn1-6-dev arm64 4.21.0-2 [97.3 kB] Fetched 97.3 kB in 0s (8779 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpaokbwtz7/libtasn1-6-dev_4.21.0-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 procps arm64 2:4.0.4-9+b1 [871 kB] Fetched 871 kB in 0s (46.6 MB/s) dpkg-name: info: moved 'procps_2%3a4.0.4-9+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmpgf3ne84x/procps_4.0.4-9+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libqt5xml5t64 arm64 5.15.17+dfsg-7+b1 [113 kB] Fetched 113 kB in 0s (6160 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptbqwowek/libqt5xml5t64_5.15.17+dfsg-7+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 krb5-multidev arm64 1.22.1-2 [127 kB] Fetched 127 kB in 0s (8439 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpq7d5bpzw/krb5-multidev_1.22.1-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 libperl5.40 arm64 5.40.1-7 [4134 kB] Fetched 4134 kB in 0s (170 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp08wj338/libperl5.40_5.40.1-7_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 libpng-dev arm64 1.6.56-1 [361 kB] Fetched 361 kB in 0s (22.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqss9y7dr/libpng-dev_1.6.56-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 hdf5-helpers arm64 1.14.6+repack-2 [22.1 kB] Fetched 22.1 kB in 0s (344 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc38g5qi5/hdf5-helpers_1.14.6+repack-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-pyqt5.sip arm64 12.17.2-1 [76.3 kB] Fetched 76.3 kB in 0s (5294 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv4e80__e/python3-pyqt5.sip_12.17.2-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libdebconfclient0 arm64 0.282+b2 [11.3 kB] Fetched 11.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpudo0zxsl/libdebconfclient0_0.282+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgcc-15-dev arm64 15.2.0-16 [2371 kB] Fetched 2371 kB in 0s (129 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdpshnd5t/libgcc-15-dev_15.2.0-16_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxml2-16 arm64 2.15.2+dfsg-0.1 [592 kB] Fetched 592 kB in 0s (51.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3ho7y3dk/libxml2-16_2.15.2+dfsg-0.1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 man-db arm64 2.13.1-1+b1 [1455 kB] Fetched 1455 kB in 0s (102 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppplrutc5/man-db_2.13.1-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libitm1 arm64 16-20260322-1 [24.2 kB] Fetched 24.2 kB in 0s (740 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3_rkxc8m/libitm1_16-20260322-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3 arm64 3.13.9-3 [27.6 kB] Fetched 27.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo8tz_s52/python3_3.13.9-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 media-types all 14.0.0 [30.8 kB] Fetched 30.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6nqi4mo4/media-types_14.0.0_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 python3.14-minimal arm64 3.14.3-5 [2243 kB] Fetched 2243 kB in 0s (20.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmposwq8b7k/python3.14-minimal_3.14.3-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libx11-dev arm64 2:1.8.13-1 [887 kB] Fetched 887 kB in 0s (29.6 MB/s) dpkg-name: info: moved 'libx11-dev_2%3a1.8.13-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpv0p0t0at/libx11-dev_1.8.13-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libice-dev arm64 2:1.1.1-1+b1 [73.6 kB] Fetched 73.6 kB in 0s (3758 kB/s) dpkg-name: info: moved 'libice-dev_2%3a1.1.1-1+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmpcw8segzv/libice-dev_1.1.1-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 g++-15-aarch64-linux-gnu arm64 15.2.0-16 [11.1 MB] Fetched 11.1 MB in 0s (110 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptu96ooxn/g++-15-aarch64-linux-gnu_15.2.0-16_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libopengl0 arm64 1.7.0-3 [32.0 kB] Fetched 32.0 kB in 0s (1520 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcfhxderz/libopengl0_1.7.0-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libjpeg62-turbo arm64 1:2.1.5-4 [173 kB] Fetched 173 kB in 0s (12.4 MB/s) dpkg-name: info: moved 'libjpeg62-turbo_1%3a2.1.5-4_arm64.deb' to '/srv/rebuilderd/tmp/tmpl8si5mq0/libjpeg62-turbo_2.1.5-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgnutls30t64 arm64 3.8.12-3 [1409 kB] Fetched 1409 kB in 0s (78.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4t1ogsie/libgnutls30t64_3.8.12-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb-xfixes0 arm64 1.17.0-2+b2 [109 kB] Fetched 109 kB in 0s (7467 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphbejlkiv/libxcb-xfixes0_1.17.0-2+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3.13-dev arm64 3.13.12-1 [504 kB] Fetched 504 kB in 0s (31.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps_yakplt/python3.13-dev_3.13.12-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 fonts-lmodern all 2.005-1 [4540 kB] Fetched 4540 kB in 0s (47.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7o14m8bw/fonts-lmodern_2.005-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxext6 arm64 2:1.3.4-1+b4 [49.0 kB] Fetched 49.0 kB in 0s (3029 kB/s) dpkg-name: info: moved 'libxext6_2%3a1.3.4-1+b4_arm64.deb' to '/srv/rebuilderd/tmp/tmppy2k9_wd/libxext6_1.3.4-1+b4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 gcc-15-base arm64 15.2.0-16 [36.3 kB] Fetched 36.3 kB in 0s (2448 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7q0hy_kl/gcc-15-base_15.2.0-16_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libqt5network5t64 arm64 5.15.17+dfsg-7+b1 [641 kB] Fetched 641 kB in 0s (25.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcjj5dxnw/libqt5network5t64_5.15.17+dfsg-7+b1_arm64.deb' Downloading dependency 1 of 426: libgprofng0:arm64=2.46-3 Downloading dependency 2 of 426: python3-pkg-resources:arm64=78.1.1-0.1 Downloading dependency 3 of 426: libexpat1-dev:arm64=2.7.5-1 Downloading dependency 4 of 426: libctf-nobfd0:arm64=2.46-3 Downloading dependency 5 of 426: libhdf5-hl-cpp-310:arm64=1.14.6+repack-2 Downloading dependency 6 of 426: libavahi-common3:arm64=0.8-18 Downloading dependency 7 of 426: autotools-dev:arm64=20240727.1 Downloading dependency 8 of 426: libgnutls-dane0t64:arm64=3.8.12-3 Downloading dependency 9 of 426: diffutils:arm64=1:3.12-1+b1 Downloading dependency 10 of 426: python3-typing-extensions:arm64=4.15.0-2 Downloading dependency 11 of 426: python3-setuptools:arm64=78.1.1-0.1 Downloading dependency 12 of 426: 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librtmp1:arm64=2.4+20151223.gitfa8646d.1-3+b1 Downloading dependency 91 of 426: libmagic-mgc:arm64=1:5.46-5+b1 Downloading dependency 92 of 426: libpcre2-8-0:arm64=10.46-1+b1 Downloading dependency 93 of 426: libk5crypto3:arm64=1.22.1-2 Downloading dependency 94 of 426: libkdb5-10t64:arm64=1.22.1-2 Downloading dependency 95 of 426: grep:arm64=3.12-1+b1 Downloading dependency 96 of 426: libmd4c0:arm64=0.5.2-2+b2 Downloading dependency 97 of 426: texlive-base:arm64=2025.20260124-1 Downloading dependency 98 of 426: libptexenc1:arm64=2025.20250727.75242+ds-5+b2 Downloading dependency 99 of 426: libevdev2:arm64=1.13.6+dfsg-1 Downloading dependency 100 of 426: libtasn1-6-dev:arm64=4.21.0-2 Downloading dependency 101 of 426: procps:arm64=2:4.0.4-9+b1 Downloading dependency 102 of 426: libqt5xml5t64:arm64=5.15.17+dfsg-7+b1 Downloading dependency 103 of 426: krb5-multidev:arm64=1.22.1-2 Downloading dependency 104 of 426: libperl5.40:arm64=5.40.1-7 Downloading dependency 105 of 426: libpng-dev:arm64=1.6.56-1 Downloading dependency 106 of 426: hdf5-helpers:arm64=1.14.6+repack-2 Downloading dependency 107 of 426: python3-pyqt5.sip:arm64=12.17.2-1 Downloading dependency 108 of 426: libdebconfclient0:arm64=0.282+b2 Downloading dependency 109 of 426: libgcc-15-dev:arm64=15.2.0-16 Downloading dependency 110 of 426: libxml2-16:arm64=2.15.2+dfsg-0.1 Downloading dependency 111 of 426: man-db:arm64=2.13.1-1+b1 Downloading dependency 112 of 426: libitm1:arm64=16-20260322-1 Downloading dependency 113 of 426: python3:arm64=3.13.9-3 Downloading dependency 114 of 426: media-types:arm64=14.0.0 Downloading dependency 115 of 426: python3.14-minimal:arm64=3.14.3-5 Downloading dependency 116 of 426: libx11-dev:arm64=2:1.8.13-1 Downloading dependency 117 of 426: libice-dev:arm64=2:1.1.1-1+b1 Downloading dependency 118 of 426: g++-15-aarch64-linux-gnu:arm64=15.2.0-16 Downloading dependency 119 of 426: libopengl0:arm64=1.7.0-3 Downloading dependency 120 of 426: libjpeg62-turbo:arm64=1:2.1.5-4 Downloading dependency 121 of 426: libgnutls30t64:arm64=3.8.12-3 Downloading dependency 122 of 426: libxcb-xfixes0:arm64=1.17.0-2+b2 Downloading dependency 123 of 426: python3.13-dev:arm64=3.13.12-1 Downloading dependency 124 of 426: fonts-lmodern:arm64=2.005-1 Downloading dependency 125 of 426: libxext6:arm64=2:1.3.4-1+b4 Downloading dependency 126 of 426: gcc-15-base:arm64=15.2.0-16 Downloading dependency 127 of 426: libqt5network5t64:arm64=5.15.17+dfsg-7+b1 Downloading dependency 128 of 426: libmpfr6:arm64=4.2.2-3Get:1 http://deb.debian.org/debian unstable/main arm64 libmpfr6 arm64 4.2.2-3 [691 kB] Fetched 691 kB in 0s (30.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8rfjkqtv/libmpfr6_4.2.2-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 tar arm64 1.35+dfsg-4 [802 kB] Fetched 802 kB in 0s (32.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmbj2o5h6/tar_1.35+dfsg-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 shared-mime-info arm64 2.4-5+b4 [754 kB] Fetched 754 kB in 0s (50.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt3ouwqc5/shared-mime-info_2.4-5+b4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 gzip arm64 1.13-1+b1 [135 kB] Fetched 135 kB in 0s (7609 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu7_prhas/gzip_1.13-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 zlib1g arm64 1:1.3.dfsg+really1.3.2-3 [87.9 kB] Fetched 87.9 kB in 0s (7858 kB/s) dpkg-name: info: moved 'zlib1g_1%3a1.3.dfsg+really1.3.2-3_arm64.deb' to '/srv/rebuilderd/tmp/tmpzccl6p8g/zlib1g_1.3.dfsg+really1.3.2-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 tzdata all 2026a-3 [260 kB] Fetched 260 kB in 0s (16.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp71qyi8zf/tzdata_2026a-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-zipp all 3.23.0-1 [11.0 kB] Fetched 11.0 kB in 0s (578 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptqm4_abz/python3-zipp_3.23.0-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 python3.14 arm64 3.14.3-5 [830 kB] Fetched 830 kB in 0s (32.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprr8j86yp/python3.14_3.14.3-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgbm1 arm64 26.0.4-1 [46.2 kB] Fetched 46.2 kB in 0s (3030 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1056du0_/libgbm1_26.0.4-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 freeglut3-dev arm64 3.4.0-6+b1 [53.9 kB] Fetched 53.9 kB in 0s (3619 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsh6lc890/freeglut3-dev_3.4.0-6+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 cpp-aarch64-linux-gnu arm64 4:15.2.0-5 [5320 B] Fetched 5320 B in 0s (430 kB/s) dpkg-name: info: moved 'cpp-aarch64-linux-gnu_4%3a15.2.0-5_arm64.deb' to '/srv/rebuilderd/tmp/tmpnq8jf59f/cpp-aarch64-linux-gnu_15.2.0-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libmd0 arm64 1.1.0-2+b2 [32.1 kB] Fetched 32.1 kB in 0s (2083 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8l50lm1r/libmd0_1.1.0-2+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libqt5dbus5t64 arm64 5.15.17+dfsg-7+b1 [196 kB] Fetched 196 kB in 0s (10.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy3g4p0yr/libqt5dbus5t64_5.15.17+dfsg-7+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 fonts-dejavu-mono all 2.37-8 [489 kB] Fetched 489 kB in 0s (25.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp56pofsty/fonts-dejavu-mono_2.37-8_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libsz2 arm64 1.1.6-1 [17.7 kB] Fetched 17.7 kB in 0s (808 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsuip8_kr/libsz2_1.1.6-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libtinfo6 arm64 6.6+20251231-1 [346 kB] Fetched 346 kB in 0s (25.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpshe63tph/libtinfo6_6.6+20251231-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb-image0 arm64 0.4.0-2+b3 [21.8 kB] Fetched 21.8 kB in 0s (1149 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2ld4nvqx/libxcb-image0_0.4.0-2+b3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-typeguard all 4.4.4-2 [37.2 kB] Fetched 37.2 kB in 0s (2204 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb2zveup6/python3-typeguard_4.4.4-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgfortran5 arm64 16-20260322-1 [371 kB] Fetched 371 kB in 0s (22.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz8duawon/libgfortran5_16-20260322-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libhdf5-fortran-310 arm64 1.14.6+repack-2 [102 kB] Fetched 102 kB in 0s (9693 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprfsoodiy/libhdf5-fortran-310_1.14.6+repack-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 liblsan0 arm64 16-20260322-1 [1213 kB] Fetched 1213 kB in 0s (51.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc7fahjl3/liblsan0_16-20260322-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgmp10 arm64 2:6.3.0+dfsg-5+b1 [544 kB] Fetched 544 kB in 0s (45.5 MB/s) dpkg-name: info: moved 'libgmp10_2%3a6.3.0+dfsg-5+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmp9v6qv053/libgmp10_6.3.0+dfsg-5+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 xz-utils arm64 5.8.2-2 [703 kB] Fetched 703 kB in 0s (55.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmj487a_6/xz-utils_5.8.2-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-numpy-dev arm64 1:2.3.5+ds-3 [135 kB] Fetched 135 kB in 0s (10000 kB/s) dpkg-name: info: moved 'python3-numpy-dev_1%3a2.3.5+ds-3_arm64.deb' to '/srv/rebuilderd/tmp/tmp4jhvz4d7/python3-numpy-dev_2.3.5+ds-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libglu1-mesa arm64 9.0.2-1.1+b4 [162 kB] Fetched 162 kB in 0s (8848 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy1ljh6rb/libglu1-mesa_9.0.2-1.1+b4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-dev arm64 3.13.9-3 [26.0 kB] Fetched 26.0 kB in 0s (1604 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpobke8ofn/python3-dev_3.13.9-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libbinutils arm64 2.46-3 [687 kB] Fetched 687 kB in 0s (32.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpanf40slt/libbinutils_2.46-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 mawk arm64 1.3.4.20260302-1 [134 kB] Fetched 134 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplz1we9tl/mawk_1.3.4.20260302-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 libinput10 arm64 1.31.0-1 [142 kB] Fetched 142 kB in 0s (2627 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp318upy5e/libinput10_1.31.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpcre2-16-0 arm64 10.46-1+b1 [246 kB] Fetched 246 kB in 0s (4999 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpogq2hr76/libpcre2-16-0_10.46-1+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 liblz4-1 arm64 1.10.0-8 [66.4 kB] Fetched 66.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpugj03m8g/liblz4-1_1.10.0-8_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 nettle-dev arm64 3.10.2-1 [1319 kB] Fetched 1319 kB in 0s (48.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpforg_ywa/nettle-dev_3.10.2-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 texlive-latex-base all 2025.20260124-1 [1340 kB] Fetched 1340 kB in 0s (64.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx93eaglb/texlive-latex-base_2025.20260124-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libaec-dev arm64 1.1.6-1 [24.2 kB] Fetched 24.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp76x7kela/libaec-dev_1.1.6-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libmtdev1t64 arm64 1.1.7-1+b1 [22.9 kB] Fetched 22.9 kB in 0s (1567 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpg_te1tr8/libmtdev1t64_1.1.7-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb-xkb1 arm64 1.17.0-2+b2 [128 kB] Fetched 128 kB in 0s (10.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn5wbg6gb/libxcb-xkb1_1.17.0-2+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libp11-kit-dev arm64 0.26.2-2 [223 kB] Fetched 223 kB in 0s (12.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0j5tgi0l/libp11-kit-dev_0.26.2-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxxf86vm1 arm64 1:1.1.4-2 [19.5 kB] Fetched 19.5 kB in 0s (1116 kB/s) dpkg-name: info: moved 'libxxf86vm1_1%3a1.1.4-2_arm64.deb' to '/srv/rebuilderd/tmp/tmpuwgutykn/libxxf86vm1_1.1.4-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 tex-common all 6.20 [29.7 kB] Fetched 29.7 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_fgvoeqs/tex-common_6.20_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 libcrypt1 arm64 1:4.5.1-1 [93.9 kB] Fetched 93.9 kB in 0s (6598 kB/s) dpkg-name: info: moved 'libcrypt1_1%3a4.5.1-1_arm64.deb' to '/srv/rebuilderd/tmp/tmp0dtwz2a9/libcrypt1_4.5.1-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libhdf5-dev arm64 1.14.6+repack-2 [3143 kB] Fetched 3143 kB in 0s (75.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd57lsuo7/libhdf5-dev_1.14.6+repack-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 libpython3.14-dev arm64 3.14.3-5 [5231 kB] Fetched 5231 kB in 0s (118 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqdfdktcj/libpython3.14-dev_3.14.3-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb-xinerama0 arm64 1.17.0-2+b2 [105 kB] Fetched 105 kB in 0s (6159 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfg1gwxwf/libxcb-xinerama0_1.17.0-2+b2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 libglew2.3 arm64 2.3.1-3 [158 kB] Fetched 158 kB in 0s (15.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo9bwz66n/libglew2.3_2.3.1-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libharfbuzz0b arm64 12.3.2-2+b2 [471 kB] Fetched 471 kB in 0s (28.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5on4gpf8/libharfbuzz0b_12.3.2-2+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxdmcp6 arm64 1:1.1.5-2 [27.9 kB] Fetched 27.9 kB in 0s (1784 kB/s) dpkg-name: info: moved 'libxdmcp6_1%3a1.1.5-2_arm64.deb' to '/srv/rebuilderd/tmp/tmpkv1q9b3z/libxdmcp6_1.1.5-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 gcc-15 arm64 15.2.0-16 [529 kB] Fetched 529 kB in 0s (27.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp58gyqf28/gcc-15_15.2.0-16_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libattr1 arm64 1:2.5.2-4 [22.7 kB] Fetched 22.7 kB in 0s (0 B/s) dpkg-name: info: moved 'libattr1_1%3a2.5.2-4_arm64.deb' to '/srv/rebuilderd/tmp/tmpglr78otc/libattr1_2.5.2-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libudev1 arm64 260.1-1 [123 kB] Fetched 123 kB in 0s (6530 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpq44obdkt/libudev1_260.1-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libmpc3 arm64 1.3.1-3 [49.3 kB] Fetched 49.3 kB in 0s (3314 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkwn6dkau/libmpc3_1.3.1-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 t1utils arm64 1.41-4+b2 [57.5 kB] Fetched 57.5 kB in 0s (4744 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpplfrlhol/t1utils_1.41-4+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 base-files arm64 14 [72.9 kB] Fetched 72.9 kB in 0s (4078 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0cl_zeye/base-files_14_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libqt5core5t64 arm64 5.15.17+dfsg-7+b1 [1805 kB] Fetched 1805 kB in 0s (57.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo5ofcxph/libqt5core5t64_5.15.17+dfsg-7+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpixman-1-0 arm64 0.46.4-1+b1 [174 kB] Fetched 174 kB in 0s (11.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpluslzfzx/libpixman-1-0_0.46.4-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3.13-minimal arm64 3.13.12-1 [2070 kB] Fetched 2070 kB in 0s (114 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv1t4azjz/python3.13-minimal_3.13.12-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 libpython3.14-stdlib arm64 3.14.3-5 [2180 kB] Fetched 2180 kB in 0s (49.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxnw0w1zh/libpython3.14-stdlib_3.14.3-5_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 python3.14-dev arm64 3.14.3-5 [507 kB] Fetched 507 kB in 0s (34.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz9k9_oar/python3.14-dev_3.14.3-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 readline-common all 8.3-4 [74.8 kB] Fetched 74.8 kB in 0s (5077 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2ggvdpe1/readline-common_8.3-4_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 make arm64 4.4.1-3+b1 [454 kB] Fetched 454 kB in 0s (22.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0tt9igqs/make_4.4.1-3+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-numpy arm64 1:2.3.5+ds-3 [4184 kB] Fetched 4184 kB in 0s (70.2 MB/s) dpkg-name: info: moved 'python3-numpy_1%3a2.3.5+ds-3_arm64.deb' to '/srv/rebuilderd/tmp/tmpmd5d2cng/python3-numpy_2.3.5+ds-3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 libcups2t64 arm64 2.4.16-1 [235 kB] Fetched 235 kB in 0s (11.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl7ev6ykw/libcups2t64_2.4.16-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 bzip2 arm64 1.0.8-6+b1 [39.7 kB] Fetched 39.7 kB in 0s (2154 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj86gs93f/bzip2_1.0.8-6+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpython3-stdlib arm64 3.13.9-3 [10.5 kB] Fetched 10.5 kB in 0s (722 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp94v3sdq1/libpython3-stdlib_3.13.9-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libblas3 arm64 3.12.1-7+b1 [132 kB] Fetched 132 kB in 0s (7445 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp00l356z8/libblas3_3.12.1-7+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 patch arm64 2.8-2+b1 [128 kB] Fetched 128 kB in 0s (7255 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyzoul8f6/patch_2.8-2+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 dwz arm64 0.16-4 [99.2 kB] Fetched 99.2 kB in 0s (5650 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpi6wvwqqp/dwz_0.16-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-pyqt5.qtopengl arm64 5.15.11+dfsg-3 [198 kB] Fetched 198 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp35rudc_5/python3-pyqt5.qtopengl_5.15.11+dfsg-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libjs-sphinxdoc all 8.2.3-12 [27.9 kB] Fetched 27.9 kB in 0s (1747 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplyhfy9sj/libjs-sphinxdoc_8.2.3-12_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 libunbound8 arm64 1.24.2-1 [561 kB] Fetched 561 kB in 0s (35.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_x0dojf8/libunbound8_1.24.2-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libc-dev-bin arm64 2.42-14 [36.4 kB] Fetched 36.4 kB in 0s (780 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpw3xw6war/libc-dev-bin_2.42-14_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libdbus-1-3 arm64 1.16.2-4 [170 kB] Fetched 170 kB in 0s (9572 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd2vyonyb/libdbus-1-3_1.16.2-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libsm-dev arm64 2:1.2.6-1+b1 [40.4 kB] Fetched 40.4 kB in 0s (2754 kB/s) dpkg-name: info: moved 'libsm-dev_2%3a1.2.6-1+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmpz0l1yptl/libsm-dev_1.2.6-1+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 libkadm5clnt-mit12 arm64 1.22.1-2 [40.7 kB] Fetched 40.7 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpelxgdb_y/libkadm5clnt-mit12_1.22.1-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 liblapack3 arm64 3.12.1-7+b1 [1815 kB] Fetched 1815 kB in 0s (81.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7ko4i6rv/liblapack3_3.12.1-7+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libhdf5-cpp-310 arm64 1.14.6+repack-2 [117 kB] Fetched 117 kB in 0s (7749 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsd19d0h4/libhdf5-cpp-310_1.14.6+repack-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 gcc-15-aarch64-linux-gnu arm64 15.2.0-16 [19.6 MB] Fetched 19.6 MB in 0s (250 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqb53luf6/gcc-15-aarch64-linux-gnu_15.2.0-16_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libhdf5-hl-fortran-310 arm64 1.14.6+repack-2 [37.4 kB] Fetched 37.4 kB in 0s (704 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp24_yfahv/libhdf5-hl-fortran-310_1.14.6+repack-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 libssl3t64 arm64 3.6.1-3 [2765 kB] Fetched 2765 kB in 0s (121 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprftgg05w/libssl3t64_3.6.1-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 build-essential arm64 12.12 [4624 B] Fetched 4624 B in 0s (344 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpaf7y5dmv/build-essential_12.12_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libdebhelper-perl all 13.31 [75.7 kB] Fetched 75.7 kB in 0s (5951 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpabf9daso/libdebhelper-perl_13.31_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 linux-libc-dev all 6.19.10-1 [1963 kB] Fetched 1963 kB in 0s (117 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9ympxb3a/linux-libc-dev_6.19.10-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libdouble-conversion3 arm64 3.4.0-1 [37.7 kB] Fetched 37.7 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph3k9fteg/libdouble-conversion3_3.4.0-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 libgssrpc4t64 arm64 1.22.1-2 [56.5 kB] Fetched 56.5 kB in 0s (3316 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0kok6y1z/libgssrpc4t64_1.22.1-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libkeyutils1 arm64 1.6.3-6+b1 [9852 B] Fetched 9852 B in 0s (664 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8p14dzbs/libkeyutils1_1.6.3-6+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libwayland-client0 arm64 1.24.0-2+b2 [27.3 kB] Fetched 27.3 kB in 0s (1529 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpaz7mxbch/libwayland-client0_1.24.0-2+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libatomic1 arm64 16-20260322-1 [9832 B] Fetched 9832 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp10pbsojr/libatomic1_16-20260322-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgl-dev arm64 1.7.0-3 [101 kB] Fetched 101 kB in 0s (6788 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoozr3i8i/libgl-dev_1.7.0-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libx11-6 arm64 2:1.8.13-1 [799 kB] Fetched 799 kB in 0s (38.5 MB/s) dpkg-name: info: moved 'libx11-6_2%3a1.8.13-1_arm64.deb' to '/srv/rebuilderd/tmp/tmps0d2nk46/libx11-6_1.8.13-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libmagic1t64 arm64 1:5.46-5+b1 [103 kB] Fetched 103 kB in 0s (5727 kB/s) dpkg-name: info: moved 'libmagic1t64_1%3a5.46-5+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmpydz54wsl/libmagic1t64_5.46-5+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 xkb-data all 2.47-1 [835 kB] Fetched 835 kB in 0s (36.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl52usxpo/xkb-data_2.47-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libglib2.0-0t64 arm64 2.88.0-1 [1426 kB] Fetched 1426 kB in 0s (44.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp12n7kowk/libglib2.0-0t64_2.88.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-all-dev arm64 3.13.9-3 [1068 B] Fetched 1068 B in 0s (86.2 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp29g84irn/python3-all-dev_3.13.9-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 fontconfig arm64 2.17.1-5 [191 kB] Fetched 191 kB in 0s (3785 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnkebfmnt/fontconfig_2.17.1-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 hostname arm64 3.25+b1 [11.2 kB] Fetched 11.2 kB in 0s (670 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyf2og2rv/hostname_3.25+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 base-passwd arm64 3.6.8+b1 [54.3 kB] Fetched 54.3 kB in 0s (3013 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpeowpncxb/base-passwd_3.6.8+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libarchive13t64 arm64 3.8.5-1 [329 kB] Fetched 329 kB in 0s (20.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyysvyrpy/libarchive13t64_3.8.5-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libtext-charwidth-perl arm64 0.04-11+b5 [9644 B] Fetched 9644 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4pdlwnt1/libtext-charwidth-perl_0.04-11+b5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxpm4 arm64 1:3.5.17-1+b4 [52.9 kB] Fetched 52.9 kB in 0s (0 B/s) dpkg-name: info: moved 'libxpm4_1%3a3.5.17-1+b4_arm64.deb' to '/srv/rebuilderd/tmp/tmp598nrc3k/libxpm4_3.5.17-1+b4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libngtcp2-16 arm64 1.21.0-1 [122 kB] Fetched 122 kB in 0s (7090 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl9zc8nzs/libngtcp2-16_1.21.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libglm-dev all 1.0.1+ds-3 [196 kB] Fetched 196 kB in 0s (16.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp51lp6o83/libglm-dev_1.0.1+ds-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libtasn1-6 arm64 4.21.0-2 [48.0 kB] Fetched 48.0 kB in 0s (2818 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwrd7qxm9/libtasn1-6_4.21.0-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 libssl-dev arm64 3.6.1-3 [3412 kB] Fetched 3412 kB in 0s (113 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpev86ilwi/libssl-dev_3.6.1-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libstdc++6 arm64 16-20260322-1 [653 kB] Fetched 653 kB in 0s (27.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbatq6o_h/libstdc++6_16-20260322-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb1-dev arm64 1.17.0-2+b2 [182 kB] Fetched 182 kB in 0s (16.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpa0k99tzs/libxcb1-dev_1.17.0-2+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxkbcommon0 arm64 1.13.1-1 [136 kB] Fetched 136 kB in 0s (2579 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdvwqnmm3/libxkbcommon0_1.13.1-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3.13 arm64 3.13.12-1 [776 kB] Fetched 776 kB in 0s (70.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptmic33cp/python3.13_3.13.12-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libnghttp3-9 arm64 1.15.0-1 [61.9 kB] Fetched 61.9 kB in 0s (3728 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpacyl40mu/libnghttp3-9_1.15.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libdrm-common all 2.4.131-1 [9168 B] Fetched 9168 B in 0s (583 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzvf8p5ez/libdrm-common_2.4.131-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 libmount1 arm64 2.42-1 [198 kB] Fetched 198 kB in 0s (10.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr625zx6t/libmount1_2.42-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb-icccm4 arm64 0.4.2-1+b1 [27.4 kB] Fetched 27.4 kB in 0s (2264 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph5azpt1a/libxcb-icccm4_0.4.2-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libqt5help5 arm64 5.15.17-4+b1 [145 kB] Fetched 145 kB in 0s (7742 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7m0_0uup/libqt5help5_5.15.17-4+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libglx-mesa0 arm64 26.0.4-1 [109 kB] Fetched 109 kB in 0s (6167 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkwax06lf/libglx-mesa0_26.0.4-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libasan8 arm64 16-20260322-1 [2673 kB] Fetched 2673 kB in 0s (119 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmmi4fzsm/libasan8_16-20260322-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 libuuid1 arm64 2.42-1 [31.9 kB] Fetched 31.9 kB in 0s (2185 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb5yljv1s/libuuid1_2.42-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxau6 arm64 1:1.0.11-1+b1 [20.8 kB] Fetched 20.8 kB in 0s (1398 kB/s) dpkg-name: info: moved 'libxau6_1%3a1.0.11-1+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmplihxnxyu/libxau6_1.0.11-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 debhelper all 13.31 [932 kB] Fetched 932 kB in 0s (38.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8r4gs0jg/debhelper_13.31_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Fetched 104 kB in 0s (5685 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnti0y5xt/libarchive-zip-perl_1.68-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb-util1 arm64 0.4.1-1+b1 [23.7 kB] Fetched 23.7 kB in 0s (1423 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzahmcwac/libxcb-util1_0.4.1-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libidn2-dev arm64 2.3.8-4+b1 [102 kB] Fetched 102 kB in 0s (5933 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuhz__cuz/libidn2-dev_2.3.8-4+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libuchardet0 arm64 0.0.8-2+b1 [69.1 kB] Fetched 69.1 kB in 0s (3931 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8xgp0ekr/libuchardet0_0.0.8-2+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 fontconfig-config arm64 2.17.1-5 [56.1 kB] Fetched 56.1 kB in 0s (3609 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd5rkc28f/fontconfig-config_2.17.1-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 ncurses-bin arm64 6.6+20251231-1 [438 kB] Fetched 438 kB in 0s (20.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4ujss_he/ncurses-bin_6.6+20251231-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libunistring5 arm64 1.4.2-1 [455 kB] Fetched 455 kB in 0s (38.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnjbm87zf/libunistring5_1.4.2-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libldap-dev arm64 2.6.10+dfsg-1+b1 [305 kB] Fetched 305 kB in 0s (17.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz2r_x5u3/libldap-dev_2.6.10+dfsg-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 findutils arm64 4.10.0-3+b1 [695 kB] Fetched 695 kB in 0s (47.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvtc7erux/findutils_4.10.0-3+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libacl1 arm64 2.3.2-3 [31.8 kB] Fetched 31.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp_w8nlp8/libacl1_2.3.2-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libglvnd0 arm64 1.7.0-3 [41.5 kB] Fetched 41.5 kB in 0s (2400 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdbk644s1/libglvnd0_1.7.0-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libc6-dev arm64 2.42-14 [1617 kB] Fetched 1617 kB in 0s (82.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpby2za2wq/libc6-dev_2.42-14_arm64.deb' Downloading dependency 129 of 426: tar:arm64=1.35+dfsg-4 Downloading dependency 130 of 426: shared-mime-info:arm64=2.4-5+b4 Downloading dependency 131 of 426: gzip:arm64=1.13-1+b1 Downloading dependency 132 of 426: zlib1g:arm64=1:1.3.dfsg+really1.3.2-3 Downloading dependency 133 of 426: tzdata:arm64=2026a-3 Downloading dependency 134 of 426: python3-zipp:arm64=3.23.0-1 Downloading dependency 135 of 426: python3.14:arm64=3.14.3-5 Downloading dependency 136 of 426: 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dependency 198 of 426: libdbus-1-3:arm64=1.16.2-4 Downloading dependency 199 of 426: libsm-dev:arm64=2:1.2.6-1+b1 Downloading dependency 200 of 426: libkadm5clnt-mit12:arm64=1.22.1-2 Downloading dependency 201 of 426: liblapack3:arm64=3.12.1-7+b1 Downloading dependency 202 of 426: libhdf5-cpp-310:arm64=1.14.6+repack-2 Downloading dependency 203 of 426: gcc-15-aarch64-linux-gnu:arm64=15.2.0-16 Downloading dependency 204 of 426: libhdf5-hl-fortran-310:arm64=1.14.6+repack-2 Downloading dependency 205 of 426: libssl3t64:arm64=3.6.1-3 Downloading dependency 206 of 426: build-essential:arm64=12.12 Downloading dependency 207 of 426: libdebhelper-perl:arm64=13.31 Downloading dependency 208 of 426: linux-libc-dev:arm64=6.19.10-1 Downloading dependency 209 of 426: libdouble-conversion3:arm64=3.4.0-1 Downloading dependency 210 of 426: libgssrpc4t64:arm64=1.22.1-2 Downloading dependency 211 of 426: libkeyutils1:arm64=1.6.3-6+b1 Downloading dependency 212 of 426: libwayland-client0:arm64=1.24.0-2+b2 Downloading dependency 213 of 426: libatomic1:arm64=16-20260322-1 Downloading dependency 214 of 426: libgl-dev:arm64=1.7.0-3 Downloading dependency 215 of 426: libx11-6:arm64=2:1.8.13-1 Downloading dependency 216 of 426: libmagic1t64:arm64=1:5.46-5+b1 Downloading dependency 217 of 426: xkb-data:arm64=2.47-1 Downloading dependency 218 of 426: libglib2.0-0t64:arm64=2.88.0-1 Downloading dependency 219 of 426: python3-all-dev:arm64=3.13.9-3 Downloading dependency 220 of 426: fontconfig:arm64=2.17.1-5 Downloading dependency 221 of 426: hostname:arm64=3.25+b1 Downloading dependency 222 of 426: base-passwd:arm64=3.6.8+b1 Downloading dependency 223 of 426: libarchive13t64:arm64=3.8.5-1 Downloading dependency 224 of 426: libtext-charwidth-perl:arm64=0.04-11+b5 Downloading dependency 225 of 426: libxpm4:arm64=1:3.5.17-1+b4 Downloading dependency 226 of 426: libngtcp2-16:arm64=1.21.0-1 Downloading dependency 227 of 426: libglm-dev:arm64=1.0.1+ds-3 Downloading dependency 228 of 426: libtasn1-6:arm64=4.21.0-2 Downloading dependency 229 of 426: libssl-dev:arm64=3.6.1-3 Downloading dependency 230 of 426: libstdc++6:arm64=16-20260322-1 Downloading dependency 231 of 426: libxcb1-dev:arm64=1.17.0-2+b2 Downloading dependency 232 of 426: libxkbcommon0:arm64=1.13.1-1 Downloading dependency 233 of 426: python3.13:arm64=3.13.12-1 Downloading dependency 234 of 426: libnghttp3-9:arm64=1.15.0-1 Downloading dependency 235 of 426: libdrm-common:arm64=2.4.131-1 Downloading dependency 236 of 426: libmount1:arm64=2.42-1 Downloading dependency 237 of 426: libxcb-icccm4:arm64=0.4.2-1+b1 Downloading dependency 238 of 426: libqt5help5:arm64=5.15.17-4+b1 Downloading dependency 239 of 426: libglx-mesa0:arm64=26.0.4-1 Downloading dependency 240 of 426: libasan8:arm64=16-20260322-1 Downloading dependency 241 of 426: libuuid1:arm64=2.42-1 Downloading dependency 242 of 426: libxau6:arm64=1:1.0.11-1+b1 Downloading dependency 243 of 426: debhelper:arm64=13.31 Downloading dependency 244 of 426: libarchive-zip-perl:arm64=1.68-1 Downloading dependency 245 of 426: libxcb-util1:arm64=0.4.1-1+b1 Downloading dependency 246 of 426: libidn2-dev:arm64=2.3.8-4+b1 Downloading dependency 247 of 426: libuchardet0:arm64=0.0.8-2+b1 Downloading dependency 248 of 426: fontconfig-config:arm64=2.17.1-5 Downloading dependency 249 of 426: ncurses-bin:arm64=6.6+20251231-1 Downloading dependency 250 of 426: libunistring5:arm64=1.4.2-1 Downloading dependency 251 of 426: libldap-dev:arm64=2.6.10+dfsg-1+b1 Downloading dependency 252 of 426: findutils:arm64=4.10.0-3+b1 Downloading dependency 253 of 426: libacl1:arm64=2.3.2-3 Downloading dependency 254 of 426: libglvnd0:arm64=1.7.0-3 Downloading dependency 255 of 426: libc6-dev:arm64=2.42-14 Downloading dependency 256 of 426: libaec0:arm64=1.1.6-1Get:1 http://deb.debian.org/debian unstable/main arm64 libaec0 arm64 1.1.6-1 [21.3 kB] Fetched 21.3 kB in 0s (1267 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpatngrorr/libaec0_1.1.6-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libbz2-dev arm64 1.0.8-6+b1 [30.9 kB] Fetched 30.9 kB in 0s (2085 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy2u3z321/libbz2-dev_1.0.8-6+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxdmcp-dev arm64 1:1.1.5-2 [43.5 kB] Fetched 43.5 kB in 0s (2859 kB/s) dpkg-name: info: moved 'libxdmcp-dev_1%3a1.1.5-2_arm64.deb' to '/srv/rebuilderd/tmp/tmpakc9_97w/libxdmcp-dev_1.1.5-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgles2 arm64 1.7.0-3 [18.1 kB] Fetched 18.1 kB in 0s (1218 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwk5iu8e8/libgles2_1.7.0-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-pyqt5 arm64 5.15.11+dfsg-3 [2294 kB] Fetched 2294 kB in 0s (139 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc_ebiz8b/python3-pyqt5_5.15.11+dfsg-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgdbm-compat4t64 arm64 1.26-1+b1 [53.0 kB] Fetched 53.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpedhn08qc/libgdbm-compat4t64_1.26-1+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 librtmp-dev arm64 2.4+20151223.gitfa8646d.1-3+b1 [68.5 kB] Fetched 68.5 kB in 0s (4495 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp59gsegtl/librtmp-dev_2.4+20151223.gitfa8646d.1-3+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libqt5opengl5t64 arm64 5.15.17+dfsg-7+b1 [137 kB] Fetched 137 kB in 0s (8756 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwm_73xap/libqt5opengl5t64_5.15.17+dfsg-7+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libqt5sql5t64 arm64 5.15.17+dfsg-7+b1 [114 kB] Fetched 114 kB in 0s (10.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp35kkos2r/libqt5sql5t64_5.15.17+dfsg-7+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 cpp-15 arm64 15.2.0-16 [1280 B] Fetched 1280 B in 0s (81.6 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1z4jgrcg/cpp-15_15.2.0-16_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxt6t64 arm64 1:1.2.1-1.3+b1 [173 kB] Fetched 173 kB in 0s (13.2 MB/s) dpkg-name: info: moved 'libxt6t64_1%3a1.2.1-1.3+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmp57ii13sz/libxt6t64_1.2.1-1.3+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxrender1 arm64 1:0.9.12-1+b1 [27.2 kB] Fetched 27.2 kB in 0s (1834 kB/s) dpkg-name: info: moved 'libxrender1_1%3a0.9.12-1+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmpeh48fonz/libxrender1_0.9.12-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 groff-base arm64 1.23.0-10+b1 [1133 kB] Fetched 1133 kB in 0s (70.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpiu39swdc/groff-base_1.23.0-10+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libbrotli-dev arm64 1.2.0-3 [311 kB] Fetched 311 kB in 0s (28.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnwopl04n/libbrotli-dev_1.2.0-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxml2-dev arm64 2.15.2+dfsg-0.1 [720 kB] Fetched 720 kB in 0s (32.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9wgo70ln/libxml2-dev_2.15.2+dfsg-0.1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libsynctex2 arm64 2025.20250727.75242+ds-5+b2 [58.8 kB] Fetched 58.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv1p649jw/libsynctex2_2025.20250727.75242+ds-5+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libnghttp3-dev arm64 1.15.0-1 [90.6 kB] Fetched 90.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcs0o630g/libnghttp3-dev_1.15.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 netbase all 6.5 [12.4 kB] Fetched 12.4 kB in 0s (887 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5s00a7d/netbase_6.5_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 libkadm5srv-mit12 arm64 1.22.1-2 [53.7 kB] Fetched 53.7 kB in 0s (3221 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkm7w_ms_/libkadm5srv-mit12_1.22.1-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 libjsoncpp26 arm64 1.9.6-5 [72.4 kB] Fetched 72.4 kB in 0s (4298 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsnqjpim6/libjsoncpp26_1.9.6-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 rpcsvc-proto arm64 1.4.3-1+b2 [60.1 kB] Fetched 60.1 kB in 0s (5694 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_ee2uxps/rpcsvc-proto_1.4.3-1+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libseccomp2 arm64 2.6.0-2+b1 [50.9 kB] Fetched 50.9 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo4crlbf3/libseccomp2_2.6.0-2+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpam-modules arm64 1.7.0-5+b1 [172 kB] Fetched 172 kB in 0s (11.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpclx6d5iv/libpam-modules_1.7.0-5+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libglut3.12 arm64 3.4.0-6+b1 [134 kB] Fetched 134 kB in 0s (13.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7mz3elmo/libglut3.12_3.4.0-6+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgcc-s1 arm64 16-20260322-1 [53.2 kB] Fetched 53.2 kB in 0s (4887 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpiy7ksl9j/libgcc-s1_16-20260322-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libnghttp2-dev arm64 1.68.1-1 [108 kB] Fetched 108 kB in 0s (10.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwdjciuxn/libnghttp2-dev_1.68.1-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb-xinput0 arm64 1.17.0-2+b2 [129 kB] Fetched 129 kB in 0s (7199 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwm_h2ghu/libxcb-xinput0_1.17.0-2+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb1 arm64 1.17.0-2+b2 [142 kB] Fetched 142 kB in 0s (13.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbb8g39i5/libxcb1_1.17.0-2+b2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 bsdextrautils arm64 2.42-1 [97.4 kB] Fetched 97.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp785vodww/bsdextrautils_2.42-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libcc1-0 arm64 16-20260322-1 [38.8 kB] Fetched 38.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnr5s6c0h/libcc1-0_16-20260322-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpam-modules-bin arm64 1.7.0-5+b1 [48.0 kB] Fetched 48.0 kB in 0s (2948 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp24aky4_1/libpam-modules-bin_1.7.0-5+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 cpp arm64 4:15.2.0-5 [1564 B] Fetched 1564 B in 0s (121 kB/s) dpkg-name: info: moved 'cpp_4%3a15.2.0-5_arm64.deb' to '/srv/rebuilderd/tmp/tmpnejh1zbq/cpp_15.2.0-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libidn2-0 arm64 2.3.8-4+b1 [108 kB] Fetched 108 kB in 0s (5967 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp15br5a0t/libidn2-0_2.3.8-4+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb-render0 arm64 1.17.0-2+b2 [115 kB] Fetched 115 kB in 0s (6405 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppygeilcl/libxcb-render0_1.17.0-2+b2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 liblzma5 arm64 5.8.2-2 [320 kB] Fetched 320 kB in 0s (16.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpg2g8zxq2/liblzma5_5.8.2-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libssh2-1-dev arm64 1.11.1-2 [387 kB] Fetched 387 kB in 0s (23.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp05s669nj/libssh2-1-dev_1.11.1-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libhwasan0 arm64 16-20260322-1 [1507 kB] Fetched 1507 kB in 0s (90.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprfn9ffoq/libhwasan0_16-20260322-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libreadline8t64 arm64 8.3-4 [168 kB] Fetched 168 kB in 0s (8986 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpva33uxci/libreadline8t64_8.3-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libc-gconv-modules-extra arm64 2.42-14 [1130 kB] Fetched 1130 kB in 0s (39.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbtezitc8/libc-gconv-modules-extra_2.42-14_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libsframe3 arm64 2.46-3 [85.0 kB] Fetched 85.0 kB in 0s (5098 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpf02uxhrn/libsframe3_2.46-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxshmfence1 arm64 1.3.3-1+b1 [11.4 kB] Fetched 11.4 kB in 0s (800 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3oc2nx9g/libxshmfence1_1.3.3-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 cpp-15-aarch64-linux-gnu arm64 15.2.0-16 [10.1 MB] Fetched 10.1 MB in 0s (251 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpiy47pi6z/cpp-15-aarch64-linux-gnu_15.2.0-16_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 librhash1 arm64 1.4.6-1.1 [128 kB] Fetched 128 kB in 0s (11.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsrasvkdx/librhash1_1.4.6-1.1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 coreutils arm64 9.10-1 [3049 kB] Fetched 3049 kB in 0s (121 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpk6a3opmv/coreutils_9.10-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libproc2-0 arm64 2:4.0.4-9+b1 [62.4 kB] Fetched 62.4 kB in 0s (3917 kB/s) dpkg-name: info: moved 'libproc2-0_2%3a4.0.4-9+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmpur_iagin/libproc2-0_4.0.4-9+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libfreetype6 arm64 2.14.3+dfsg-1 [457 kB] Fetched 457 kB in 0s (26.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzt0529yl/libfreetype6_2.14.3+dfsg-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 libblkid1 arm64 2.42-1 [164 kB] Fetched 164 kB in 0s (11.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7c2kb2vj/libblkid1_2.42-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libsqlite3-0 arm64 3.46.1-9+b1 [851 kB] Fetched 851 kB in 0s (36.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3qtz49jt/libsqlite3-0_3.46.1-9+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libopengl-dev arm64 1.7.0-3 [5348 B] Fetched 5348 B in 0s (530 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2jfdktk3/libopengl-dev_1.7.0-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 dh-python all 7.20260309 [114 kB] Fetched 114 kB in 0s (5797 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpypva9oss/dh-python_7.20260309_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb-keysyms1 arm64 0.4.1-1+b1 [17.1 kB] Fetched 17.1 kB in 0s (1165 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5xfbmbby/libxcb-keysyms1_0.4.1-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxmu6 arm64 2:1.1.3-4 [55.0 kB] Fetched 55.0 kB in 0s (3222 kB/s) dpkg-name: info: moved 'libxmu6_2%3a1.1.3-4_arm64.deb' to '/srv/rebuilderd/tmp/tmp_7nk37yx/libxmu6_1.1.3-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libcap-ng0 arm64 0.9.2-1 [16.4 kB] Fetched 16.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcugtf1ub/libcap-ng0_0.9.2-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-jaraco.context all 6.0.1-2 [8184 B] Fetched 8184 B in 0s (537 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2natdnw_/python3-jaraco.context_6.0.1-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libjansson4 arm64 2.14-2+b4 [38.9 kB] Fetched 38.9 kB in 0s (3230 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_s4kwjtm/libjansson4_2.14-2+b4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 libnettle8t64 arm64 3.10.2-1 [305 kB] Fetched 305 kB in 0s (15.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnm3io0t9/libnettle8t64_3.10.2-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libzzip-0-13t64 arm64 0.13.78+dfsg.1-0.2 [59.4 kB] Fetched 59.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplzaglooh/libzzip-0-13t64_0.13.78+dfsg.1-0.2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 libpipeline1 arm64 1.5.8-2 [40.3 kB] Fetched 40.3 kB in 0s (1967 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpg_akuxwo/libpipeline1_1.5.8-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libx11-data all 2:1.8.13-1 [346 kB] Fetched 346 kB in 0s (17.7 MB/s) dpkg-name: info: moved 'libx11-data_2%3a1.8.13-1_all.deb' to '/srv/rebuilderd/tmp/tmp5ifgx1f4/libx11-data_1.8.13-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-inflect all 7.5.0-1 [33.0 kB] Fetched 33.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxnlvb_8c/python3-inflect_7.5.0-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 util-linux arm64 2.42-1 [1177 kB] Fetched 1177 kB in 0s (84.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpql065j9h/util-linux_2.42-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libwacom9 arm64 2.18.0-1 [25.7 kB] Fetched 25.7 kB in 0s (2120 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsxsl9t3a/libwacom9_2.18.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libaudit-common all 1:4.1.2-1 [14.3 kB] Fetched 14.3 kB in 0s (0 B/s) dpkg-name: info: moved 'libaudit-common_1%3a4.1.2-1_all.deb' to '/srv/rebuilderd/tmp/tmpdlla84sx/libaudit-common_4.1.2-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-all arm64 3.13.9-3 [1048 B] Fetched 1048 B in 0s (65.8 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp51om4av6/python3-all_3.13.9-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpkgconf7 arm64 2.5.1-4 [45.5 kB] Fetched 45.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph0y5zbbd/libpkgconf7_2.5.1-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 debconf all 1.5.92 [123 kB] Fetched 123 kB in 0s (6795 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpesgn3oyx/debconf_1.5.92_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 dh-autoreconf all 22 [12.2 kB] Fetched 12.2 kB in 0s (719 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1wl17yb4/dh-autoreconf_22_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libcurl4t64 arm64 8.19.0-3 [368 kB] Fetched 368 kB in 0s (18.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz9j74xp4/libcurl4t64_8.19.0-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libedit2 arm64 3.1-20251016-1 [88.7 kB] Fetched 88.7 kB in 0s (5794 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsfa6gjpo/libedit2_3.1-20251016-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 pkgconf arm64 2.5.1-4 [33.6 kB] Fetched 33.6 kB in 0s (2772 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2gyinn11/pkgconf_2.5.1-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libbz2-1.0 arm64 1.0.8-6+b1 [37.1 kB] Fetched 37.1 kB in 0s (1642 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7krhdtga/libbz2-1.0_1.0.8-6+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 libkrb5support0 arm64 1.22.1-2 [32.2 kB] Fetched 32.2 kB in 0s (2098 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkhzblqz9/libkrb5support0_1.22.1-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 gettext-base arm64 0.23.2-2 [240 kB] Fetched 240 kB in 0s (15.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplcvgeh9a/gettext-base_0.23.2-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libctf0 arm64 2.46-3 [86.0 kB] Fetched 86.0 kB in 0s (5131 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpddk6o7qm/libctf0_2.46-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libhdf5-hl-310 arm64 1.14.6+repack-2 [61.3 kB] Fetched 61.3 kB in 0s (4245 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdhglxqd0/libhdf5-hl-310_1.14.6+repack-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 libsmartcols1 arm64 2.42-1 [137 kB] Fetched 137 kB in 0s (8696 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt30fshh7/libsmartcols1_2.42-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libzstd-dev arm64 1.5.7+dfsg-3+b1 [330 kB] Fetched 330 kB in 0s (16.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpse7tkal3/libzstd-dev_1.5.7+dfsg-3+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpsl-dev arm64 0.21.5-1 [80.6 kB] Fetched 80.6 kB in 0s (4657 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2p9qp3eh/libpsl-dev_0.21.5-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxext-dev arm64 2:1.3.4-1+b4 [104 kB] Fetched 104 kB in 0s (0 B/s) dpkg-name: info: moved 'libxext-dev_2%3a1.3.4-1+b4_arm64.deb' to '/srv/rebuilderd/tmp/tmp7qjizvcn/libxext-dev_1.3.4-1+b4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxau-dev arm64 1:1.0.11-1+b1 [24.1 kB] Fetched 24.1 kB in 0s (2188 kB/s) dpkg-name: info: moved 'libxau-dev_1%3a1.0.11-1+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmp8sqm33vs/libxau-dev_1.0.11-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxxhash0 arm64 0.8.3-2+b1 [22.4 kB] Fetched 22.4 kB in 0s (1349 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpllw2slr3/libxxhash0_0.8.3-2+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libubsan1 arm64 16-20260322-1 [1080 kB] Fetched 1080 kB in 0s (40.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppd3xpbvc/libubsan1_16-20260322-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 binutils-aarch64-linux-gnu arm64 2.46-3 [867 kB] Fetched 867 kB in 0s (49.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1n73jgxy/binutils-aarch64-linux-gnu_2.46-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libfreetype-dev arm64 2.14.3+dfsg-1 [634 kB] Fetched 634 kB in 0s (37.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyy43zkaz/libfreetype-dev_2.14.3+dfsg-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-minimal arm64 3.13.9-3 [27.6 kB] Fetched 27.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7medv877/python3-minimal_3.13.9-3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 libglew-dev arm64 2.3.1-3 [171 kB] Fetched 171 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr4wfxpsr/libglew-dev_2.3.1-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpam-runtime all 1.7.0-5 [249 kB] Fetched 249 kB in 0s (16.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8l5u3rm6/libpam-runtime_1.7.0-5_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxt-dev arm64 1:1.2.1-1.3+b1 [403 kB] Fetched 403 kB in 0s (7689 kB/s) dpkg-name: info: moved 'libxt-dev_1%3a1.2.1-1.3+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmpoxkb1t4f/libxt-dev_1.2.1-1.3+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libfile-stripnondeterminism-perl all 1.15.0-1 [19.9 kB] Fetched 19.9 kB in 0s (1417 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8e0whml_/libfile-stripnondeterminism-perl_1.15.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libcurl4-openssl-dev arm64 8.19.0-3 [506 kB] Fetched 506 kB in 0s (30.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5p7z4zqs/libcurl4-openssl-dev_8.19.0-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpython3.13-stdlib arm64 3.13.12-1 [1908 kB] Fetched 1908 kB in 0s (92.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjgvqjus1/libpython3.13-stdlib_3.13.12-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.2-3 [916 kB] Fetched 916 kB in 0s (74.1 MB/s) dpkg-name: info: moved 'zlib1g-dev_1%3a1.3.dfsg+really1.3.2-3_arm64.deb' to '/srv/rebuilderd/tmp/tmpaf5wamc1/zlib1g-dev_1.3.dfsg+really1.3.2-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb-glx0 arm64 1.17.0-2+b2 [122 kB] Fetched 122 kB in 0s (11.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpq16_z1wn/libxcb-glx0_1.17.0-2+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libevent-2.1-7t64 arm64 2.1.12-stable-10+b2 [170 kB] Fetched 170 kB in 0s (5418 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz17zi9lz/libevent-2.1-7t64_2.1.12-stable-10+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 cmake arm64 4.3.1-1 [13.8 MB] Fetched 13.8 MB in 0s (185 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjcbsun5w/cmake_4.3.1-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 perl-modules-5.40 all 5.40.1-7 [3012 kB] Fetched 3012 kB in 0s (68.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp41ws5xr5/perl-modules-5.40_5.40.1-7_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 libhogweed6t64 arm64 3.10.2-1 [332 kB] Fetched 332 kB in 0s (17.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpk3y_u96c/libhogweed6t64_3.10.2-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libegl1 arm64 1.7.0-3 [34.1 kB] Fetched 34.1 kB in 0s (2035 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz_krfz1p/libegl1_1.7.0-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 dpkg-dev all 1.23.7 [1318 kB] Fetched 1318 kB in 0s (46.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpinsym83o/dpkg-dev_1.23.7_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-autocommand all 2.2.2-4 [13.7 kB] Fetched 13.7 kB in 0s (820 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy0x71mdc/python3-autocommand_2.2.2-4_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 libpng16-16t64 arm64 1.6.56-1 [276 kB] Fetched 276 kB in 0s (17.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvylan_26/libpng16-16t64_1.6.56-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 file arm64 1:5.46-5+b1 [44.0 kB] Fetched 44.0 kB in 0s (3863 kB/s) dpkg-name: info: moved 'file_1%3a5.46-5+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmpb7evw5l4/file_5.46-5+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 libkrb5-dev arm64 1.22.1-2 [16.1 kB] Fetched 16.1 kB in 0s (1083 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7soxe5c8/libkrb5-dev_1.22.1-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpython3.13-dev arm64 3.13.12-1 [5035 kB] Fetched 5035 kB in 0s (175 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9zdz9jid/libpython3.13-dev_3.13.12-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libnetcdf-dev arm64 1:4.10.0-1 [122 kB] Fetched 122 kB in 0s (12.1 MB/s) dpkg-name: info: moved 'libnetcdf-dev_1%3a4.10.0-1_arm64.deb' to '/srv/rebuilderd/tmp/tmps50kwnwb/libnetcdf-dev_4.10.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libdrm2 arm64 2.4.131-1 [38.3 kB] Fetched 38.3 kB in 0s (3772 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgqq45qln/libdrm2_2.4.131-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 mesa-libgallium arm64 26.0.4-1 [10.5 MB] Fetched 10.5 MB in 0s (247 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppv2xsl6x/mesa-libgallium_26.0.4-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libzstd1 arm64 1.5.7+dfsg-3+b1 [261 kB] Fetched 261 kB in 0s (13.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmstol_ak/libzstd1_1.5.7+dfsg-3+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libsensors-config all 1:3.6.2-2 [16.2 kB] Fetched 16.2 kB in 0s (958 kB/s) dpkg-name: info: moved 'libsensors-config_1%3a3.6.2-2_all.deb' to '/srv/rebuilderd/tmp/tmpwj81mb7w/libsensors-config_3.6.2-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 bash arm64 5.3-2 [1505 kB] Fetched 1505 kB in 0s (50.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpeqs375an/bash_5.3-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libavahi-common-data arm64 0.8-18 [113 kB] Fetched 113 kB in 0s (7451 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_7b38pn0/libavahi-common-data_0.8-18_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libtext-wrapi18n-perl all 0.06-10 [8808 B] Fetched 8808 B in 0s (603 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5mttyaxc/libtext-wrapi18n-perl_0.06-10_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libcurl3t64-gnutls arm64 8.19.0-3 [362 kB] Fetched 362 kB in 0s (21.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3fbns_ku/libcurl3t64-gnutls_8.19.0-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libllvm21 arm64 1:21.1.8-7 [25.4 MB] Fetched 25.4 MB in 0s (134 MB/s) dpkg-name: info: moved 'libllvm21_1%3a21.1.8-7_arm64.deb' to '/srv/rebuilderd/tmp/tmph38iwu72/libllvm21_21.1.8-7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libhdf5-310 arm64 1.14.6+repack-2 [1121 kB] Fetched 1121 kB in 0s (64.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp53a33w4y/libhdf5-310_1.14.6+repack-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 m4 arm64 1.4.21-1 [323 kB] Fetched 323 kB in 0s (20.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbg77nlp5/m4_1.4.21-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libstdc++-15-dev arm64 15.2.0-16 [2650 kB] Fetched 2650 kB in 0s (39.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc2yfqa2z/libstdc++-15-dev_15.2.0-16_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-jaraco.text all 4.0.0-1 [11.4 kB] Fetched 11.4 kB in 0s (711 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbls_a72p/python3-jaraco.text_4.0.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 init-system-helpers all 1.69 [39.3 kB] Fetched 39.3 kB in 0s (2228 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyavil696/init-system-helpers_1.69_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxkbcommon-x11-0 arm64 1.13.1-1 [19.7 kB] Fetched 19.7 kB in 0s (1812 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprvq3ubtf/libxkbcommon-x11-0_1.13.1-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpython3.13-minimal arm64 3.13.12-1 [860 kB] Fetched 860 kB in 0s (36.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpru6j2qwy/libpython3.13-minimal_3.13.12-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 sed arm64 4.9-2+b2 [326 kB] Fetched 326 kB in 0s (25.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjpmtnfy6/sed_4.9-2+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpaper2 arm64 2.2.5-0.3+b3 [16.6 kB] Fetched 16.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp32jxvmim/libpaper2_2.2.5-0.3+b3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb-shm0 arm64 1.17.0-2+b2 [105 kB] Fetched 105 kB in 0s (3657 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy17_kdkj/libxcb-shm0_1.17.0-2+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libldap2 arm64 2.6.10+dfsg-1+b1 [179 kB] Fetched 179 kB in 0s (11.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpon6_b85z/libldap2_2.6.10+dfsg-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 ncurses-base all 6.6+20251231-1 [277 kB] Fetched 277 kB in 0s (17.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn47uspun/ncurses-base_6.6+20251231-1_all.deb' Downloading dependency 257 of 426: libbz2-dev:arm64=1.0.8-6+b1 Downloading dependency 258 of 426: libxdmcp-dev:arm64=1:1.1.5-2 Downloading dependency 259 of 426: libgles2:arm64=1.7.0-3 Downloading dependency 260 of 426: python3-pyqt5:arm64=5.15.11+dfsg-3 Downloading dependency 261 of 426: libgdbm-compat4t64:arm64=1.26-1+b1 Downloading dependency 262 of 426: librtmp-dev:arm64=2.4+20151223.gitfa8646d.1-3+b1 Downloading dependency 263 of 426: libqt5opengl5t64:arm64=5.15.17+dfsg-7+b1 Downloading dependency 264 of 426: libqt5sql5t64:arm64=5.15.17+dfsg-7+b1 Downloading dependency 265 of 426: cpp-15:arm64=15.2.0-16 Downloading dependency 266 of 426: libxt6t64:arm64=1:1.2.1-1.3+b1 Downloading dependency 267 of 426: libxrender1:arm64=1:0.9.12-1+b1 Downloading dependency 268 of 426: groff-base:arm64=1.23.0-10+b1 Downloading dependency 269 of 426: libbrotli-dev:arm64=1.2.0-3 Downloading dependency 270 of 426: libxml2-dev:arm64=2.15.2+dfsg-0.1 Downloading dependency 271 of 426: libsynctex2:arm64=2025.20250727.75242+ds-5+b2 Downloading dependency 272 of 426: libnghttp3-dev:arm64=1.15.0-1 Downloading dependency 273 of 426: netbase:arm64=6.5 Downloading dependency 274 of 426: libkadm5srv-mit12:arm64=1.22.1-2 Downloading dependency 275 of 426: libjsoncpp26:arm64=1.9.6-5 Downloading dependency 276 of 426: rpcsvc-proto:arm64=1.4.3-1+b2 Downloading dependency 277 of 426: libseccomp2:arm64=2.6.0-2+b1 Downloading dependency 278 of 426: libpam-modules:arm64=1.7.0-5+b1 Downloading dependency 279 of 426: libglut3.12:arm64=3.4.0-6+b1 Downloading dependency 280 of 426: libgcc-s1:arm64=16-20260322-1 Downloading dependency 281 of 426: libnghttp2-dev:arm64=1.68.1-1 Downloading dependency 282 of 426: libxcb-xinput0:arm64=1.17.0-2+b2 Downloading dependency 283 of 426: libxcb1:arm64=1.17.0-2+b2 Downloading dependency 284 of 426: bsdextrautils:arm64=2.42-1 Downloading dependency 285 of 426: libcc1-0:arm64=16-20260322-1 Downloading dependency 286 of 426: libpam-modules-bin:arm64=1.7.0-5+b1 Downloading dependency 287 of 426: cpp:arm64=4:15.2.0-5 Downloading dependency 288 of 426: libidn2-0:arm64=2.3.8-4+b1 Downloading dependency 289 of 426: libxcb-render0:arm64=1.17.0-2+b2 Downloading dependency 290 of 426: liblzma5:arm64=5.8.2-2 Downloading dependency 291 of 426: libssh2-1-dev:arm64=1.11.1-2 Downloading dependency 292 of 426: libhwasan0:arm64=16-20260322-1 Downloading dependency 293 of 426: libreadline8t64:arm64=8.3-4 Downloading dependency 294 of 426: libc-gconv-modules-extra:arm64=2.42-14 Downloading dependency 295 of 426: libsframe3:arm64=2.46-3 Downloading dependency 296 of 426: libxshmfence1:arm64=1.3.3-1+b1 Downloading dependency 297 of 426: cpp-15-aarch64-linux-gnu:arm64=15.2.0-16 Downloading dependency 298 of 426: librhash1:arm64=1.4.6-1.1 Downloading dependency 299 of 426: coreutils:arm64=9.10-1 Downloading dependency 300 of 426: libproc2-0:arm64=2:4.0.4-9+b1 Downloading dependency 301 of 426: libfreetype6:arm64=2.14.3+dfsg-1 Downloading dependency 302 of 426: libblkid1:arm64=2.42-1 Downloading dependency 303 of 426: libsqlite3-0:arm64=3.46.1-9+b1 Downloading dependency 304 of 426: libopengl-dev:arm64=1.7.0-3 Downloading dependency 305 of 426: dh-python:arm64=7.20260309 Downloading dependency 306 of 426: libxcb-keysyms1:arm64=0.4.1-1+b1 Downloading dependency 307 of 426: libxmu6:arm64=2:1.1.3-4 Downloading dependency 308 of 426: libcap-ng0:arm64=0.9.2-1 Downloading dependency 309 of 426: python3-jaraco.context:arm64=6.0.1-2 Downloading dependency 310 of 426: libjansson4:arm64=2.14-2+b4 Downloading dependency 311 of 426: libnettle8t64:arm64=3.10.2-1 Downloading dependency 312 of 426: libzzip-0-13t64:arm64=0.13.78+dfsg.1-0.2 Downloading dependency 313 of 426: libpipeline1:arm64=1.5.8-2 Downloading dependency 314 of 426: libx11-data:arm64=2:1.8.13-1 Downloading dependency 315 of 426: python3-inflect:arm64=7.5.0-1 Downloading dependency 316 of 426: util-linux:arm64=2.42-1 Downloading dependency 317 of 426: libwacom9:arm64=2.18.0-1 Downloading dependency 318 of 426: libaudit-common:arm64=1:4.1.2-1 Downloading dependency 319 of 426: python3-all:arm64=3.13.9-3 Downloading dependency 320 of 426: libpkgconf7:arm64=2.5.1-4 Downloading dependency 321 of 426: debconf:arm64=1.5.92 Downloading dependency 322 of 426: dh-autoreconf:arm64=22 Downloading dependency 323 of 426: libcurl4t64:arm64=8.19.0-3 Downloading dependency 324 of 426: libedit2:arm64=3.1-20251016-1 Downloading dependency 325 of 426: pkgconf:arm64=2.5.1-4 Downloading dependency 326 of 426: libbz2-1.0:arm64=1.0.8-6+b1 Downloading dependency 327 of 426: libkrb5support0:arm64=1.22.1-2 Downloading dependency 328 of 426: gettext-base:arm64=0.23.2-2 Downloading dependency 329 of 426: libctf0:arm64=2.46-3 Downloading dependency 330 of 426: libhdf5-hl-310:arm64=1.14.6+repack-2 Downloading dependency 331 of 426: libsmartcols1:arm64=2.42-1 Downloading dependency 332 of 426: libzstd-dev:arm64=1.5.7+dfsg-3+b1 Downloading dependency 333 of 426: libpsl-dev:arm64=0.21.5-1 Downloading dependency 334 of 426: libxext-dev:arm64=2:1.3.4-1+b4 Downloading dependency 335 of 426: libxau-dev:arm64=1:1.0.11-1+b1 Downloading dependency 336 of 426: libxxhash0:arm64=0.8.3-2+b1 Downloading dependency 337 of 426: libubsan1:arm64=16-20260322-1 Downloading dependency 338 of 426: binutils-aarch64-linux-gnu:arm64=2.46-3 Downloading dependency 339 of 426: libfreetype-dev:arm64=2.14.3+dfsg-1 Downloading dependency 340 of 426: python3-minimal:arm64=3.13.9-3 Downloading dependency 341 of 426: libglew-dev:arm64=2.3.1-3 Downloading dependency 342 of 426: libpam-runtime:arm64=1.7.0-5 Downloading dependency 343 of 426: libxt-dev:arm64=1:1.2.1-1.3+b1 Downloading dependency 344 of 426: libfile-stripnondeterminism-perl:arm64=1.15.0-1 Downloading dependency 345 of 426: libcurl4-openssl-dev:arm64=8.19.0-3 Downloading dependency 346 of 426: libpython3.13-stdlib:arm64=3.13.12-1 Downloading dependency 347 of 426: zlib1g-dev:arm64=1:1.3.dfsg+really1.3.2-3 Downloading dependency 348 of 426: libxcb-glx0:arm64=1.17.0-2+b2 Downloading dependency 349 of 426: libevent-2.1-7t64:arm64=2.1.12-stable-10+b2 Downloading dependency 350 of 426: cmake:arm64=4.3.1-1 Downloading dependency 351 of 426: perl-modules-5.40:arm64=5.40.1-7 Downloading dependency 352 of 426: libhogweed6t64:arm64=3.10.2-1 Downloading dependency 353 of 426: libegl1:arm64=1.7.0-3 Downloading dependency 354 of 426: dpkg-dev:arm64=1.23.7 Downloading dependency 355 of 426: python3-autocommand:arm64=2.2.2-4 Downloading dependency 356 of 426: libpng16-16t64:arm64=1.6.56-1 Downloading dependency 357 of 426: file:arm64=1:5.46-5+b1 Downloading dependency 358 of 426: libkrb5-dev:arm64=1.22.1-2 Downloading dependency 359 of 426: libpython3.13-dev:arm64=3.13.12-1 Downloading dependency 360 of 426: libnetcdf-dev:arm64=1:4.10.0-1 Downloading dependency 361 of 426: libdrm2:arm64=2.4.131-1 Downloading dependency 362 of 426: mesa-libgallium:arm64=26.0.4-1 Downloading dependency 363 of 426: libzstd1:arm64=1.5.7+dfsg-3+b1 Downloading dependency 364 of 426: libsensors-config:arm64=1:3.6.2-2 Downloading dependency 365 of 426: bash:arm64=5.3-2 Downloading dependency 366 of 426: libavahi-common-data:arm64=0.8-18 Downloading dependency 367 of 426: libtext-wrapi18n-perl:arm64=0.06-10 Downloading dependency 368 of 426: libcurl3t64-gnutls:arm64=8.19.0-3 Downloading dependency 369 of 426: libllvm21:arm64=1:21.1.8-7 Downloading dependency 370 of 426: libhdf5-310:arm64=1.14.6+repack-2 Downloading dependency 371 of 426: m4:arm64=1.4.21-1 Downloading dependency 372 of 426: libstdc++-15-dev:arm64=15.2.0-16 Downloading dependency 373 of 426: python3-jaraco.text:arm64=4.0.0-1 Downloading dependency 374 of 426: init-system-helpers:arm64=1.69 Downloading dependency 375 of 426: libxkbcommon-x11-0:arm64=1.13.1-1 Downloading dependency 376 of 426: libpython3.13-minimal:arm64=3.13.12-1 Downloading dependency 377 of 426: sed:arm64=4.9-2+b2 Downloading dependency 378 of 426: libpaper2:arm64=2.2.5-0.3+b3 Downloading dependency 379 of 426: libxcb-shm0:arm64=1.17.0-2+b2 Downloading dependency 380 of 426: libldap2:arm64=2.6.10+dfsg-1+b1 Downloading dependency 381 of 426: ncurses-base:arm64=6.6+20251231-1 Downloading dependency 382 of 426: libinput-bin:arm64=1.31.0-1Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 libinput-bin arm64 1.31.0-1 [28.7 kB] Fetched 28.7 kB in 0s (1490 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8xd0u5my/libinput-bin_1.31.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpaper-utils arm64 2.2.5-0.3+b3 [16.3 kB] Fetched 16.3 kB in 0s (901 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb4h0un3x/libpaper-utils_2.2.5-0.3+b3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpsl5t64 arm64 0.21.5-1 [59.7 kB] Fetched 59.7 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmm4oww8p/libpsl5t64_0.21.5-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libp11-kit0 arm64 0.26.2-2 [436 kB] Fetched 436 kB in 0s (20.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4dsvxgl_/libp11-kit0_0.26.2-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 libpython3.14 arm64 3.14.3-5 [2243 kB] Fetched 2243 kB in 0s (64.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9gd9k21l/libpython3.14_3.14.3-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 sysvinit-utils arm64 3.18-1 [29.6 kB] Fetched 29.6 kB in 0s (2865 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3ym2af6k/sysvinit-utils_3.18-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libtsan2 arm64 16-20260322-1 [2449 kB] Fetched 2449 kB in 0s (109 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7zpmr739/libtsan2_16-20260322-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 texlive-binaries arm64 2025.20250727.75242+ds-5+b2 [7439 kB] Fetched 7439 kB in 0s (106 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppp33khfv/texlive-binaries_2025.20250727.75242+ds-5+b2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20260404T082424Z unstable/main arm64 uuid-dev arm64 2.42-1 [44.0 kB] Fetched 44.0 kB in 0s (2335 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkqjmfs3c/uuid-dev_2.42-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libelf1t64 arm64 0.194-4 [182 kB] Fetched 182 kB in 0s (16.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6ywx65bv/libelf1t64_0.194-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libcom-err2 arm64 1.47.4-1 [19.2 kB] Fetched 19.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9cfw7o23/libcom-err2_1.47.4-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgomp1 arm64 16-20260322-1 [131 kB] Fetched 131 kB in 0s (7223 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdmfo97hk/libgomp1_16-20260322-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 dpkg arm64 1.23.7 [1512 kB] Fetched 1512 kB in 0s (93.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpukd1iio1/dpkg_1.23.7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libexpat1 arm64 2.7.5-1 [100.0 kB] Fetched 100.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprzvcwilm/libexpat1_2.7.5-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libwacom-common all 2.18.0-1 [117 kB] Fetched 117 kB in 0s (11.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6b55ye41/libwacom-common_2.18.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgmpxx4ldbl arm64 2:6.3.0+dfsg-5+b1 [329 kB] Fetched 329 kB in 0s (17.4 MB/s) dpkg-name: info: moved 'libgmpxx4ldbl_2%3a6.3.0+dfsg-5+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmps9yp6ye3/libgmpxx4ldbl_6.3.0+dfsg-5+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libnetcdf22 arm64 1:4.10.0-1 [483 kB] Fetched 483 kB in 0s (30.0 MB/s) dpkg-name: info: moved 'libnetcdf22_1%3a4.10.0-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpawwf7lmm/libnetcdf22_4.10.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libvulkan1 arm64 1.4.341.0-1 [140 kB] Fetched 140 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptw12jxz3/libvulkan1_1.4.341.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 fonts-dejavu-core all 2.37-8 [840 kB] Fetched 840 kB in 0s (29.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzlvky6j2/fonts-dejavu-core_2.37-8_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libtexlua53-5 arm64 2025.20250727.75242+ds-5+b2 [104 kB] Fetched 104 kB in 0s (7799 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwsmb16yv/libtexlua53-5_2025.20250727.75242+ds-5+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-opengl all 3.1.10+dfsg-1 [624 kB] Fetched 624 kB in 0s (53.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv9tyzlaz/python3-opengl_3.1.10+dfsg-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 xorg-sgml-doctools all 1:1.12.1-1 [23.9 kB] Fetched 23.9 kB in 0s (2315 kB/s) dpkg-name: info: moved 'xorg-sgml-doctools_1%3a1.12.1-1_all.deb' to '/srv/rebuilderd/tmp/tmpglw2jlrw/xorg-sgml-doctools_1.12.1-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libqt5designer5 arm64 5.15.17-4+b1 [2713 kB] Fetched 2713 kB in 0s (140 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpii7x8e9r/libqt5designer5_5.15.17-4+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 x11-common all 1:7.7+26 [217 kB] Fetched 217 kB in 0s (15.9 MB/s) dpkg-name: info: moved 'x11-common_1%3a7.7+26_all.deb' to '/srv/rebuilderd/tmp/tmpteo6w7rc/x11-common_7.7+26_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 autopoint all 0.23.2-2 [770 kB] Fetched 770 kB in 0s (33.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptr25yva_/autopoint_0.23.2-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 debianutils arm64 5.23.2+b1 [92.6 kB] Fetched 92.6 kB in 0s (7591 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdznn9oz2/debianutils_5.23.2+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 gcc-16-base arm64 16-20260322-1 [35.6 kB] Fetched 35.6 kB in 0s (2095 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpa2plr7qj/gcc-16-base_16-20260322-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 comerr-dev arm64 2.1-1.47.4-1 [51.1 kB] Fetched 51.1 kB in 0s (3061 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd9zjoemr/comerr-dev_2.1-1.47.4-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libfontconfig1 arm64 2.17.1-5 [125 kB] Fetched 125 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4fke8bob/libfontconfig1_2.17.1-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpython3-all-dev arm64 3.13.9-3 [1072 B] Fetched 1072 B in 0s (74.6 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjq8o_egw/libpython3-all-dev_3.13.9-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 autoconf all 2.72-6 [494 kB] Fetched 494 kB in 0s (41.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp87vv192k/autoconf_2.72-6_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libngtcp2-dev arm64 1.21.0-1 [184 kB] Fetched 184 kB in 0s (17.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc6r7m8j_/libngtcp2-dev_1.21.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgl1 arm64 1.7.0-3 [89.9 kB] Fetched 89.9 kB in 0s (4983 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_g372tsj/libgl1_1.7.0-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-more-itertools all 10.8.0-1 [71.7 kB] Fetched 71.7 kB in 0s (4213 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_3p6nly4/python3-more-itertools_10.8.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxi6 arm64 2:1.8.2-2 [77.5 kB] Fetched 77.5 kB in 0s (0 B/s) dpkg-name: info: moved 'libxi6_2%3a1.8.2-2_arm64.deb' to '/srv/rebuilderd/tmp/tmptzyck7jz/libxi6_1.8.2-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libc6 arm64 2.42-14 [1386 kB] Fetched 1386 kB in 0s (100 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvrmzlp4m/libc6_2.42-14_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libz3-4 arm64 4.13.3-1+b1 [7370 kB] Fetched 7370 kB in 0s (225 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2tsaoggw/libz3-4_4.13.3-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libkpathsea6 arm64 2025.20250727.75242+ds-5+b2 [152 kB] Fetched 152 kB in 0s (14.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpahtpqkf0/libkpathsea6_2025.20250727.75242+ds-5+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb-shape0 arm64 1.17.0-2+b2 [106 kB] Fetched 106 kB in 0s (10.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_e8fovgh/libxcb-shape0_1.17.0-2+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libtool all 2.5.4-10 [539 kB] Fetched 539 kB in 0s (23.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5rza8hlr/libtool_2.5.4-10_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb-present0 arm64 1.17.0-2+b2 [106 kB] Fetched 106 kB in 0s (4867 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmftmmws0/libxcb-present0_1.17.0-2+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libngtcp2-crypto-ossl-dev arm64 1.21.0-1 [26.1 kB] Fetched 26.1 kB in 0s (1567 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpneg9tjt2/libngtcp2-crypto-ossl-dev_1.21.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 xdg-utils all 1.2.1-2 [75.8 kB] Fetched 75.8 kB in 0s (4178 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp19bxz192/xdg-utils_1.2.1-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libsystemd0 arm64 260.1-1 [406 kB] Fetched 406 kB in 0s (31.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmht8dl45/libsystemd0_260.1-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libteckit0 arm64 2.5.13+ds-1 [331 kB] Fetched 331 kB in 0s (33.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyc0pzfnm/libteckit0_2.5.13+ds-1_arm64.deb' dpkg-buildpackage: info: source package debootsnap-dummy dpkg-buildpackage: info: source version 1.0 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Equivs Dummy Package Generator dpkg-buildpackage: info: host architecture arm64 dpkg-source --before-build . debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/debootsnap-dummy/ dh_install dh_installdocs dh_installchangelogs dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'debootsnap-dummy' in '../debootsnap-dummy_1.0_all.deb'. dpkg-genbuildinfo --build=binary -O../debootsnap-dummy_1.0_arm64.buildinfo dpkg-genchanges --build=binary -O../debootsnap-dummy_1.0_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) The package has been created. Attention, the package has been created in the /srv/rebuilderd/tmp/tmpb1kp_nog/cache directory, not in ".." as indicated by the message above! I: automatically chosen mode: unshare I: chroot architecture arm64 is equal to the host's architecture I: using /srv/rebuilderd/tmp/mmdebstrap.2U9ag973B4 as tempdir I: running --setup-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/setup00.sh /srv/rebuilderd/tmp/mmdebstrap.2U9ag973B4 127.0.0.1 - - [13/Apr/2026 12:59:32] code 404, message File not found 127.0.0.1 - - [13/Apr/2026 12:59:32] "GET /./InRelease HTTP/1.1" 404 - Ign:1 http://localhost:34441 ./ InRelease 127.0.0.1 - - [13/Apr/2026 12:59:32] "GET /./Release HTTP/1.1" 200 - Get:2 http://localhost:34441 ./ Release [462 B] 127.0.0.1 - - [13/Apr/2026 12:59:32] code 404, message File not found 127.0.0.1 - - [13/Apr/2026 12:59:32] "GET /./Release.gpg HTTP/1.1" 404 - Ign:3 http://localhost:34441 ./ Release.gpg 127.0.0.1 - - [13/Apr/2026 12:59:32] "GET /./Packages HTTP/1.1" 200 - Get:4 http://localhost:34441 ./ Packages [536 kB] Fetched 536 kB in 0s (16.8 MB/s) Reading package lists... usr-is-merged found but not real -- not running merged-usr setup hook I: skipping apt-get update because it was already run I: downloading packages with apt... 127.0.0.1 - 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- [13/Apr/2026 12:59:45] "GET /./python3-pyqt5.qtopengl_5.15.11%2bdfsg-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [13/Apr/2026 12:59:45] "GET /./libpython3-all-dev_3.13.9-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [13/Apr/2026 12:59:45] "GET /./python3-all_3.13.9-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [13/Apr/2026 12:59:45] "GET /./python3-all-dev_3.13.9-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [13/Apr/2026 12:59:45] "GET /./libglm-dev_1.0.1%2bds-3_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [13/Apr/2026 12:59:45] "GET /./libbz2-dev_1.0.8-6%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [13/Apr/2026 12:59:45] "GET /./libgles2_1.7.0-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [13/Apr/2026 12:59:45] "GET /./libxml2-dev_2.15.2%2bdfsg-0.1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [13/Apr/2026 12:59:45] "GET /./dh-python_7.20260309_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [13/Apr/2026 12:59:45] "GET /./libfreetype-dev_2.14.3%2bdfsg-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [13/Apr/2026 12:59:45] "GET /./libglew-dev_2.3.1-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [13/Apr/2026 12:59:45] "GET /./libcurl3t64-gnutls_8.19.0-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [13/Apr/2026 12:59:45] "GET /./libnetcdf22_4.10.0-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [13/Apr/2026 12:59:45] "GET /./libnetcdf-dev_4.10.0-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [13/Apr/2026 12:59:45] "GET /./python3-opengl_3.1.10%2bdfsg-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [13/Apr/2026 12:59:45] "GET /./debootsnap-dummy_1.0_all.deb HTTP/1.1" 200 - I: running --customize-hook directly: /srv/rebuilderd/tmp/tmpb1kp_nog/apt_install.sh /srv/rebuilderd/tmp/mmdebstrap.2U9ag973B4 Reading package lists... Building dependency tree... Reading state information... libgprofng0 is already the newest version (2.46-3). libgprofng0 set to manually installed. python3-pkg-resources is already the newest version (78.1.1-0.1). python3-pkg-resources set to manually installed. libexpat1-dev is already the newest version (2.7.5-1). libexpat1-dev set to manually installed. libctf-nobfd0 is already the newest version (2.46-3). libctf-nobfd0 set to manually installed. libhdf5-hl-cpp-310 is already the newest version (1.14.6+repack-2). libhdf5-hl-cpp-310 set to manually installed. libavahi-common3 is already the newest version (0.8-18). libavahi-common3 set to manually installed. autotools-dev is already the newest version (20240727.1). autotools-dev set to manually installed. libgnutls-dane0t64 is already the newest version (3.8.12-3). libgnutls-dane0t64 set to manually installed. diffutils is already the newest version (1:3.12-1+b1). python3-typing-extensions is already the newest version (4.15.0-2). python3-typing-extensions set to manually installed. python3-setuptools is already the newest version (78.1.1-0.1). python3-setuptools set to manually installed. libglut-dev is already the newest version (3.4.0-6+b1). libglut-dev set to manually installed. libglx0 is already the newest version (1.7.0-3). libglx0 set to manually installed. liblzma-dev is already the newest version (5.8.2-2). liblzma-dev set to manually installed. libffi8 is already the newest version (3.5.2-4). libffi8 set to manually installed. libqt5test5t64 is already the newest version (5.15.17+dfsg-7+b1). libqt5test5t64 set to manually installed. libnghttp2-14 is already the newest version (1.68.1-1). libnghttp2-14 set to manually installed. libcairo2 is already the newest version (1.18.4-3). libcairo2 set to manually installed. libpotrace0 is already the newest version (1.16-2+b3). libpotrace0 set to manually installed. libsasl2-modules-db is already the newest version (2.1.28+dfsg1-10). libsasl2-modules-db set to manually installed. libuv1t64 is already the newest version (1.51.0-2+b1). libuv1t64 set to manually installed. libgnutls28-dev is already the newest version (3.8.12-3). libgnutls28-dev set to manually installed. perl-base is already the newest version (5.40.1-7). libglu1-mesa-dev is already the newest version (9.0.2-1.1+b4). libglu1-mesa-dev set to manually installed. g++-15 is already the newest version (15.2.0-16). g++-15 set to manually installed. libgudev-1.0-0 is already the newest version (238-7+b1). libgudev-1.0-0 set to manually installed. libsasl2-2 is already the newest version (2.1.28+dfsg1-10). libsasl2-2 set to manually installed. libkrb5-3 is already the newest version (1.22.1-2). libkrb5-3 set to manually installed. libxcb-randr0 is already the newest version (1.17.0-2+b2). libxcb-randr0 set to manually installed. libx11-xcb1 is already the newest version (2:1.8.13-1). libx11-xcb1 set to manually installed. libgssapi-krb5-2 is already the newest version (1.22.1-2). libgssapi-krb5-2 set to manually installed. libsm6 is already the newest version (2:1.2.6-1+b1). libsm6 set to manually installed. libxaw7 is already the newest version (2:1.0.16-1+b1). libxaw7 set to manually installed. binutils-common is already the newest version (2.46-3). binutils-common set to manually installed. libgmp-dev is already the newest version (2:6.3.0+dfsg-5+b1). libgmp-dev set to manually installed. libc-bin is already the newest version (2.42-14). libgraphite2-3 is already the newest version (1.3.14-13). libgraphite2-3 set to manually installed. libdb5.3t64 is already the newest version (5.3.28+dfsg2-11). libegl-mesa0 is already the newest version (26.0.4-1). libegl-mesa0 set to manually installed. libice6 is already the newest version (2:1.1.1-1+b1). libice6 set to manually installed. libgdbm6t64 is already the newest version (1.26-1+b1). libgdbm6t64 set to manually installed. libavahi-client3 is already the newest version (0.8-18). libavahi-client3 set to manually installed. openssl-provider-legacy is already the newest version (3.6.1-3). libselinux1 is already the newest version (3.9-4+b1). libpam0g is already the newest version (1.7.0-5+b1). libncursesw6 is already the newest version (6.6+20251231-1). libncursesw6 set to manually installed. dh-strip-nondeterminism is already the newest version (1.15.0-1). dh-strip-nondeterminism set to manually installed. libjpeg62-turbo-dev is already the newest version (1:2.1.5-4). libjpeg62-turbo-dev set to manually installed. gcc is already the newest version (4:15.2.0-5). gcc set to manually installed. pkgconf-bin is already the newest version (2.5.1-4). pkgconf-bin set to manually installed. libssh2-1t64 is already the newest version (1.11.1-2). libssh2-1t64 set to manually installed. libxcb-sync1 is already the newest version (1.17.0-2+b2). libxcb-sync1 set to manually installed. libdrm-amdgpu1 is already the newest version (2.4.131-1). libdrm-amdgpu1 set to manually installed. libbsd0 is already the newest version (0.12.2-2+b1). libbsd0 set to manually installed. libicu78 is already the newest version (78.3-1). libicu78 set to manually installed. libaudit1 is already the newest version (1:4.1.2-1+b1). libxcb-render-util0 is already the newest version (0.3.10-1+b1). libxcb-render-util0 set to manually installed. binutils is already the newest version (2.46-3). binutils set to manually installed. g++ is already the newest version (4:15.2.0-5). g++ set to manually installed. libngtcp2-crypto-ossl0 is already the newest version (1.21.0-1). libngtcp2-crypto-ossl0 set to manually installed. libpython3.13 is already the newest version (3.13.12-1). libpython3.13 set to manually installed. libqt5widgets5t64 is already the newest version (5.15.17+dfsg-7+b1). libqt5widgets5t64 set to manually installed. python3-jaraco.functools is already the newest version (4.1.0-1). python3-jaraco.functools set to manually installed. xtrans-dev is already the newest version (1.6.0-1). xtrans-dev set to manually installed. libdpkg-perl is already the newest version (1.23.7). libdpkg-perl set to manually installed. libsensors5 is already the newest version (1:3.6.2-2+b1). libsensors5 set to manually installed. libisl23 is already the newest version (0.27-2). libisl23 set to manually installed. libjpeg-dev is already the newest version (1:2.1.5-4). libjpeg-dev set to manually installed. dash is already the newest version (0.5.12-12+b1). libqt5gui5t64 is already the newest version (5.15.17+dfsg-7+b1). libqt5gui5t64 set to manually installed. libpython3-dev is already the newest version (3.13.9-3). libpython3-dev set to manually installed. libpython3.14-minimal is already the newest version (3.14.3-5). libpython3.14-minimal set to manually installed. libmpfi0 is already the newest version (1.5.4+ds-5). libmpfi0 set to manually installed. libgl1-mesa-dri is already the newest version (26.0.4-1). libgl1-mesa-dri set to manually installed. g++-aarch64-linux-gnu is already the newest version (4:15.2.0-5). g++-aarch64-linux-gnu set to manually installed. ucf is already the newest version (3.0053). ucf set to manually installed. gettext is already the newest version (0.23.2-2). gettext set to manually installed. perl is already the newest version (5.40.1-7). perl set to manually installed. intltool-debian is already the newest version (0.35.0+20060710.6). intltool-debian set to manually installed. po-debconf is already the newest version (1.0.22). po-debconf set to manually installed. libglx-dev is already the newest version (1.7.0-3). libglx-dev set to manually installed. libngtcp2-crypto-gnutls8 is already the newest version (1.21.0-1). libngtcp2-crypto-gnutls8 set to manually installed. x11proto-dev is already the newest version (2025.1-1). x11proto-dev set to manually installed. automake is already the newest version (1:1.18.1-4). automake set to manually installed. gcc-aarch64-linux-gnu is already the newest version (4:15.2.0-5). gcc-aarch64-linux-gnu set to manually installed. libqt5printsupport5t64 is already the newest version (5.15.17+dfsg-7+b1). libqt5printsupport5t64 set to manually installed. sensible-utils is already the newest version (0.0.26). sensible-utils set to manually installed. libbrotli1 is already the newest version (1.2.0-3). libbrotli1 set to manually installed. libxcb-dri3-0 is already the newest version (1.17.0-2+b2). libxcb-dri3-0 set to manually installed. librtmp1 is already the newest version (2.4+20151223.gitfa8646d.1-3+b1). librtmp1 set to manually installed. libmagic-mgc is already the newest version (1:5.46-5+b1). libmagic-mgc set to manually installed. libpcre2-8-0 is already the newest version (10.46-1+b1). libk5crypto3 is already the newest version (1.22.1-2). libk5crypto3 set to manually installed. libkdb5-10t64 is already the newest version (1.22.1-2). libkdb5-10t64 set to manually installed. grep is already the newest version (3.12-1+b1). libmd4c0 is already the newest version (0.5.2-2+b2). libmd4c0 set to manually installed. texlive-base is already the newest version (2025.20260124-1). texlive-base set to manually installed. libptexenc1 is already the newest version (2025.20250727.75242+ds-5+b2). libptexenc1 set to manually installed. libevdev2 is already the newest version (1.13.6+dfsg-1). libevdev2 set to manually installed. libtasn1-6-dev is already the newest version (4.21.0-2). libtasn1-6-dev set to manually installed. procps is already the newest version (2:4.0.4-9+b1). procps set to manually installed. libqt5xml5t64 is already the newest version (5.15.17+dfsg-7+b1). libqt5xml5t64 set to manually installed. krb5-multidev is already the newest version (1.22.1-2). krb5-multidev set to manually installed. libperl5.40 is already the newest version (5.40.1-7). libperl5.40 set to manually installed. libpng-dev is already the newest version (1.6.56-1). libpng-dev set to manually installed. hdf5-helpers is already the newest version (1.14.6+repack-2). hdf5-helpers set to manually installed. python3-pyqt5.sip is already the newest version (12.17.2-1). python3-pyqt5.sip set to manually installed. libdebconfclient0 is already the newest version (0.282+b2). libgcc-15-dev is already the newest version (15.2.0-16). libgcc-15-dev set to manually installed. libxml2-16 is already the newest version (2.15.2+dfsg-0.1). libxml2-16 set to manually installed. man-db is already the newest version (2.13.1-1+b1). man-db set to manually installed. libitm1 is already the newest version (16-20260322-1). libitm1 set to manually installed. python3 is already the newest version (3.13.9-3). python3 set to manually installed. media-types is already the newest version (14.0.0). media-types set to manually installed. python3.14-minimal is already the newest version (3.14.3-5). python3.14-minimal set to manually installed. libx11-dev is already the newest version (2:1.8.13-1). libx11-dev set to manually installed. libice-dev is already the newest version (2:1.1.1-1+b1). libice-dev set to manually installed. g++-15-aarch64-linux-gnu is already the newest version (15.2.0-16). g++-15-aarch64-linux-gnu set to manually installed. libopengl0 is already the newest version (1.7.0-3). libopengl0 set to manually installed. libjpeg62-turbo is already the newest version (1:2.1.5-4). libjpeg62-turbo set to manually installed. libgnutls30t64 is already the newest version (3.8.12-3). libgnutls30t64 set to manually installed. libxcb-xfixes0 is already the newest version (1.17.0-2+b2). libxcb-xfixes0 set to manually installed. python3.13-dev is already the newest version (3.13.12-1). python3.13-dev set to manually installed. fonts-lmodern is already the newest version (2.005-1). fonts-lmodern set to manually installed. libxext6 is already the newest version (2:1.3.4-1+b4). libxext6 set to manually installed. gcc-15-base is already the newest version (15.2.0-16). gcc-15-base set to manually installed. libqt5network5t64 is already the newest version (5.15.17+dfsg-7+b1). libqt5network5t64 set to manually installed. libmpfr6 is already the newest version (4.2.2-3). libmpfr6 set to manually installed. tar is already the newest version (1.35+dfsg-4). shared-mime-info is already the newest version (2.4-5+b4). shared-mime-info set to manually installed. gzip is already the newest version (1.13-1+b1). zlib1g is already the newest version (1:1.3.dfsg+really1.3.2-3). tzdata is already the newest version (2026a-3). tzdata set to manually installed. python3-zipp is already the newest version (3.23.0-1). python3-zipp set to manually installed. python3.14 is already the newest version (3.14.3-5). python3.14 set to manually installed. libgbm1 is already the newest version (26.0.4-1). libgbm1 set to manually installed. freeglut3-dev is already the newest version (3.4.0-6+b1). freeglut3-dev set to manually installed. cpp-aarch64-linux-gnu is already the newest version (4:15.2.0-5). cpp-aarch64-linux-gnu set to manually installed. libmd0 is already the newest version (1.1.0-2+b2). libqt5dbus5t64 is already the newest version (5.15.17+dfsg-7+b1). libqt5dbus5t64 set to manually installed. fonts-dejavu-mono is already the newest version (2.37-8). fonts-dejavu-mono set to manually installed. libsz2 is already the newest version (1.1.6-1). libsz2 set to manually installed. libtinfo6 is already the newest version (6.6+20251231-1). libxcb-image0 is already the newest version (0.4.0-2+b3). libxcb-image0 set to manually installed. python3-typeguard is already the newest version (4.4.4-2). python3-typeguard set to manually installed. libgfortran5 is already the newest version (16-20260322-1). libgfortran5 set to manually installed. libhdf5-fortran-310 is already the newest version (1.14.6+repack-2). libhdf5-fortran-310 set to manually installed. liblsan0 is already the newest version (16-20260322-1). liblsan0 set to manually installed. libgmp10 is already the newest version (2:6.3.0+dfsg-5+b1). xz-utils is already the newest version (5.8.2-2). xz-utils set to manually installed. python3-numpy-dev is already the newest version (1:2.3.5+ds-3). python3-numpy-dev set to manually installed. libglu1-mesa is already the newest version (9.0.2-1.1+b4). libglu1-mesa set to manually installed. python3-dev is already the newest version (3.13.9-3). python3-dev set to manually installed. libbinutils is already the newest version (2.46-3). libbinutils set to manually installed. mawk is already the newest version (1.3.4.20260302-1). libinput10 is already the newest version (1.31.0-1). libinput10 set to manually installed. libpcre2-16-0 is already the newest version (10.46-1+b1). libpcre2-16-0 set to manually installed. liblz4-1 is already the newest version (1.10.0-8). liblz4-1 set to manually installed. nettle-dev is already the newest version (3.10.2-1). nettle-dev set to manually installed. texlive-latex-base is already the newest version (2025.20260124-1). texlive-latex-base set to manually installed. libaec-dev is already the newest version (1.1.6-1). libaec-dev set to manually installed. libmtdev1t64 is already the newest version (1.1.7-1+b1). libmtdev1t64 set to manually installed. libxcb-xkb1 is already the newest version (1.17.0-2+b2). libxcb-xkb1 set to manually installed. libp11-kit-dev is already the newest version (0.26.2-2). libp11-kit-dev set to manually installed. libxxf86vm1 is already the newest version (1:1.1.4-2). libxxf86vm1 set to manually installed. tex-common is already the newest version (6.20). tex-common set to manually installed. libcrypt1 is already the newest version (1:4.5.1-1). libhdf5-dev is already the newest version (1.14.6+repack-2). libhdf5-dev set to manually installed. libpython3.14-dev is already the newest version (3.14.3-5). libpython3.14-dev set to manually installed. libxcb-xinerama0 is already the newest version (1.17.0-2+b2). libxcb-xinerama0 set to manually installed. libglew2.3 is already the newest version (2.3.1-3). libglew2.3 set to manually installed. libharfbuzz0b is already the newest version (12.3.2-2+b2). libharfbuzz0b set to manually installed. libxdmcp6 is already the newest version (1:1.1.5-2). libxdmcp6 set to manually installed. gcc-15 is already the newest version (15.2.0-16). gcc-15 set to manually installed. libattr1 is already the newest version (1:2.5.2-4). libudev1 is already the newest version (260.1-1). libmpc3 is already the newest version (1.3.1-3). libmpc3 set to manually installed. t1utils is already the newest version (1.41-4+b2). t1utils set to manually installed. base-files is already the newest version (14). libqt5core5t64 is already the newest version (5.15.17+dfsg-7+b1). libqt5core5t64 set to manually installed. libpixman-1-0 is already the newest version (0.46.4-1+b1). libpixman-1-0 set to manually installed. python3.13-minimal is already the newest version (3.13.12-1). python3.13-minimal set to manually installed. libpython3.14-stdlib is already the newest version (3.14.3-5). libpython3.14-stdlib set to manually installed. python3.14-dev is already the newest version 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already the newest version (8.2.3-12). libjs-sphinxdoc set to manually installed. libunbound8 is already the newest version (1.24.2-1). libunbound8 set to manually installed. libc-dev-bin is already the newest version (2.42-14). libc-dev-bin set to manually installed. libdbus-1-3 is already the newest version (1.16.2-4). libdbus-1-3 set to manually installed. libsm-dev is already the newest version (2:1.2.6-1+b1). libsm-dev set to manually installed. libkadm5clnt-mit12 is already the newest version (1.22.1-2). libkadm5clnt-mit12 set to manually installed. liblapack3 is already the newest version (3.12.1-7+b1). liblapack3 set to manually installed. libhdf5-cpp-310 is already the newest version (1.14.6+repack-2). libhdf5-cpp-310 set to manually installed. gcc-15-aarch64-linux-gnu is already the newest version (15.2.0-16). gcc-15-aarch64-linux-gnu set to manually installed. libhdf5-hl-fortran-310 is already the newest version (1.14.6+repack-2). libhdf5-hl-fortran-310 set to manually installed. libssl3t64 is already the newest version (3.6.1-3). build-essential is already the newest version (12.12). build-essential set to manually installed. libdebhelper-perl is already the newest version (13.31). libdebhelper-perl set to manually installed. linux-libc-dev is already the newest version (6.19.10-1). linux-libc-dev set to manually installed. libdouble-conversion3 is already the newest version (3.4.0-1). libdouble-conversion3 set to manually installed. libgssrpc4t64 is already the newest version (1.22.1-2). libgssrpc4t64 set to manually installed. libkeyutils1 is already the newest version (1.6.3-6+b1). libkeyutils1 set to manually installed. libwayland-client0 is already the newest version (1.24.0-2+b2). libwayland-client0 set to manually installed. libatomic1 is already the newest version (16-20260322-1). libatomic1 set to manually installed. libgl-dev is already the newest version (1.7.0-3). libgl-dev set to manually installed. libx11-6 is already the newest version (2:1.8.13-1). libx11-6 set to manually installed. libmagic1t64 is already the newest version (1:5.46-5+b1). libmagic1t64 set to manually installed. xkb-data is already the newest version (2.47-1). xkb-data set to manually installed. libglib2.0-0t64 is already the newest version (2.88.0-1). libglib2.0-0t64 set to manually installed. python3-all-dev is already the newest version (3.13.9-3). python3-all-dev set to manually installed. fontconfig is already the newest version (2.17.1-5). fontconfig set to manually installed. hostname is already the newest version (3.25+b1). base-passwd is already the newest version (3.6.8+b1). libarchive13t64 is already the newest version (3.8.5-1). libarchive13t64 set to manually installed. libtext-charwidth-perl is already the newest version (0.04-11+b5). libtext-charwidth-perl set to manually installed. libxpm4 is already the newest version (1:3.5.17-1+b4). libxpm4 set to manually installed. libngtcp2-16 is already the newest version (1.21.0-1). libngtcp2-16 set to manually installed. libglm-dev is already the newest version (1.0.1+ds-3). libglm-dev set to manually installed. libtasn1-6 is already the newest version (4.21.0-2). libtasn1-6 set to manually installed. libssl-dev is already the newest version (3.6.1-3). libssl-dev set to manually installed. libstdc++6 is already the newest version (16-20260322-1). libstdc++6 set to manually installed. libxcb1-dev is already the newest version (1.17.0-2+b2). libxcb1-dev set to manually installed. libxkbcommon0 is already the newest version (1.13.1-1). libxkbcommon0 set to manually installed. python3.13 is already the newest version (3.13.12-1). python3.13 set to manually installed. libnghttp3-9 is already the newest version (1.15.0-1). libnghttp3-9 set to manually installed. libdrm-common is already the newest version (2.4.131-1). libdrm-common set to manually installed. libmount1 is already the newest version (2.42-1). libxcb-icccm4 is already the newest version (0.4.2-1+b1). libxcb-icccm4 set to manually installed. libqt5help5 is already the newest version (5.15.17-4+b1). libqt5help5 set to manually installed. libglx-mesa0 is already the newest version (26.0.4-1). libglx-mesa0 set to manually installed. libasan8 is already the newest version (16-20260322-1). libasan8 set to manually installed. libuuid1 is already the newest version (2.42-1). libxau6 is already the newest version (1:1.0.11-1+b1). libxau6 set to manually installed. debhelper is already the newest version (13.31). debhelper set to manually installed. libarchive-zip-perl is already the newest version (1.68-1). libarchive-zip-perl set to manually installed. libxcb-util1 is already the newest version (0.4.1-1+b1). libxcb-util1 set to manually installed. libidn2-dev is already the newest version (2.3.8-4+b1). libidn2-dev set to manually installed. libuchardet0 is already the newest version (0.0.8-2+b1). libuchardet0 set to manually installed. fontconfig-config is already the newest version 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(5.15.11+dfsg-3). python3-pyqt5 set to manually installed. libgdbm-compat4t64 is already the newest version (1.26-1+b1). libgdbm-compat4t64 set to manually installed. librtmp-dev is already the newest version (2.4+20151223.gitfa8646d.1-3+b1). librtmp-dev set to manually installed. libqt5opengl5t64 is already the newest version (5.15.17+dfsg-7+b1). libqt5opengl5t64 set to manually installed. libqt5sql5t64 is already the newest version (5.15.17+dfsg-7+b1). libqt5sql5t64 set to manually installed. cpp-15 is already the newest version (15.2.0-16). cpp-15 set to manually installed. libxt6t64 is already the newest version (1:1.2.1-1.3+b1). libxt6t64 set to manually installed. libxrender1 is already the newest version (1:0.9.12-1+b1). libxrender1 set to manually installed. groff-base is already the newest version (1.23.0-10+b1). groff-base set to manually installed. libbrotli-dev is already the newest version (1.2.0-3). libbrotli-dev set to manually installed. libxml2-dev is already the newest version (2.15.2+dfsg-0.1). libxml2-dev set to manually installed. libsynctex2 is already the newest version (2025.20250727.75242+ds-5+b2). libsynctex2 set to manually installed. libnghttp3-dev is already the newest version (1.15.0-1). libnghttp3-dev set to manually installed. netbase is already the newest version (6.5). netbase set to manually installed. libkadm5srv-mit12 is already the newest version (1.22.1-2). libkadm5srv-mit12 set to manually installed. libjsoncpp26 is already the newest version (1.9.6-5). libjsoncpp26 set to manually installed. rpcsvc-proto is already the newest version (1.4.3-1+b2). rpcsvc-proto set to manually installed. libseccomp2 is already the newest version (2.6.0-2+b1). libseccomp2 set to manually installed. libpam-modules is already the newest version (1.7.0-5+b1). libglut3.12 is already the newest version (3.4.0-6+b1). libglut3.12 set to manually installed. libgcc-s1 is already the newest version (16-20260322-1). libnghttp2-dev is already the 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already the newest version (1.7.0-3). libopengl-dev set to manually installed. dh-python is already the newest version (7.20260309). dh-python set to manually installed. libxcb-keysyms1 is already the newest version (0.4.1-1+b1). libxcb-keysyms1 set to manually installed. libxmu6 is already the newest version (2:1.1.3-4). libxmu6 set to manually installed. libcap-ng0 is already the newest version (0.9.2-1). python3-jaraco.context is already the newest version (6.0.1-2). python3-jaraco.context set to manually installed. libjansson4 is already the newest version (2.14-2+b4). libjansson4 set to manually installed. libnettle8t64 is already the newest version (3.10.2-1). libnettle8t64 set to manually installed. libzzip-0-13t64 is already the newest version (0.13.78+dfsg.1-0.2). libzzip-0-13t64 set to manually installed. libpipeline1 is already the newest version (1.5.8-2). libpipeline1 set to manually installed. libx11-data is already the newest version (2:1.8.13-1). libx11-data set to manually installed. python3-inflect is already the newest version (7.5.0-1). python3-inflect set to manually installed. util-linux is already the newest version (2.42-1). libwacom9 is already the newest version (2.18.0-1). libwacom9 set to manually installed. libaudit-common is already the newest version (1:4.1.2-1). python3-all is already the newest version (3.13.9-3). python3-all set to manually installed. libpkgconf7 is already the newest version (2.5.1-4). libpkgconf7 set to manually installed. debconf is already the newest version (1.5.92). dh-autoreconf is already the newest version (22). dh-autoreconf set to manually installed. libcurl4t64 is already the newest version (8.19.0-3). libcurl4t64 set to manually installed. libedit2 is already the newest version (3.1-20251016-1). libedit2 set to manually installed. pkgconf is already the newest version (2.5.1-4). pkgconf set to manually installed. libbz2-1.0 is already the newest version (1.0.8-6+b1). libkrb5support0 is already the 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zlib1g-dev set to manually installed. libxcb-glx0 is already the newest version (1.17.0-2+b2). libxcb-glx0 set to manually installed. libevent-2.1-7t64 is already the newest version (2.1.12-stable-10+b2). libevent-2.1-7t64 set to manually installed. cmake is already the newest version (4.3.1-1). cmake set to manually installed. perl-modules-5.40 is already the newest version (5.40.1-7). perl-modules-5.40 set to manually installed. libhogweed6t64 is already the newest version (3.10.2-1). libhogweed6t64 set to manually installed. libegl1 is already the newest version (1.7.0-3). libegl1 set to manually installed. dpkg-dev is already the newest version (1.23.7). dpkg-dev set to manually installed. python3-autocommand is already the newest version (2.2.2-4). python3-autocommand set to manually installed. libpng16-16t64 is already the newest version (1.6.56-1). libpng16-16t64 set to manually installed. file is already the newest version (1:5.46-5+b1). file set to manually installed. 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manually installed. libllvm21 is already the newest version (1:21.1.8-7). libllvm21 set to manually installed. libhdf5-310 is already the newest version (1.14.6+repack-2). libhdf5-310 set to manually installed. m4 is already the newest version (1.4.21-1). m4 set to manually installed. libstdc++-15-dev is already the newest version (15.2.0-16). libstdc++-15-dev set to manually installed. python3-jaraco.text is already the newest version (4.0.0-1). python3-jaraco.text set to manually installed. init-system-helpers is already the newest version (1.69). libxkbcommon-x11-0 is already the newest version (1.13.1-1). libxkbcommon-x11-0 set to manually installed. libpython3.13-minimal is already the newest version (3.13.12-1). libpython3.13-minimal set to manually installed. sed is already the newest version (4.9-2+b2). libpaper2 is already the newest version (2.2.5-0.3+b3). libpaper2 set to manually installed. libxcb-shm0 is already the newest version (1.17.0-2+b2). libxcb-shm0 set to manually installed. libldap2 is already the newest version (2.6.10+dfsg-1+b1). libldap2 set to manually installed. ncurses-base is already the newest version (6.6+20251231-1). libinput-bin is already the newest version (1.31.0-1). libinput-bin set to manually installed. libpaper-utils is already the newest version (2.2.5-0.3+b3). libpaper-utils set to manually installed. libpsl5t64 is already the newest version (0.21.5-1). libpsl5t64 set to manually installed. libp11-kit0 is already the newest version (0.26.2-2). libp11-kit0 set to manually installed. libpython3.14 is already the newest version (3.14.3-5). libpython3.14 set to manually installed. sysvinit-utils is already the newest version (3.18-1). libtsan2 is already the newest version (16-20260322-1). libtsan2 set to manually installed. texlive-binaries is already the newest version (2025.20250727.75242+ds-5+b2). texlive-binaries set to manually installed. uuid-dev is already the newest version (2.42-1). uuid-dev set to manually installed. libelf1t64 is already the newest version (0.194-4). libelf1t64 set to manually installed. libcom-err2 is already the newest version (1.47.4-1). libcom-err2 set to manually installed. libgomp1 is already the newest version (16-20260322-1). libgomp1 set to manually installed. dpkg is already the newest version (1.23.7). libexpat1 is already the newest version (2.7.5-1). libexpat1 set to manually installed. libwacom-common is already the newest version (2.18.0-1). libwacom-common set to manually installed. libgmpxx4ldbl is already the newest version (2:6.3.0+dfsg-5+b1). libgmpxx4ldbl set to manually installed. libnetcdf22 is already the newest version (1:4.10.0-1). libnetcdf22 set to manually installed. libvulkan1 is already the newest version (1.4.341.0-1). libvulkan1 set to manually installed. fonts-dejavu-core is already the newest version (2.37-8). fonts-dejavu-core set to manually installed. libtexlua53-5 is already the newest version (2025.20250727.75242+ds-5+b2). libtexlua53-5 set to manually installed. python3-opengl is already the newest version (3.1.10+dfsg-1). python3-opengl set to manually installed. xorg-sgml-doctools is already the newest version (1:1.12.1-1). xorg-sgml-doctools set to manually installed. libqt5designer5 is already the newest version (5.15.17-4+b1). libqt5designer5 set to manually installed. x11-common is already the newest version (1:7.7+26). x11-common set to manually installed. autopoint is already the newest version (0.23.2-2). autopoint set to manually installed. debianutils is already the newest version (5.23.2+b1). gcc-16-base is already the newest version (16-20260322-1). comerr-dev is already the newest version (2.1-1.47.4-1). comerr-dev set to manually installed. libfontconfig1 is already the newest version (2.17.1-5). libfontconfig1 set to manually installed. libpython3-all-dev is already the newest version (3.13.9-3). libpython3-all-dev set to manually installed. autoconf is already the newest version (2.72-6). autoconf set to manually installed. libngtcp2-dev is already the newest version (1.21.0-1). libngtcp2-dev set to manually installed. libgl1 is already the newest version (1.7.0-3). libgl1 set to manually installed. python3-more-itertools is already the newest version (10.8.0-1). python3-more-itertools set to manually installed. libxi6 is already the newest version (2:1.8.2-2). libxi6 set to manually installed. libc6 is already the newest version (2.42-14). libz3-4 is already the newest version (4.13.3-1+b1). libz3-4 set to manually installed. libkpathsea6 is already the newest version (2025.20250727.75242+ds-5+b2). libkpathsea6 set to manually installed. libxcb-shape0 is already the newest version (1.17.0-2+b2). libxcb-shape0 set to manually installed. libtool is already the newest version (2.5.4-10). libtool set to manually installed. libxcb-present0 is already the newest version (1.17.0-2+b2). libxcb-present0 set to manually installed. libngtcp2-crypto-ossl-dev is already the newest version (1.21.0-1). libngtcp2-crypto-ossl-dev set to manually installed. xdg-utils is already the newest version (1.2.1-2). xdg-utils set to manually installed. libsystemd0 is already the newest version (260.1-1). libteckit0 is already the newest version (2.5.13+ds-1). libteckit0 set to manually installed. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: running --customize-hook in shell: sh -c 'chroot "$1" dpkg -r debootsnap-dummy' exec /srv/rebuilderd/tmp/mmdebstrap.2U9ag973B4 (Reading database ... 38348 files and directories currently installed.) Removing debootsnap-dummy (1.0) ... I: running --customize-hook in shell: sh -c 'chroot "$1" dpkg-query --showformat '${binary:Package}=${Version}\n' --show > "$1/pkglist"' exec /srv/rebuilderd/tmp/mmdebstrap.2U9ag973B4 I: running special hook: download /pkglist ./pkglist I: running --customize-hook in shell: sh -c 'rm "$1/pkglist"' exec /srv/rebuilderd/tmp/mmdebstrap.2U9ag973B4 I: running special hook: upload sources.list /etc/apt/sources.list I: waiting for background processes to finish... I: cleaning package lists and apt cache... I: skipping cleanup/reproducible as requested I: creating tarball... I: done I: removing tempdir /srv/rebuilderd/tmp/mmdebstrap.2U9ag973B4... I: success in 129.7425 seconds Downloading dependency 383 of 426: libpaper-utils:arm64=2.2.5-0.3+b3 Downloading dependency 384 of 426: libpsl5t64:arm64=0.21.5-1 Downloading dependency 385 of 426: libp11-kit0:arm64=0.26.2-2 Downloading dependency 386 of 426: libpython3.14:arm64=3.14.3-5 Downloading dependency 387 of 426: sysvinit-utils:arm64=3.18-1 Downloading dependency 388 of 426: libtsan2:arm64=16-20260322-1 Downloading dependency 389 of 426: texlive-binaries:arm64=2025.20250727.75242+ds-5+b2 Downloading dependency 390 of 426: uuid-dev:arm64=2.42-1 Downloading dependency 391 of 426: libelf1t64:arm64=0.194-4 Downloading dependency 392 of 426: libcom-err2:arm64=1.47.4-1 Downloading dependency 393 of 426: libgomp1:arm64=16-20260322-1 Downloading dependency 394 of 426: dpkg:arm64=1.23.7 Downloading dependency 395 of 426: libexpat1:arm64=2.7.5-1 Downloading dependency 396 of 426: libwacom-common:arm64=2.18.0-1 Downloading dependency 397 of 426: libgmpxx4ldbl:arm64=2:6.3.0+dfsg-5+b1 Downloading dependency 398 of 426: libnetcdf22:arm64=1:4.10.0-1 Downloading dependency 399 of 426: libvulkan1:arm64=1.4.341.0-1 Downloading dependency 400 of 426: fonts-dejavu-core:arm64=2.37-8 Downloading dependency 401 of 426: libtexlua53-5:arm64=2025.20250727.75242+ds-5+b2 Downloading dependency 402 of 426: python3-opengl:arm64=3.1.10+dfsg-1 Downloading dependency 403 of 426: xorg-sgml-doctools:arm64=1:1.12.1-1 Downloading dependency 404 of 426: libqt5designer5:arm64=5.15.17-4+b1 Downloading dependency 405 of 426: x11-common:arm64=1:7.7+26 Downloading dependency 406 of 426: autopoint:arm64=0.23.2-2 Downloading dependency 407 of 426: debianutils:arm64=5.23.2+b1 Downloading dependency 408 of 426: gcc-16-base:arm64=16-20260322-1 Downloading dependency 409 of 426: comerr-dev:arm64=2.1-1.47.4-1 Downloading dependency 410 of 426: libfontconfig1:arm64=2.17.1-5 Downloading dependency 411 of 426: libpython3-all-dev:arm64=3.13.9-3 Downloading dependency 412 of 426: autoconf:arm64=2.72-6 Downloading dependency 413 of 426: libngtcp2-dev:arm64=1.21.0-1 Downloading dependency 414 of 426: libgl1:arm64=1.7.0-3 Downloading dependency 415 of 426: python3-more-itertools:arm64=10.8.0-1 Downloading dependency 416 of 426: libxi6:arm64=2:1.8.2-2 Downloading dependency 417 of 426: libc6:arm64=2.42-14 Downloading dependency 418 of 426: libz3-4:arm64=4.13.3-1+b1 Downloading dependency 419 of 426: libkpathsea6:arm64=2025.20250727.75242+ds-5+b2 Downloading dependency 420 of 426: libxcb-shape0:arm64=1.17.0-2+b2 Downloading dependency 421 of 426: libtool:arm64=2.5.4-10 Downloading dependency 422 of 426: libxcb-present0:arm64=1.17.0-2+b2 Downloading dependency 423 of 426: libngtcp2-crypto-ossl-dev:arm64=1.21.0-1 Downloading dependency 424 of 426: xdg-utils:arm64=1.2.1-2 Downloading dependency 425 of 426: libsystemd0:arm64=260.1-1 Downloading dependency 426 of 426: libteckit0:arm64=2.5.13+ds-1 env --chdir=/srv/rebuilderd/tmp/rebuilderdnlMl6s/out DEB_BUILD_OPTIONS=parallel=8 LANG=C.UTF-8 LC_COLLATE=C.UTF-8 LC_CTYPE=C.UTF-8 SOURCE_DATE_EPOCH=1775243829 SBUILD_CONFIG=/srv/rebuilderd/tmp/debrebuildgab5fY/debrebuild.sbuildrc.5z7atyckLVss sbuild --build=arm64 --host=arm64 --arch-any --no-arch-all --binNMU-changelog= pymol (3.1.0+dfsg-1+b3) sid; urgency=low, binary-only=yes * Binary-only non-maintainer upload for arm64; no source changes. * Rebuild against libglew2.3 -- arm Build Daemon (arm-ubc-03) Fri, 03 Apr 2026 19:17:09 +0000 --chroot=/srv/rebuilderd/tmp/debrebuildgab5fY/debrebuild.tar.I2WUSGfNdk6n --chroot-mode=unshare --dist=unstable --no-run-lintian --no-run-piuparts --no-run-autopkgtest --no-apt-update --no-apt-upgrade --no-apt-distupgrade --no-source --verbose --nolog --bd-uninstallable-explainer= --build-path=/build/reproducible-path --dsc-dir=pymol-3.1.0+dfsg /srv/rebuilderd/tmp/rebuilderdnlMl6s/inputs/pymol_3.1.0+dfsg-1.dsc I: consider moving your ~/.sbuildrc to /srv/rebuilderd/.config/sbuild/config.pl The Debian buildds switched to the "unshare" backend and sbuild will default to it in the future. To start using "unshare" add this to your `~/.config/sbuild/config.pl`: $chroot_mode = "unshare"; If you want to keep the old "schroot" mode even in the future, add the following to your `~/.config/sbuild/config.pl`: $chroot_mode = "schroot"; $schroot = "schroot"; sbuild: warning: descr(l1): found blank line where expected first heading sbuild (Debian sbuild) 0.89.3+deb13u4 (28 December 2025) on codethink02-arm64 +==============================================================================+ | pymol 3.1.0+dfsg-1+b3 (arm64) Mon, 13 Apr 2026 12:01:42 +0000 | +==============================================================================+ Package: pymol Version: 3.1.0+dfsg-1+b3 Source Version: 3.1.0+dfsg-1 Distribution: unstable Machine Architecture: arm64 Host Architecture: arm64 Build Architecture: arm64 Build Type: any I: No tarballs found in /srv/rebuilderd/.cache/sbuild I: Unpacking /srv/rebuilderd/tmp/debrebuildgab5fY/debrebuild.tar.I2WUSGfNdk6n to /srv/rebuilderd/tmp/tmp.sbuild.65jO9u1WUt... I: Setting up the chroot... I: Creating chroot session... I: Setting up log color... I: Setting up apt archive... +------------------------------------------------------------------------------+ | Fetch source files Mon, 13 Apr 2026 12:01:52 +0000 | +------------------------------------------------------------------------------+ Local sources ------------- /srv/rebuilderd/tmp/rebuilderdnlMl6s/inputs/pymol_3.1.0+dfsg-1.dsc exists in /srv/rebuilderd/tmp/rebuilderdnlMl6s/inputs; copying to chroot sbuild: warning: descr(l1): found blank line where expected first heading +------------------------------------------------------------------------------+ | Install package build dependencies Mon, 13 Apr 2026 12:01:54 +0000 | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: cmake, debhelper-compat (= 13), dh-sequence-python3, freeglut3-dev, libfreetype-dev, libglew-dev, libglm-dev, libnetcdf-dev, libpng-dev, python3-all, python3-all-dev, python3-numpy, python3-opengl, python3-pyqt5, python3-pyqt5.qtopengl, python3-setuptools, texlive-latex-base, libxml2-dev, build-essential Filtered Build-Depends: cmake, debhelper-compat (= 13), dh-sequence-python3, freeglut3-dev, libfreetype-dev, libglew-dev, libglm-dev, libnetcdf-dev, libpng-dev, python3-all, python3-all-dev, python3-numpy, python3-opengl, python3-pyqt5, python3-pyqt5.qtopengl, python3-setuptools, texlive-latex-base, libxml2-dev, build-essential dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/build/reproducible-path/resolver-pVNhIV/apt_archive/sbuild-build-depends-main-dummy.deb'. Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies +------------------------------------------------------------------------------+ | Check architectures Mon, 13 Apr 2026 12:01:59 +0000 | +------------------------------------------------------------------------------+ Arch check ok (arm64 included in any all) +------------------------------------------------------------------------------+ | Build environment Mon, 13 Apr 2026 12:01:59 +0000 | +------------------------------------------------------------------------------+ Kernel: Linux 6.12.74+deb13+1-cloud-arm64 #1 SMP Debian 6.12.74-2 (2026-03-08) arm64 (aarch64) Toolchain package versions: binutils_2.46-3 dpkg-dev_1.23.7 g++-15_15.2.0-16 gcc-15_15.2.0-16 libc6-dev_2.42-14 libstdc++-15-dev_15.2.0-16 libstdc++6_16-20260322-1 linux-libc-dev_6.19.10-1 Package versions: autoconf_2.72-6 automake_1:1.18.1-4 autopoint_0.23.2-2 autotools-dev_20240727.1 base-files_14 base-passwd_3.6.8+b1 bash_5.3-2 binutils_2.46-3 binutils-aarch64-linux-gnu_2.46-3 binutils-common_2.46-3 bsdextrautils_2.42-1 build-essential_12.12 bzip2_1.0.8-6+b1 cmake_4.3.1-1 comerr-dev_2.1-1.47.4-1 coreutils_9.10-1 cpp_4:15.2.0-5 cpp-15_15.2.0-16 cpp-15-aarch64-linux-gnu_15.2.0-16 cpp-aarch64-linux-gnu_4:15.2.0-5 dash_0.5.12-12+b1 debconf_1.5.92 debhelper_13.31 debianutils_5.23.2+b1 dh-autoreconf_22 dh-python_7.20260309 dh-strip-nondeterminism_1.15.0-1 diffutils_1:3.12-1+b1 dpkg_1.23.7 dpkg-dev_1.23.7 dwz_0.16-4 file_1:5.46-5+b1 findutils_4.10.0-3+b1 fontconfig_2.17.1-5 fontconfig-config_2.17.1-5 fonts-dejavu-core_2.37-8 fonts-dejavu-mono_2.37-8 fonts-lmodern_2.005-1 freeglut3-dev_3.4.0-6+b1 g++_4:15.2.0-5 g++-15_15.2.0-16 g++-15-aarch64-linux-gnu_15.2.0-16 g++-aarch64-linux-gnu_4:15.2.0-5 gcc_4:15.2.0-5 gcc-15_15.2.0-16 gcc-15-aarch64-linux-gnu_15.2.0-16 gcc-15-base_15.2.0-16 gcc-16-base_16-20260322-1 gcc-aarch64-linux-gnu_4:15.2.0-5 gettext_0.23.2-2 gettext-base_0.23.2-2 grep_3.12-1+b1 groff-base_1.23.0-10+b1 gzip_1.13-1+b1 hdf5-helpers_1.14.6+repack-2 hostname_3.25+b1 init-system-helpers_1.69 intltool-debian_0.35.0+20060710.6 krb5-multidev_1.22.1-2 libacl1_2.3.2-3 libaec-dev_1.1.6-1 libaec0_1.1.6-1 libarchive-zip-perl_1.68-1 libarchive13t64_3.8.5-1 libasan8_16-20260322-1 libatomic1_16-20260322-1 libattr1_1:2.5.2-4 libaudit-common_1:4.1.2-1 libaudit1_1:4.1.2-1+b1 libavahi-client3_0.8-18 libavahi-common-data_0.8-18 libavahi-common3_0.8-18 libbinutils_2.46-3 libblas3_3.12.1-7+b1 libblkid1_2.42-1 libbrotli-dev_1.2.0-3 libbrotli1_1.2.0-3 libbsd0_0.12.2-2+b1 libbz2-1.0_1.0.8-6+b1 libbz2-dev_1.0.8-6+b1 libc-bin_2.42-14 libc-dev-bin_2.42-14 libc-gconv-modules-extra_2.42-14 libc6_2.42-14 libc6-dev_2.42-14 libcairo2_1.18.4-3 libcap-ng0_0.9.2-1 libcc1-0_16-20260322-1 libcom-err2_1.47.4-1 libcrypt1_1:4.5.1-1 libctf-nobfd0_2.46-3 libctf0_2.46-3 libcups2t64_2.4.16-1 libcurl3t64-gnutls_8.19.0-3 libcurl4-openssl-dev_8.19.0-3 libcurl4t64_8.19.0-3 libdb5.3t64_5.3.28+dfsg2-11 libdbus-1-3_1.16.2-4 libdebconfclient0_0.282+b2 libdebhelper-perl_13.31 libdouble-conversion3_3.4.0-1 libdpkg-perl_1.23.7 libdrm-amdgpu1_2.4.131-1 libdrm-common_2.4.131-1 libdrm2_2.4.131-1 libedit2_3.1-20251016-1 libegl-mesa0_26.0.4-1 libegl1_1.7.0-3 libelf1t64_0.194-4 libevdev2_1.13.6+dfsg-1 libevent-2.1-7t64_2.1.12-stable-10+b2 libexpat1_2.7.5-1 libexpat1-dev_2.7.5-1 libffi8_3.5.2-4 libfile-stripnondeterminism-perl_1.15.0-1 libfontconfig1_2.17.1-5 libfreetype-dev_2.14.3+dfsg-1 libfreetype6_2.14.3+dfsg-1 libgbm1_26.0.4-1 libgcc-15-dev_15.2.0-16 libgcc-s1_16-20260322-1 libgdbm-compat4t64_1.26-1+b1 libgdbm6t64_1.26-1+b1 libgfortran5_16-20260322-1 libgl-dev_1.7.0-3 libgl1_1.7.0-3 libgl1-mesa-dri_26.0.4-1 libgles2_1.7.0-3 libglew-dev_2.3.1-3 libglew2.3_2.3.1-3 libglib2.0-0t64_2.88.0-1 libglm-dev_1.0.1+ds-3 libglu1-mesa_9.0.2-1.1+b4 libglu1-mesa-dev_9.0.2-1.1+b4 libglut-dev_3.4.0-6+b1 libglut3.12_3.4.0-6+b1 libglvnd0_1.7.0-3 libglx-dev_1.7.0-3 libglx-mesa0_26.0.4-1 libglx0_1.7.0-3 libgmp-dev_2:6.3.0+dfsg-5+b1 libgmp10_2:6.3.0+dfsg-5+b1 libgmpxx4ldbl_2:6.3.0+dfsg-5+b1 libgnutls-dane0t64_3.8.12-3 libgnutls28-dev_3.8.12-3 libgnutls30t64_3.8.12-3 libgomp1_16-20260322-1 libgprofng0_2.46-3 libgraphite2-3_1.3.14-13 libgssapi-krb5-2_1.22.1-2 libgssrpc4t64_1.22.1-2 libgudev-1.0-0_238-7+b1 libharfbuzz0b_12.3.2-2+b2 libhdf5-310_1.14.6+repack-2 libhdf5-cpp-310_1.14.6+repack-2 libhdf5-dev_1.14.6+repack-2 libhdf5-fortran-310_1.14.6+repack-2 libhdf5-hl-310_1.14.6+repack-2 libhdf5-hl-cpp-310_1.14.6+repack-2 libhdf5-hl-fortran-310_1.14.6+repack-2 libhogweed6t64_3.10.2-1 libhwasan0_16-20260322-1 libice-dev_2:1.1.1-1+b1 libice6_2:1.1.1-1+b1 libicu78_78.3-1 libidn2-0_2.3.8-4+b1 libidn2-dev_2.3.8-4+b1 libinput-bin_1.31.0-1 libinput10_1.31.0-1 libisl23_0.27-2 libitm1_16-20260322-1 libjansson4_2.14-2+b4 libjpeg-dev_1:2.1.5-4 libjpeg62-turbo_1:2.1.5-4 libjpeg62-turbo-dev_1:2.1.5-4 libjs-sphinxdoc_8.2.3-12 libjsoncpp26_1.9.6-5 libk5crypto3_1.22.1-2 libkadm5clnt-mit12_1.22.1-2 libkadm5srv-mit12_1.22.1-2 libkdb5-10t64_1.22.1-2 libkeyutils1_1.6.3-6+b1 libkpathsea6_2025.20250727.75242+ds-5+b2 libkrb5-3_1.22.1-2 libkrb5-dev_1.22.1-2 libkrb5support0_1.22.1-2 liblapack3_3.12.1-7+b1 libldap-dev_2.6.10+dfsg-1+b1 libldap2_2.6.10+dfsg-1+b1 libllvm21_1:21.1.8-7 liblsan0_16-20260322-1 liblz4-1_1.10.0-8 liblzma-dev_5.8.2-2 liblzma5_5.8.2-2 libmagic-mgc_1:5.46-5+b1 libmagic1t64_1:5.46-5+b1 libmd0_1.1.0-2+b2 libmd4c0_0.5.2-2+b2 libmount1_2.42-1 libmpc3_1.3.1-3 libmpfi0_1.5.4+ds-5 libmpfr6_4.2.2-3 libmtdev1t64_1.1.7-1+b1 libncursesw6_6.6+20251231-1 libnetcdf-dev_1:4.10.0-1 libnetcdf22_1:4.10.0-1 libnettle8t64_3.10.2-1 libnghttp2-14_1.68.1-1 libnghttp2-dev_1.68.1-1 libnghttp3-9_1.15.0-1 libnghttp3-dev_1.15.0-1 libngtcp2-16_1.21.0-1 libngtcp2-crypto-gnutls8_1.21.0-1 libngtcp2-crypto-ossl-dev_1.21.0-1 libngtcp2-crypto-ossl0_1.21.0-1 libngtcp2-dev_1.21.0-1 libopengl-dev_1.7.0-3 libopengl0_1.7.0-3 libp11-kit-dev_0.26.2-2 libp11-kit0_0.26.2-2 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python3-jaraco.context_6.0.1-2 python3-jaraco.functools_4.1.0-1 python3-jaraco.text_4.0.0-1 python3-minimal_3.13.9-3 python3-more-itertools_10.8.0-1 python3-numpy_1:2.3.5+ds-3 python3-numpy-dev_1:2.3.5+ds-3 python3-opengl_3.1.10+dfsg-1 python3-pkg-resources_78.1.1-0.1 python3-pyqt5_5.15.11+dfsg-3 python3-pyqt5.qtopengl_5.15.11+dfsg-3 python3-pyqt5.sip_12.17.2-1 python3-setuptools_78.1.1-0.1 python3-typeguard_4.4.4-2 python3-typing-extensions_4.15.0-2 python3-zipp_3.23.0-1 python3.13_3.13.12-1 python3.13-dev_3.13.12-1 python3.13-minimal_3.13.12-1 python3.14_3.14.3-5 python3.14-dev_3.14.3-5 python3.14-minimal_3.14.3-5 readline-common_8.3-4 rpcsvc-proto_1.4.3-1+b2 sed_4.9-2+b2 sensible-utils_0.0.26 shared-mime-info_2.4-5+b4 sysvinit-utils_3.18-1 t1utils_1.41-4+b2 tar_1.35+dfsg-4 tex-common_6.20 texlive-base_2025.20260124-1 texlive-binaries_2025.20250727.75242+ds-5+b2 texlive-latex-base_2025.20260124-1 tzdata_2026a-3 ucf_3.0053 util-linux_2.42-1 uuid-dev_2.42-1 x11-common_1:7.7+26 x11proto-dev_2025.1-1 xdg-utils_1.2.1-2 xkb-data_2.47-1 xorg-sgml-doctools_1:1.12.1-1 xtrans-dev_1.6.0-1 xz-utils_5.8.2-2 zlib1g_1:1.3.dfsg+really1.3.2-3 zlib1g-dev_1:1.3.dfsg+really1.3.2-3 +------------------------------------------------------------------------------+ | Build Mon, 13 Apr 2026 12:01:59 +0000 | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: pymol Binary: pymol, python3-pymol, pymol-data Architecture: any all Version: 3.1.0+dfsg-1 Maintainer: Debichem Team Uploaders: Michael Banck Homepage: https://www.pymol.org Standards-Version: 4.7.0 Vcs-Browser: https://salsa.debian.org/debichem-team/pymol Vcs-Git: https://salsa.debian.org/debichem-team/pymol.git Testsuite: autopkgtest Build-Depends: cmake, debhelper-compat (= 13), dh-sequence-python3, freeglut3-dev, libfreetype-dev, libglew-dev, libglm-dev, libnetcdf-dev, libpng-dev, python3-all, python3-all-dev, python3-numpy, python3-opengl, python3-pyqt5, python3-pyqt5.qtopengl, python3-setuptools, texlive-latex-base, libxml2-dev Package-List: pymol deb science optional arch=all pymol-data deb science optional arch=all python3-pymol deb python optional arch=any Checksums-Sha1: 32396cf53f9409123ac32a96aa7fdc524e337bb7 21978280 pymol_3.1.0+dfsg.orig.tar.xz 124b693ee1a4e309066ec2f327837d5c2ab82978 57900 pymol_3.1.0+dfsg-1.debian.tar.xz Checksums-Sha256: dcd6d304e6865a618cab1d053ea470f09abcd716c429248d84de59f947102b1d 21978280 pymol_3.1.0+dfsg.orig.tar.xz 199a7e3227fba659093cda7cfdadca5ebc9dfd8233497d94bd9e30566bb1bb9a 57900 pymol_3.1.0+dfsg-1.debian.tar.xz Files: a2896da7deea2ffbd5c103d7e99f85ed 21978280 pymol_3.1.0+dfsg.orig.tar.xz a8321ad6758639dd10f3bc914b48c02d 57900 pymol_3.1.0+dfsg-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCAAdFiEEnKh3dJ+rLk+paGLs3GhqJ7Q0gbAFAmfX31cACgkQ3GhqJ7Q0 gbAoJg//XLGsbBmaD/gG5utd+whGm+GRPMMa2HGF4jEBJ0joO0rT4SCRZk7mhA8I 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dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-nonupload.pgp dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-maintainers.pgp dpkg-source: info: extracting pymol in /build/reproducible-path/pymol-3.1.0+dfsg dpkg-source: info: unpacking pymol_3.1.0+dfsg.orig.tar.xz dpkg-source: info: unpacking pymol_3.1.0+dfsg-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 03_povray.patch dpkg-source: info: applying 22_fix_pymol_import.patch dpkg-source: info: applying 27_fix_pymol_path_in_setup.patch dpkg-source: info: applying 28_no_data_install_in_python_path.patch dpkg-source: info: applying 31_fix_format-security.patch dpkg-source: info: applying 32_fix_spelling_lintian_warnings.patch dpkg-source: info: applying 33_fix_relative_paths_in_example_scripts.patch dpkg-source: info: applying 34_fix_examples_add_fetch_instead_of_load.patch dpkg-source: info: applying 40_mstop_movies.patch Check disk space ---------------- Sufficient free space for build Hack binNMU version ------------------- Created changelog entry for binNMU version 3.1.0+dfsg-1+b3 User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=8 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LC_COLLATE=C.UTF-8 LC_CTYPE=C.UTF-8 LOGNAME=sbuild PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SHELL=/bin/sh SOURCE_DATE_EPOCH=1775243829 USER=sbuild dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -us -uc -B dpkg-buildpackage: info: source package pymol dpkg-buildpackage: info: source version 3.1.0+dfsg-1+b3 dpkg-buildpackage: info: source distribution sid dpkg-buildpackage: info: source changed by arm Build Daemon (arm-ubc-03) dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean --buildsystem pybuild dh_auto_clean -O--buildsystem=pybuild I: pybuild base:385: python3.14 setup.py clean /usr/lib/python3/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated !! ******************************************************************************** Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). This deprecation is overdue, please update your project and remove deprecated calls to avoid build errors in the future. See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! corresp(dist, value, root_dir) running clean removing '/build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build' (and everything under it) 'build/bdist.linux-aarch64' does not exist -- can't clean it 'build/scripts-3.14' does not exist -- can't clean it I: pybuild base:385: python3.13 setup.py clean /usr/lib/python3/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated !! ******************************************************************************** Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). This deprecation is overdue, please update your project and remove deprecated calls to avoid build errors in the future. See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! corresp(dist, value, root_dir) running clean removing '/build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build' (and everything under it) 'build/bdist.linux-aarch64' does not exist -- can't clean it 'build/scripts-3.13' does not exist -- can't clean it dh_autoreconf_clean -O--buildsystem=pybuild debian/rules override_dh_clean make[1]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg' rm -f -r build test/tmp test/cmp generated dh_clean debian/pymol-ref-card.* \ Rules.make create_shadertext.pyc make[1]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg' debian/rules binary-arch dh binary-arch --buildsystem pybuild dh_update_autotools_config -a -O--buildsystem=pybuild dh_autoreconf -a -O--buildsystem=pybuild dh_auto_configure -a -O--buildsystem=pybuild I: pybuild base:385: python3.14 setup.py config /usr/lib/python3/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated !! ******************************************************************************** Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). This deprecation is overdue, please update your project and remove deprecated calls to avoid build errors in the future. See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! corresp(dist, value, root_dir) running config I: pybuild base:385: python3.13 setup.py config /usr/lib/python3/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated !! ******************************************************************************** Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). This deprecation is overdue, please update your project and remove deprecated calls to avoid build errors in the future. See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! corresp(dist, value, root_dir) running config dh_auto_build -a -O--buildsystem=pybuild I: pybuild base:385: /usr/bin/python3.14 setup.py build /usr/lib/python3/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated !! ******************************************************************************** Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). This deprecation is overdue, please update your project and remove deprecated calls to avoid build errors in the future. See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! corresp(dist, value, root_dir) running build running build_py creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/morphing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/computing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/seqalign.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/keyboard.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/shortcut.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/util.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/xwin.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/wizarding.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/diagnosing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/helping.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/povray.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/controlling.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/fitting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/preset.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/checking.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/querying.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/callback.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/parsing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/moving.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/editor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/shortcut_dict.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/internal.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/selector.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/viewing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/save_shortcut.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/completing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/selecting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/keywords.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/cgo.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/headering.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/movie.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/colorramping.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/cmd.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/invocation.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/colorprinting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/api.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/menu.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/editing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/rpc.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/cgobuilder.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/experimenting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/parser.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/mpeg_encode.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/__main__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/creating.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/setting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/shortcut_manager.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/_gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/locking.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/exporting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/constants.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/xray.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/externing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/lazyio.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/monitoring.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/pymolhttpd.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/feedingback.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/constants_palette.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/importing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/commanding.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol copying modules/pymol/vfont.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol2 copying modules/pymol2/cmd2.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol2 copying modules/pymol2/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol2 creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt copying modules/pmg_qt/file_dialogs.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt copying modules/pmg_qt/shortcut_menu_gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt copying modules/pmg_qt/advanced_settings_gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt copying modules/pmg_qt/scene_bin_gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt copying modules/pmg_qt/pymol_gl_widget.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt copying modules/pmg_qt/volume.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt copying modules/pmg_qt/properties_dialog.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt copying modules/pmg_qt/builder.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt copying modules/pmg_qt/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt copying modules/pmg_qt/mimic_pmg_tk.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt copying modules/pmg_qt/mimic_tk.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt copying modules/pmg_qt/keymapping.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt copying modules/pmg_qt/TextEditor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt copying modules/pmg_qt/pymol_qt_gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk copying modules/pmg_tk/SetEditor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk copying modules/pmg_tk/PMGApp.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk copying modules/pmg_tk/volume.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk copying modules/pmg_tk/PyMOLMapLoad.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk copying modules/pmg_tk/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk copying modules/pmg_tk/ColorEditor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk copying modules/pmg_tk/TextEditor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk copying modules/pmg_tk/Setting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk copying modules/pmg_tk/Demo.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/place.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/bond_mmff.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/protein_residues.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/charge.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/mae.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/protein_amber99.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/water_residues.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/xyz.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/arc.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/pkl.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/gms.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/io.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/dictdb.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/lst.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/cif.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/mass.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/protein_amber.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/sdf.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/models.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/map.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/cc1.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/gamess1.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/bonds.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/water_amber.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/pdb.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/cpv.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/mol2.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/mol.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/brick.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/hetatm.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/bond_amber.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/solvate.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/neighbor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/mmd.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/protein.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy copying modules/chempy/protein_mmff.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard copying modules/pymol/wizard/sculpting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard copying modules/pymol/wizard/filter.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard copying modules/pymol/wizard/dragging.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard copying modules/pymol/wizard/nucmutagenesis.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard copying modules/pymol/wizard/charge.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard copying modules/pymol/wizard/distance.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard copying modules/pymol/wizard/command.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard copying modules/pymol/wizard/toggle.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard copying modules/pymol/wizard/message.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard copying modules/pymol/wizard/label.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard copying modules/pymol/wizard/cleanup.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard copying modules/pymol/wizard/density.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard copying modules/pymol/wizard/pair_fit.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard copying modules/pymol/wizard/benchmark.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard copying modules/pymol/wizard/box.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard copying modules/pymol/wizard/annotation.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard copying modules/pymol/wizard/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard copying modules/pymol/wizard/renaming.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard copying modules/pymol/wizard/measurement.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard copying modules/pymol/wizard/mutagenesis.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard copying modules/pymol/wizard/pseudoatom.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard copying modules/pymol/wizard/appearance.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard copying modules/pymol/wizard/openvr.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard copying modules/pymol/wizard/stereodemo.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard copying modules/pymol/wizard/demo.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard copying modules/pymol/wizard/security.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/plugins copying modules/pymol/plugins/repository.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/plugins copying modules/pymol/plugins/installation.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/plugins copying modules/pymol/plugins/legacysupport.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/plugins copying modules/pymol/plugins/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/plugins copying modules/pymol/plugins/managergui_qt.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/plugins copying modules/pymol/plugins/managergui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/plugins creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/Qt copying modules/pymol/Qt/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/Qt copying modules/pymol/Qt/utils.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/Qt creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/stereochemistry copying modules/pymol/stereochemistry/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/stereochemistry creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/syntax copying modules/pmg_qt/syntax/pmlparser.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/syntax copying modules/pmg_qt/syntax/python.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/syntax copying modules/pmg_qt/syntax/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/syntax copying modules/pmg_qt/syntax/pml.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/syntax creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/web/examples copying modules/web/examples/justhttpd.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/web/examples copying modules/web/examples/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/web/examples creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk/skins copying modules/pmg_tk/skins/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk/skins creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk/startup copying modules/pmg_tk/startup/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk/startup creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk/skins/normal copying modules/pmg_tk/skins/normal/ModalWindow.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk/skins/normal copying modules/pmg_tk/skins/normal/builder.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk/skins/normal copying modules/pmg_tk/skins/normal/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk/skins/normal creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk/skins/demo copying modules/pmg_tk/skins/demo/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk/skins/demo creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/fast copying modules/chempy/fast/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/fast creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/bmin copying modules/chempy/bmin/util.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/bmin copying modules/chempy/bmin/state.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/bmin copying modules/chempy/bmin/realtime.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/bmin copying modules/chempy/bmin/commands.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/bmin copying modules/chempy/bmin/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/bmin creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/tinker copying modules/chempy/tinker/amber.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/tinker copying modules/chempy/tinker/state.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/tinker copying modules/chempy/tinker/realtime.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/tinker copying modules/chempy/tinker/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/tinker copying modules/chempy/tinker/keyword.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/tinker creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/mmtf copying modules/chempy/mmtf/io.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/mmtf copying modules/chempy/mmtf/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/mmtf creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/champ copying modules/chempy/champ/assign.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/champ copying modules/chempy/champ/amber99.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/champ copying modules/chempy/champ/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/champ copying modules/chempy/champ/formal_charges.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/champ creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/fragments copying modules/chempy/fragments/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/fragments running egg_info creating modules/pymol.egg-info writing modules/pymol.egg-info/PKG-INFO /usr/lib/python3/dist-packages/setuptools/_core_metadata.py:163: SetuptoolsDeprecationWarning: Invalid config. !! ******************************************************************************** newlines are not allowed in `summary` and will break in the future ******************************************************************************** !! write_field('Summary', single_line(summary)) writing dependency_links to modules/pymol.egg-info/dependency_links.txt writing entry points to modules/pymol.egg-info/entry_points.txt writing requirements to modules/pymol.egg-info/requires.txt writing top-level names to modules/pymol.egg-info/top_level.txt writing manifest file 'modules/pymol.egg-info/SOURCES.txt' reading manifest file 'modules/pymol.egg-info/SOURCES.txt' adding license file 'LICENSE' adding license file 'AUTHORS' writing manifest file 'modules/pymol.egg-info/SOURCES.txt' copying modules/pmg_qt/forms/render.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/save_object.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/create_shortcut.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/change_confirm.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/load_aln.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/load_traj.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/png.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/load_map.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/shortcut_menu.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/colors.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/pluginitem.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/props.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/askpartial.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/fetch.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/load_mae.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/load_mtz.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/save_molecule.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/pluginmanager.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/movieexport.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/help_shortcut.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms running build_ext cmake /build/reproducible-path/pymol-3.1.0+dfsg -DTARGET_NAME=_cmd -DCMAKE_LIBRARY_OUTPUT_DIRECTORY=/build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol -DCMAKE_BUILD_TYPE=Release -DALL_INC_DIR=include;contrib/uiuc/plugins/include;ov/src;layer0;layer1;layer2;layer3;layer4;layer5;build/generated;contrib/uiuc/plugins/molfile_plugin/src;/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include;/usr/include;/usr/include/freetype2;/usr/include/libxml2;/usr/include/python3.14;/usr/include/python3.14; -DALL_SRC=build/generated/ShaderText.cpp;contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c;contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c;contrib/uiuc/plugins/molfile_plugin/src/avsplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.c;contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c;contrib/uiuc/plugins/molfile_plugin/src/biomoccaplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/carplugin.c;contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/corplugin.c;contrib/uiuc/plugins/molfile_plugin/src/crdplugin.c;contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c;contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c;contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/dxplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c;contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/grdplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/hash.c;contrib/uiuc/plugins/molfile_plugin/src/inthash.c;contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c;contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/mapplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c;contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c;contrib/uiuc/plugins/molfile_plugin/src/netcdfplugin.c;contrib/uiuc/plugins/molfile_plugin/src/offplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c;contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c;contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c;contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c;contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c;contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c;layer0/Bezier.cpp;layer0/Block.cpp;layer0/CarveHelper.cpp;layer0/ContourSurf.cpp;layer0/Crystal.cpp;layer0/Err.cpp;layer0/Feedback.cpp;layer0/Field.cpp;layer0/File.cpp;layer0/GFXManager.cpp;layer0/GenericBuffer.cpp;layer0/GraphicsUtil.cpp;layer0/Isosurf.cpp;layer0/Map.cpp;layer0/Match.cpp;layer0/Matrix.cpp;layer0/MemoryDebug.cpp;layer0/MemoryUsage.cpp;layer0/MyPNG.cpp;layer0/Parse.cpp;layer0/Pixmap.cpp;layer0/PostProcess.cpp;layer0/PrintUtils.cpp;layer0/ShaderMgr.cpp;layer0/ShaderPreprocessor.cpp;layer0/ShaderPrg.cpp;layer0/Sphere.cpp;layer0/TTT.cpp;layer0/Tetsurf.cpp;layer0/Texture.cpp;layer0/Tracker.cpp;layer0/Triangle.cpp;layer0/Util.cpp;layer0/Util2.cpp;layer0/Vector.cpp;layer0/Word.cpp;layer0/ccealignmodule.cpp;layer0/marching_cubes.cpp;layer0/os_gl.cpp;layer1/Basis.cpp;layer1/ButMode.cpp;layer1/CGO.cpp;layer1/CGOGL.cpp;layer1/CGORenderer.cpp;layer1/COLLADA.cpp;layer1/Camera.cpp;layer1/Character.cpp;layer1/Color.cpp;layer1/Control.cpp;layer1/Extrude.cpp;layer1/Font.cpp;layer1/FontGLUT.cpp;layer1/FontGLUT8x13.cpp;layer1/FontGLUT9x15.cpp;layer1/FontGLUTHel10.cpp;layer1/FontGLUTHel12.cpp;layer1/FontGLUTHel18.cpp;layer1/FontType.cpp;layer1/ImageUtils.cpp;layer1/Movie.cpp;layer1/Ortho.cpp;layer1/P.cpp;layer1/PConv.cpp;layer1/Picking.cpp;layer1/Pop.cpp;layer1/PyMOLObject.cpp;layer1/Ray.cpp;layer1/Rep.cpp;layer1/Scene.cpp;layer1/SceneMouse.cpp;layer1/ScenePicking.cpp;layer1/SceneRay.cpp;layer1/SceneRender.cpp;layer1/SceneView.cpp;layer1/ScrollBar.cpp;layer1/Seq.cpp;layer1/Setting.cpp;layer1/Shaker.cpp;layer1/SymOp.cpp;layer1/SymOpPConv.cpp;layer1/SymOpTools.cpp;layer1/Symmetry.cpp;layer1/Text.cpp;layer1/TypeFace.cpp;layer1/View.cpp;layer1/Wizard.cpp;layer2/AssemblyHelpers.cpp;layer2/AtomInfo.cpp;layer2/AtomInfoHistory.cpp;layer2/BondTypeHistory.cpp;layer2/CifFile.cpp;layer2/CifMoleculeReader.cpp;layer2/CoordSet.cpp;layer2/DistSet.cpp;layer2/GadgetSet.cpp;layer2/HydrogenAdder.cpp;layer2/MmodTyping.cpp;layer2/MmtfMoleculeReader.cpp;layer2/Mol2Typing.cpp;layer2/MolV3000.cpp;layer2/ObjectAlignment.cpp;layer2/ObjectCGO.cpp;layer2/ObjectCallback.cpp;layer2/ObjectCurve.cpp;layer2/ObjectDist.cpp;layer2/ObjectGadget.cpp;layer2/ObjectGadgetRamp.cpp;layer2/ObjectGroup.cpp;layer2/ObjectMap.cpp;layer2/ObjectMesh.cpp;layer2/ObjectMolecule.cpp;layer2/ObjectMolecule2.cpp;layer2/ObjectMolecule3.cpp;layer2/ObjectSlice.cpp;layer2/ObjectSurface.cpp;layer2/ObjectVolume.cpp;layer2/RepAngle.cpp;layer2/RepCartoon.cpp;layer2/RepCylBond.cpp;layer2/RepDihedral.cpp;layer2/RepDistDash.cpp;layer2/RepDistLabel.cpp;layer2/RepDot.cpp;layer2/RepEllipsoid.cpp;layer2/RepLabel.cpp;layer2/RepMesh.cpp;layer2/RepNonbonded.cpp;layer2/RepNonbondedSphere.cpp;layer2/RepRibbon.cpp;layer2/RepSphere.cpp;layer2/RepSphereGenerate.cpp;layer2/RepSphereImmediate.cpp;layer2/RepSurface.cpp;layer2/RepWireBond.cpp;layer2/Sculpt.cpp;layer2/SculptCache.cpp;layer2/SideChainHelper.cpp;layer2/VFont.cpp;layer3/AtomIterators.cpp;layer3/CifDataValueFormatter.cpp;layer3/Editor.cpp;layer3/Executive.cpp;layer3/ExecutivePython.cpp;layer3/Interactions.cpp;layer3/MaeExportHelpers.cpp;layer3/MoleculeExporter.cpp;layer3/MovieScene.cpp;layer3/PlugIOManager.cpp;layer3/RingFinder.cpp;layer3/Seeker.cpp;layer3/Selector.cpp;layer3/SelectorTmp.cpp;layer3/SpecRec.cpp;layer3/SpecRecSpecial.cpp;layer4/Cmd.cpp;layer4/Menu.cpp;layer4/PopUp.cpp;layer5/PyMOL.cpp;layer5/TestPyMOL.cpp;layer5/main.cpp;ov/src/OVContext.cpp;ov/src/OVHeap.cpp;ov/src/OVHeapArray.cpp;ov/src/OVLexicon.cpp;ov/src/OVOneToAny.cpp;ov/src/OVOneToOne.cpp;ov/src/OVRandom.cpp;ov/src/ov_utility.cpp; -DALL_DEF=_PYMOL_LIBPNG;_PYMOL_FREETYPE;PYMOL_OPENMP;_PYMOL_VMD_PLUGINS;_HAVE_LIBXML;_PYMOL_NO_MSGPACKC;_PYMOL_NO_MAIN;_PYMOL_NUMPY; -DALL_LIB_DIR=/usr/lib; -DALL_LIB=png;freetype;xml2;GL;GLEW;netcdf; -DALL_COMP_ARGS=-Werror=return-type;-Wunused-variable;-Wno-switch;-Wno-narrowing;-Wno-char-subscripts;-O3;-fopenmp; -DALL_EXT_LINK=-fopenmp -DSHARED_SUFFIX=.cpython-314-aarch64-linux-gnu.so -- The C compiler identification is GNU 15.2.0 -- The CXX compiler identification is GNU 15.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Configuring done (0.9s) -- Generating done (0.1s) -- Build files have been written to: /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd cmake --build . --config Release -j12 gmake[1]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd' /usr/bin/cmake -S/build/reproducible-path/pymol-3.1.0+dfsg -B/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd/CMakeFiles /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[2]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd' /usr/bin/gmake -f CMakeFiles/_cmd.dir/build.make CMakeFiles/_cmd.dir/depend gmake[3]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd' cd /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/pymol-3.1.0+dfsg /build/reproducible-path/pymol-3.1.0+dfsg /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd/CMakeFiles/_cmd.dir/DependInfo.cmake "--color=" _cmd gmake[3]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd' /usr/bin/gmake -f CMakeFiles/_cmd.dir/build.make CMakeFiles/_cmd.dir/build gmake[3]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd' [ 0%] Building CXX object CMakeFiles/_cmd.dir/build/generated/ShaderText.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/build/generated/ShaderText.cpp.o -MF CMakeFiles/_cmd.dir/build/generated/ShaderText.cpp.o.d -o CMakeFiles/_cmd.dir/build/generated/ShaderText.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/build/generated/ShaderText.cpp [ 1%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c.o [ 1%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c.o [ 2%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.c.o [ 2%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/avsplugin.cpp.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat 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-I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c.o.d 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CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/crdplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/crdplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/crdplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/crdplugin.c [ 5%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 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-fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c [ 7%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src 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-I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/hash.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/hash.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/hash.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/hash.c [ 11%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/inthash.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 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CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/mapplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/mapplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/mapplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/mapplugin.cpp [ 13%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 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CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp [ 14%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 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CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c [ 15%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.cpp [ 16%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/netcdfplugin.c.o /usr/bin/cc -DPYMOL_OPENMP 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/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp [ 17%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp [ 17%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp [ 18%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp: In function ‘int {anonymous}::write_structure(void*, int, const molfile_atom_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp:1904:9: warning: unused variable ‘last_ctnumber’ [-Wunused-variable] 1904 | int last_ctnumber = -1; | ^~~~~~~~~~~~~ [ 18%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp: In function ‘int getUniqueResID(char*, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:443:7: warning: unused variable ‘i’ [-Wunused-variable] 443 | int i, uid; | ^ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp: In function ‘int parseStructureFaster(molfile_atom_t*, int*, pdbxParser*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:484:47: warning: unused variable ‘j’ [-Wunused-variable] 484 | int i, count, atomdata, pos, idx, xyzcount, j; | ^ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:503:8: warning: unused variable ‘oldChain’ [-Wunused-variable] 503 | char oldChain[8]; | ^~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp: In function ‘bool readAngleBonds(molfile_atom_t*, pdbxParser*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:803:7: warning: unused variable ‘bondTable’ [-Wunused-variable] 803 | int bondTable[32]; | ^~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:807:15: warning: unused variable ‘j’ [-Wunused-variable] 807 | int i, pos, j, k; | ^ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:811:8: warning: unused variable ‘modelNum’ [-Wunused-variable] 811 | char modelNum[8]; | ^~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:822:20: warning: unused variable ‘atom’ [-Wunused-variable] 822 | molfile_atom_t * atom; | ^~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:884:7: warning: unused variable ‘test’ [-Wunused-variable] 884 | int test = parser->nbonds + bnum; | ^~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp: In function ‘bool readRMSDBonds(molfile_atom_t*, pdbxParser*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:984:7: warning: unused variable ‘bondTable’ [-Wunused-variable] 984 | int bondTable[32]; | ^~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:988:15: warning: unused variable ‘j’ [-Wunused-variable] 988 | int i, pos, j, k; | ^ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:991:8: warning: unused variable ‘modelNum’ [-Wunused-variable] 991 | char modelNum[8]; | ^~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:1002:20: warning: unused variable ‘atom’ [-Wunused-variable] 1002 | molfile_atom_t * atom; | ^~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp: In function ‘void* open_file_write(const char*, const char*, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:1409:9: warning: unused variable ‘fd’ [-Wunused-variable] 1409 | FILE* fd; | ^~ [ 18%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp [ 19%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp [ 19%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp.o [ 20%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp [ 20%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c [ 21%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.cpp [ 21%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c [ 21%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp [ 22%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp In file included from /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp:30: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/ply_c.h: In function ‘void put_element_ply(PlyFile*, void*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:459:7: warning: unused variable ‘i’ [-Wunused-variable] 459 | int i,j,k; | ^ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/ply_c.h: In function ‘void ascii_get_element(PlyFile*, char*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1407:7: warning: unused variable ‘i’ [-Wunused-variable] 1407 | int i,j,k; | ^ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/ply_c.h: In function ‘void binary_get_element(PlyFile*, char*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1541:7: warning: unused variable ‘i’ [-Wunused-variable] 1541 | int i,j,k; | ^ [ 22%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp [ 23%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c [ 23%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp.o /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/ply_c.h: In function ‘char* recreate_command_line(int, char**)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1334:11: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 1334 | line[0] = '\0'; | ~~~~~~~~^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1333:26: note: destination object of size 0 allocated by ‘malloc’ 1333 | line = (char *) malloc (sizeof(char) * len); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~ /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 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CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp [ 24%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 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-I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c [ 24%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML 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-fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c [ 25%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include 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CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c [ 25%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 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CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c [ 26%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated 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CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 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-D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp [ 28%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src 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CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c [ 29%] Building CXX object CMakeFiles/_cmd.dir/layer0/Bezier.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Bezier.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Bezier.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Bezier.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Bezier.cpp [ 29%] Building CXX object CMakeFiles/_cmd.dir/layer0/Block.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Block.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Block.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Block.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Block.cpp [ 29%] Building CXX object CMakeFiles/_cmd.dir/layer0/CarveHelper.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 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function ‘vtf_read_bonds’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c:147:48: warning: ‘%s’ directive argument is null [-Wformat-overflow=] 147 | sprintf(message, "vtfplugin:%d: error: %s: \"%s\"\n", | ^~ [ 30%] Building CXX object CMakeFiles/_cmd.dir/layer0/ContourSurf.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 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-D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Crystal.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Crystal.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Crystal.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Crystal.cpp [ 31%] Building CXX object CMakeFiles/_cmd.dir/layer0/Err.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Err.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Err.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Err.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Err.cpp /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘std::string framefile(const std::string&, size_t, size_t, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:675:35: warning: ‘sprintf’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 675 | sprintf(answer, "%03x/", d1); | ^ In function ‘std::string DDreldir(const std::string&, int, int)’, inlined from ‘std::string framefile(const std::string&, size_t, size_t, int, int)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:779:23: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:675:20: note: ‘sprintf’ output between 5 and 10 bytes into a destination of size 9 675 | sprintf(answer, "%03x/", d1); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘std::string framefile(const std::string&, size_t, size_t, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:673:35: warning: ‘%03x’ directive writing between 3 and 8 bytes into a region of size between 0 and 5 [-Wformat-overflow=] 673 | sprintf(answer, "%03x/%03x/", d1, d2); | ^~~~ In function ‘std::string DDreldir(const std::string&, int, int)’, inlined from ‘std::string framefile(const std::string&, size_t, size_t, int, int)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:779:23: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:673:29: note: directive argument in the range [0, 2147483646] 673 | sprintf(answer, "%03x/%03x/", d1, d2); | ^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:673:20: note: ‘sprintf’ output between 9 and 19 bytes into a destination of size 9 673 | sprintf(answer, "%03x/%03x/", d1, d2); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 31%] Building CXX object CMakeFiles/_cmd.dir/layer0/Feedback.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Feedback.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Feedback.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Feedback.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.cpp [ 32%] Building CXX object CMakeFiles/_cmd.dir/layer0/Field.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Field.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Field.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Field.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Field.cpp /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘void DDmkdir(const std::string&, mode_t, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:714:23: warning: ‘%03x’ directive writing between 3 and 8 bytes into a region of size 6 [-Wformat-overflow=] 714 | sprintf(sub, "%03x/", i); | ^~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:714:22: note: directive argument in the range [0, 2147483646] 714 | sprintf(sub, "%03x/", i); | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:714:16: note: ‘sprintf’ output between 5 and 10 bytes into a destination of size 6 714 | sprintf(sub, "%03x/", i); | ~~~~~~~^~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:722:30: warning: ‘%03x’ directive writing between 3 and 8 bytes into a region of size 6 [-Wformat-overflow=] 722 | sprintf(subsub, "%03x", j); | ^~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:722:29: note: directive argument in the range [0, 2147483646] 722 | sprintf(subsub, "%03x", j); | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:722:20: note: ‘sprintf’ output between 4 and 9 bytes into a destination of size 6 722 | sprintf(subsub, "%03x", j); | ~~~~~~~^~~~~~~~~~~~~~~~~~~ [ 32%] Building CXX object CMakeFiles/_cmd.dir/layer0/File.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include 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-fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/File.cpp.o -MF CMakeFiles/_cmd.dir/layer0/File.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/File.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/File.cpp [ 32%] Building CXX object CMakeFiles/_cmd.dir/layer0/GFXManager.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/GFXManager.cpp.o -MF CMakeFiles/_cmd.dir/layer0/GFXManager.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/GFXManager.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/GFXManager.cpp [ 33%] Building CXX object CMakeFiles/_cmd.dir/layer0/GenericBuffer.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/GenericBuffer.cpp.o -MF CMakeFiles/_cmd.dir/layer0/GenericBuffer.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/GenericBuffer.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/GenericBuffer.cpp [ 33%] Building CXX object CMakeFiles/_cmd.dir/layer0/GraphicsUtil.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 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-Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Isosurf.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Isosurf.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Isosurf.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Isosurf.cpp [ 34%] Building CXX object CMakeFiles/_cmd.dir/layer0/Map.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 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-D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Match.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Match.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Match.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Match.cpp [ 35%] Building CXX object CMakeFiles/_cmd.dir/layer0/Matrix.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Matrix.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Matrix.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Matrix.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Matrix.cpp [ 35%] Building CXX object CMakeFiles/_cmd.dir/layer0/MemoryDebug.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/MemoryDebug.cpp.o -MF CMakeFiles/_cmd.dir/layer0/MemoryDebug.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/MemoryDebug.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/MemoryDebug.cpp [ 36%] Building CXX object CMakeFiles/_cmd.dir/layer0/MemoryUsage.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/MemoryUsage.cpp.o -MF CMakeFiles/_cmd.dir/layer0/MemoryUsage.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/MemoryUsage.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/MemoryUsage.cpp [ 36%] Building CXX object CMakeFiles/_cmd.dir/layer0/MyPNG.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/MyPNG.cpp.o -MF CMakeFiles/_cmd.dir/layer0/MyPNG.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/MyPNG.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/MyPNG.cpp [ 37%] Building CXX object CMakeFiles/_cmd.dir/layer0/Parse.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Parse.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Parse.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Parse.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Parse.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer0/MemoryUsage.cpp: In function ‘size_t pymol::memory_usage()’: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/MemoryUsage.cpp:38:21: warning: use of assignment suppression and length modifier together in gnu_scanf format [-Wformat=] 38 | std::fscanf(fp, "%*zu%zu", &vmRSS); | ^~~~~~~~~ In file included from /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:71: In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1497:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 4 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: destination object ‘nx’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1497:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: at offset [8, 12] into destination object ‘nx’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1497:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: at offset [16, 20] into destination object ‘nx’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1497:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: at offset [24, 28] into destination object ‘nx’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1497:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: at offset [32, 36] into destination object ‘nx’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1497:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: at offset [40, 44] into destination object ‘nx’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1497:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: at offset [48, 52] into destination object ‘nx’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1498:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 4 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: destination object ‘ny’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1498:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: at offset [8, 12] into destination object ‘ny’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1498:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: at offset [16, 20] into destination object ‘ny’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1498:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: at offset [24, 28] into destination object ‘ny’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1498:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: at offset [32, 36] into destination object ‘ny’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1498:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: at offset [40, 44] into destination object ‘ny’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1498:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: at offset [48, 52] into destination object ‘ny’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1499:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 4 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: destination object ‘nz’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1499:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: at offset [8, 12] into destination object ‘nz’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1499:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: at offset [16, 20] into destination object ‘nz’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1499:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: at offset [24, 28] into destination object ‘nz’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1499:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: at offset [32, 36] into destination object ‘nz’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1499:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: at offset [40, 44] into destination object ‘nz’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1499:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: at offset [48, 52] into destination object ‘nz’ of size 4 1494 | int32_t nx, ny, nz; | ^~ [ 37%] Building CXX object CMakeFiles/_cmd.dir/layer0/Pixmap.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Pixmap.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Pixmap.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Pixmap.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Pixmap.cpp [ 37%] Building CXX object CMakeFiles/_cmd.dir/layer0/PostProcess.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/PostProcess.cpp.o -MF CMakeFiles/_cmd.dir/layer0/PostProcess.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/PostProcess.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/PostProcess.cpp [ 38%] Building CXX object CMakeFiles/_cmd.dir/layer0/PrintUtils.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/PrintUtils.cpp.o -MF CMakeFiles/_cmd.dir/layer0/PrintUtils.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/PrintUtils.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/PrintUtils.cpp [ 38%] Building CXX object CMakeFiles/_cmd.dir/layer0/ShaderMgr.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/ShaderMgr.cpp.o -MF CMakeFiles/_cmd.dir/layer0/ShaderMgr.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/ShaderMgr.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/ShaderMgr.cpp [ 39%] Building CXX object CMakeFiles/_cmd.dir/layer0/ShaderPreprocessor.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/ShaderPreprocessor.cpp.o -MF CMakeFiles/_cmd.dir/layer0/ShaderPreprocessor.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/ShaderPreprocessor.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/ShaderPreprocessor.cpp [ 39%] Building CXX object CMakeFiles/_cmd.dir/layer0/ShaderPrg.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/ShaderPrg.cpp.o -MF CMakeFiles/_cmd.dir/layer0/ShaderPrg.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/ShaderPrg.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/ShaderPrg.cpp In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_wrapped_v1({anonymous}::BlobMap&, uint32_t, bool, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1552:26, inlined from ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1751:29: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 4 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In member function ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1548:21: note: destination object ‘nz’ of size 4 1548 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_wrapped_v1({anonymous}::BlobMap&, uint32_t, bool, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1552:26, inlined from ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1751:29: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In member function ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1548:21: note: at offset [8, 12] into destination object ‘nz’ of size 4 1548 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_wrapped_v1({anonymous}::BlobMap&, uint32_t, bool, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1552:26, inlined from ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1751:29: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In member function ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1548:21: note: at offset [16, 20] into destination object ‘nz’ of size 4 1548 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_wrapped_v1({anonymous}::BlobMap&, uint32_t, bool, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1552:26, inlined from ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1751:29: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In member function ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1548:21: note: at offset [24, 28] into destination object ‘nz’ of size 4 1548 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_wrapped_v1({anonymous}::BlobMap&, uint32_t, bool, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1552:26, inlined from ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1751:29: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In member function ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1548:21: note: at offset [32, 36] into destination object ‘nz’ of size 4 1548 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_wrapped_v1({anonymous}::BlobMap&, uint32_t, bool, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1552:26, inlined from ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1751:29: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In member function ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1548:21: note: at offset [40, 44] into destination object ‘nz’ of size 4 1548 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_wrapped_v1({anonymous}::BlobMap&, uint32_t, bool, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1552:26, inlined from ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1751:29: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In member function ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1548:21: note: at offset [48, 52] into destination object ‘nz’ of size 4 1548 | int32_t nx, ny, nz; | ^~ [ 40%] Building CXX object CMakeFiles/_cmd.dir/layer0/Sphere.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 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CXX object CMakeFiles/_cmd.dir/layer0/TTT.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/TTT.cpp.o -MF CMakeFiles/_cmd.dir/layer0/TTT.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/TTT.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/TTT.cpp [ 40%] Building CXX object CMakeFiles/_cmd.dir/layer0/Tetsurf.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Tetsurf.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Tetsurf.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Tetsurf.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Tetsurf.cpp [ 41%] Building CXX object CMakeFiles/_cmd.dir/layer0/Texture.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Texture.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Texture.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Texture.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Texture.cpp [ 41%] Building CXX object CMakeFiles/_cmd.dir/layer0/Tracker.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Tracker.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Tracker.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Tracker.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Tracker.cpp [ 42%] Building CXX object CMakeFiles/_cmd.dir/layer0/Triangle.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Triangle.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Triangle.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Triangle.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Triangle.cpp [ 42%] Building CXX object CMakeFiles/_cmd.dir/layer0/Util.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Util.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Util.cpp.o.d -o 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CMakeFiles/_cmd.dir/layer0/Vector.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Vector.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Vector.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Texture.cpp: In function ‘bool TextureIsCharTextured(PyMOLGlobals*, int, float*)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Texture.cpp:130:9: warning: unused variable ‘use_shader’ [-Wunused-variable] 130 | short use_shader = (short) SettingGetGlobal_b(G, cSetting_use_shaders); | ^~~~~~~~~~ [ 43%] Building CXX object CMakeFiles/_cmd.dir/layer0/Word.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 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-I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/ccealignmodule.cpp.o -MF CMakeFiles/_cmd.dir/layer0/ccealignmodule.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/ccealignmodule.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/ccealignmodule.cpp [ 44%] Building CXX object CMakeFiles/_cmd.dir/layer0/marching_cubes.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include 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-mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Camera.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Camera.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Camera.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Camera.cpp [ 48%] Building CXX object CMakeFiles/_cmd.dir/layer1/Character.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 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-fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Color.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Color.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Color.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Color.cpp [ 49%] Building CXX object CMakeFiles/_cmd.dir/layer1/Control.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 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CMakeFiles/_cmd.dir/layer1/Extrude.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Extrude.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Extrude.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Extrude.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Extrude.cpp [ 50%] Building CXX object CMakeFiles/_cmd.dir/layer1/Font.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 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/build/reproducible-path/pymol-3.1.0+dfsg/layer1/Font.cpp [ 50%] Building CXX object CMakeFiles/_cmd.dir/layer1/FontGLUT.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/FontGLUT.cpp.o -MF CMakeFiles/_cmd.dir/layer1/FontGLUT.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/FontGLUT.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/FontGLUT.cpp [ 51%] Building CXX object CMakeFiles/_cmd.dir/layer1/FontGLUT8x13.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src 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CMakeFiles/_cmd.dir/layer1/FontGLUT8x13.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/FontGLUT8x13.cpp [ 51%] Building CXX object CMakeFiles/_cmd.dir/layer1/FontGLUT9x15.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/FontGLUT9x15.cpp.o -MF CMakeFiles/_cmd.dir/layer1/FontGLUT9x15.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/FontGLUT9x15.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/FontGLUT9x15.cpp [ 51%] Building CXX object CMakeFiles/_cmd.dir/layer1/FontGLUTHel10.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 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-I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/FontGLUTHel12.cpp.o -MF CMakeFiles/_cmd.dir/layer1/FontGLUTHel12.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/FontGLUTHel12.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/FontGLUTHel12.cpp [ 52%] Building CXX object CMakeFiles/_cmd.dir/layer1/FontGLUTHel18.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/FontGLUTHel18.cpp.o -MF CMakeFiles/_cmd.dir/layer1/FontGLUTHel18.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/FontGLUTHel18.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/FontGLUTHel18.cpp [ 53%] Building CXX object CMakeFiles/_cmd.dir/layer1/FontType.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/FontType.cpp.o -MF CMakeFiles/_cmd.dir/layer1/FontType.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/FontType.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/FontType.cpp [ 53%] Building CXX object CMakeFiles/_cmd.dir/layer1/ImageUtils.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/ImageUtils.cpp.o -MF CMakeFiles/_cmd.dir/layer1/ImageUtils.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/ImageUtils.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/ImageUtils.cpp In file included from /build/reproducible-path/pymol-3.1.0+dfsg/include/tnt/tnt.h:45, from /build/reproducible-path/pymol-3.1.0+dfsg/layer0/ccealignmodule.cpp:39: In member function ‘void TNT::Array1D::set_(T*, T*, const T&) [with T = double]’, inlined from ‘TNT::Array1D::Array1D(int, const T&) [with T = double]’ at /build/reproducible-path/pymol-3.1.0+dfsg/include/tnt/tnt_array1d.h:119:6, inlined from ‘PyObject* findBest(pcePoint, pcePoint, pathCache, int, int, int)’ at /build/reproducible-path/pymol-3.1.0+dfsg/layer0/ccealignmodule.cpp:506:28: /build/reproducible-path/pymol-3.1.0+dfsg/include/tnt/tnt_array1d.h:283:20: warning: ‘void* __builtin_memset(void*, int, long unsigned int)’ specified bound between 18446744056529682432 and 18446744073709551608 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=] 283 | *p = a; | ~~~^~~ [ 54%] Building CXX object CMakeFiles/_cmd.dir/layer1/Movie.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Movie.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Movie.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Movie.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Movie.cpp [ 54%] Building CXX object CMakeFiles/_cmd.dir/layer1/Ortho.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN 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-I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/P.cpp.o -MF CMakeFiles/_cmd.dir/layer1/P.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/P.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/P.cpp [ 55%] Building CXX object CMakeFiles/_cmd.dir/layer1/PConv.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/PConv.cpp.o -MF CMakeFiles/_cmd.dir/layer1/PConv.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/PConv.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/PConv.cpp [ 55%] Building CXX object CMakeFiles/_cmd.dir/layer1/Picking.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Picking.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Picking.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Picking.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Picking.cpp [ 56%] Building CXX object CMakeFiles/_cmd.dir/layer1/Pop.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Pop.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Pop.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Pop.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Pop.cpp [ 56%] Building CXX object CMakeFiles/_cmd.dir/layer1/PyMOLObject.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/PyMOLObject.cpp.o -MF CMakeFiles/_cmd.dir/layer1/PyMOLObject.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/PyMOLObject.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/PyMOLObject.cpp [ 56%] Building CXX object CMakeFiles/_cmd.dir/layer1/Ray.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Ray.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Ray.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Ray.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Ray.cpp [ 57%] Building CXX object CMakeFiles/_cmd.dir/layer1/Rep.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Rep.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Rep.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Rep.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Rep.cpp [ 57%] Building CXX object CMakeFiles/_cmd.dir/layer1/Scene.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Scene.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Scene.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Scene.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Scene.cpp [ 58%] Building CXX object CMakeFiles/_cmd.dir/layer1/SceneMouse.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/SceneMouse.cpp.o -MF CMakeFiles/_cmd.dir/layer1/SceneMouse.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/SceneMouse.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SceneMouse.cpp [ 58%] Building CXX object CMakeFiles/_cmd.dir/layer1/ScenePicking.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/ScenePicking.cpp.o -MF CMakeFiles/_cmd.dir/layer1/ScenePicking.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/ScenePicking.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/ScenePicking.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer1/PyMOLObject.cpp: In function ‘int ObjectMotion(pymol::CObject*, MViewAction, int, int, float, float, int, float, int, int, int, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer1/PyMOLObject.cpp:193:15: warning: ignoring return value of ‘constexpr const _Tp& std::max(const _Tp&, const _Tp&) [with _Tp = int]’, declared with attribute ‘nodiscard’ [-Wunused-result] 193 | std::max(0, first); | ~~~~~~~~^~~~~~~~~~ In file included from /usr/include/c++/15/bits/stl_uninitialized.h:63, from /usr/include/c++/15/memory:71, from /build/reproducible-path/pymol-3.1.0+dfsg/layer0/os_python.h:23, from /build/reproducible-path/pymol-3.1.0+dfsg/layer1/PyMOLObject.cpp:17: /usr/include/c++/15/bits/stl_algobase.h:258:5: note: declared here 258 | max(const _Tp& __a, const _Tp& __b) | ^~~ [ 59%] Building CXX object CMakeFiles/_cmd.dir/layer1/SceneRay.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/SceneRay.cpp.o -MF CMakeFiles/_cmd.dir/layer1/SceneRay.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/SceneRay.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SceneRay.cpp [ 59%] Building CXX object CMakeFiles/_cmd.dir/layer1/SceneRender.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/SceneRender.cpp.o -MF CMakeFiles/_cmd.dir/layer1/SceneRender.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/SceneRender.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SceneRender.cpp In file included from /usr/include/c++/15/bits/stl_algobase.h:64, from /usr/include/c++/15/bits/specfun.h:43, from /usr/include/c++/15/cmath:3913, from /usr/include/c++/15/math.h:36, from /build/reproducible-path/pymol-3.1.0+dfsg/layer0/os_std.h:24, from /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Scene.cpp:18: /usr/include/c++/15/bits/stl_pair.h: In instantiation of ‘constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = float&; _T2 = float&; typename __strip_reference_wrapper::type>::__type = float; typename decay<_Tp>::type = float; typename __strip_reference_wrapper::type>::__type = float; typename decay<_Tp2>::type = float]’: /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Scene.cpp:1469:24: required from here 1469 | return std::make_pair(clip.m_front, clip.m_back); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_pair.h:1164:5: note: parameter passing for argument of type ‘std::pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 1164 | make_pair(_T1&& __x, _T2&& __y) | ^~~~~~~~~ [ 59%] Building CXX object CMakeFiles/_cmd.dir/layer1/SceneView.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/SceneView.cpp.o -MF CMakeFiles/_cmd.dir/layer1/SceneView.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/SceneView.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SceneView.cpp [ 60%] Building CXX object CMakeFiles/_cmd.dir/layer1/ScrollBar.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/ScrollBar.cpp.o -MF CMakeFiles/_cmd.dir/layer1/ScrollBar.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/ScrollBar.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/ScrollBar.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SceneMouse.cpp: In function ‘void SceneClickTransformObject(PyMOLGlobals*, pymol::CObject*, const NamedPicking&, int, bool)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SceneMouse.cpp:455:32: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 237 [-Wformat-truncation=] 455 | " You clicked %s -> (%s)\n", buffer.c_str(), name ENDFB(G); | ^~ ~~~~ In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SceneMouse.cpp:19: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output 21 or more bytes (assuming 276) into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SceneMouse.cpp:454:11: note: in expansion of macro ‘PRINTFB’ 454 | PRINTFB(G, FB_Scene, FB_Results) | ^~~~~~~ [ 60%] Building CXX object CMakeFiles/_cmd.dir/layer1/Seq.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Seq.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Seq.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Seq.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Seq.cpp [ 61%] Building CXX object CMakeFiles/_cmd.dir/layer1/Setting.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Setting.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Setting.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Setting.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Setting.cpp [ 61%] Building CXX object CMakeFiles/_cmd.dir/layer1/Shaker.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Shaker.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Shaker.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Shaker.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Shaker.cpp [ 62%] Building CXX object CMakeFiles/_cmd.dir/layer1/SymOp.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/SymOp.cpp.o -MF CMakeFiles/_cmd.dir/layer1/SymOp.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/SymOp.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SymOp.cpp [ 62%] Building CXX object CMakeFiles/_cmd.dir/layer1/SymOpPConv.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/SymOpPConv.cpp.o -MF CMakeFiles/_cmd.dir/layer1/SymOpPConv.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/SymOpPConv.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SymOpPConv.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SymOp.cpp: In member function ‘std::string pymol::SymOp::to_string() const’: /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SymOp.cpp:37:32: warning: ‘%d’ directive output may be truncated writing between 1 and 4 bytes into a region of size between 0 and 5 [-Wformat-truncation=] 37 | std::snprintf(code, 8, "%u_%d%d%d", index + 1, x + 5, y + 5, z + 5); | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SymOp.cpp:37:26: note: directive argument in the range [-123, 132] 37 | std::snprintf(code, 8, "%u_%d%d%d", index + 1, x + 5, y + 5, z + 5); | ^~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SymOp.cpp:37:26: note: directive argument in the range [-123, 132] /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SymOp.cpp:37:16: note: ‘snprintf’ output between 6 and 17 bytes into a destination of size 8 37 | std::snprintf(code, 8, "%u_%d%d%d", index + 1, x + 5, y + 5, z + 5); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 62%] Building CXX object CMakeFiles/_cmd.dir/layer1/SymOpTools.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 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-I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/BondTypeHistory.cpp.o -MF CMakeFiles/_cmd.dir/layer2/BondTypeHistory.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/BondTypeHistory.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/BondTypeHistory.cpp [ 67%] Building CXX object CMakeFiles/_cmd.dir/layer2/CifFile.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include 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-fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/CifFile.cpp.o -MF CMakeFiles/_cmd.dir/layer2/CifFile.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/CifFile.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/CifFile.cpp [ 67%] Building CXX object CMakeFiles/_cmd.dir/layer2/CifMoleculeReader.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated 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-Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/CoordSet.cpp.o -MF CMakeFiles/_cmd.dir/layer2/CoordSet.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/CoordSet.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/CoordSet.cpp [ 68%] Building CXX object CMakeFiles/_cmd.dir/layer2/DistSet.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 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-Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/MmodTyping.cpp.o -MF CMakeFiles/_cmd.dir/layer2/MmodTyping.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/MmodTyping.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/MmodTyping.cpp [ 70%] Building CXX object CMakeFiles/_cmd.dir/layer2/MmtfMoleculeReader.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 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-ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/Mol2Typing.cpp.o -MF CMakeFiles/_cmd.dir/layer2/Mol2Typing.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/Mol2Typing.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/Mol2Typing.cpp [ 70%] Building CXX object CMakeFiles/_cmd.dir/layer2/MolV3000.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 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-I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/ObjectCallback.cpp.o -MF CMakeFiles/_cmd.dir/layer2/ObjectCallback.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/ObjectCallback.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectCallback.cpp [ 72%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectCurve.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS 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-I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/ObjectDist.cpp.o -MF CMakeFiles/_cmd.dir/layer2/ObjectDist.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/ObjectDist.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectDist.cpp [ 73%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectGadget.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY 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/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp [ 75%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectMolecule2.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/ObjectMolecule2.cpp.o -MF CMakeFiles/_cmd.dir/layer2/ObjectMolecule2.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/ObjectMolecule2.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule2.cpp [ 76%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectMolecule3.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/ObjectMolecule3.cpp.o -MF CMakeFiles/_cmd.dir/layer2/ObjectMolecule3.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/ObjectMolecule3.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule3.cpp [ 76%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectSlice.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/ObjectSlice.cpp.o -MF CMakeFiles/_cmd.dir/layer2/ObjectSlice.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/ObjectSlice.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSlice.cpp [ 77%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectSurface.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/ObjectSurface.cpp.o -MF CMakeFiles/_cmd.dir/layer2/ObjectSurface.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/ObjectSurface.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSurface.cpp [ 77%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectVolume.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/ObjectVolume.cpp.o -MF CMakeFiles/_cmd.dir/layer2/ObjectVolume.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/ObjectVolume.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectVolume.cpp [ 78%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepAngle.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepAngle.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepAngle.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepAngle.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepAngle.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMesh.cpp: In member function ‘virtual void ObjectMesh::update()’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMesh.cpp:508:39: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 226 [-Wformat-truncation=] 508 | "ObjectMeshUpdate-Error: map '%s' has been deleted.\n", | ^~ In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMesh.cpp:28: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 50 and 305 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMesh.cpp:507:9: note: in expansion of macro ‘PRINTFB’ 507 | PRINTFB(I->G, FB_ObjectMesh, FB_Errors) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMesh.cpp:541:38: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 232 [-Wformat-truncation=] 541 | " ObjectMesh: updating \"%s\".\n", I->Name ENDFB(G); | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 27 and 282 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMesh.cpp:540:13: note: in expansion of macro ‘PRINTFB’ 540 | PRINTFB(G, FB_ObjectMesh, FB_Details) | ^~~~~~~ [ 78%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepCartoon.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepCartoon.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepCartoon.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepCartoon.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepCartoon.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMesh.cpp: In function ‘void ObjectMeshDump(ObjectMesh*, const char*, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMesh.cpp:333:25: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 238 [-Wformat-truncation=] 333 | " ObjectMeshDump: %s written to %s\n", I->Name, fname ENDFB(I->G); | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output 31 or more bytes (assuming 286) into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMesh.cpp:332:7: note: in expansion of macro ‘PRINTFB’ 332 | PRINTFB(I->G, FB_ObjectMesh, FB_Actions) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSlice.cpp: In member function ‘virtual void ObjectSlice::update()’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSlice.cpp:639:42: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 225 [-Wformat-truncation=] 639 | "ObjectSliceUpdate-Error: map '%s' has been deleted.\n", oss->MapName | ^~ In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSlice.cpp:44: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 51 and 306 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSlice.cpp:638:9: note: in expansion of macro ‘PRINTFB’ 638 | PRINTFB(I->G, FB_ObjectSlice, FB_Errors) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSlice.cpp:650:39: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 231 [-Wformat-truncation=] 650 | " ObjectSlice: updating \"%s\".\n", I->Name ENDFB(I->G); | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 28 and 283 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSlice.cpp:649:11: note: in expansion of macro ‘PRINTFB’ 649 | PRINTFB(I->G, FB_ObjectSlice, FB_Blather) | ^~~~~~~ [ 78%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepCylBond.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepCylBond.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepCylBond.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepCylBond.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepCylBond.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSurface.cpp: In function ‘void ObjectSurfaceDump(ObjectSurface*, const char*, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSurface.cpp:269:30: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 235 [-Wformat-truncation=] 269 | " ObjectSurfaceDump: %s written to %s\n", I->Name, fname ENDFB(I->G); | ^~ In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSurface.cpp:45: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output 34 or more bytes (assuming 289) into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSurface.cpp:268:7: note: in expansion of macro ‘PRINTFB’ 268 | PRINTFB(I->G, FB_ObjectSurface, FB_Actions) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSurface.cpp: In member function ‘virtual void ObjectSurface::update()’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSurface.cpp:494:43: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 229 [-Wformat-truncation=] 494 | " ObjectSurface: updating \"%s\".\n", I->Name ENDFB(I->G); | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 30 and 285 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSurface.cpp:493:13: note: in expansion of macro ‘PRINTFB’ 493 | PRINTFB(I->G, FB_ObjectSurface, FB_Details) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp: In function ‘void ObjectMapDump(const ObjectMap*, const char*, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:5984:24: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 239 [-Wformat-truncation=] 5984 | " ObjectMapDump: %s written to %s\n", om->Name, fname ENDFB(om->G); | ^~ In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:48: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output 30 or more bytes (assuming 285) into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:5983:5: note: in expansion of macro ‘PRINTFB’ 5983 | PRINTFB(om->G, FB_ObjectMap, FB_Actions) | ^~~~~~~ [ 79%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepDihedral.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepDihedral.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepDihedral.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepDihedral.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepDihedral.cpp [ 79%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepDistDash.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepDistDash.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepDistDash.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepDistDash.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepDistDash.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectVolume.cpp: In function ‘ObjectMapState* ObjectVolumeStateGetMapState(ObjectVolumeState*)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectVolume.cpp:80:33: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 230 [-Wformat-truncation=] 80 | "ObjectVolume-Error: map '%s' has been deleted.\n", vs->MapName | ^~ In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectVolume.cpp:47: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 46 and 301 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectVolume.cpp:79:5: note: in expansion of macro ‘PRINTFB’ 79 | PRINTFB(G, FB_ObjectVolume, FB_Errors) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp: In function ‘CoordSet* ObjectMoleculeMOLStr2CoordSet.constprop(PyMOLGlobals*, const char*, AtomInfoType**, const char**)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp:7597:37: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 224 [-Wformat-truncation=] 7597 | " ObjMolMOLStr2CoordSet: title '%s'\n", nameTmp ENDFB(G) | ^~ ~~~~~~~ In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp:49: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 34 and 289 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp:7596:3: note: in expansion of macro ‘PRINTFB’ 7596 | PRINTFB(G, FB_ObjectMolecule, FB_Blather) | ^~~~~~~ [ 80%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepDistLabel.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepDistLabel.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepDistLabel.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepDistLabel.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepDistLabel.cpp [ 80%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepDot.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepDot.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepDot.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepDot.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepDot.cpp [ 81%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepEllipsoid.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepEllipsoid.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepEllipsoid.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepEllipsoid.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepEllipsoid.cpp [ 81%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepLabel.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepLabel.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepLabel.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepLabel.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepLabel.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp: In function ‘int ObjectMapGRDStrToMap(ObjectMap*, char*, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4291:18: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 243 [-Wformat-truncation=] 4291 | " ObjectMap: %s\n", cc ENDFB(I->G); | ^~ ~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 14 and 1037 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4290:3: note: in expansion of macro ‘PRINTFB’ 4290 | PRINTFB(I->G, FB_ObjectMap, FB_Details) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4291:18: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 243 [-Wformat-truncation=] 4291 | " ObjectMap: %s\n", cc ENDFB(I->G); | ^~ ~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 14 and 1037 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4290:3: note: in expansion of macro ‘PRINTFB’ 4290 | PRINTFB(I->G, FB_ObjectMap, FB_Details) | ^~~~~~~ [ 81%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepMesh.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepMesh.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepMesh.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepMesh.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepMesh.cpp [ 82%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepNonbonded.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepNonbonded.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepNonbonded.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepNonbonded.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepNonbonded.cpp [ 82%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepNonbondedSphere.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepNonbondedSphere.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepNonbondedSphere.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepNonbondedSphere.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepNonbondedSphere.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule2.cpp: In function ‘int ObjectMoleculeAddPseudoatom(ObjectMolecule*, int, const char*, const char*, const char*, const char*, const char*, const char*, float, int, float, float, const char*, const float*, int, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule2.cpp:335:27: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 238 [-Wformat-truncation=] 335 | " ObjMol: created %s/%s/%s/%s`%d%c/%s\n", | ^~ In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule2.cpp:36: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 26 and 291 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule2.cpp:334:7: note: in expansion of macro ‘PRINTFB’ 334 | PRINTFB(G, FB_ObjectMolecule, FB_Actions) | ^~~~~~~ [ 83%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepRibbon.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepRibbon.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepRibbon.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepRibbon.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepRibbon.cpp [ 83%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepSphere.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepSphere.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepSphere.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepSphere.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepSphere.cpp [ 83%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepSphereGenerate.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepSphereGenerate.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepSphereGenerate.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepSphereGenerate.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepSphereGenerate.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp: In member function ‘virtual void ObjectMolecule::update()’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp:10623:82: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size between 181 and 191 [-Wformat-truncation=] 10623 | " ObjectMolecule-DEBUG: updating representations for state %d of \"%s\".\n", | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 68 and 333 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp:10622:13: note: in expansion of macro ‘PRINTFB’ 10622 | PRINTFB(G, FB_ObjectMolecule, FB_Blather) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp: In function ‘ObjectMap* ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, const char*, int, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:2962:22: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 241 [-Wformat-truncation=] 2962 | " PHIStrToMap: %s\n", cc ENDFB(I->G); | ^~ ~~ In function ‘int ObjectMapPHIStrToMap(ObjectMap*, char*, int, int, int)’, inlined from ‘ObjectMap* ObjectMapReadPHIStr(PyMOLGlobals*, ObjectMap*, char*, int, int, int)’ at /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4804:25, inlined from ‘ObjectMap* ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, const char*, int, int, int, int)’ at /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4836:28: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 16 and 1039 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:2961:5: note: in expansion of macro ‘PRINTFB’ 2961 | PRINTFB(I->G, FB_ObjectMap, FB_Details) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp: In function ‘ObjectMap* ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, const char*, int, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:2971:22: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 241 [-Wformat-truncation=] 2971 | " PHIStrToMap: %s\n", cc ENDFB(I->G); | ^~ ~~ In function ‘int ObjectMapPHIStrToMap(ObjectMap*, char*, int, int, int)’, inlined from ‘ObjectMap* ObjectMapReadPHIStr(PyMOLGlobals*, ObjectMap*, char*, int, int, int)’ at /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4804:25, inlined from ‘ObjectMap* ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, const char*, int, int, int, int)’ at /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4836:28: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 16 and 1039 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:2970:5: note: in expansion of macro ‘PRINTFB’ 2970 | PRINTFB(I->G, FB_ObjectMap, FB_Details) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp: In function ‘ObjectMap* ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, const char*, int, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:2977:22: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 241 [-Wformat-truncation=] 2977 | " PHIStrToMap: %s\n", cc ENDFB(I->G); | ^~ ~~ In function ‘int ObjectMapPHIStrToMap(ObjectMap*, char*, int, int, int)’, inlined from ‘ObjectMap* ObjectMapReadPHIStr(PyMOLGlobals*, ObjectMap*, char*, int, int, int)’ at /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4804:25, inlined from ‘ObjectMap* ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, const char*, int, int, int, int)’ at /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4836:28: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 16 and 1039 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:2976:5: note: in expansion of macro ‘PRINTFB’ 2976 | PRINTFB(I->G, FB_ObjectMap, FB_Details) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp: In function ‘ObjectMap* ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, const char*, int, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:3059:22: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 241 [-Wformat-truncation=] 3059 | " PHIStrToMap: %s\n", cc ENDFB(I->G); | ^~ ~~ In function ‘int ObjectMapPHIStrToMap(ObjectMap*, char*, int, int, int)’, inlined from ‘ObjectMap* ObjectMapReadPHIStr(PyMOLGlobals*, ObjectMap*, char*, int, int, int)’ at /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4804:25, inlined from ‘ObjectMap* ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, const char*, int, int, int, int)’ at /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4836:28: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 16 and 1039 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:3058:5: note: in expansion of macro ‘PRINTFB’ 3058 | PRINTFB(I->G, FB_ObjectMap, FB_Details) | ^~~~~~~ [ 84%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepSphereImmediate.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepSphereImmediate.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepSphereImmediate.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepSphereImmediate.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepSphereImmediate.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp: In function ‘int ObjectMoleculeMoveAtom(ObjectMolecule*, int, int, const float*, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp:10749:43: warning: ‘%s’ directive writing up to 1023 bytes into a region of size 1004 [-Wformat-overflow=] 10749 | sprintf(line, "cmd.translate_atom(\"%s\",%15.9f,%15.9f,%15.9f,%d,%d,%d)\n", | ^~ 10750 | buffer, v[0], v[1], v[2], state + 1, mode, 0); | ~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp:10749:21: note: directive argument in the range [-2147483647, 2147483647] 10749 | sprintf(line, "cmd.translate_atom(\"%s\",%15.9f,%15.9f,%15.9f,%d,%d,%d)\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp:10749:14: note: ‘sprintf’ output between 78 and 2036 bytes into a destination of size 1024 10749 | sprintf(line, "cmd.translate_atom(\"%s\",%15.9f,%15.9f,%15.9f,%d,%d,%d)\n", | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 10750 | buffer, v[0], v[1], v[2], state + 1, mode, 0); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 84%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepSurface.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepSurface.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepSurface.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepSurface.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepSurface.cpp [ 85%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepWireBond.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src 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CMakeFiles/_cmd.dir/layer2/RepWireBond.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepWireBond.cpp [ 85%] Building CXX object CMakeFiles/_cmd.dir/layer2/Sculpt.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/Sculpt.cpp.o -MF CMakeFiles/_cmd.dir/layer2/Sculpt.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/Sculpt.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/Sculpt.cpp [ 86%] Building CXX object CMakeFiles/_cmd.dir/layer2/SculptCache.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/SculptCache.cpp.o -MF CMakeFiles/_cmd.dir/layer2/SculptCache.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/SculptCache.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/SculptCache.cpp [ 86%] Building CXX object CMakeFiles/_cmd.dir/layer2/SideChainHelper.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated 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-Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/VFont.cpp.o -MF CMakeFiles/_cmd.dir/layer2/VFont.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/VFont.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/VFont.cpp [ 87%] Building CXX object CMakeFiles/_cmd.dir/layer3/AtomIterators.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 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-mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/CifDataValueFormatter.cpp.o -MF CMakeFiles/_cmd.dir/layer3/CifDataValueFormatter.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/CifDataValueFormatter.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/CifDataValueFormatter.cpp [ 88%] Building CXX object CMakeFiles/_cmd.dir/layer3/Editor.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 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CMakeFiles/_cmd.dir/layer3/Executive.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/Executive.cpp.o -MF CMakeFiles/_cmd.dir/layer3/Executive.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/Executive.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp [ 89%] Building CXX object CMakeFiles/_cmd.dir/layer3/ExecutivePython.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 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-I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/Interactions.cpp.o -MF CMakeFiles/_cmd.dir/layer3/Interactions.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/Interactions.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Interactions.cpp [ 89%] Building CXX object CMakeFiles/_cmd.dir/layer3/MaeExportHelpers.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include 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CMakeFiles/_cmd.dir/layer3/MaeExportHelpers.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/MaeExportHelpers.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/MaeExportHelpers.cpp [ 90%] Building CXX object CMakeFiles/_cmd.dir/layer3/MoleculeExporter.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/MoleculeExporter.cpp.o -MF CMakeFiles/_cmd.dir/layer3/MoleculeExporter.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/MoleculeExporter.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/MoleculeExporter.cpp [ 90%] Building CXX object CMakeFiles/_cmd.dir/layer3/MovieScene.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable 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-I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/PlugIOManager.cpp.o -MF CMakeFiles/_cmd.dir/layer3/PlugIOManager.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/PlugIOManager.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/PlugIOManager.cpp [ 91%] Building CXX object CMakeFiles/_cmd.dir/layer3/RingFinder.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 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-I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/Seeker.cpp.o -MF CMakeFiles/_cmd.dir/layer3/Seeker.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/Seeker.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Seeker.cpp In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Setting.h:27, from /build/reproducible-path/pymol-3.1.0+dfsg/layer1/PyMOLObject.h:25, from /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.h:27, from /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:38: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Result.h: In constructor ‘pymol::Result::Result(type) [with ResultT = std::pair]’: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Result.h:99:3: note: parameter passing for argument of type ‘std::pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 99 | Result(type r) : m_result(std::move(r)) {} | ^~~~~~ [ 92%] Building CXX object CMakeFiles/_cmd.dir/layer3/Selector.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/Selector.cpp.o -MF CMakeFiles/_cmd.dir/layer3/Selector.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/Selector.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Selector.cpp [ 92%] Building CXX object CMakeFiles/_cmd.dir/layer3/SelectorTmp.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/SelectorTmp.cpp.o -MF CMakeFiles/_cmd.dir/layer3/SelectorTmp.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/SelectorTmp.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/SelectorTmp.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer3/PlugIOManager.cpp: In function ‘pymol::CObject* PlugIOManagerLoad(PyMOLGlobals*, pymol::CObject**, const char*, int, int, const char*, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/PlugIOManager.cpp:941:65: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 200 [-Wformat-truncation=] 941 | " PlugIOManagerLoad: can't load trajectory into object '%s'\n", obj->Name ENDFB(G); | ^~ In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer3/PlugIOManager.cpp:28: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 58 and 313 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/PlugIOManager.cpp:940:7: note: in expansion of macro ‘PRINTFB’ 940 | PRINTFB(G, FB_ObjectMolecule, FB_Errors) | ^~~~~~~ [ 93%] Building CXX object CMakeFiles/_cmd.dir/layer3/SpecRec.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/SpecRec.cpp.o -MF CMakeFiles/_cmd.dir/layer3/SpecRec.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/SpecRec.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/SpecRec.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp: In function ‘void EditorPrepareDrag(PyMOLGlobals*, pymol::CObject*, int, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp:1935:29: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 236 [-Wformat-truncation=] 1935 | " Editor: grabbing (%s).", name ENDFB(G); | ^~ ~~~~ In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp:42: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 22 and 277 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp:1934:7: note: in expansion of macro ‘PRINTFB’ 1934 | PRINTFB(G, FB_Editor, FB_Blather) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp: In function ‘void EditorDefineExtraPks(PyMOLGlobals*)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp:337:29: warning: ‘%s’ directive writing up to 255 bytes into a region of size 249 [-Wformat-overflow=] 337 | sprintf(buffer, "(byres %s)", name); | ^~ ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp:337:12: note: ‘sprintf’ output between 9 and 264 bytes into a destination of size 256 337 | sprintf(buffer, "(byres %s)", name); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp:339:31: warning: ‘%s’ directive writing up to 255 bytes into a region of size 247 [-Wformat-overflow=] 339 | sprintf(buffer, "(bychain %s)", name); | ^~ ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp:339:12: note: ‘sprintf’ output between 11 and 266 bytes into a destination of size 256 339 | sprintf(buffer, "(bychain %s)", name); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp:341:32: warning: ‘%s’ directive writing up to 255 bytes into a region of size 246 [-Wformat-overflow=] 341 | sprintf(buffer, "(byobject %s)", name); | ^~ ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp:341:12: note: ‘sprintf’ output between 12 and 267 bytes into a destination of size 256 341 | sprintf(buffer, "(byobject %s)", name); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 93%] Building CXX object CMakeFiles/_cmd.dir/layer3/SpecRecSpecial.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 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/build/reproducible-path/pymol-3.1.0+dfsg/layer3/SpecRecSpecial.cpp [ 94%] Building CXX object CMakeFiles/_cmd.dir/layer4/Cmd.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer4/Cmd.cpp.o -MF CMakeFiles/_cmd.dir/layer4/Cmd.cpp.o.d -o CMakeFiles/_cmd.dir/layer4/Cmd.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer4/Cmd.cpp [ 94%] Building CXX object CMakeFiles/_cmd.dir/layer4/Menu.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src 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CMakeFiles/_cmd.dir/layer4/Menu.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer4/Menu.cpp [ 94%] Building CXX object CMakeFiles/_cmd.dir/layer4/PopUp.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer4/PopUp.cpp.o -MF CMakeFiles/_cmd.dir/layer4/PopUp.cpp.o.d -o CMakeFiles/_cmd.dir/layer4/PopUp.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer4/PopUp.cpp [ 95%] Building CXX object CMakeFiles/_cmd.dir/layer5/PyMOL.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include 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-fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/ov/src/OVOneToOne.cpp.o -MF CMakeFiles/_cmd.dir/ov/src/OVOneToOne.cpp.o.d -o CMakeFiles/_cmd.dir/ov/src/OVOneToOne.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/ov/src/OVOneToOne.cpp [ 99%] Building CXX object CMakeFiles/_cmd.dir/ov/src/OVRandom.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 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CMakeFiles/_cmd.dir/ov/src/ov_utility.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/ov/src/ov_utility.cpp.o -MF CMakeFiles/_cmd.dir/ov/src/ov_utility.cpp.o.d -o CMakeFiles/_cmd.dir/ov/src/ov_utility.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/ov/src/ov_utility.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘pymol::Result<> ExecutiveRemoveAtoms(PyMOLGlobals*, const char*, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:9120:58: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size between 207 and 217 [-Wformat-truncation=] 9120 | " Remove: eliminated %d atoms in model \"%s\".\n", | ^~ In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:94: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 42 and 307 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:9119:15: note: in expansion of macro ‘PRINTFB’ 9119 | PRINTFB(G, FB_Editor, FB_Actions) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘int ExecutiveSetBondSettingFromString(PyMOLGlobals*, int, const char*, const char*, const char*, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11551:28: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 11551 | " Setting: %s set for %d bonds in object \"%s\".\n", | ^~ 11552 | name, nSet, obj->Name ENDF(G); | ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11551:17: note: directive argument in the range [1, 2147483647] 11551 | " Setting: %s set for %d bonds in object \"%s\".\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output between 42 and 560 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11550:15: note: in expansion of macro ‘PRINTF’ 11550 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘PyObject* ExecutiveGetBondSetting(PyMOLGlobals*, int, char*, const char*, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11632:26: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 11632 | " Getting: %s for %d bonds in object \"%s\".\n", | ^~ 11633 | name, nSet, obj->Name ENDF(G); | ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11632:15: note: directive argument in the range [1, 2147483647] 11632 | " Getting: %s for %d bonds in object \"%s\".\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output between 38 and 556 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11631:13: note: in expansion of macro ‘PRINTF’ 11631 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘int ExecutiveSetBondSetting(PyMOLGlobals*, int, PyObject*, const char*, const char*, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11732:62: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size between 208 and 217 [-Wformat-truncation=] 11732 | " Setting: %s set for %d bonds in object \"%s\".\n", | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output 42 or more bytes (assuming 306) into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11731:17: note: in expansion of macro ‘PRINTF’ 11731 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘int ExecutiveUnsetBondSetting(PyMOLGlobals*, int, const char*, const char*, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11811:26: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 11811 | " Setting: %s unset for %d bonds in object \"%s\".\n", | ^~ 11812 | name, nSet, rec->obj->Name ENDF(G); | ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11811:15: note: directive argument in the range [1, 2147483647] 11811 | " Setting: %s unset for %d bonds in object \"%s\".\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output between 44 and 562 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11810:13: note: in expansion of macro ‘PRINTF’ 11810 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘int ExecutiveSetObjSettingFromString(PyMOLGlobals*, int, const char*, pymol::CObject*, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12353:30: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 12353 | " Setting: %s set to %s in object \"%s\", state %d.\n", | ^~ 12354 | name, value2, obj->Name, state + 1 ENDF(G); | ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12353:19: note: directive argument in the range [1, 2147483647] 12353 | " Setting: %s set to %s in object \"%s\", state %d.\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output between 43 and 1584 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12352:17: note: in expansion of macro ‘PRINTF’ 12352 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12345:30: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 12345 | " Setting: %s set to %s in object \"%s\".\n", | ^~ 12346 | name, value2, obj->Name ENDF(G); | ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output between 34 and 1566 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12344:17: note: in expansion of macro ‘PRINTF’ 12344 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12324:29: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 12324 | PRINTF " Setting: %s set to %s.\n", name, value2 ENDF(G); | ^~ ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output between 21 and 1298 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12324:11: note: in expansion of macro ‘PRINTF’ 12324 | PRINTF " Setting: %s set to %s.\n", name, value2 ENDF(G); | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘int ExecutiveSetSettingFromString(PyMOLGlobals*, int, const char*, const char*, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12256:36: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 12256 | " Setting: %s set for %d atoms in object \"%s\".\n", | ^~ 12257 | name, op.i4, rec->obj->Name ENDF(G); | ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output between 42 and 561 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12255:23: note: in expansion of macro ‘PRINTF’ 12255 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12224:32: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 12224 | " Setting: %s set to %s in %d objects, state %d.\n", | ^~ 12225 | name, value2, nObj, state + 1 ENDF(G); | ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12224:21: note: directive argument in the range [1, 2147483647] 12224 | " Setting: %s set to %s in %d objects, state %d.\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12224:21: note: directive argument in the range [1, 2147483647] /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output between 43 and 1338 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12223:19: note: in expansion of macro ‘PRINTF’ 12223 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12221:32: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 12221 | " Setting: %s set to %s in %d objects.\n", name, value2, nObj ENDF(G); | ^~ ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12221:21: note: directive argument in the range [1, 2147483647] 12221 | " Setting: %s set to %s in %d objects.\n", name, value2, nObj ENDF(G); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output between 34 and 1320 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12220:19: note: in expansion of macro ‘PRINTF’ 12220 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12288:36: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 12288 | " Setting: %s set to %s in object \"%s\", state %d.\n", | ^~ 12289 | name, value2, rec->obj->Name, state + 1 ENDF(G); | ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12288:25: note: directive argument in the range [1, 2147483647] 12288 | " Setting: %s set to %s in object \"%s\", state %d.\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output between 43 and 1584 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12287:23: note: in expansion of macro ‘PRINTF’ 12287 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12280:36: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 12280 | " Setting: %s set to %s in object \"%s\".\n", | ^~ 12281 | name, value2, rec->obj->Name ENDF(G); | ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output between 34 and 1566 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12279:23: note: in expansion of macro ‘PRINTF’ 12279 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12184:29: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 12184 | PRINTF " Setting: %s set to %s.\n", name, value2 ENDF(G); | ^~ ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output between 21 and 1298 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12184:11: note: in expansion of macro ‘PRINTF’ 12184 | PRINTF " Setting: %s set to %s.\n", name, value2 ENDF(G); | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘bool ExecutiveSetSymmetry(PyMOLGlobals*, pymol::zstring_view, int, const CSymmetry&, bool)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5973:46: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 199 [-Wformat-truncation=] 5973 | " %s-Warning: Cannot set symmetry for '%s' (type %s)\n", __func__, | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 84 and 339 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5972:7: note: in expansion of macro ‘PRINTFB’ 5972 | PRINTFB(G, FB_Executive, FB_Warnings) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5982:43: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 202 [-Wformat-truncation=] 5982 | " %s-Details: Updated symmetry for '%s'\n", __func__, obj->Name ENDFB(G); | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 56 and 311 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5981:7: note: in expansion of macro ‘PRINTFB’ 5981 | PRINTFB(G, FB_Executive, FB_Details) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5973:46: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 199 [-Wformat-truncation=] 5973 | " %s-Warning: Cannot set symmetry for '%s' (type %s)\n", __func__, | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 84 and 339 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5972:7: note: in expansion of macro ‘PRINTFB’ 5972 | PRINTFB(G, FB_Executive, FB_Warnings) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Selector.cpp: In function ‘int SelectorAssignSS(PyMOLGlobals*, int, int, int, int, ObjectMolecule*, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Selector.cpp:1717:70: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 207 [-Wformat-truncation=] 1717 | " AssignSS-Warning: Ignoring incomplete residue /%s/%s/%s/%d%c ...\n", | ^~ In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Selector.cpp:37: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 59 and 324 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Selector.cpp:1716:19: note: in expansion of macro ‘PRINTFB’ 1716 | PRINTFB(G, FB_Selector, FB_Warnings) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘pymol::Result<> ExecutiveUnsetSetting(PyMOLGlobals*, int, pymol::zstring_view, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12465:68: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 215 [-Wformat-truncation=] 12465 | " Setting: %s unset for %d atoms in object \"%s\".\n", | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output 44 or more bytes (assuming 299) into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12464:21: note: in expansion of macro ‘PRINTF’ 12464 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12487:57: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 227 [-Wformat-truncation=] 12487 | " Setting: %s unset in object \"%s\", state %d.\n", | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12487:25: note: directive argument in the range [1, 2147483647] 12487 | " Setting: %s unset in object \"%s\", state %d.\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output 41 or more bytes (assuming 305) into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12486:23: note: in expansion of macro ‘PRINTF’ 12486 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12481:57: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 227 [-Wformat-truncation=] 12481 | " Setting: %s unset in object \"%s\".\n", | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output 32 or more bytes (assuming 287) into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12480:23: note: in expansion of macro ‘PRINTF’ 12480 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In member function ‘virtual int CExecutive::drag(int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:15625:55: warning: ‘%s’ directive writing up to 1023 bytes into a region of size 1013 [-Wformat-overflow=] 15625 | sprintf(I->ReorderLog, "cmd.order(\"%s\",location=\"%s\")\n", | ^~ 15626 | order_input, (location == -2) ? "upper" : "current"); | ~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:15625:26: note: ‘sprintf’ output between 32 and 1057 bytes into a destination of size 1024 15625 | sprintf(I->ReorderLog, "cmd.order(\"%s\",location=\"%s\")\n", | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 15626 | order_input, (location == -2) ? "upper" : "current"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘pymol::Result<> ExecutiveBond(PyMOLGlobals*, const char*, const char*, int, int, int, pymol::zstring_view)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:9484:67: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size between 200 and 210 [-Wformat-truncation=] 9484 | " Valence: %d bond valences adjusted in model \"%s\".\n", cnt, | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 49 and 314 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:9483:17: note: in expansion of macro ‘PRINTFB’ 9483 | PRINTFB(G, FB_Editor, FB_Actions) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:9496:59: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size between 208 and 218 [-Wformat-truncation=] 9496 | " Unbond: %d bonds removed from model \"%s\".\n", | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 41 and 306 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:9495:17: note: in expansion of macro ‘PRINTFB’ 9495 | PRINTFB(G, FB_Editor, FB_Actions) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:9471:53: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size between 214 and 224 [-Wformat-truncation=] 9471 | " Bond: %d bonds added to model \"%s\".\n", cnt, rec->obj->Name | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 35 and 300 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:9470:17: note: in expansion of macro ‘PRINTFB’ 9470 | PRINTFB(G, FB_Editor, FB_Actions) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘pymol::Result<> ExecutiveSetSetting(PyMOLGlobals*, int, PyObject*, pymol::zstring_view, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12004:70: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 217 [-Wformat-truncation=] 12004 | " Setting: %s set for %d atoms in object \"%s\".\n", | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output 42 or more bytes (assuming 297) into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12003:25: note: in expansion of macro ‘PRINTF’ 12003 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11915:42: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 237 [-Wformat-truncation=] 11915 | " Setting: %s set to %s in %d objects, state %d.\n", | ^~ 11916 | name, value, nObj, state + 1 ENDF(G); | ~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11915:21: note: directive argument in the range [1, 2147483647] 11915 | " Setting: %s set to %s in %d objects, state %d.\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11915:21: note: directive argument in the range [1, 2147483647] /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output 43 or more bytes (assuming 1084) into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11914:19: note: in expansion of macro ‘PRINTF’ 11914 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11912:42: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 237 [-Wformat-truncation=] 11912 | " Setting: %s set to %s in %d objects.\n", name, value, nObj ENDF(G); | ^~ ~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11912:21: note: directive argument in the range [1, 2147483647] 11912 | " Setting: %s set to %s in %d objects.\n", name, value, nObj ENDF(G); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output 34 or more bytes (assuming 1066) into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11911:19: note: in expansion of macro ‘PRINTF’ 11911 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12036:46: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 237 [-Wformat-truncation=] 12036 | " Setting: %s set to %s in object \"%s\", state %d.\n", | ^~ 12037 | name, value, rec->obj->Name, state + 1 ENDF(G); | ~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12036:25: note: directive argument in the range [1, 2147483647] 12036 | " Setting: %s set to %s in object \"%s\", state %d.\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output 43 or more bytes (assuming 1330) into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12035:23: note: in expansion of macro ‘PRINTF’ 12035 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12029:46: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 237 [-Wformat-truncation=] 12029 | " Setting: %s set to %s in object \"%s\".\n", | ^~ 12030 | name, value, rec->obj->Name ENDF(G); | ~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output 34 or more bytes (assuming 1312) into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12028:23: note: in expansion of macro ‘PRINTF’ 12028 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11871:39: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 237 [-Wformat-truncation=] 11871 | PRINTF " Setting: %s set to %s.\n", name, value ENDF(G); | ^~ ~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output 21 or more bytes (assuming 1044) into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11871:11: note: in expansion of macro ‘PRINTF’ 11871 | PRINTF " Setting: %s set to %s.\n", name, value ENDF(G); | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘void ExecutiveManageObject(PyMOLGlobals*, pymol::CObject*, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:14601:37: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 229 [-Wformat-truncation=] 14601 | " Executive-Warning: name \"%s\" collides with a selection language keyword.\n", | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 73 and 328 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:14600:7: note: in expansion of macro ‘PRINTFB’ 14600 | PRINTFB(G, FB_Executive, FB_Warnings) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:14596:36: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 230 [-Wformat-truncation=] 14596 | " Executive: object name \"%s\" is illegal -- renamed to 'all_'.\n", obj->Name | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 61 and 316 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:14595:7: note: in expansion of macro ‘PRINTFB’ 14595 | PRINTFB(G, FB_Executive, FB_Warnings) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:14627:11: warning: ‘char* strcpy(char*, const char*)’ writing between 1 and 256 bytes into a region of size 0 overflows the destination [-Wstringop-overflow=] 14627 | strcpy(rec->name, obj->Name); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~ cc1plus: note: destination object is likely at address zero /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘int ExecutiveGroup(PyMOLGlobals*, pymol::zstring_view, pymol::zstring_view, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:2275:40: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 235 [-Wformat-truncation=] 2275 | " Executive: adding '%s' to group '%s'.\n", rec.name, rec.group_name | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 36 and 546 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:2274:17: note: in expansion of macro ‘PRINTFB’ 2274 | PRINTFB(G, FB_Executive, FB_Actions) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘pymol::Result > ExecutiveSetName(PyMOLGlobals*, pymol::zstring_view, pymol::zstring_view, bool)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:3535:41: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 222 [-Wformat-truncation=] 3535 | " Warning: Invalid characters in '%s' have been replaced or stripped\n", | ^~ 3536 | name ENDFB(G); | ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 67 and 322 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:3534:5: note: in expansion of macro ‘PRINTFB’ 3534 | PRINTFB(G, FB_Executive, FB_Warnings) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘int ExecutiveSetSession(PyMOLGlobals*, PyObject*, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5097:57: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 213 [-Wformat-truncation=] 5097 | " Executive: skipping unrecognized object \"%s\" of type %d.\n", | ^~ In function ‘int ExecutiveSetNamedEntries(PyMOLGlobals*, PyObject*, int, int, int)’, inlined from ‘int ExecutiveSetSession(PyMOLGlobals*, PyObject*, int, int)’ at /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5727:38: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 56 and 321 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5096:11: note: in expansion of macro ‘PRINTFB’ 5096 | PRINTFB(G, FB_Executive, FB_Errors) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘int ExecutiveSetSession(PyMOLGlobals*, PyObject*, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5122:58: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 210 [-Wformat-truncation=] 5122 | "ExectiveSetNamedEntries-Error: after object \"%s\".\n", rec->name ENDFB(G); | ^~ In function ‘int ExecutiveSetNamedEntries(PyMOLGlobals*, PyObject*, int, int, int)’, inlined from ‘int ExecutiveSetSession(PyMOLGlobals*, PyObject*, int, int)’ at /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5727:38: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 49 and 304 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5121:9: note: in expansion of macro ‘PRINTFB’ 5121 | PRINTFB(G, FB_Executive, FB_Errors) | ^~~~~~~ [100%] Linking CXX shared library 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CMakeFiles/_cmd.dir/ov/src/OVContext.cpp.o CMakeFiles/_cmd.dir/ov/src/OVHeap.cpp.o CMakeFiles/_cmd.dir/ov/src/OVHeapArray.cpp.o CMakeFiles/_cmd.dir/ov/src/OVLexicon.cpp.o CMakeFiles/_cmd.dir/ov/src/OVOneToAny.cpp.o CMakeFiles/_cmd.dir/ov/src/OVOneToOne.cpp.o CMakeFiles/_cmd.dir/ov/src/OVRandom.cpp.o CMakeFiles/_cmd.dir/ov/src/ov_utility.cpp.o -lpng -lfreetype -lxml2 -lGL -lGLEW -lnetcdf -fopenmp gmake[3]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd' [100%] Built target _cmd gmake[2]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd/CMakeFiles 0 gmake[1]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd' cmake /build/reproducible-path/pymol-3.1.0+dfsg -DTARGET_NAME=_champ 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while(count&&(((int)p)&mask)) { | ^ [100%] Linking C shared library /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/champ/_champ.cpython-314-aarch64-linux-gnu.so /usr/bin/cmake -E cmake_link_script CMakeFiles/_champ.dir/link.txt --verbose=1 /usr/bin/cc -fPIC -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/_champ.dir/link.d -Wl,-soname,_champ.cpython-314-aarch64-linux-gnu.so -o /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/champ/_champ.cpython-314-aarch64-linux-gnu.so CMakeFiles/_champ.dir/contrib/champ/champ.c.o CMakeFiles/_champ.dir/contrib/champ/champ_module.c.o CMakeFiles/_champ.dir/contrib/champ/chiral.c.o CMakeFiles/_champ.dir/contrib/champ/err2.c.o CMakeFiles/_champ.dir/contrib/champ/feedback2.c.o CMakeFiles/_champ.dir/contrib/champ/list.c.o CMakeFiles/_champ.dir/contrib/champ/os_memory.c.o CMakeFiles/_champ.dir/contrib/champ/sort.c.o CMakeFiles/_champ.dir/contrib/champ/strblock.c.o CMakeFiles/_champ.dir/contrib/champ/vla.c.o gmake[3]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_champ' [100%] Built target _champ gmake[2]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_champ' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_champ/CMakeFiles 0 gmake[1]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_champ' I: pybuild base:385: /usr/bin/python3 setup.py build /usr/lib/python3/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated !! ******************************************************************************** Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). This deprecation is overdue, please update your project and remove deprecated calls to avoid build errors in the future. See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! corresp(dist, value, root_dir) running build running build_py creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/morphing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/computing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/seqalign.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/keyboard.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/shortcut.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/util.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/xwin.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/wizarding.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/diagnosing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/helping.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/povray.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/controlling.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/fitting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/preset.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/checking.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/querying.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/callback.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/parsing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/moving.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/editor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/shortcut_dict.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/internal.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/selector.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/viewing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/save_shortcut.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/completing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/selecting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/keywords.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/cgo.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/headering.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/movie.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/colorramping.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/cmd.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/invocation.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/colorprinting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/api.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/menu.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/editing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/rpc.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/cgobuilder.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/experimenting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/parser.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/mpeg_encode.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/__main__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/creating.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/setting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/shortcut_manager.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/_gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/locking.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/exporting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/constants.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/xray.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/externing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/lazyio.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/monitoring.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/pymolhttpd.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/feedingback.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/constants_palette.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/importing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/commanding.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol copying modules/pymol/vfont.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol2 copying modules/pymol2/cmd2.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol2 copying modules/pymol2/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol2 creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt copying modules/pmg_qt/file_dialogs.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt copying modules/pmg_qt/shortcut_menu_gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt copying modules/pmg_qt/advanced_settings_gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt copying modules/pmg_qt/scene_bin_gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt copying modules/pmg_qt/pymol_gl_widget.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt copying modules/pmg_qt/volume.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt copying modules/pmg_qt/properties_dialog.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt copying modules/pmg_qt/builder.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt copying modules/pmg_qt/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt copying modules/pmg_qt/mimic_pmg_tk.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt copying modules/pmg_qt/mimic_tk.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt copying modules/pmg_qt/keymapping.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt copying modules/pmg_qt/TextEditor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt copying modules/pmg_qt/pymol_qt_gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk copying modules/pmg_tk/SetEditor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk copying modules/pmg_tk/PMGApp.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk copying modules/pmg_tk/volume.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk copying modules/pmg_tk/PyMOLMapLoad.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk copying modules/pmg_tk/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk copying modules/pmg_tk/ColorEditor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk copying modules/pmg_tk/TextEditor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk copying modules/pmg_tk/Setting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk copying modules/pmg_tk/Demo.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/place.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/bond_mmff.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/protein_residues.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/charge.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/mae.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/protein_amber99.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/water_residues.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/xyz.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/arc.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/pkl.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/gms.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/io.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/dictdb.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/lst.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/cif.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/mass.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/protein_amber.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/sdf.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/models.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/map.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/cc1.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/gamess1.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/bonds.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/water_amber.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/pdb.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/cpv.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/mol2.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/mol.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/brick.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/hetatm.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/bond_amber.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/solvate.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/neighbor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/mmd.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/protein.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy copying modules/chempy/protein_mmff.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard copying modules/pymol/wizard/sculpting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard copying modules/pymol/wizard/filter.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard copying modules/pymol/wizard/dragging.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard copying modules/pymol/wizard/nucmutagenesis.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard copying modules/pymol/wizard/charge.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard copying modules/pymol/wizard/distance.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard copying modules/pymol/wizard/command.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard copying modules/pymol/wizard/toggle.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard copying modules/pymol/wizard/message.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard copying modules/pymol/wizard/label.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard copying modules/pymol/wizard/cleanup.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard copying modules/pymol/wizard/density.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard copying modules/pymol/wizard/pair_fit.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard copying modules/pymol/wizard/benchmark.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard copying modules/pymol/wizard/box.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard copying modules/pymol/wizard/annotation.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard copying modules/pymol/wizard/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard copying modules/pymol/wizard/renaming.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard copying modules/pymol/wizard/measurement.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard copying modules/pymol/wizard/mutagenesis.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard copying modules/pymol/wizard/pseudoatom.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard copying modules/pymol/wizard/appearance.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard copying modules/pymol/wizard/openvr.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard copying modules/pymol/wizard/stereodemo.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard copying modules/pymol/wizard/demo.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard copying modules/pymol/wizard/security.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/plugins copying modules/pymol/plugins/repository.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/plugins copying modules/pymol/plugins/installation.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/plugins copying modules/pymol/plugins/legacysupport.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/plugins copying modules/pymol/plugins/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/plugins copying modules/pymol/plugins/managergui_qt.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/plugins copying modules/pymol/plugins/managergui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/plugins creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/Qt copying modules/pymol/Qt/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/Qt copying modules/pymol/Qt/utils.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/Qt creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/stereochemistry copying modules/pymol/stereochemistry/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/stereochemistry creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/syntax copying modules/pmg_qt/syntax/pmlparser.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/syntax copying modules/pmg_qt/syntax/python.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/syntax copying modules/pmg_qt/syntax/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/syntax copying modules/pmg_qt/syntax/pml.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/syntax creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/web/examples copying modules/web/examples/justhttpd.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/web/examples copying modules/web/examples/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/web/examples creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/skins copying modules/pmg_tk/skins/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/skins creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/startup copying modules/pmg_tk/startup/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/startup creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/skins/normal copying modules/pmg_tk/skins/normal/ModalWindow.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/skins/normal copying modules/pmg_tk/skins/normal/builder.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/skins/normal copying modules/pmg_tk/skins/normal/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/skins/normal creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/skins/demo copying modules/pmg_tk/skins/demo/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/skins/demo creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/fast copying modules/chempy/fast/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/fast creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/bmin copying modules/chempy/bmin/util.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/bmin copying modules/chempy/bmin/state.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/bmin copying modules/chempy/bmin/realtime.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/bmin copying modules/chempy/bmin/commands.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/bmin copying modules/chempy/bmin/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/bmin creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/tinker copying modules/chempy/tinker/amber.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/tinker copying modules/chempy/tinker/state.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/tinker copying modules/chempy/tinker/realtime.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/tinker copying modules/chempy/tinker/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/tinker copying modules/chempy/tinker/keyword.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/tinker creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/mmtf copying modules/chempy/mmtf/io.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/mmtf copying modules/chempy/mmtf/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/mmtf creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/champ copying modules/chempy/champ/assign.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/champ copying modules/chempy/champ/amber99.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/champ copying modules/chempy/champ/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/champ copying modules/chempy/champ/formal_charges.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/champ creating /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/fragments copying modules/chempy/fragments/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/fragments running egg_info writing modules/pymol.egg-info/PKG-INFO /usr/lib/python3/dist-packages/setuptools/_core_metadata.py:163: SetuptoolsDeprecationWarning: Invalid config. !! ******************************************************************************** newlines are not allowed in `summary` and will break in the future ******************************************************************************** !! write_field('Summary', single_line(summary)) writing dependency_links to modules/pymol.egg-info/dependency_links.txt writing entry points to modules/pymol.egg-info/entry_points.txt writing requirements to modules/pymol.egg-info/requires.txt writing top-level names to modules/pymol.egg-info/top_level.txt reading manifest file 'modules/pymol.egg-info/SOURCES.txt' adding license file 'LICENSE' adding license file 'AUTHORS' writing manifest file 'modules/pymol.egg-info/SOURCES.txt' copying modules/pmg_qt/forms/render.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/save_object.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/create_shortcut.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/change_confirm.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/load_aln.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/load_traj.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/png.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/load_map.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/shortcut_menu.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/colors.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/pluginitem.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/props.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/askpartial.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/fetch.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/load_mae.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/load_mtz.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/save_molecule.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/pluginmanager.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/movieexport.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms copying modules/pmg_qt/forms/help_shortcut.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms running build_ext cmake /build/reproducible-path/pymol-3.1.0+dfsg -DTARGET_NAME=_cmd -DCMAKE_LIBRARY_OUTPUT_DIRECTORY=/build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol -DCMAKE_BUILD_TYPE=Release -DALL_INC_DIR=include;contrib/uiuc/plugins/include;ov/src;layer0;layer1;layer2;layer3;layer4;layer5;build/generated;contrib/uiuc/plugins/molfile_plugin/src;/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include;/usr/include;/usr/include/freetype2;/usr/include/libxml2;/usr/include/python3.13;/usr/include/python3.13; -DALL_SRC=build/generated/ShaderText.cpp;contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c;contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c;contrib/uiuc/plugins/molfile_plugin/src/avsplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.c;contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c;contrib/uiuc/plugins/molfile_plugin/src/biomoccaplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/carplugin.c;contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/corplugin.c;contrib/uiuc/plugins/molfile_plugin/src/crdplugin.c;contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c;contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c;contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/dxplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c;contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/grdplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/hash.c;contrib/uiuc/plugins/molfile_plugin/src/inthash.c;contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c;contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/mapplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c;contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c;contrib/uiuc/plugins/molfile_plugin/src/netcdfplugin.c;contrib/uiuc/plugins/molfile_plugin/src/offplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c;contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c;contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c;contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c;contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c;contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c;layer0/Bezier.cpp;layer0/Block.cpp;layer0/CarveHelper.cpp;layer0/ContourSurf.cpp;layer0/Crystal.cpp;layer0/Err.cpp;layer0/Feedback.cpp;layer0/Field.cpp;layer0/File.cpp;layer0/GFXManager.cpp;layer0/GenericBuffer.cpp;layer0/GraphicsUtil.cpp;layer0/Isosurf.cpp;layer0/Map.cpp;layer0/Match.cpp;layer0/Matrix.cpp;layer0/MemoryDebug.cpp;layer0/MemoryUsage.cpp;layer0/MyPNG.cpp;layer0/Parse.cpp;layer0/Pixmap.cpp;layer0/PostProcess.cpp;layer0/PrintUtils.cpp;layer0/ShaderMgr.cpp;layer0/ShaderPreprocessor.cpp;layer0/ShaderPrg.cpp;layer0/Sphere.cpp;layer0/TTT.cpp;layer0/Tetsurf.cpp;layer0/Texture.cpp;layer0/Tracker.cpp;layer0/Triangle.cpp;layer0/Util.cpp;layer0/Util2.cpp;layer0/Vector.cpp;layer0/Word.cpp;layer0/ccealignmodule.cpp;layer0/marching_cubes.cpp;layer0/os_gl.cpp;layer1/Basis.cpp;layer1/ButMode.cpp;layer1/CGO.cpp;layer1/CGOGL.cpp;layer1/CGORenderer.cpp;layer1/COLLADA.cpp;layer1/Camera.cpp;layer1/Character.cpp;layer1/Color.cpp;layer1/Control.cpp;layer1/Extrude.cpp;layer1/Font.cpp;layer1/FontGLUT.cpp;layer1/FontGLUT8x13.cpp;layer1/FontGLUT9x15.cpp;layer1/FontGLUTHel10.cpp;layer1/FontGLUTHel12.cpp;layer1/FontGLUTHel18.cpp;layer1/FontType.cpp;layer1/ImageUtils.cpp;layer1/Movie.cpp;layer1/Ortho.cpp;layer1/P.cpp;layer1/PConv.cpp;layer1/Picking.cpp;layer1/Pop.cpp;layer1/PyMOLObject.cpp;layer1/Ray.cpp;layer1/Rep.cpp;layer1/Scene.cpp;layer1/SceneMouse.cpp;layer1/ScenePicking.cpp;layer1/SceneRay.cpp;layer1/SceneRender.cpp;layer1/SceneView.cpp;layer1/ScrollBar.cpp;layer1/Seq.cpp;layer1/Setting.cpp;layer1/Shaker.cpp;layer1/SymOp.cpp;layer1/SymOpPConv.cpp;layer1/SymOpTools.cpp;layer1/Symmetry.cpp;layer1/Text.cpp;layer1/TypeFace.cpp;layer1/View.cpp;layer1/Wizard.cpp;layer2/AssemblyHelpers.cpp;layer2/AtomInfo.cpp;layer2/AtomInfoHistory.cpp;layer2/BondTypeHistory.cpp;layer2/CifFile.cpp;layer2/CifMoleculeReader.cpp;layer2/CoordSet.cpp;layer2/DistSet.cpp;layer2/GadgetSet.cpp;layer2/HydrogenAdder.cpp;layer2/MmodTyping.cpp;layer2/MmtfMoleculeReader.cpp;layer2/Mol2Typing.cpp;layer2/MolV3000.cpp;layer2/ObjectAlignment.cpp;layer2/ObjectCGO.cpp;layer2/ObjectCallback.cpp;layer2/ObjectCurve.cpp;layer2/ObjectDist.cpp;layer2/ObjectGadget.cpp;layer2/ObjectGadgetRamp.cpp;layer2/ObjectGroup.cpp;layer2/ObjectMap.cpp;layer2/ObjectMesh.cpp;layer2/ObjectMolecule.cpp;layer2/ObjectMolecule2.cpp;layer2/ObjectMolecule3.cpp;layer2/ObjectSlice.cpp;layer2/ObjectSurface.cpp;layer2/ObjectVolume.cpp;layer2/RepAngle.cpp;layer2/RepCartoon.cpp;layer2/RepCylBond.cpp;layer2/RepDihedral.cpp;layer2/RepDistDash.cpp;layer2/RepDistLabel.cpp;layer2/RepDot.cpp;layer2/RepEllipsoid.cpp;layer2/RepLabel.cpp;layer2/RepMesh.cpp;layer2/RepNonbonded.cpp;layer2/RepNonbondedSphere.cpp;layer2/RepRibbon.cpp;layer2/RepSphere.cpp;layer2/RepSphereGenerate.cpp;layer2/RepSphereImmediate.cpp;layer2/RepSurface.cpp;layer2/RepWireBond.cpp;layer2/Sculpt.cpp;layer2/SculptCache.cpp;layer2/SideChainHelper.cpp;layer2/VFont.cpp;layer3/AtomIterators.cpp;layer3/CifDataValueFormatter.cpp;layer3/Editor.cpp;layer3/Executive.cpp;layer3/ExecutivePython.cpp;layer3/Interactions.cpp;layer3/MaeExportHelpers.cpp;layer3/MoleculeExporter.cpp;layer3/MovieScene.cpp;layer3/PlugIOManager.cpp;layer3/RingFinder.cpp;layer3/Seeker.cpp;layer3/Selector.cpp;layer3/SelectorTmp.cpp;layer3/SpecRec.cpp;layer3/SpecRecSpecial.cpp;layer4/Cmd.cpp;layer4/Menu.cpp;layer4/PopUp.cpp;layer5/PyMOL.cpp;layer5/TestPyMOL.cpp;layer5/main.cpp;ov/src/OVContext.cpp;ov/src/OVHeap.cpp;ov/src/OVHeapArray.cpp;ov/src/OVLexicon.cpp;ov/src/OVOneToAny.cpp;ov/src/OVOneToOne.cpp;ov/src/OVRandom.cpp;ov/src/ov_utility.cpp; -DALL_DEF=_PYMOL_LIBPNG;_PYMOL_FREETYPE;PYMOL_OPENMP;_PYMOL_VMD_PLUGINS;_HAVE_LIBXML;_PYMOL_NO_MSGPACKC;_PYMOL_NO_MAIN;_PYMOL_NUMPY; -DALL_LIB_DIR=/usr/lib; -DALL_LIB=png;freetype;xml2;GL;GLEW;netcdf; -DALL_COMP_ARGS=-Werror=return-type;-Wunused-variable;-Wno-switch;-Wno-narrowing;-Wno-char-subscripts;-O3;-fopenmp; -DALL_EXT_LINK=-fopenmp -DSHARED_SUFFIX=.cpython-313-aarch64-linux-gnu.so -- The C compiler identification is GNU 15.2.0 -- The CXX compiler identification is GNU 15.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Configuring done (0.9s) -- Generating done (0.1s) -- Build files have been written to: /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd cmake --build . --config Release -j12 gmake[1]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd' /usr/bin/cmake -S/build/reproducible-path/pymol-3.1.0+dfsg -B/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd/CMakeFiles /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[2]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd' /usr/bin/gmake -f CMakeFiles/_cmd.dir/build.make CMakeFiles/_cmd.dir/depend gmake[3]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd' cd /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/pymol-3.1.0+dfsg /build/reproducible-path/pymol-3.1.0+dfsg /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd/CMakeFiles/_cmd.dir/DependInfo.cmake "--color=" _cmd gmake[3]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd' /usr/bin/gmake -f CMakeFiles/_cmd.dir/build.make CMakeFiles/_cmd.dir/build gmake[3]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd' [ 1%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c.o [ 1%] Building CXX object CMakeFiles/_cmd.dir/build/generated/ShaderText.cpp.o [ 1%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c.o [ 1%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/avsplugin.cpp.o [ 2%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c [ 2%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp.o [ 2%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 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-D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat 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-I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp [ 6%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 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-I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/hash.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/hash.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/hash.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/hash.c [ 11%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/inthash.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include 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CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.cpp [ 15%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated 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CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp [ 17%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp [ 17%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp: In function ‘int {anonymous}::write_structure(void*, int, const molfile_atom_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp:1904:9: warning: unused variable ‘last_ctnumber’ [-Wunused-variable] 1904 | int last_ctnumber = -1; | ^~~~~~~~~~~~~ [ 18%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c [ 18%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp: In function ‘int getUniqueResID(char*, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:443:7: warning: unused variable ‘i’ [-Wunused-variable] 443 | int i, uid; | ^ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp: In function ‘int parseStructureFaster(molfile_atom_t*, int*, pdbxParser*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:484:47: warning: unused variable ‘j’ [-Wunused-variable] 484 | int i, count, atomdata, pos, idx, xyzcount, j; | ^ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:503:8: warning: unused variable ‘oldChain’ [-Wunused-variable] 503 | char oldChain[8]; | ^~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp: In function ‘bool readAngleBonds(molfile_atom_t*, pdbxParser*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:803:7: warning: unused variable ‘bondTable’ [-Wunused-variable] 803 | int bondTable[32]; | ^~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:807:15: warning: unused variable ‘j’ [-Wunused-variable] 807 | int i, pos, j, k; | ^ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:811:8: warning: unused variable ‘modelNum’ [-Wunused-variable] 811 | char modelNum[8]; | ^~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:822:20: warning: unused variable ‘atom’ [-Wunused-variable] 822 | molfile_atom_t * atom; | ^~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:884:7: warning: unused variable ‘test’ [-Wunused-variable] 884 | int test = parser->nbonds + bnum; | ^~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp: In function ‘bool readRMSDBonds(molfile_atom_t*, pdbxParser*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:984:7: warning: unused variable ‘bondTable’ [-Wunused-variable] 984 | int bondTable[32]; | ^~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:988:15: warning: unused variable ‘j’ [-Wunused-variable] 988 | int i, pos, j, k; | ^ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:991:8: warning: unused variable ‘modelNum’ [-Wunused-variable] 991 | char modelNum[8]; | ^~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:1002:20: warning: unused variable ‘atom’ [-Wunused-variable] 1002 | molfile_atom_t * atom; | ^~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp: In function ‘void* open_file_write(const char*, const char*, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp:1409:9: warning: unused variable ‘fd’ [-Wunused-variable] 1409 | FILE* fd; | ^~ [ 18%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp [ 19%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp [ 19%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp In file included from /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp:30: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/ply_c.h: In function ‘void put_element_ply(PlyFile*, void*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:459:7: warning: unused variable ‘i’ [-Wunused-variable] 459 | int i,j,k; | ^ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/ply_c.h: In function ‘void ascii_get_element(PlyFile*, char*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1407:7: warning: unused variable ‘i’ [-Wunused-variable] 1407 | int i,j,k; | ^ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/ply_c.h: In function ‘void binary_get_element(PlyFile*, char*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1541:7: warning: unused variable ‘i’ [-Wunused-variable] 1541 | int i,j,k; | ^ [ 20%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c [ 20%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c.o [ 21%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.cpp.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.cpp [ 21%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c.o /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/ply_c.h: In function ‘char* recreate_command_line(int, char**)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1334:11: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 1334 | line[0] = '\0'; | ~~~~~~~~^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/ply_c.h:1333:26: note: destination object of size 0 allocated by ‘malloc’ 1333 | line = (char *) malloc (sizeof(char) * len); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~ /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c [ 21%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp [ 22%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp [ 22%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp [ 23%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c [ 23%] Building CXX object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp [ 24%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c [ 24%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘std::string framefile(const std::string&, size_t, size_t, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:675:35: warning: ‘sprintf’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 675 | sprintf(answer, "%03x/", d1); | ^ In function ‘std::string DDreldir(const std::string&, int, int)’, inlined from ‘std::string framefile(const std::string&, size_t, size_t, int, int)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:779:23: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:675:20: note: ‘sprintf’ output between 5 and 10 bytes into a destination of size 9 675 | sprintf(answer, "%03x/", d1); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘std::string framefile(const std::string&, size_t, size_t, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:673:35: warning: ‘%03x’ directive writing between 3 and 8 bytes into a region of size between 0 and 5 [-Wformat-overflow=] 673 | sprintf(answer, "%03x/%03x/", d1, d2); | ^~~~ In function ‘std::string DDreldir(const std::string&, int, int)’, inlined from ‘std::string framefile(const std::string&, size_t, size_t, int, int)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:779:23: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:673:29: note: directive argument in the range [0, 2147483646] 673 | sprintf(answer, "%03x/%03x/", d1, d2); | ^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:673:20: note: ‘sprintf’ output between 9 and 19 bytes into a destination of size 9 673 | sprintf(answer, "%03x/%03x/", d1, d2); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 24%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c [ 25%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c [ 26%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c [ 26%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘void DDmkdir(const std::string&, mode_t, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:714:23: warning: ‘%03x’ directive writing between 3 and 8 bytes into a region of size 6 [-Wformat-overflow=] 714 | sprintf(sub, "%03x/", i); | ^~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:714:22: note: directive argument in the range [0, 2147483646] 714 | sprintf(sub, "%03x/", i); | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:714:16: note: ‘sprintf’ output between 5 and 10 bytes into a destination of size 6 714 | sprintf(sub, "%03x/", i); | ~~~~~~~^~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:722:30: warning: ‘%03x’ directive writing between 3 and 8 bytes into a region of size 6 [-Wformat-overflow=] 722 | sprintf(subsub, "%03x", j); | ^~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:722:29: note: directive argument in the range [0, 2147483646] 722 | sprintf(subsub, "%03x", j); | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:722:20: note: ‘sprintf’ output between 4 and 9 bytes into a destination of size 6 722 | sprintf(subsub, "%03x", j); | ~~~~~~~^~~~~~~~~~~~~~~~~~~ [ 26%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c.o -MF CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c.o.d -o CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c.o -c /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c [ 27%] Building C object CMakeFiles/_cmd.dir/contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c.o /usr/bin/cc -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 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-I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Err.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Err.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Err.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Err.cpp [ 31%] Building CXX object CMakeFiles/_cmd.dir/layer0/Feedback.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 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-I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Field.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Field.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Field.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Field.cpp [ 32%] Building CXX object CMakeFiles/_cmd.dir/layer0/File.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 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-I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/GFXManager.cpp.o -MF CMakeFiles/_cmd.dir/layer0/GFXManager.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/GFXManager.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/GFXManager.cpp [ 33%] Building CXX object CMakeFiles/_cmd.dir/layer0/GenericBuffer.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS 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-I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/GraphicsUtil.cpp.o -MF CMakeFiles/_cmd.dir/layer0/GraphicsUtil.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/GraphicsUtil.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/GraphicsUtil.cpp [ 34%] Building CXX object CMakeFiles/_cmd.dir/layer0/Isosurf.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG 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-Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Isosurf.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Isosurf.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Isosurf.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Isosurf.cpp [ 34%] Building CXX object CMakeFiles/_cmd.dir/layer0/Map.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Map.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Map.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Map.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Map.cpp In file included from /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:71: In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1497:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 4 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: destination object ‘nx’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1497:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: at offset [8, 12] into destination object ‘nx’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1497:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: at offset [16, 20] into destination object ‘nx’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1497:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: at offset [24, 28] into destination object ‘nx’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1497:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: at offset [32, 36] into destination object ‘nx’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1497:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: at offset [40, 44] into destination object ‘nx’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1497:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:11: note: at offset [48, 52] into destination object ‘nx’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1498:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 4 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: destination object ‘ny’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1498:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: at offset [8, 12] into destination object ‘ny’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1498:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: at offset [16, 20] into destination object ‘ny’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1498:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: at offset [24, 28] into destination object ‘ny’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1498:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: at offset [32, 36] into destination object ‘ny’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1498:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: at offset [40, 44] into destination object ‘ny’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1498:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:15: note: at offset [48, 52] into destination object ‘ny’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1499:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 4 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: destination object ‘nz’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1499:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: at offset [8, 12] into destination object ‘nz’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1499:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: at offset [16, 20] into destination object ‘nz’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1499:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: at offset [24, 28] into destination object ‘nz’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1499:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: at offset [32, 36] into destination object ‘nz’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1499:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: at offset [40, 44] into destination object ‘nz’ of size 4 1494 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1499:24: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In function ‘int handle_posn_momentum_v1({anonymous}::BlobMap&, uint32_t, bool, const float*, molfile_timestep_t*)’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1494:19: note: at offset [48, 52] into destination object ‘nz’ of size 4 1494 | int32_t nx, ny, nz; | ^~ [ 35%] Building CXX object CMakeFiles/_cmd.dir/layer0/Match.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Match.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Match.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Match.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Match.cpp [ 35%] Building CXX object CMakeFiles/_cmd.dir/layer0/Matrix.cpp.o [ 35%] Building CXX object CMakeFiles/_cmd.dir/layer0/MemoryDebug.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Matrix.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Matrix.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Matrix.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Matrix.cpp /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/MemoryDebug.cpp.o -MF CMakeFiles/_cmd.dir/layer0/MemoryDebug.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/MemoryDebug.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/MemoryDebug.cpp [ 36%] Building CXX object CMakeFiles/_cmd.dir/layer0/MemoryUsage.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 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-I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/MyPNG.cpp.o -MF CMakeFiles/_cmd.dir/layer0/MyPNG.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/MyPNG.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/MyPNG.cpp [ 37%] Building CXX object CMakeFiles/_cmd.dir/layer0/Parse.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Parse.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Parse.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Parse.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Parse.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer0/MemoryUsage.cpp: In function ‘size_t pymol::memory_usage()’: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/MemoryUsage.cpp:38:21: warning: use of assignment suppression and length modifier together in gnu_scanf format [-Wformat=] 38 | std::fscanf(fp, "%*zu%zu", &vmRSS); | ^~~~~~~~~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_wrapped_v1({anonymous}::BlobMap&, uint32_t, bool, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1552:26, inlined from ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1751:29: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 4 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In member function ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1548:21: note: destination object ‘nz’ of size 4 1548 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_wrapped_v1({anonymous}::BlobMap&, uint32_t, bool, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1552:26, inlined from ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1751:29: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In member function ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1548:21: note: at offset [8, 12] into destination object ‘nz’ of size 4 1548 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_wrapped_v1({anonymous}::BlobMap&, uint32_t, bool, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1552:26, inlined from ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1751:29: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In member function ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1548:21: note: at offset [16, 20] into destination object ‘nz’ of size 4 1548 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_wrapped_v1({anonymous}::BlobMap&, uint32_t, bool, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1552:26, inlined from ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1751:29: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In member function ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1548:21: note: at offset [24, 28] into destination object ‘nz’ of size 4 1548 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_wrapped_v1({anonymous}::BlobMap&, uint32_t, bool, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1552:26, inlined from ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1751:29: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In member function ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1548:21: note: at offset [32, 36] into destination object ‘nz’ of size 4 1548 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_wrapped_v1({anonymous}::BlobMap&, uint32_t, bool, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1552:26, inlined from ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1751:29: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In member function ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1548:21: note: at offset [40, 44] into destination object ‘nz’ of size 4 1548 | int32_t nx, ny, nz; | ^~ In function ‘void swap4_unaligned(void*, long int)’, inlined from ‘void {anonymous}::Blob::get_float(float*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:615:36, inlined from ‘void {anonymous}::Blob::get_int32(int32_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:606:10, inlined from ‘int handle_wrapped_v1({anonymous}::BlobMap&, uint32_t, bool, molfile_timestep_t*)’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1552:26, inlined from ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’ at /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1751:29: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/endianswap.h:54:16: warning: writing 8 bytes into a region of size 0 [-Wstringop-overflow=] 54 | dataptr[0] = dataptr[3]; | ~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp: In member function ‘int desres::molfile::DtrReader::frame_from_bytes(const void*, uint64_t, molfile_timestep_t*) const’: /build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp:1548:21: note: at offset [48, 52] into destination object ‘nz’ of size 4 1548 | int32_t nx, ny, nz; | ^~ [ 37%] Building CXX object CMakeFiles/_cmd.dir/layer0/Pixmap.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Pixmap.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Pixmap.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Pixmap.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Pixmap.cpp [ 37%] Building CXX object CMakeFiles/_cmd.dir/layer0/PostProcess.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/PostProcess.cpp.o -MF CMakeFiles/_cmd.dir/layer0/PostProcess.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/PostProcess.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/PostProcess.cpp [ 38%] Building CXX object CMakeFiles/_cmd.dir/layer0/PrintUtils.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/PrintUtils.cpp.o -MF CMakeFiles/_cmd.dir/layer0/PrintUtils.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/PrintUtils.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/PrintUtils.cpp [ 38%] Building CXX object CMakeFiles/_cmd.dir/layer0/ShaderMgr.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG 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-Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/ShaderMgr.cpp.o -MF CMakeFiles/_cmd.dir/layer0/ShaderMgr.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/ShaderMgr.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/ShaderMgr.cpp [ 39%] Building CXX object CMakeFiles/_cmd.dir/layer0/ShaderPreprocessor.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 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-I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/Word.cpp.o -MF CMakeFiles/_cmd.dir/layer0/Word.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/Word.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Word.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Texture.cpp: In function ‘bool TextureIsCharTextured(PyMOLGlobals*, int, float*)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Texture.cpp:130:9: warning: unused variable 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-I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer0/ccealignmodule.cpp.o -MF CMakeFiles/_cmd.dir/layer0/ccealignmodule.cpp.o.d -o CMakeFiles/_cmd.dir/layer0/ccealignmodule.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer0/ccealignmodule.cpp [ 44%] Building CXX object CMakeFiles/_cmd.dir/layer0/marching_cubes.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include 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-I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/COLLADA.cpp.o -MF CMakeFiles/_cmd.dir/layer1/COLLADA.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/COLLADA.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/COLLADA.cpp /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Camera.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Camera.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Camera.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Camera.cpp [ 48%] Building CXX object CMakeFiles/_cmd.dir/layer1/Character.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Character.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Character.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Character.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Character.cpp [ 48%] Building CXX object CMakeFiles/_cmd.dir/layer1/Color.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Color.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Color.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Color.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Color.cpp [ 49%] Building CXX object CMakeFiles/_cmd.dir/layer1/Control.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Control.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Control.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Control.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Control.cpp [ 49%] Building CXX object CMakeFiles/_cmd.dir/layer1/Extrude.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Extrude.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Extrude.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Extrude.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Extrude.cpp [ 50%] Building CXX object CMakeFiles/_cmd.dir/layer1/Font.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Font.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Font.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Font.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Font.cpp [ 50%] Building CXX object CMakeFiles/_cmd.dir/layer1/FontGLUT.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/FontGLUT.cpp.o -MF CMakeFiles/_cmd.dir/layer1/FontGLUT.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/FontGLUT.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/FontGLUT.cpp In file included from /build/reproducible-path/pymol-3.1.0+dfsg/include/tnt/tnt.h:45, from /build/reproducible-path/pymol-3.1.0+dfsg/layer0/ccealignmodule.cpp:39: In member function ‘void TNT::Array1D::set_(T*, T*, const T&) [with T = double]’, inlined from ‘TNT::Array1D::Array1D(int, const T&) [with T = double]’ at /build/reproducible-path/pymol-3.1.0+dfsg/include/tnt/tnt_array1d.h:119:6, inlined from ‘PyObject* findBest(pcePoint, pcePoint, pathCache, int, int, int)’ at /build/reproducible-path/pymol-3.1.0+dfsg/layer0/ccealignmodule.cpp:506:28: /build/reproducible-path/pymol-3.1.0+dfsg/include/tnt/tnt_array1d.h:283:20: warning: ‘void* __builtin_memset(void*, int, long unsigned int)’ specified bound between 18446744056529682432 and 18446744073709551608 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=] 283 | *p = a; | ~~~^~~ [ 51%] Building CXX object CMakeFiles/_cmd.dir/layer1/FontGLUT8x13.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/FontGLUT8x13.cpp.o -MF CMakeFiles/_cmd.dir/layer1/FontGLUT8x13.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/FontGLUT8x13.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/FontGLUT8x13.cpp [ 51%] Building CXX object CMakeFiles/_cmd.dir/layer1/FontGLUT9x15.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE 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-I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Picking.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Picking.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Picking.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Picking.cpp [ 56%] Building CXX object CMakeFiles/_cmd.dir/layer1/Pop.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Pop.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Pop.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Pop.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Pop.cpp [ 56%] Building CXX object CMakeFiles/_cmd.dir/layer1/PyMOLObject.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/PyMOLObject.cpp.o -MF CMakeFiles/_cmd.dir/layer1/PyMOLObject.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/PyMOLObject.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/PyMOLObject.cpp [ 56%] Building CXX object CMakeFiles/_cmd.dir/layer1/Ray.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Ray.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Ray.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Ray.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Ray.cpp [ 57%] Building CXX object CMakeFiles/_cmd.dir/layer1/Rep.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Rep.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Rep.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Rep.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Rep.cpp [ 57%] Building CXX object CMakeFiles/_cmd.dir/layer1/Scene.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Scene.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Scene.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Scene.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Scene.cpp [ 58%] Building CXX object CMakeFiles/_cmd.dir/layer1/SceneMouse.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/SceneMouse.cpp.o -MF CMakeFiles/_cmd.dir/layer1/SceneMouse.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/SceneMouse.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SceneMouse.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer1/PyMOLObject.cpp: In function ‘int ObjectMotion(pymol::CObject*, MViewAction, int, int, float, float, int, float, int, int, int, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer1/PyMOLObject.cpp:193:15: warning: ignoring return value of ‘constexpr const _Tp& std::max(const _Tp&, const _Tp&) [with _Tp = int]’, declared with attribute ‘nodiscard’ [-Wunused-result] 193 | std::max(0, first); | ~~~~~~~~^~~~~~~~~~ In file included from /usr/include/c++/15/bits/stl_uninitialized.h:63, from /usr/include/c++/15/memory:71, from /build/reproducible-path/pymol-3.1.0+dfsg/layer0/os_python.h:23, from /build/reproducible-path/pymol-3.1.0+dfsg/layer1/PyMOLObject.cpp:17: /usr/include/c++/15/bits/stl_algobase.h:258:5: note: declared here 258 | max(const _Tp& __a, const _Tp& __b) | ^~~ [ 58%] Building CXX object CMakeFiles/_cmd.dir/layer1/ScenePicking.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include 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-I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/SceneRay.cpp.o -MF CMakeFiles/_cmd.dir/layer1/SceneRay.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/SceneRay.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SceneRay.cpp [ 59%] Building CXX object CMakeFiles/_cmd.dir/layer1/SceneRender.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/SceneRender.cpp.o -MF CMakeFiles/_cmd.dir/layer1/SceneRender.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/SceneRender.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SceneRender.cpp In file included from /usr/include/c++/15/bits/stl_algobase.h:64, from /usr/include/c++/15/bits/specfun.h:43, from /usr/include/c++/15/cmath:3913, from /usr/include/c++/15/math.h:36, from /build/reproducible-path/pymol-3.1.0+dfsg/layer0/os_std.h:24, from /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Scene.cpp:18: /usr/include/c++/15/bits/stl_pair.h: In instantiation of ‘constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = float&; _T2 = float&; typename __strip_reference_wrapper::type>::__type = float; typename decay<_Tp>::type = float; typename __strip_reference_wrapper::type>::__type = float; typename decay<_Tp2>::type = float]’: /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Scene.cpp:1469:24: required from here 1469 | return std::make_pair(clip.m_front, clip.m_back); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_pair.h:1164:5: note: parameter passing for argument of type ‘std::pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 1164 | make_pair(_T1&& __x, _T2&& __y) | ^~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SceneMouse.cpp: In function ‘void SceneClickTransformObject(PyMOLGlobals*, pymol::CObject*, const NamedPicking&, int, bool)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SceneMouse.cpp:455:32: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 237 [-Wformat-truncation=] 455 | " You clicked %s -> (%s)\n", buffer.c_str(), name ENDFB(G); | ^~ ~~~~ In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SceneMouse.cpp:19: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output 21 or more bytes (assuming 276) into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SceneMouse.cpp:454:11: note: in expansion of macro ‘PRINTFB’ 454 | PRINTFB(G, FB_Scene, FB_Results) | ^~~~~~~ [ 59%] Building CXX object CMakeFiles/_cmd.dir/layer1/SceneView.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/SceneView.cpp.o -MF CMakeFiles/_cmd.dir/layer1/SceneView.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/SceneView.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SceneView.cpp [ 60%] Building CXX object CMakeFiles/_cmd.dir/layer1/ScrollBar.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/ScrollBar.cpp.o -MF CMakeFiles/_cmd.dir/layer1/ScrollBar.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/ScrollBar.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/ScrollBar.cpp [ 60%] Building CXX object CMakeFiles/_cmd.dir/layer1/Seq.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Seq.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Seq.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Seq.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Seq.cpp [ 61%] Building CXX object CMakeFiles/_cmd.dir/layer1/Setting.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Setting.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Setting.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Setting.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Setting.cpp [ 61%] Building CXX object CMakeFiles/_cmd.dir/layer1/Shaker.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Shaker.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Shaker.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Shaker.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Shaker.cpp [ 62%] Building CXX object CMakeFiles/_cmd.dir/layer1/SymOp.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/SymOp.cpp.o -MF CMakeFiles/_cmd.dir/layer1/SymOp.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/SymOp.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SymOp.cpp [ 62%] Building CXX object CMakeFiles/_cmd.dir/layer1/SymOpPConv.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/SymOpPConv.cpp.o -MF CMakeFiles/_cmd.dir/layer1/SymOpPConv.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/SymOpPConv.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SymOpPConv.cpp [ 62%] Building CXX object 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-ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/SymOpTools.cpp.o -MF CMakeFiles/_cmd.dir/layer1/SymOpTools.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/SymOpTools.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SymOpTools.cpp [ 63%] Building CXX object CMakeFiles/_cmd.dir/layer1/Symmetry.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 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/build/reproducible-path/pymol-3.1.0+dfsg/layer1/Symmetry.cpp [ 63%] Building CXX object CMakeFiles/_cmd.dir/layer1/Text.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer1/Text.cpp.o -MF CMakeFiles/_cmd.dir/layer1/Text.cpp.o.d -o CMakeFiles/_cmd.dir/layer1/Text.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Text.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SymOp.cpp: In member function ‘std::string pymol::SymOp::to_string() const’: /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SymOp.cpp:37:32: warning: ‘%d’ directive output may be truncated writing between 1 and 4 bytes into a region of size between 0 and 5 [-Wformat-truncation=] 37 | std::snprintf(code, 8, "%u_%d%d%d", index + 1, x + 5, y + 5, z + 5); | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SymOp.cpp:37:26: note: directive argument in the range [-123, 132] 37 | std::snprintf(code, 8, "%u_%d%d%d", index + 1, x + 5, y + 5, z + 5); | ^~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SymOp.cpp:37:26: note: directive argument in the range [-123, 132] /build/reproducible-path/pymol-3.1.0+dfsg/layer1/SymOp.cpp:37:16: note: ‘snprintf’ output between 6 and 17 bytes into a destination of size 8 37 | std::snprintf(code, 8, "%u_%d%d%d", index + 1, x + 5, y + 5, z + 5); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 64%] Building CXX object CMakeFiles/_cmd.dir/layer1/TypeFace.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include 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-I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/AtomInfo.cpp.o -MF CMakeFiles/_cmd.dir/layer2/AtomInfo.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/AtomInfo.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/AtomInfo.cpp [ 66%] Building CXX object CMakeFiles/_cmd.dir/layer2/AtomInfoHistory.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/AtomInfoHistory.cpp.o -MF CMakeFiles/_cmd.dir/layer2/AtomInfoHistory.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/AtomInfoHistory.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/AtomInfoHistory.cpp [ 66%] Building CXX object CMakeFiles/_cmd.dir/layer2/BondTypeHistory.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN 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-mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/BondTypeHistory.cpp.o -MF CMakeFiles/_cmd.dir/layer2/BondTypeHistory.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/BondTypeHistory.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/BondTypeHistory.cpp [ 67%] Building CXX object CMakeFiles/_cmd.dir/layer2/CifFile.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 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/build/reproducible-path/pymol-3.1.0+dfsg/layer2/GadgetSet.cpp [ 69%] Building CXX object CMakeFiles/_cmd.dir/layer2/HydrogenAdder.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/HydrogenAdder.cpp.o -MF CMakeFiles/_cmd.dir/layer2/HydrogenAdder.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/HydrogenAdder.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/HydrogenAdder.cpp [ 69%] Building CXX object CMakeFiles/_cmd.dir/layer2/MmodTyping.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include 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-I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/MolV3000.cpp.o -MF CMakeFiles/_cmd.dir/layer2/MolV3000.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/MolV3000.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/MolV3000.cpp [ 71%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectAlignment.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG 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-ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/ObjectCallback.cpp.o -MF CMakeFiles/_cmd.dir/layer2/ObjectCallback.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/ObjectCallback.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectCallback.cpp [ 72%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectCurve.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 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-I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/ObjectDist.cpp.o -MF CMakeFiles/_cmd.dir/layer2/ObjectDist.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/ObjectDist.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectDist.cpp [ 73%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectGadget.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include 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-D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/ObjectMolecule2.cpp.o -MF CMakeFiles/_cmd.dir/layer2/ObjectMolecule2.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/ObjectMolecule2.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule2.cpp [ 76%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectMolecule3.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/ObjectMolecule3.cpp.o -MF CMakeFiles/_cmd.dir/layer2/ObjectMolecule3.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/ObjectMolecule3.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule3.cpp [ 76%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectSlice.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/ObjectSlice.cpp.o -MF CMakeFiles/_cmd.dir/layer2/ObjectSlice.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/ObjectSlice.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSlice.cpp [ 77%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectSurface.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 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/build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSurface.cpp [ 77%] Building CXX object CMakeFiles/_cmd.dir/layer2/ObjectVolume.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/ObjectVolume.cpp.o -MF CMakeFiles/_cmd.dir/layer2/ObjectVolume.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/ObjectVolume.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectVolume.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMesh.cpp: In member function ‘virtual void ObjectMesh::update()’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMesh.cpp:508:39: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 226 [-Wformat-truncation=] 508 | "ObjectMeshUpdate-Error: map '%s' has been deleted.\n", | ^~ In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMesh.cpp:28: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 50 and 305 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMesh.cpp:507:9: note: in expansion of macro ‘PRINTFB’ 507 | PRINTFB(I->G, FB_ObjectMesh, FB_Errors) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMesh.cpp:541:38: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 232 [-Wformat-truncation=] 541 | " ObjectMesh: updating \"%s\".\n", I->Name ENDFB(G); | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 27 and 282 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMesh.cpp:540:13: note: in expansion of macro ‘PRINTFB’ 540 | PRINTFB(G, FB_ObjectMesh, FB_Details) | ^~~~~~~ [ 78%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepAngle.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepAngle.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepAngle.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepAngle.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepAngle.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMesh.cpp: In function ‘void ObjectMeshDump(ObjectMesh*, const char*, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMesh.cpp:333:25: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 238 [-Wformat-truncation=] 333 | " ObjectMeshDump: %s written to %s\n", I->Name, fname ENDFB(I->G); | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output 31 or more bytes (assuming 286) into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMesh.cpp:332:7: note: in expansion of macro ‘PRINTFB’ 332 | PRINTFB(I->G, FB_ObjectMesh, FB_Actions) | ^~~~~~~ [ 78%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepCartoon.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepCartoon.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepCartoon.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepCartoon.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepCartoon.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSlice.cpp: In member function ‘virtual void ObjectSlice::update()’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSlice.cpp:639:42: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 225 [-Wformat-truncation=] 639 | "ObjectSliceUpdate-Error: map '%s' has been deleted.\n", oss->MapName | ^~ In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSlice.cpp:44: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 51 and 306 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSlice.cpp:638:9: note: in expansion of macro ‘PRINTFB’ 638 | PRINTFB(I->G, FB_ObjectSlice, FB_Errors) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSlice.cpp:650:39: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 231 [-Wformat-truncation=] 650 | " ObjectSlice: updating \"%s\".\n", I->Name ENDFB(I->G); | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 28 and 283 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSlice.cpp:649:11: note: in expansion of macro ‘PRINTFB’ 649 | PRINTFB(I->G, FB_ObjectSlice, FB_Blather) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSurface.cpp: In function ‘void ObjectSurfaceDump(ObjectSurface*, const char*, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSurface.cpp:269:30: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 235 [-Wformat-truncation=] 269 | " ObjectSurfaceDump: %s written to %s\n", I->Name, fname ENDFB(I->G); | ^~ In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSurface.cpp:45: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output 34 or more bytes (assuming 289) into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSurface.cpp:268:7: note: in expansion of macro ‘PRINTFB’ 268 | PRINTFB(I->G, FB_ObjectSurface, FB_Actions) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectVolume.cpp: In function ‘ObjectMapState* ObjectVolumeStateGetMapState(ObjectVolumeState*)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectVolume.cpp:80:33: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 230 [-Wformat-truncation=] 80 | "ObjectVolume-Error: map '%s' has been deleted.\n", vs->MapName | ^~ In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectVolume.cpp:47: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 46 and 301 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectVolume.cpp:79:5: note: in expansion of macro ‘PRINTFB’ 79 | PRINTFB(G, FB_ObjectVolume, FB_Errors) | ^~~~~~~ [ 78%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepCylBond.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepCylBond.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepCylBond.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepCylBond.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepCylBond.cpp [ 79%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepDihedral.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepDihedral.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepDihedral.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepDihedral.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepDihedral.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSurface.cpp: In member function ‘virtual void ObjectSurface::update()’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSurface.cpp:494:43: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 229 [-Wformat-truncation=] 494 | " ObjectSurface: updating \"%s\".\n", I->Name ENDFB(I->G); | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 30 and 285 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectSurface.cpp:493:13: note: in expansion of macro ‘PRINTFB’ 493 | PRINTFB(I->G, FB_ObjectSurface, FB_Details) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp: In function ‘CoordSet* ObjectMoleculeMOLStr2CoordSet.constprop(PyMOLGlobals*, const char*, AtomInfoType**, const char**)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp:7597:37: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 224 [-Wformat-truncation=] 7597 | " ObjMolMOLStr2CoordSet: title '%s'\n", nameTmp ENDFB(G) | ^~ ~~~~~~~ In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp:49: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 34 and 289 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp:7596:3: note: in expansion of macro ‘PRINTFB’ 7596 | PRINTFB(G, FB_ObjectMolecule, FB_Blather) | ^~~~~~~ [ 79%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepDistDash.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepDistDash.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepDistDash.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepDistDash.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepDistDash.cpp [ 80%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepDistLabel.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepDistLabel.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepDistLabel.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepDistLabel.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepDistLabel.cpp [ 80%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepDot.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepDot.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepDot.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepDot.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepDot.cpp [ 81%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepEllipsoid.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepEllipsoid.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepEllipsoid.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepEllipsoid.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepEllipsoid.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp: In function ‘void ObjectMapDump(const ObjectMap*, const char*, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:5984:24: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 239 [-Wformat-truncation=] 5984 | " ObjectMapDump: %s written to %s\n", om->Name, fname ENDFB(om->G); | ^~ In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:48: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output 30 or more bytes (assuming 285) into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:5983:5: note: in expansion of macro ‘PRINTFB’ 5983 | PRINTFB(om->G, FB_ObjectMap, FB_Actions) | ^~~~~~~ [ 81%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepLabel.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepLabel.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepLabel.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepLabel.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepLabel.cpp [ 81%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepMesh.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 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/build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepMesh.cpp [ 82%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepNonbonded.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepNonbonded.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepNonbonded.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepNonbonded.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepNonbonded.cpp [ 82%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepNonbondedSphere.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepNonbondedSphere.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepNonbondedSphere.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepNonbondedSphere.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepNonbondedSphere.cpp [ 83%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepRibbon.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepRibbon.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepRibbon.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepRibbon.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepRibbon.cpp [ 83%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepSphere.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepSphere.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepSphere.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepSphere.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepSphere.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp: In member function ‘virtual void ObjectMolecule::update()’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp:10623:82: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size between 181 and 191 [-Wformat-truncation=] 10623 | " ObjectMolecule-DEBUG: updating representations for state %d of \"%s\".\n", | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 68 and 333 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp:10622:13: note: in expansion of macro ‘PRINTFB’ 10622 | PRINTFB(G, FB_ObjectMolecule, FB_Blather) | ^~~~~~~ [ 83%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepSphereGenerate.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepSphereGenerate.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepSphereGenerate.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepSphereGenerate.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepSphereGenerate.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp: In function ‘int ObjectMoleculeMoveAtom(ObjectMolecule*, int, int, const float*, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp:10749:43: warning: ‘%s’ directive writing up to 1023 bytes into a region of size 1004 [-Wformat-overflow=] 10749 | sprintf(line, "cmd.translate_atom(\"%s\",%15.9f,%15.9f,%15.9f,%d,%d,%d)\n", | ^~ 10750 | buffer, v[0], v[1], v[2], state + 1, mode, 0); | ~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp:10749:21: note: directive argument in the range [-2147483647, 2147483647] 10749 | sprintf(line, "cmd.translate_atom(\"%s\",%15.9f,%15.9f,%15.9f,%d,%d,%d)\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule.cpp:10749:14: note: ‘sprintf’ output between 78 and 2036 bytes into a destination of size 1024 10749 | sprintf(line, "cmd.translate_atom(\"%s\",%15.9f,%15.9f,%15.9f,%d,%d,%d)\n", | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 10750 | buffer, v[0], v[1], v[2], state + 1, mode, 0); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule2.cpp: In function ‘int ObjectMoleculeAddPseudoatom(ObjectMolecule*, int, const char*, const char*, const char*, const char*, const char*, const char*, float, int, float, float, const char*, const float*, int, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule2.cpp:335:27: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 238 [-Wformat-truncation=] 335 | " ObjMol: created %s/%s/%s/%s`%d%c/%s\n", | ^~ In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule2.cpp:36: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 26 and 291 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMolecule2.cpp:334:7: note: in expansion of macro ‘PRINTFB’ 334 | PRINTFB(G, FB_ObjectMolecule, FB_Actions) | ^~~~~~~ [ 84%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepSphereImmediate.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/RepSphereImmediate.cpp.o -MF CMakeFiles/_cmd.dir/layer2/RepSphereImmediate.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/RepSphereImmediate.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/RepSphereImmediate.cpp [ 84%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepSurface.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 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[ 85%] Building CXX object CMakeFiles/_cmd.dir/layer2/RepWireBond.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 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/build/reproducible-path/pymol-3.1.0+dfsg/layer2/Sculpt.cpp [ 86%] Building CXX object CMakeFiles/_cmd.dir/layer2/SculptCache.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer2/SculptCache.cpp.o -MF CMakeFiles/_cmd.dir/layer2/SculptCache.cpp.o.d -o CMakeFiles/_cmd.dir/layer2/SculptCache.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer2/SculptCache.cpp [ 86%] Building CXX object CMakeFiles/_cmd.dir/layer2/SideChainHelper.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include 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-I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable 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-Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/Executive.cpp.o -MF CMakeFiles/_cmd.dir/layer3/Executive.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/Executive.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp [ 89%] Building CXX object CMakeFiles/_cmd.dir/layer3/ExecutivePython.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 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-D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/Interactions.cpp.o -MF CMakeFiles/_cmd.dir/layer3/Interactions.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/Interactions.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Interactions.cpp [ 89%] Building CXX object CMakeFiles/_cmd.dir/layer3/MaeExportHelpers.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/MaeExportHelpers.cpp.o -MF CMakeFiles/_cmd.dir/layer3/MaeExportHelpers.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/MaeExportHelpers.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/MaeExportHelpers.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp: In function ‘ObjectMap* ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, const char*, int, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:2962:22: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 241 [-Wformat-truncation=] 2962 | " PHIStrToMap: %s\n", cc ENDFB(I->G); | ^~ ~~ In function ‘int ObjectMapPHIStrToMap(ObjectMap*, char*, int, int, int)’, inlined from ‘ObjectMap* ObjectMapReadPHIStr(PyMOLGlobals*, ObjectMap*, char*, int, int, int)’ at /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4804:25, inlined from ‘ObjectMap* ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, const char*, int, int, int, int)’ at /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4836:28: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 16 and 1039 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:2961:5: note: in expansion of macro ‘PRINTFB’ 2961 | PRINTFB(I->G, FB_ObjectMap, FB_Details) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp: In function ‘ObjectMap* ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, const char*, int, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:2971:22: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 241 [-Wformat-truncation=] 2971 | " PHIStrToMap: %s\n", cc ENDFB(I->G); | ^~ ~~ In function ‘int ObjectMapPHIStrToMap(ObjectMap*, char*, int, int, int)’, inlined from ‘ObjectMap* ObjectMapReadPHIStr(PyMOLGlobals*, ObjectMap*, char*, int, int, int)’ at /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4804:25, inlined from ‘ObjectMap* ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, const char*, int, int, int, int)’ at /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4836:28: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 16 and 1039 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:2970:5: note: in expansion of macro ‘PRINTFB’ 2970 | PRINTFB(I->G, FB_ObjectMap, FB_Details) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp: In function ‘ObjectMap* ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, const char*, int, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:2977:22: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 241 [-Wformat-truncation=] 2977 | " PHIStrToMap: %s\n", cc ENDFB(I->G); | ^~ ~~ In function ‘int ObjectMapPHIStrToMap(ObjectMap*, char*, int, int, int)’, inlined from ‘ObjectMap* ObjectMapReadPHIStr(PyMOLGlobals*, ObjectMap*, char*, int, int, int)’ at /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4804:25, inlined from ‘ObjectMap* ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, const char*, int, int, int, int)’ at /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4836:28: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 16 and 1039 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:2976:5: note: in expansion of macro ‘PRINTFB’ 2976 | PRINTFB(I->G, FB_ObjectMap, FB_Details) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp: In function ‘ObjectMap* ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, const char*, int, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:3059:22: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 241 [-Wformat-truncation=] 3059 | " PHIStrToMap: %s\n", cc ENDFB(I->G); | ^~ ~~ In function ‘int ObjectMapPHIStrToMap(ObjectMap*, char*, int, int, int)’, inlined from ‘ObjectMap* ObjectMapReadPHIStr(PyMOLGlobals*, ObjectMap*, char*, int, int, int)’ at /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4804:25, inlined from ‘ObjectMap* ObjectMapLoadPHI(PyMOLGlobals*, ObjectMap*, const char*, int, int, int, int)’ at /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:4836:28: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 16 and 1039 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer2/ObjectMap.cpp:3058:5: note: in expansion of macro ‘PRINTFB’ 3058 | PRINTFB(I->G, FB_ObjectMap, FB_Details) | ^~~~~~~ [ 90%] Building CXX object CMakeFiles/_cmd.dir/layer3/MoleculeExporter.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML 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-fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/MoleculeExporter.cpp.o -MF CMakeFiles/_cmd.dir/layer3/MoleculeExporter.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/MoleculeExporter.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/MoleculeExporter.cpp [ 90%] Building CXX object CMakeFiles/_cmd.dir/layer3/MovieScene.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/MovieScene.cpp.o -MF CMakeFiles/_cmd.dir/layer3/MovieScene.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/MovieScene.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/MovieScene.cpp [ 91%] Building CXX object CMakeFiles/_cmd.dir/layer3/PlugIOManager.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/PlugIOManager.cpp.o -MF CMakeFiles/_cmd.dir/layer3/PlugIOManager.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/PlugIOManager.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/PlugIOManager.cpp [ 91%] Building CXX object CMakeFiles/_cmd.dir/layer3/RingFinder.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/RingFinder.cpp.o -MF CMakeFiles/_cmd.dir/layer3/RingFinder.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/RingFinder.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/RingFinder.cpp In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer1/Setting.h:27, from /build/reproducible-path/pymol-3.1.0+dfsg/layer1/PyMOLObject.h:25, from /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.h:27, from /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:38: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Result.h: In constructor ‘pymol::Result::Result(type) [with ResultT = std::pair]’: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Result.h:99:3: note: parameter passing for argument of type ‘std::pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 99 | Result(type r) : m_result(std::move(r)) {} | ^~~~~~ [ 91%] Building CXX object CMakeFiles/_cmd.dir/layer3/Seeker.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/Seeker.cpp.o -MF CMakeFiles/_cmd.dir/layer3/Seeker.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/Seeker.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Seeker.cpp [ 92%] Building CXX object CMakeFiles/_cmd.dir/layer3/Selector.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/Selector.cpp.o -MF CMakeFiles/_cmd.dir/layer3/Selector.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/Selector.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Selector.cpp [ 92%] Building CXX object CMakeFiles/_cmd.dir/layer3/SelectorTmp.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/SelectorTmp.cpp.o -MF CMakeFiles/_cmd.dir/layer3/SelectorTmp.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/SelectorTmp.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/SelectorTmp.cpp [ 93%] Building CXX object CMakeFiles/_cmd.dir/layer3/SpecRec.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/SpecRec.cpp.o -MF CMakeFiles/_cmd.dir/layer3/SpecRec.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/SpecRec.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/SpecRec.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer3/PlugIOManager.cpp: In function ‘pymol::CObject* PlugIOManagerLoad(PyMOLGlobals*, pymol::CObject**, const char*, int, int, const char*, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/PlugIOManager.cpp:941:65: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 200 [-Wformat-truncation=] 941 | " PlugIOManagerLoad: can't load trajectory into object '%s'\n", obj->Name ENDFB(G); | ^~ In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer3/PlugIOManager.cpp:28: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 58 and 313 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/PlugIOManager.cpp:940:7: note: in expansion of macro ‘PRINTFB’ 940 | PRINTFB(G, FB_ObjectMolecule, FB_Errors) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp: In function ‘void EditorPrepareDrag(PyMOLGlobals*, pymol::CObject*, int, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp:1935:29: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 236 [-Wformat-truncation=] 1935 | " Editor: grabbing (%s).", name ENDFB(G); | ^~ ~~~~ In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp:42: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 22 and 277 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp:1934:7: note: in expansion of macro ‘PRINTFB’ 1934 | PRINTFB(G, FB_Editor, FB_Blather) | ^~~~~~~ [ 93%] Building CXX object CMakeFiles/_cmd.dir/layer3/SpecRecSpecial.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer3/SpecRecSpecial.cpp.o -MF CMakeFiles/_cmd.dir/layer3/SpecRecSpecial.cpp.o.d -o CMakeFiles/_cmd.dir/layer3/SpecRecSpecial.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer3/SpecRecSpecial.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp: In function ‘void EditorDefineExtraPks(PyMOLGlobals*)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp:337:29: warning: ‘%s’ directive writing up to 255 bytes into a region of size 249 [-Wformat-overflow=] 337 | sprintf(buffer, "(byres %s)", name); | ^~ ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp:337:12: note: ‘sprintf’ output between 9 and 264 bytes into a destination of size 256 337 | sprintf(buffer, "(byres %s)", name); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp:339:31: warning: ‘%s’ directive writing up to 255 bytes into a region of size 247 [-Wformat-overflow=] 339 | sprintf(buffer, "(bychain %s)", name); | ^~ ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp:339:12: note: ‘sprintf’ output between 11 and 266 bytes into a destination of size 256 339 | sprintf(buffer, "(bychain %s)", name); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp:341:32: warning: ‘%s’ directive writing up to 255 bytes into a region of size 246 [-Wformat-overflow=] 341 | sprintf(buffer, "(byobject %s)", name); | ^~ ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Editor.cpp:341:12: note: ‘sprintf’ output between 12 and 267 bytes into a destination of size 256 341 | sprintf(buffer, "(byobject %s)", name); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 94%] Building CXX object CMakeFiles/_cmd.dir/layer4/Cmd.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer4/Cmd.cpp.o -MF CMakeFiles/_cmd.dir/layer4/Cmd.cpp.o.d -o CMakeFiles/_cmd.dir/layer4/Cmd.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer4/Cmd.cpp [ 94%] Building CXX object CMakeFiles/_cmd.dir/layer4/Menu.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer4/Menu.cpp.o -MF CMakeFiles/_cmd.dir/layer4/Menu.cpp.o.d -o CMakeFiles/_cmd.dir/layer4/Menu.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer4/Menu.cpp [ 94%] Building CXX object CMakeFiles/_cmd.dir/layer4/PopUp.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 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-I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/ov/src/ov_utility.cpp.o -MF CMakeFiles/_cmd.dir/ov/src/ov_utility.cpp.o.d -o CMakeFiles/_cmd.dir/ov/src/ov_utility.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/ov/src/ov_utility.cpp /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.13 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/ov/src/OVRandom.cpp.o -MF CMakeFiles/_cmd.dir/ov/src/OVRandom.cpp.o.d -o CMakeFiles/_cmd.dir/ov/src/OVRandom.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/ov/src/OVRandom.cpp /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘pymol::Result<> ExecutiveRemoveAtoms(PyMOLGlobals*, const char*, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:9120:58: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size between 207 and 217 [-Wformat-truncation=] 9120 | " Remove: eliminated %d atoms in model \"%s\".\n", | ^~ In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:94: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 42 and 307 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:9119:15: note: in expansion of macro ‘PRINTFB’ 9119 | PRINTFB(G, FB_Editor, FB_Actions) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘int ExecutiveSetBondSettingFromString(PyMOLGlobals*, int, const char*, const char*, const char*, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11551:28: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 11551 | " Setting: %s set for %d bonds in object \"%s\".\n", | ^~ 11552 | name, nSet, obj->Name ENDF(G); | ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11551:17: note: directive argument in the range [1, 2147483647] 11551 | " Setting: %s set for %d bonds in object \"%s\".\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output between 42 and 560 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11550:15: note: in expansion of macro ‘PRINTF’ 11550 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘PyObject* ExecutiveGetBondSetting(PyMOLGlobals*, int, char*, const char*, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11632:26: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 11632 | " Getting: %s for %d bonds in object \"%s\".\n", | ^~ 11633 | name, nSet, obj->Name ENDF(G); | ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11632:15: note: directive argument in the range [1, 2147483647] 11632 | " Getting: %s for %d bonds in object \"%s\".\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output between 38 and 556 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11631:13: note: in expansion of macro ‘PRINTF’ 11631 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘int ExecutiveSetBondSetting(PyMOLGlobals*, int, PyObject*, const char*, const char*, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11732:62: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size between 208 and 217 [-Wformat-truncation=] 11732 | " Setting: %s set for %d bonds in object \"%s\".\n", | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output 42 or more bytes (assuming 306) into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11731:17: note: in expansion of macro ‘PRINTF’ 11731 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘int ExecutiveUnsetBondSetting(PyMOLGlobals*, int, const char*, const char*, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11811:26: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 11811 | " Setting: %s unset for %d bonds in object \"%s\".\n", | ^~ 11812 | name, nSet, rec->obj->Name ENDF(G); | ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11811:15: note: directive argument in the range [1, 2147483647] 11811 | " Setting: %s unset for %d bonds in object \"%s\".\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output between 44 and 562 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11810:13: note: in expansion of macro ‘PRINTF’ 11810 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘int ExecutiveSetObjSettingFromString(PyMOLGlobals*, int, const char*, pymol::CObject*, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12353:30: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 12353 | " Setting: %s set to %s in object \"%s\", state %d.\n", | ^~ 12354 | name, value2, obj->Name, state + 1 ENDF(G); | ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12353:19: note: directive argument in the range [1, 2147483647] 12353 | " Setting: %s set to %s in object \"%s\", state %d.\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output between 43 and 1584 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12352:17: note: in expansion of macro ‘PRINTF’ 12352 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12345:30: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 12345 | " Setting: %s set to %s in object \"%s\".\n", | ^~ 12346 | name, value2, obj->Name ENDF(G); | ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output between 34 and 1566 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12344:17: note: in expansion of macro ‘PRINTF’ 12344 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12324:29: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 12324 | PRINTF " Setting: %s set to %s.\n", name, value2 ENDF(G); | ^~ ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output between 21 and 1298 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12324:11: note: in expansion of macro ‘PRINTF’ 12324 | PRINTF " Setting: %s set to %s.\n", name, value2 ENDF(G); | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘int ExecutiveSetSettingFromString(PyMOLGlobals*, int, const char*, const char*, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12256:36: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 12256 | " Setting: %s set for %d atoms in object \"%s\".\n", | ^~ 12257 | name, op.i4, rec->obj->Name ENDF(G); | ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output between 42 and 561 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12255:23: note: in expansion of macro ‘PRINTF’ 12255 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12224:32: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 12224 | " Setting: %s set to %s in %d objects, state %d.\n", | ^~ 12225 | name, value2, nObj, state + 1 ENDF(G); | ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12224:21: note: directive argument in the range [1, 2147483647] 12224 | " Setting: %s set to %s in %d objects, state %d.\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12224:21: note: directive argument in the range [1, 2147483647] /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output between 43 and 1338 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12223:19: note: in expansion of macro ‘PRINTF’ 12223 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12221:32: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 12221 | " Setting: %s set to %s in %d objects.\n", name, value2, nObj ENDF(G); | ^~ ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12221:21: note: directive argument in the range [1, 2147483647] 12221 | " Setting: %s set to %s in %d objects.\n", name, value2, nObj ENDF(G); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output between 34 and 1320 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12220:19: note: in expansion of macro ‘PRINTF’ 12220 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12288:36: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 12288 | " Setting: %s set to %s in object \"%s\", state %d.\n", | ^~ 12289 | name, value2, rec->obj->Name, state + 1 ENDF(G); | ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12288:25: note: directive argument in the range [1, 2147483647] 12288 | " Setting: %s set to %s in object \"%s\", state %d.\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output between 43 and 1584 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12287:23: note: in expansion of macro ‘PRINTF’ 12287 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12280:36: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 12280 | " Setting: %s set to %s in object \"%s\".\n", | ^~ 12281 | name, value2, rec->obj->Name ENDF(G); | ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output between 34 and 1566 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12279:23: note: in expansion of macro ‘PRINTF’ 12279 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12184:29: warning: ‘%s’ directive output may be truncated writing up to 254 bytes into a region of size 245 [-Wformat-truncation=] 12184 | PRINTF " Setting: %s set to %s.\n", name, value2 ENDF(G); | ^~ ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output between 21 and 1298 bytes into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12184:11: note: in expansion of macro ‘PRINTF’ 12184 | PRINTF " Setting: %s set to %s.\n", name, value2 ENDF(G); | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Selector.cpp: In function ‘int SelectorAssignSS(PyMOLGlobals*, int, int, int, int, ObjectMolecule*, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Selector.cpp:1717:70: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 207 [-Wformat-truncation=] 1717 | " AssignSS-Warning: Ignoring incomplete residue /%s/%s/%s/%d%c ...\n", | ^~ In file included from /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Selector.cpp:37: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 59 and 324 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Selector.cpp:1716:19: note: in expansion of macro ‘PRINTFB’ 1716 | PRINTFB(G, FB_Selector, FB_Warnings) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘bool ExecutiveSetSymmetry(PyMOLGlobals*, pymol::zstring_view, int, const CSymmetry&, bool)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5973:46: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 199 [-Wformat-truncation=] 5973 | " %s-Warning: Cannot set symmetry for '%s' (type %s)\n", __func__, | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 84 and 339 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5972:7: note: in expansion of macro ‘PRINTFB’ 5972 | PRINTFB(G, FB_Executive, FB_Warnings) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5982:43: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 202 [-Wformat-truncation=] 5982 | " %s-Details: Updated symmetry for '%s'\n", __func__, obj->Name ENDFB(G); | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 56 and 311 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5981:7: note: in expansion of macro ‘PRINTFB’ 5981 | PRINTFB(G, FB_Executive, FB_Details) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5973:46: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 199 [-Wformat-truncation=] 5973 | " %s-Warning: Cannot set symmetry for '%s' (type %s)\n", __func__, | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 84 and 339 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5972:7: note: in expansion of macro ‘PRINTFB’ 5972 | PRINTFB(G, FB_Executive, FB_Warnings) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘pymol::Result<> ExecutiveUnsetSetting(PyMOLGlobals*, int, pymol::zstring_view, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12465:68: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 215 [-Wformat-truncation=] 12465 | " Setting: %s unset for %d atoms in object \"%s\".\n", | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output 44 or more bytes (assuming 299) into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12464:21: note: in expansion of macro ‘PRINTF’ 12464 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12487:57: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 227 [-Wformat-truncation=] 12487 | " Setting: %s unset in object \"%s\", state %d.\n", | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12487:25: note: directive argument in the range [1, 2147483647] 12487 | " Setting: %s unset in object \"%s\", state %d.\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output 41 or more bytes (assuming 305) into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12486:23: note: in expansion of macro ‘PRINTF’ 12486 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12481:57: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 227 [-Wformat-truncation=] 12481 | " Setting: %s unset in object \"%s\".\n", | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output 32 or more bytes (assuming 287) into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12480:23: note: in expansion of macro ‘PRINTF’ 12480 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In member function ‘virtual int CExecutive::drag(int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:15625:55: warning: ‘%s’ directive writing up to 1023 bytes into a region of size 1013 [-Wformat-overflow=] 15625 | sprintf(I->ReorderLog, "cmd.order(\"%s\",location=\"%s\")\n", | ^~ 15626 | order_input, (location == -2) ? "upper" : "current"); | ~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:15625:26: note: ‘sprintf’ output between 32 and 1057 bytes into a destination of size 1024 15625 | sprintf(I->ReorderLog, "cmd.order(\"%s\",location=\"%s\")\n", | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 15626 | order_input, (location == -2) ? "upper" : "current"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘pymol::Result<> ExecutiveBond(PyMOLGlobals*, const char*, const char*, int, int, int, pymol::zstring_view)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:9484:67: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size between 200 and 210 [-Wformat-truncation=] 9484 | " Valence: %d bond valences adjusted in model \"%s\".\n", cnt, | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 49 and 314 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:9483:17: note: in expansion of macro ‘PRINTFB’ 9483 | PRINTFB(G, FB_Editor, FB_Actions) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:9496:59: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size between 208 and 218 [-Wformat-truncation=] 9496 | " Unbond: %d bonds removed from model \"%s\".\n", | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 41 and 306 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:9495:17: note: in expansion of macro ‘PRINTFB’ 9495 | PRINTFB(G, FB_Editor, FB_Actions) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:9471:53: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size between 214 and 224 [-Wformat-truncation=] 9471 | " Bond: %d bonds added to model \"%s\".\n", cnt, rec->obj->Name | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 35 and 300 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:9470:17: note: in expansion of macro ‘PRINTFB’ 9470 | PRINTFB(G, FB_Editor, FB_Actions) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘pymol::Result<> ExecutiveSetSetting(PyMOLGlobals*, int, PyObject*, pymol::zstring_view, int, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12004:70: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 217 [-Wformat-truncation=] 12004 | " Setting: %s set for %d atoms in object \"%s\".\n", | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output 42 or more bytes (assuming 297) into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12003:25: note: in expansion of macro ‘PRINTF’ 12003 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11915:42: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 237 [-Wformat-truncation=] 11915 | " Setting: %s set to %s in %d objects, state %d.\n", | ^~ 11916 | name, value, nObj, state + 1 ENDF(G); | ~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11915:21: note: directive argument in the range [1, 2147483647] 11915 | " Setting: %s set to %s in %d objects, state %d.\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11915:21: note: directive argument in the range [1, 2147483647] /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output 43 or more bytes (assuming 1084) into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11914:19: note: in expansion of macro ‘PRINTF’ 11914 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11912:42: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 237 [-Wformat-truncation=] 11912 | " Setting: %s set to %s in %d objects.\n", name, value, nObj ENDF(G); | ^~ ~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11912:21: note: directive argument in the range [1, 2147483647] 11912 | " Setting: %s set to %s in %d objects.\n", name, value, nObj ENDF(G); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output 34 or more bytes (assuming 1066) into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11911:19: note: in expansion of macro ‘PRINTF’ 11911 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12036:46: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 237 [-Wformat-truncation=] 12036 | " Setting: %s set to %s in object \"%s\", state %d.\n", | ^~ 12037 | name, value, rec->obj->Name, state + 1 ENDF(G); | ~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12036:25: note: directive argument in the range [1, 2147483647] 12036 | " Setting: %s set to %s in object \"%s\", state %d.\n", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output 43 or more bytes (assuming 1330) into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12035:23: note: in expansion of macro ‘PRINTF’ 12035 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12029:46: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 237 [-Wformat-truncation=] 12029 | " Setting: %s set to %s in object \"%s\".\n", | ^~ 12030 | name, value, rec->obj->Name ENDF(G); | ~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output 34 or more bytes (assuming 1312) into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:12028:23: note: in expansion of macro ‘PRINTF’ 12028 | PRINTF | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11871:39: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size 237 [-Wformat-truncation=] 11871 | PRINTF " Setting: %s set to %s.\n", name, value ENDF(G); | ^~ ~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:282:53: note: ‘snprintf’ output 21 or more bytes (assuming 1044) into a destination of size 255 282 | #define PRINTF { FeedbackLineType _FBstr; (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:11871:11: note: in expansion of macro ‘PRINTF’ 11871 | PRINTF " Setting: %s set to %s.\n", name, value ENDF(G); | ^~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘void ExecutiveManageObject(PyMOLGlobals*, pymol::CObject*, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:14601:37: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 229 [-Wformat-truncation=] 14601 | " Executive-Warning: name \"%s\" collides with a selection language keyword.\n", | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 73 and 328 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:14600:7: note: in expansion of macro ‘PRINTFB’ 14600 | PRINTFB(G, FB_Executive, FB_Warnings) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:14596:36: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 230 [-Wformat-truncation=] 14596 | " Executive: object name \"%s\" is illegal -- renamed to 'all_'.\n", obj->Name | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 61 and 316 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:14595:7: note: in expansion of macro ‘PRINTFB’ 14595 | PRINTFB(G, FB_Executive, FB_Warnings) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:14627:11: warning: ‘char* strcpy(char*, const char*)’ writing between 1 and 256 bytes into a region of size 0 overflows the destination [-Wstringop-overflow=] 14627 | strcpy(rec->name, obj->Name); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~ cc1plus: note: destination object is likely at address zero /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘int ExecutiveGroup(PyMOLGlobals*, pymol::zstring_view, pymol::zstring_view, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:2275:40: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 235 [-Wformat-truncation=] 2275 | " Executive: adding '%s' to group '%s'.\n", rec.name, rec.group_name | ^~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 36 and 546 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:2274:17: note: in expansion of macro ‘PRINTFB’ 2274 | PRINTFB(G, FB_Executive, FB_Actions) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘pymol::Result > ExecutiveSetName(PyMOLGlobals*, pymol::zstring_view, pymol::zstring_view, bool)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:3535:41: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 222 [-Wformat-truncation=] 3535 | " Warning: Invalid characters in '%s' have been replaced or stripped\n", | ^~ 3536 | name ENDFB(G); | ~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 67 and 322 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:3534:5: note: in expansion of macro ‘PRINTFB’ 3534 | PRINTFB(G, FB_Executive, FB_Warnings) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘int ExecutiveSetSession(PyMOLGlobals*, PyObject*, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5097:57: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 213 [-Wformat-truncation=] 5097 | " Executive: skipping unrecognized object \"%s\" of type %d.\n", | ^~ In function ‘int ExecutiveSetNamedEntries(PyMOLGlobals*, PyObject*, int, int, int)’, inlined from ‘int ExecutiveSetSession(PyMOLGlobals*, PyObject*, int, int)’ at /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5727:38: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 56 and 321 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5096:11: note: in expansion of macro ‘PRINTFB’ 5096 | PRINTFB(G, FB_Executive, FB_Errors) | ^~~~~~~ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp: In function ‘int ExecutiveSetSession(PyMOLGlobals*, PyObject*, int, int)’: /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5122:58: warning: ‘%s’ directive output may be truncated writing up to 255 bytes into a region of size 210 [-Wformat-truncation=] 5122 | "ExectiveSetNamedEntries-Error: after object \"%s\".\n", rec->name ENDFB(G); | ^~ In function ‘int ExecutiveSetNamedEntries(PyMOLGlobals*, PyObject*, int, int, int)’, inlined from ‘int ExecutiveSetSession(PyMOLGlobals*, PyObject*, int, int)’ at /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5727:38: /build/reproducible-path/pymol-3.1.0+dfsg/layer0/Feedback.h:274:15: note: ‘snprintf’ output between 49 and 304 bytes into a destination of size 255 274 | (snprintf)( _FBstr, FEEDBACK_MAX_OUTPUT, | ^ /build/reproducible-path/pymol-3.1.0+dfsg/layer3/Executive.cpp:5121:9: note: in expansion of macro ‘PRINTFB’ 5121 | PRINTFB(G, FB_Executive, FB_Errors) | ^~~~~~~ [100%] Linking CXX shared library 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CMakeFiles/_cmd.dir/ov/src/OVContext.cpp.o CMakeFiles/_cmd.dir/ov/src/OVHeap.cpp.o CMakeFiles/_cmd.dir/ov/src/OVHeapArray.cpp.o CMakeFiles/_cmd.dir/ov/src/OVLexicon.cpp.o CMakeFiles/_cmd.dir/ov/src/OVOneToAny.cpp.o CMakeFiles/_cmd.dir/ov/src/OVOneToOne.cpp.o CMakeFiles/_cmd.dir/ov/src/OVRandom.cpp.o CMakeFiles/_cmd.dir/ov/src/ov_utility.cpp.o -lpng -lfreetype -lxml2 -lGL -lGLEW -lnetcdf -fopenmp gmake[3]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd' [100%] Built target _cmd gmake[2]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd/CMakeFiles 0 gmake[1]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd' cmake /build/reproducible-path/pymol-3.1.0+dfsg -DTARGET_NAME=_champ 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while(count&&(((int)p)&mask)) { | ^ [100%] Linking C shared library /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/champ/_champ.cpython-313-aarch64-linux-gnu.so /usr/bin/cmake -E cmake_link_script CMakeFiles/_champ.dir/link.txt --verbose=1 /usr/bin/cc -fPIC -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -shared -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/_champ.dir/link.d -Wl,-soname,_champ.cpython-313-aarch64-linux-gnu.so -o /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/champ/_champ.cpython-313-aarch64-linux-gnu.so CMakeFiles/_champ.dir/contrib/champ/champ.c.o CMakeFiles/_champ.dir/contrib/champ/champ_module.c.o CMakeFiles/_champ.dir/contrib/champ/chiral.c.o CMakeFiles/_champ.dir/contrib/champ/err2.c.o CMakeFiles/_champ.dir/contrib/champ/feedback2.c.o CMakeFiles/_champ.dir/contrib/champ/list.c.o CMakeFiles/_champ.dir/contrib/champ/os_memory.c.o CMakeFiles/_champ.dir/contrib/champ/sort.c.o CMakeFiles/_champ.dir/contrib/champ/strblock.c.o CMakeFiles/_champ.dir/contrib/champ/vla.c.o gmake[3]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_champ' [100%] Built target _champ gmake[2]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_champ' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_champ/CMakeFiles 0 gmake[1]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_champ' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg' echo "FIXME: Test ends up with: AttributeError: module 'pymol' has no attribute 'start_pymol'" FIXME: Test ends up with: AttributeError: module 'pymol' has no attribute 'start_pymol' echo "Unfortunately upstream has removed the script that was used for testing from upstream source" Unfortunately upstream has removed the script that was used for testing from upstream source make[1]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg' create-stamp debian/debhelper-build-stamp dh_testroot -a -O--buildsystem=pybuild dh_prep -a -O--buildsystem=pybuild dh_auto_install -a -O--buildsystem=pybuild I: pybuild base:385: /usr/bin/python3.14 setup.py install --root /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol /usr/lib/python3/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated !! ******************************************************************************** Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). This deprecation is overdue, please update your project and remove deprecated calls to avoid build errors in the future. See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! corresp(dist, value, root_dir) running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running build running build_py running egg_info writing modules/pymol.egg-info/PKG-INFO /usr/lib/python3/dist-packages/setuptools/_core_metadata.py:163: SetuptoolsDeprecationWarning: Invalid config. !! ******************************************************************************** newlines are not allowed in `summary` and will break in the future ******************************************************************************** !! write_field('Summary', single_line(summary)) writing dependency_links to modules/pymol.egg-info/dependency_links.txt writing entry points to modules/pymol.egg-info/entry_points.txt writing requirements to modules/pymol.egg-info/requires.txt writing top-level names to modules/pymol.egg-info/top_level.txt reading manifest file 'modules/pymol.egg-info/SOURCES.txt' adding license file 'LICENSE' adding license file 'AUTHORS' writing manifest file 'modules/pymol.egg-info/SOURCES.txt' running build_ext cmake /build/reproducible-path/pymol-3.1.0+dfsg -DTARGET_NAME=_cmd -DCMAKE_LIBRARY_OUTPUT_DIRECTORY=/build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol -DCMAKE_BUILD_TYPE=Release -DALL_INC_DIR=include;contrib/uiuc/plugins/include;ov/src;layer0;layer1;layer2;layer3;layer4;layer5;build/generated;contrib/uiuc/plugins/molfile_plugin/src;/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include;/usr/include;/usr/include/freetype2;/usr/include/libxml2;/usr/include/python3.14;/usr/include/python3.14; -DALL_SRC=build/generated/ShaderText.cpp;contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c;contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c;contrib/uiuc/plugins/molfile_plugin/src/avsplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.c;contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c;contrib/uiuc/plugins/molfile_plugin/src/biomoccaplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/carplugin.c;contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/corplugin.c;contrib/uiuc/plugins/molfile_plugin/src/crdplugin.c;contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c;contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c;contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/dxplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c;contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/grdplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/hash.c;contrib/uiuc/plugins/molfile_plugin/src/inthash.c;contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c;contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/mapplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c;contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c;contrib/uiuc/plugins/molfile_plugin/src/netcdfplugin.c;contrib/uiuc/plugins/molfile_plugin/src/offplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c;contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c;contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c;contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c;contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c;contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c;layer0/Bezier.cpp;layer0/Block.cpp;layer0/CarveHelper.cpp;layer0/ContourSurf.cpp;layer0/Crystal.cpp;layer0/Err.cpp;layer0/Feedback.cpp;layer0/Field.cpp;layer0/File.cpp;layer0/GFXManager.cpp;layer0/GenericBuffer.cpp;layer0/GraphicsUtil.cpp;layer0/Isosurf.cpp;layer0/Map.cpp;layer0/Match.cpp;layer0/Matrix.cpp;layer0/MemoryDebug.cpp;layer0/MemoryUsage.cpp;layer0/MyPNG.cpp;layer0/Parse.cpp;layer0/Pixmap.cpp;layer0/PostProcess.cpp;layer0/PrintUtils.cpp;layer0/ShaderMgr.cpp;layer0/ShaderPreprocessor.cpp;layer0/ShaderPrg.cpp;layer0/Sphere.cpp;layer0/TTT.cpp;layer0/Tetsurf.cpp;layer0/Texture.cpp;layer0/Tracker.cpp;layer0/Triangle.cpp;layer0/Util.cpp;layer0/Util2.cpp;layer0/Vector.cpp;layer0/Word.cpp;layer0/ccealignmodule.cpp;layer0/marching_cubes.cpp;layer0/os_gl.cpp;layer1/Basis.cpp;layer1/ButMode.cpp;layer1/CGO.cpp;layer1/CGOGL.cpp;layer1/CGORenderer.cpp;layer1/COLLADA.cpp;layer1/Camera.cpp;layer1/Character.cpp;layer1/Color.cpp;layer1/Control.cpp;layer1/Extrude.cpp;layer1/Font.cpp;layer1/FontGLUT.cpp;layer1/FontGLUT8x13.cpp;layer1/FontGLUT9x15.cpp;layer1/FontGLUTHel10.cpp;layer1/FontGLUTHel12.cpp;layer1/FontGLUTHel18.cpp;layer1/FontType.cpp;layer1/ImageUtils.cpp;layer1/Movie.cpp;layer1/Ortho.cpp;layer1/P.cpp;layer1/PConv.cpp;layer1/Picking.cpp;layer1/Pop.cpp;layer1/P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-DALL_DEF=_PYMOL_LIBPNG;_PYMOL_FREETYPE;PYMOL_OPENMP;_PYMOL_VMD_PLUGINS;_HAVE_LIBXML;_PYMOL_NO_MSGPACKC;_PYMOL_NO_MAIN;_PYMOL_NUMPY; -DALL_LIB_DIR=/usr/lib; -DALL_LIB=png;freetype;xml2;GL;GLEW;netcdf; -DALL_COMP_ARGS=-Werror=return-type;-Wunused-variable;-Wno-switch;-Wno-narrowing;-Wno-char-subscripts;-O3;-fopenmp; -DALL_EXT_LINK=-fopenmp -DSHARED_SUFFIX=.cpython-314-aarch64-linux-gnu.so -- Configuring done (0.0s) -- Generating done (0.0s) -- Build files have been written to: /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd cmake --build . --config Release -j12 gmake[1]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd' /usr/bin/cmake -S/build/reproducible-path/pymol-3.1.0+dfsg -B/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd/CMakeFiles /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[2]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd' /usr/bin/gmake -f CMakeFiles/_cmd.dir/build.make CMakeFiles/_cmd.dir/depend gmake[3]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd' cd /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/pymol-3.1.0+dfsg /build/reproducible-path/pymol-3.1.0+dfsg /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd/CMakeFiles/_cmd.dir/DependInfo.cmake "--color=" _cmd gmake[3]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd' /usr/bin/gmake -f CMakeFiles/_cmd.dir/build.make CMakeFiles/_cmd.dir/build gmake[3]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd' [ 1%] Building CXX object CMakeFiles/_cmd.dir/layer4/Cmd.cpp.o /usr/bin/c++ -DPYMOL_OPENMP -D_HAVE_LIBXML -D_PYMOL_FREETYPE -D_PYMOL_LIBPNG -D_PYMOL_NO_MAIN -D_PYMOL_NO_MSGPACKC -D_PYMOL_NUMPY -D_PYMOL_VMD_PLUGINS -D_cmd_EXPORTS -I/build/reproducible-path/pymol-3.1.0+dfsg/include -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/include -I/build/reproducible-path/pymol-3.1.0+dfsg/ov/src -I/build/reproducible-path/pymol-3.1.0+dfsg/layer0 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer1 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer2 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer3 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer4 -I/build/reproducible-path/pymol-3.1.0+dfsg/layer5 -I/build/reproducible-path/pymol-3.1.0+dfsg/build/generated -I/build/reproducible-path/pymol-3.1.0+dfsg/contrib/uiuc/plugins/molfile_plugin/src -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/freetype2 -I/usr/include/libxml2 -I/usr/include/python3.14 -g -O2 -ffile-prefix-map=/build/reproducible-path/pymol-3.1.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -DNDEBUG -fPIC -Werror=return-type -Wunused-variable -Wno-switch -Wno-narrowing -Wno-char-subscripts -O3 -fopenmp -MD -MT CMakeFiles/_cmd.dir/layer4/Cmd.cpp.o -MF CMakeFiles/_cmd.dir/layer4/Cmd.cpp.o.d -o CMakeFiles/_cmd.dir/layer4/Cmd.cpp.o -c /build/reproducible-path/pymol-3.1.0+dfsg/layer4/Cmd.cpp [ 2%] Linking CXX shared library 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CMakeFiles/_cmd.dir/ov/src/OVContext.cpp.o CMakeFiles/_cmd.dir/ov/src/OVHeap.cpp.o CMakeFiles/_cmd.dir/ov/src/OVHeapArray.cpp.o CMakeFiles/_cmd.dir/ov/src/OVLexicon.cpp.o CMakeFiles/_cmd.dir/ov/src/OVOneToAny.cpp.o CMakeFiles/_cmd.dir/ov/src/OVOneToOne.cpp.o CMakeFiles/_cmd.dir/ov/src/OVRandom.cpp.o CMakeFiles/_cmd.dir/ov/src/ov_utility.cpp.o -lpng -lfreetype -lxml2 -lGL -lGLEW -lnetcdf -fopenmp gmake[3]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd' [100%] Built target _cmd gmake[2]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd/CMakeFiles 0 gmake[1]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-314/_cmd' cmake /build/reproducible-path/pymol-3.1.0+dfsg -DTARGET_NAME=_champ 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/build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard/dragging.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard/nucmutagenesis.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard/charge.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard/distance.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard/command.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard/toggle.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard/message.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard/label.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard/cleanup.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard/density.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard/pair_fit.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard/benchmark.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard/box.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard/annotation.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard/renaming.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard/measurement.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard/mutagenesis.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard/pseudoatom.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard/appearance.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard/openvr.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard/stereodemo.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard/demo.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizard/security.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/morphing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/computing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/seqalign.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/keyboard.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/shortcut.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/util.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/xwin.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/wizarding.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/diagnosing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/helping.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/povray.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/controlling.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/fitting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/_cmd.cpython-314-aarch64-linux-gnu.so -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/preset.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/checking.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/querying.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/callback.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/parsing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/moving.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/editor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/shortcut_dict.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/internal.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/selector.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/viewing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/save_shortcut.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/completing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/selecting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/keywords.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/cgo.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/headering.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/movie.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/colorramping.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/cmd.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/plugins copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/plugins/repository.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/plugins copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/plugins/installation.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/plugins copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/plugins/legacysupport.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/plugins copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/plugins/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/plugins copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/plugins/managergui_qt.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/plugins copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/plugins/managergui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/plugins copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/invocation.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/colorprinting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/api.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/menu.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/editing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/rpc.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/cgobuilder.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/experimenting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/parser.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/mpeg_encode.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/Qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/Qt/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/Qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/Qt/utils.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/Qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/__main__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/creating.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/setting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/shortcut_manager.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/_gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/locking.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/exporting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/constants.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/xray.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/externing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/lazyio.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/monitoring.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/pymolhttpd.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/feedingback.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/constants_palette.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/importing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/commanding.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/stereochemistry copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/stereochemistry/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/stereochemistry copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol/vfont.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol2 copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol2/cmd2.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol2 copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pymol2/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol2 creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms/render.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms/save_object.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms/create_shortcut.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms/change_confirm.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms/load_aln.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms/load_traj.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms/png.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms/load_map.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms/shortcut_menu.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms/colors.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms/pluginitem.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms/props.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms/askpartial.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms/fetch.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms/load_mae.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms/load_mtz.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms/save_molecule.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms/pluginmanager.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms/movieexport.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/forms/help_shortcut.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/file_dialogs.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/shortcut_menu_gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/advanced_settings_gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/scene_bin_gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/pymol_gl_widget.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/volume.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/properties_dialog.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/builder.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/mimic_pmg_tk.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/mimic_tk.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/syntax copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/syntax/pmlparser.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/syntax copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/syntax/python.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/syntax copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/syntax/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/syntax copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/syntax/pml.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/syntax copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/keymapping.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/TextEditor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_qt/pymol_qt_gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/web creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/web/examples copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/web/examples/justhttpd.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/web/examples copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/web/examples/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/web/examples creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk/skins creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk/skins/normal copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk/skins/normal/ModalWindow.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk/skins/normal copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk/skins/normal/builder.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk/skins/normal copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk/skins/normal/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk/skins/normal copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk/skins/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk/skins creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk/skins/demo copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk/skins/demo/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk/skins/demo copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk/SetEditor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk/PMGApp.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk/volume.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk/PyMOLMapLoad.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk/startup copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk/startup/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk/startup copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk/ColorEditor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk/TextEditor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk/Setting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/pmg_tk/Demo.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/place.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/bond_mmff.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/protein_residues.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/charge.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/mae.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/protein_amber99.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/water_residues.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/xyz.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/fast copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/fast/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/fast copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/arc.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/pkl.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/gms.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/io.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/dictdb.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/lst.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/cif.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/mass.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/protein_amber.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/sdf.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/models.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/map.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/cc1.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/gamess1.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/bonds.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/water_amber.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/pdb.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/bmin copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/bmin/util.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/bmin copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/bmin/state.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/bmin copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/bmin/realtime.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/bmin copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/bmin/commands.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/bmin copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/bmin/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/bmin copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/cpv.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/mol2.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/mol.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/brick.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/hetatm.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/bond_amber.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/tinker copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/tinker/amber.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/tinker copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/tinker/state.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/tinker copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/tinker/realtime.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/tinker copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/tinker/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/tinker copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/tinker/keyword.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/tinker copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/solvate.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/neighbor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/mmd.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/mmtf copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/mmtf/io.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/mmtf copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/mmtf/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/mmtf creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/champ copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/champ/assign.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/champ copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/champ/amber99.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/champ copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/champ/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/champ copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/champ/formal_charges.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/champ copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/champ/_champ.cpython-314-aarch64-linux-gnu.so -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/champ copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/protein.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/fragments copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/fragments/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/fragments copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.14_pymol/build/chempy/protein_mmff.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard/sculpting.py to sculpting.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard/filter.py to filter.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard/dragging.py to dragging.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard/nucmutagenesis.py to nucmutagenesis.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard/charge.py to charge.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard/distance.py to distance.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard/command.py to command.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard/toggle.py to toggle.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard/message.py to message.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard/label.py to label.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard/cleanup.py to cleanup.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard/density.py to density.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard/pair_fit.py to pair_fit.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard/benchmark.py to benchmark.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard/box.py to box.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard/annotation.py to annotation.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard/__init__.py to __init__.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard/renaming.py to renaming.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard/measurement.py to measurement.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard/mutagenesis.py to mutagenesis.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard/pseudoatom.py to pseudoatom.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard/appearance.py to appearance.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard/openvr.py to openvr.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard/stereodemo.py to stereodemo.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard/demo.py to demo.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizard/security.py to security.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/morphing.py to morphing.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/computing.py to computing.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/seqalign.py to seqalign.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/keyboard.py to keyboard.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/shortcut.py to shortcut.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/util.py to util.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/xwin.py to xwin.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/wizarding.py to wizarding.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/diagnosing.py to diagnosing.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/helping.py to helping.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/povray.py to povray.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/controlling.py to controlling.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/fitting.py to fitting.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/preset.py to preset.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/checking.py to checking.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/querying.py to querying.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/callback.py to callback.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/parsing.py to parsing.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/moving.py to moving.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/editor.py to editor.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/shortcut_dict.py to shortcut_dict.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/internal.py to internal.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/selector.py to selector.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/viewing.py to viewing.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/save_shortcut.py to save_shortcut.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/completing.py to completing.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/selecting.py to selecting.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/keywords.py to keywords.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/cgo.py to cgo.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/headering.py to headering.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/movie.py to movie.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/colorramping.py to colorramping.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/__init__.py to __init__.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/gui.py to gui.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/cmd.py to cmd.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/plugins/repository.py to repository.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/plugins/installation.py to installation.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/plugins/legacysupport.py to legacysupport.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/plugins/__init__.py to __init__.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/plugins/managergui_qt.py to managergui_qt.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/plugins/managergui.py to managergui.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/invocation.py to invocation.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/colorprinting.py to colorprinting.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/api.py to api.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/menu.py to menu.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/editing.py to editing.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/rpc.py to rpc.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/cgobuilder.py to cgobuilder.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/experimenting.py to experimenting.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/parser.py to parser.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/mpeg_encode.py to mpeg_encode.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/Qt/__init__.py to __init__.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/Qt/utils.py to utils.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/__main__.py to __main__.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/creating.py to creating.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/setting.py to setting.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/shortcut_manager.py to shortcut_manager.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/_gui.py to _gui.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/locking.py to locking.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/exporting.py to exporting.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/constants.py to constants.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/xray.py to xray.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/externing.py to externing.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/lazyio.py to lazyio.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/monitoring.py to monitoring.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/pymolhttpd.py to pymolhttpd.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/feedingback.py to feedingback.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/constants_palette.py to constants_palette.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/importing.py to importing.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/commanding.py to commanding.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/stereochemistry/__init__.py to __init__.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol/vfont.py to vfont.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol2/cmd2.py to cmd2.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol2/__init__.py to __init__.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/forms/__init__.py to __init__.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/file_dialogs.py to file_dialogs.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/shortcut_menu_gui.py to shortcut_menu_gui.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/advanced_settings_gui.py to advanced_settings_gui.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/scene_bin_gui.py to scene_bin_gui.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/pymol_gl_widget.py to pymol_gl_widget.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/volume.py to volume.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/properties_dialog.py to properties_dialog.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/builder.py to builder.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/__init__.py to __init__.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/mimic_pmg_tk.py to mimic_pmg_tk.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/mimic_tk.py to mimic_tk.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/syntax/pmlparser.py to pmlparser.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/syntax/python.py to python.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/syntax/__init__.py to __init__.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/syntax/pml.py to pml.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/keymapping.py to keymapping.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/TextEditor.py to TextEditor.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_qt/pymol_qt_gui.py to pymol_qt_gui.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/web/examples/justhttpd.py to justhttpd.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/web/examples/__init__.py to __init__.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk/skins/normal/ModalWindow.py to ModalWindow.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk/skins/normal/builder.py to builder.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk/skins/normal/__init__.py to __init__.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk/skins/__init__.py to __init__.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk/skins/demo/__init__.py to __init__.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk/SetEditor.py to SetEditor.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk/PMGApp.py to PMGApp.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk/volume.py to volume.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk/PyMOLMapLoad.py to PyMOLMapLoad.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk/__init__.py to __init__.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk/startup/__init__.py to __init__.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk/ColorEditor.py to ColorEditor.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk/TextEditor.py to TextEditor.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk/Setting.py to Setting.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pmg_tk/Demo.py to Demo.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/place.py to place.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/bond_mmff.py to bond_mmff.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/protein_residues.py to protein_residues.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/charge.py to charge.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/mae.py to mae.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/protein_amber99.py to protein_amber99.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/water_residues.py to water_residues.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/xyz.py to xyz.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/fast/__init__.py to __init__.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/arc.py to arc.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/pkl.py to pkl.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/gms.py to gms.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/io.py to io.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/dictdb.py to dictdb.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/lst.py to lst.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/cif.py to cif.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/mass.py to mass.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/protein_amber.py to protein_amber.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/sdf.py to sdf.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/models.py to models.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/map.py to map.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/cc1.py to cc1.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/gamess1.py to gamess1.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/bonds.py to bonds.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/__init__.py to __init__.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/water_amber.py to water_amber.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/pdb.py to pdb.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/bmin/util.py to util.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/bmin/state.py to state.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/bmin/realtime.py to realtime.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/bmin/commands.py to commands.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/bmin/__init__.py to __init__.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/cpv.py to cpv.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/mol2.py to mol2.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/mol.py to mol.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/brick.py to brick.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/hetatm.py to hetatm.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/bond_amber.py to bond_amber.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/tinker/amber.py to amber.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/tinker/state.py to state.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/tinker/realtime.py to realtime.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/tinker/__init__.py to __init__.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/tinker/keyword.py to keyword.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/solvate.py to solvate.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/neighbor.py to neighbor.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/mmd.py to mmd.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/mmtf/io.py to io.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/mmtf/__init__.py to __init__.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/champ/assign.py to assign.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/champ/amber99.py to amber99.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/champ/__init__.py to __init__.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/champ/formal_charges.py to formal_charges.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/protein.py to protein.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/fragments/__init__.py to __init__.cpython-314.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/chempy/protein_mmff.py to protein_mmff.cpython-314.pyc running install_egg_info Copying modules/pymol.egg-info to /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.14/dist-packages/pymol-3.1.0.egg-info Skipping SOURCES.txt running install_scripts Installing pymol script to /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/bin I: pybuild base:385: /usr/bin/python3 setup.py install --root /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol /usr/lib/python3/dist-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated !! ******************************************************************************** Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). This deprecation is overdue, please update your project and remove deprecated calls to avoid build errors in the future. See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! corresp(dist, value, root_dir) running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running build running build_py running egg_info writing modules/pymol.egg-info/PKG-INFO /usr/lib/python3/dist-packages/setuptools/_core_metadata.py:163: SetuptoolsDeprecationWarning: Invalid config. !! ******************************************************************************** newlines are not allowed in `summary` and will break in the future ******************************************************************************** !! write_field('Summary', single_line(summary)) writing dependency_links to modules/pymol.egg-info/dependency_links.txt writing entry points to modules/pymol.egg-info/entry_points.txt writing requirements to modules/pymol.egg-info/requires.txt writing top-level names to modules/pymol.egg-info/top_level.txt reading manifest file 'modules/pymol.egg-info/SOURCES.txt' adding license file 'LICENSE' adding license file 'AUTHORS' writing manifest file 'modules/pymol.egg-info/SOURCES.txt' running build_ext cmake /build/reproducible-path/pymol-3.1.0+dfsg -DTARGET_NAME=_cmd -DCMAKE_LIBRARY_OUTPUT_DIRECTORY=/build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol -DCMAKE_BUILD_TYPE=Release -DALL_INC_DIR=include;contrib/uiuc/plugins/include;ov/src;layer0;layer1;layer2;layer3;layer4;layer5;build/generated;contrib/uiuc/plugins/molfile_plugin/src;/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include;/usr/include;/usr/include/freetype2;/usr/include/libxml2;/usr/include/python3.13;/usr/include/python3.13; -DALL_SRC=build/generated/ShaderText.cpp;contrib/uiuc/plugins/molfile_plugin/src/PlugIOManagerInit.c;contrib/uiuc/plugins/molfile_plugin/src/abinitplugin.c;contrib/uiuc/plugins/molfile_plugin/src/avsplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/basissetplugin.c;contrib/uiuc/plugins/molfile_plugin/src/bgfplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/binposplugin.c;contrib/uiuc/plugins/molfile_plugin/src/biomoccaplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/brixplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/carplugin.c;contrib/uiuc/plugins/molfile_plugin/src/ccp4plugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/corplugin.c;contrib/uiuc/plugins/molfile_plugin/src/crdplugin.c;contrib/uiuc/plugins/molfile_plugin/src/cubeplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/dcdplugin.c;contrib/uiuc/plugins/molfile_plugin/src/dlpolyplugin.c;contrib/uiuc/plugins/molfile_plugin/src/dsn6plugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/dtrplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/dxplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/edmplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/fs4plugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/gamessplugin.c;contrib/uiuc/plugins/molfile_plugin/src/graspplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/grdplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/gridplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/gromacsplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/hash.c;contrib/uiuc/plugins/molfile_plugin/src/inthash.c;contrib/uiuc/plugins/molfile_plugin/src/jsplugin.c;contrib/uiuc/plugins/molfile_plugin/src/maeffplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/mapplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/mdfplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/mol2plugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/moldenplugin.c;contrib/uiuc/plugins/molfile_plugin/src/molemeshplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/msmsplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/namdbinplugin.c;contrib/uiuc/plugins/molfile_plugin/src/netcdfplugin.c;contrib/uiuc/plugins/molfile_plugin/src/offplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/parm7plugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/parmplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/pbeqplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/pdbplugin.c;contrib/uiuc/plugins/molfile_plugin/src/pdbxplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/phiplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/pltplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/plyplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/pqrplugin.c;contrib/uiuc/plugins/molfile_plugin/src/psfplugin.c;contrib/uiuc/plugins/molfile_plugin/src/raster3dplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/rst7plugin.c;contrib/uiuc/plugins/molfile_plugin/src/situsplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/spiderplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/stlplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/tinkerplugin.c;contrib/uiuc/plugins/molfile_plugin/src/uhbdplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/vasp5xdatcarplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspchgcarplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspoutcarplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspparchgplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspposcarplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspxdatcarplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vaspxmlplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vtfplugin.c;contrib/uiuc/plugins/molfile_plugin/src/vtkplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/xbgfplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/xsfplugin.cpp;contrib/uiuc/plugins/molfile_plugin/src/xyzplugin.c;layer0/Bezier.cpp;layer0/Block.cpp;layer0/CarveHelper.cpp;layer0/ContourSurf.cpp;layer0/Crystal.cpp;layer0/Err.cpp;layer0/Feedback.cpp;layer0/Field.cpp;layer0/File.cpp;layer0/GFXManager.cpp;layer0/GenericBuffer.cpp;layer0/GraphicsUtil.cpp;layer0/Isosurf.cpp;layer0/Map.cpp;layer0/Match.cpp;layer0/Matrix.cpp;layer0/MemoryDebug.cpp;layer0/MemoryUsage.cpp;layer0/MyPNG.cpp;layer0/Parse.cpp;layer0/Pixmap.cpp;layer0/PostProcess.cpp;layer0/PrintUtils.cpp;layer0/ShaderMgr.cpp;layer0/ShaderPreprocessor.cpp;layer0/ShaderPrg.cpp;layer0/Sphere.cpp;layer0/TTT.cpp;layer0/Tetsurf.cpp;layer0/Texture.cpp;layer0/Tracker.cpp;layer0/Triangle.cpp;layer0/Util.cpp;layer0/Util2.cpp;layer0/Vector.cpp;layer0/Word.cpp;layer0/ccealignmodule.cpp;layer0/marching_cubes.cpp;layer0/os_gl.cpp;layer1/Basis.cpp;layer1/ButMode.cpp;layer1/CGO.cpp;layer1/CGOGL.cpp;layer1/CGORenderer.cpp;layer1/COLLADA.cpp;layer1/Camera.cpp;layer1/Character.cpp;layer1/Color.cpp;layer1/Control.cpp;layer1/Extrude.cpp;layer1/Font.cpp;layer1/FontGLUT.cpp;layer1/FontGLUT8x13.cpp;layer1/FontGLUT9x15.cpp;layer1/FontGLUTHel10.cpp;layer1/FontGLUTHel12.cpp;layer1/FontGLUTHel18.cpp;layer1/FontType.cpp;layer1/ImageUtils.cpp;layer1/Movie.cpp;layer1/Ortho.cpp;layer1/P.cpp;layer1/PConv.cpp;layer1/Picking.cpp;layer1/Pop.cpp;layer1/P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-DALL_DEF=_PYMOL_LIBPNG;_PYMOL_FREETYPE;PYMOL_OPENMP;_PYMOL_VMD_PLUGINS;_HAVE_LIBXML;_PYMOL_NO_MSGPACKC;_PYMOL_NO_MAIN;_PYMOL_NUMPY; -DALL_LIB_DIR=/usr/lib; -DALL_LIB=png;freetype;xml2;GL;GLEW;netcdf; -DALL_COMP_ARGS=-Werror=return-type;-Wunused-variable;-Wno-switch;-Wno-narrowing;-Wno-char-subscripts;-O3;-fopenmp; -DALL_EXT_LINK=-fopenmp -DSHARED_SUFFIX=.cpython-313-aarch64-linux-gnu.so -- Configuring done (0.0s) -- Generating done (0.1s) -- Build files have been written to: /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd cmake --build . --config Release -j12 gmake[1]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd' /usr/bin/cmake -S/build/reproducible-path/pymol-3.1.0+dfsg -B/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start 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CMakeFiles/_cmd.dir/ov/src/OVContext.cpp.o CMakeFiles/_cmd.dir/ov/src/OVHeap.cpp.o CMakeFiles/_cmd.dir/ov/src/OVHeapArray.cpp.o CMakeFiles/_cmd.dir/ov/src/OVLexicon.cpp.o CMakeFiles/_cmd.dir/ov/src/OVOneToAny.cpp.o CMakeFiles/_cmd.dir/ov/src/OVOneToOne.cpp.o CMakeFiles/_cmd.dir/ov/src/OVRandom.cpp.o CMakeFiles/_cmd.dir/ov/src/ov_utility.cpp.o -lpng -lfreetype -lxml2 -lGL -lGLEW -lnetcdf -fopenmp gmake[3]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd' [100%] Built target _cmd gmake[2]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd/CMakeFiles 0 gmake[1]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg/build/temp.linux-aarch64-cpython-313/_cmd' cmake /build/reproducible-path/pymol-3.1.0+dfsg -DTARGET_NAME=_champ 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/build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/dragging.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/nucmutagenesis.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/charge.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/distance.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard 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/build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/density.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/pair_fit.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/benchmark.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/box.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/annotation.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/renaming.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/measurement.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/mutagenesis.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/pseudoatom.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/appearance.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/openvr.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/stereodemo.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/demo.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizard/security.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/morphing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/computing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/seqalign.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/keyboard.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/shortcut.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/util.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/xwin.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/wizarding.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/diagnosing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/helping.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/povray.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/controlling.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/fitting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/preset.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/checking.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/querying.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/callback.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/parsing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/moving.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/editor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/shortcut_dict.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/internal.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/selector.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/viewing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/save_shortcut.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/completing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/selecting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/keywords.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/cgo.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/headering.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/movie.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/colorramping.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/cmd.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/plugins copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/plugins/repository.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/plugins copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/plugins/installation.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/plugins copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/plugins/legacysupport.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/plugins copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/plugins/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/plugins copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/plugins/managergui_qt.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/plugins copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/plugins/managergui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/plugins copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/invocation.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/colorprinting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/api.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/_cmd.cpython-313-aarch64-linux-gnu.so -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/menu.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/editing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/rpc.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/cgobuilder.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/experimenting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/parser.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/mpeg_encode.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/Qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/Qt/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/Qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/Qt/utils.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/Qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/__main__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/creating.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/setting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/shortcut_manager.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/_gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/locking.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/exporting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/constants.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/xray.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/externing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/lazyio.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/monitoring.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/pymolhttpd.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/feedingback.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/constants_palette.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/importing.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/commanding.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/stereochemistry copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/stereochemistry/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/stereochemistry copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol/vfont.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol2 copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol2/cmd2.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol2 copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pymol2/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol2 creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/render.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/save_object.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/create_shortcut.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/change_confirm.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/load_aln.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/load_traj.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/png.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/load_map.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/shortcut_menu.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/colors.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/pluginitem.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/props.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/askpartial.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/fetch.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/load_mae.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/load_mtz.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/save_molecule.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/pluginmanager.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/movieexport.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/forms/help_shortcut.ui -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/file_dialogs.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/shortcut_menu_gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/advanced_settings_gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/scene_bin_gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/pymol_gl_widget.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/volume.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/properties_dialog.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/builder.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/mimic_pmg_tk.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/mimic_tk.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/syntax copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/syntax/pmlparser.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/syntax copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/syntax/python.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/syntax copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/syntax/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/syntax copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/syntax/pml.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/syntax copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/keymapping.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/TextEditor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_qt/pymol_qt_gui.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/web creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/web/examples copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/web/examples/justhttpd.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/web/examples copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/web/examples/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/web/examples creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/skins creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/skins/normal copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/skins/normal/ModalWindow.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/skins/normal copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/skins/normal/builder.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/skins/normal copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/skins/normal/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/skins/normal copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/skins/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/skins creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/skins/demo copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/skins/demo/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/skins/demo copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/SetEditor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/PMGApp.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/volume.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/PyMOLMapLoad.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/startup copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/startup/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/startup copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/ColorEditor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/TextEditor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/Setting.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/pmg_tk/Demo.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/place.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/bond_mmff.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/protein_residues.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/charge.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/mae.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/protein_amber99.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/water_residues.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/xyz.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/fast copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/fast/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/fast copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/arc.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/pkl.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/gms.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/io.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/dictdb.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/lst.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/cif.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/mass.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/protein_amber.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/sdf.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/models.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/map.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/cc1.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/gamess1.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/bonds.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/water_amber.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/pdb.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/bmin copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/bmin/util.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/bmin copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/bmin/state.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/bmin copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/bmin/realtime.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/bmin copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/bmin/commands.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/bmin copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/bmin/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/bmin copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/cpv.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/mol2.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/mol.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/brick.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/hetatm.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/bond_amber.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/tinker copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/tinker/amber.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/tinker copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/tinker/state.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/tinker copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/tinker/realtime.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/tinker copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/tinker/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/tinker copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/tinker/keyword.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/tinker copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/solvate.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/neighbor.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/mmd.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/mmtf copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/mmtf/io.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/mmtf copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/mmtf/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/mmtf creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/champ copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/champ/assign.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/champ copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/champ/amber99.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/champ copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/champ/_champ.cpython-313-aarch64-linux-gnu.so -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/champ copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/champ/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/champ copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/champ/formal_charges.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/champ copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/protein.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy creating /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/fragments copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/fragments/__init__.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/fragments copying /build/reproducible-path/pymol-3.1.0+dfsg/.pybuild/cpython3_3.13_pymol/build/chempy/protein_mmff.py -> /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard/sculpting.py to sculpting.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard/filter.py to filter.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard/dragging.py to dragging.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard/nucmutagenesis.py to nucmutagenesis.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard/charge.py to charge.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard/distance.py to distance.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard/command.py to command.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard/toggle.py to toggle.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard/message.py to message.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard/label.py to label.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard/cleanup.py to cleanup.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard/density.py to density.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard/pair_fit.py to pair_fit.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard/benchmark.py to benchmark.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard/box.py to box.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard/annotation.py to annotation.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard/renaming.py to renaming.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard/measurement.py to measurement.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard/mutagenesis.py to mutagenesis.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard/pseudoatom.py to pseudoatom.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard/appearance.py to appearance.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard/openvr.py to openvr.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard/stereodemo.py to stereodemo.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard/demo.py to demo.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizard/security.py to security.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/morphing.py to morphing.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/computing.py to computing.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/seqalign.py to seqalign.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/keyboard.py to keyboard.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/shortcut.py to shortcut.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/util.py to util.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/xwin.py to xwin.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/wizarding.py to wizarding.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/diagnosing.py to diagnosing.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/helping.py to helping.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/povray.py to povray.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/controlling.py to controlling.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/fitting.py to fitting.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/preset.py to preset.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/checking.py to checking.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/querying.py to querying.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/callback.py to callback.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/parsing.py to parsing.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/moving.py to moving.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/editor.py to editor.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/shortcut_dict.py to shortcut_dict.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/internal.py to internal.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/selector.py to selector.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/viewing.py to viewing.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/save_shortcut.py to save_shortcut.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/completing.py to completing.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/selecting.py to selecting.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/keywords.py to keywords.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/cgo.py to cgo.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/headering.py to headering.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/movie.py to movie.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/colorramping.py to colorramping.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/gui.py to gui.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/cmd.py to cmd.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/plugins/repository.py to repository.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/plugins/installation.py to installation.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/plugins/legacysupport.py to legacysupport.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/plugins/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/plugins/managergui_qt.py to managergui_qt.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/plugins/managergui.py to managergui.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/invocation.py to invocation.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/colorprinting.py to colorprinting.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/api.py to api.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/menu.py to menu.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/editing.py to editing.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/rpc.py to rpc.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/cgobuilder.py to cgobuilder.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/experimenting.py to experimenting.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/parser.py to parser.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/mpeg_encode.py to mpeg_encode.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/Qt/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/Qt/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/__main__.py to __main__.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/creating.py to creating.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/setting.py to setting.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/shortcut_manager.py to shortcut_manager.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/_gui.py to _gui.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/locking.py to locking.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/exporting.py to exporting.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/constants.py to constants.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/xray.py to xray.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/externing.py to externing.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/lazyio.py to lazyio.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/monitoring.py to monitoring.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/pymolhttpd.py to pymolhttpd.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/feedingback.py to feedingback.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/constants_palette.py to constants_palette.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/importing.py to importing.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/commanding.py to commanding.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/stereochemistry/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol/vfont.py to vfont.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol2/cmd2.py to cmd2.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol2/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/forms/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/file_dialogs.py to file_dialogs.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/shortcut_menu_gui.py to shortcut_menu_gui.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/advanced_settings_gui.py to advanced_settings_gui.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/scene_bin_gui.py to scene_bin_gui.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/pymol_gl_widget.py to pymol_gl_widget.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/volume.py to volume.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/properties_dialog.py to properties_dialog.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/builder.py to builder.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/mimic_pmg_tk.py to mimic_pmg_tk.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/mimic_tk.py to mimic_tk.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/syntax/pmlparser.py to pmlparser.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/syntax/python.py to python.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/syntax/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/syntax/pml.py to pml.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/keymapping.py to keymapping.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/TextEditor.py to TextEditor.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_qt/pymol_qt_gui.py to pymol_qt_gui.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/web/examples/justhttpd.py to justhttpd.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/web/examples/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/skins/normal/ModalWindow.py to ModalWindow.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/skins/normal/builder.py to builder.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/skins/normal/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/skins/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/skins/demo/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/SetEditor.py to SetEditor.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/PMGApp.py to PMGApp.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/volume.py to volume.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/PyMOLMapLoad.py to PyMOLMapLoad.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/startup/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/ColorEditor.py to ColorEditor.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/TextEditor.py to TextEditor.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/Setting.py to Setting.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pmg_tk/Demo.py to Demo.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/place.py to place.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/bond_mmff.py to bond_mmff.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/protein_residues.py to protein_residues.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/charge.py to charge.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/mae.py to mae.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/protein_amber99.py to protein_amber99.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/water_residues.py to water_residues.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/xyz.py to xyz.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/fast/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/arc.py to arc.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/pkl.py to pkl.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/gms.py to gms.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/io.py to io.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/dictdb.py to dictdb.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/lst.py to lst.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/cif.py to cif.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/mass.py to mass.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/protein_amber.py to protein_amber.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/sdf.py to sdf.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/models.py to models.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/map.py to map.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/cc1.py to cc1.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/gamess1.py to gamess1.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/bonds.py to bonds.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/water_amber.py to water_amber.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/pdb.py to pdb.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/bmin/util.py to util.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/bmin/state.py to state.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/bmin/realtime.py to realtime.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/bmin/commands.py to commands.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/bmin/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/cpv.py to cpv.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/mol2.py to mol2.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/mol.py to mol.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/brick.py to brick.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/hetatm.py to hetatm.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/bond_amber.py to bond_amber.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/tinker/amber.py to amber.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/tinker/state.py to state.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/tinker/realtime.py to realtime.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/tinker/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/tinker/keyword.py to keyword.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/solvate.py to solvate.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/neighbor.py to neighbor.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/mmd.py to mmd.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/mmtf/io.py to io.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/mmtf/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/champ/assign.py to assign.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/champ/amber99.py to amber99.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/champ/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/champ/formal_charges.py to formal_charges.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/protein.py to protein.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/fragments/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/chempy/protein_mmff.py to protein_mmff.cpython-313.pyc running install_egg_info Copying modules/pymol.egg-info to /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/lib/python3.13/dist-packages/pymol-3.1.0.egg-info Skipping SOURCES.txt running install_scripts Installing pymol script to /build/reproducible-path/pymol-3.1.0+dfsg/debian/python3-pymol/usr/bin debian/rules override_dh_install-arch make[1]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg' dh_numpy3 dh_install rm -rf debian/python*pymol/usr/bin make[1]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg' dh_installdocs -a -O--buildsystem=pybuild dh_installchangelogs -a -O--buildsystem=pybuild dh_installexamples -a -O--buildsystem=pybuild dh_installman -a -O--buildsystem=pybuild dh_python3 -a -O--buildsystem=pybuild dh_installsystemduser -a -O--buildsystem=pybuild dh_lintian -a -O--buildsystem=pybuild dh_perl -a -O--buildsystem=pybuild dh_link -a -O--buildsystem=pybuild dh_strip_nondeterminism -a -O--buildsystem=pybuild debian/rules override_dh_compress make[1]: Entering directory '/build/reproducible-path/pymol-3.1.0+dfsg' dh_compress -Xpdb make[1]: Leaving directory '/build/reproducible-path/pymol-3.1.0+dfsg' dh_fixperms -a -O--buildsystem=pybuild dh_missing -a -O--buildsystem=pybuild dh_dwz -a -O--buildsystem=pybuild dh_strip -a -O--buildsystem=pybuild dh_makeshlibs -a -O--buildsystem=pybuild dh_shlibdeps -a -O--buildsystem=pybuild dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-aarch64.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged dpkg-shlibdeps: warning: debian/python3-pymol/usr/lib/python3/dist-packages/pymol/_cmd.cpython-314-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyObject_CallMethod: it is probably a plugin dpkg-shlibdeps: warning: 102 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-pymol/usr/lib/python3/dist-packages/chempy/champ/_champ.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyCapsule_Type: it is probably a plugin dpkg-shlibdeps: warning: 23 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-pymol/usr/lib/python3/dist-packages/pymol/_cmd.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyExc_ModuleNotFoundError: it is probably a plugin dpkg-shlibdeps: warning: 102 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-pymol/usr/lib/python3/dist-packages/chempy/champ/_champ.cpython-314-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyModule_Create2: it is probably a plugin dpkg-shlibdeps: warning: 23 other similar warnings have been skipped (use -v to see them all) dh_installdeb -a -O--buildsystem=pybuild dh_gencontrol -a -O--buildsystem=pybuild dh_md5sums -a -O--buildsystem=pybuild dh_builddeb -a -O--buildsystem=pybuild dpkg-deb: building package 'python3-pymol' in '../python3-pymol_3.1.0+dfsg-1+b3_arm64.deb'. dpkg-deb: building package 'python3-pymol-dbgsym' in '../python3-pymol-dbgsym_3.1.0+dfsg-1+b3_arm64.deb'. dpkg-genbuildinfo --build=any -O../pymol_3.1.0+dfsg-1+b3_arm64.buildinfo dpkg-genchanges --build=any -O../pymol_3.1.0+dfsg-1+b3_arm64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2026-04-13T12:06:44Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes Mon, 13 Apr 2026 12:06:45 +0000 | +------------------------------------------------------------------------------+ pymol_3.1.0+dfsg-1+b3_arm64.changes: ------------------------------------ Format: 1.8 Date: Fri, 03 Apr 2026 19:17:09 +0000 Source: pymol (3.1.0+dfsg-1) Binary: python3-pymol python3-pymol-dbgsym Binary-Only: yes Architecture: arm64 Version: 3.1.0+dfsg-1+b3 Distribution: unstable Urgency: low Maintainer: Debichem Team Changed-By: arm Build Daemon (arm-ubc-03) Description: python3-pymol - Molecular Graphics System (Python 3 modules) Changes: pymol (3.1.0+dfsg-1+b3) sid; urgency=low, binary-only=yes . * Binary-only non-maintainer upload for arm64; no source changes. * Rebuild against libglew2.3 Checksums-Sha1: a49345224d2b22f0ab037d4f91e7946b315dedb0 14092 pymol_3.1.0+dfsg-1+b3_arm64.buildinfo 23ed54312e765c483c4908cd1ab209842926f527 42198432 python3-pymol-dbgsym_3.1.0+dfsg-1+b3_arm64.deb f6960cb149aea9c2d019efe9133cd5c16d8a2cc3 6573428 python3-pymol_3.1.0+dfsg-1+b3_arm64.deb Checksums-Sha256: b6286d36ccd1e2108e8cda1f07c8435c308b18a84d14fb6a6f25ae17a6cb3ba0 14092 pymol_3.1.0+dfsg-1+b3_arm64.buildinfo ed1059894850a22ca45d86923b158df7efa527c6599d27a00c079f6b7d5ed57f 42198432 python3-pymol-dbgsym_3.1.0+dfsg-1+b3_arm64.deb 1fa5833d2fbdca57c40be0b1e20b8bf55bad99336d9f01d77812c00b906de2ef 6573428 python3-pymol_3.1.0+dfsg-1+b3_arm64.deb Files: 321985ae02bfc7a4419ca4c519297db7 14092 science optional pymol_3.1.0+dfsg-1+b3_arm64.buildinfo 32e0a61cd4ff46fd83c18d3cd128dc05 42198432 debug optional python3-pymol-dbgsym_3.1.0+dfsg-1+b3_arm64.deb bde6062770b1643502586068b1738bac 6573428 python optional python3-pymol_3.1.0+dfsg-1+b3_arm64.deb +------------------------------------------------------------------------------+ | Buildinfo Mon, 13 Apr 2026 12:06:46 +0000 | +------------------------------------------------------------------------------+ Format: 1.0 Source: pymol (3.1.0+dfsg-1) Binary: python3-pymol python3-pymol-dbgsym Architecture: arm64 Version: 3.1.0+dfsg-1+b3 Binary-Only-Changes: pymol (3.1.0+dfsg-1+b3) sid; urgency=low, binary-only=yes . * Binary-only non-maintainer upload for arm64; no source changes. * Rebuild against libglew2.3 . -- arm Build Daemon (arm-ubc-03) Fri, 03 Apr 2026 19:17:09 +0000 Checksums-Md5: 32e0a61cd4ff46fd83c18d3cd128dc05 42198432 python3-pymol-dbgsym_3.1.0+dfsg-1+b3_arm64.deb bde6062770b1643502586068b1738bac 6573428 python3-pymol_3.1.0+dfsg-1+b3_arm64.deb Checksums-Sha1: 23ed54312e765c483c4908cd1ab209842926f527 42198432 python3-pymol-dbgsym_3.1.0+dfsg-1+b3_arm64.deb f6960cb149aea9c2d019efe9133cd5c16d8a2cc3 6573428 python3-pymol_3.1.0+dfsg-1+b3_arm64.deb Checksums-Sha256: ed1059894850a22ca45d86923b158df7efa527c6599d27a00c079f6b7d5ed57f 42198432 python3-pymol-dbgsym_3.1.0+dfsg-1+b3_arm64.deb 1fa5833d2fbdca57c40be0b1e20b8bf55bad99336d9f01d77812c00b906de2ef 6573428 python3-pymol_3.1.0+dfsg-1+b3_arm64.deb Build-Origin: Debian Build-Architecture: arm64 Build-Date: Mon, 13 Apr 2026 12:06:43 +0000 Build-Path: /build/reproducible-path/pymol-3.1.0+dfsg Installed-Build-Depends: autoconf (= 2.72-6), automake (= 1:1.18.1-4), autopoint (= 0.23.2-2), autotools-dev (= 20240727.1), base-files (= 14), base-passwd (= 3.6.8+b1), bash (= 5.3-2), binutils (= 2.46-3), binutils-aarch64-linux-gnu (= 2.46-3), binutils-common (= 2.46-3), bsdextrautils (= 2.42-1), build-essential (= 12.12), bzip2 (= 1.0.8-6+b1), cmake (= 4.3.1-1), comerr-dev (= 2.1-1.47.4-1), coreutils (= 9.10-1), cpp (= 4:15.2.0-5), cpp-15 (= 15.2.0-16), cpp-15-aarch64-linux-gnu (= 15.2.0-16), cpp-aarch64-linux-gnu (= 4:15.2.0-5), dash (= 0.5.12-12+b1), debconf (= 1.5.92), debhelper (= 13.31), debianutils (= 5.23.2+b1), dh-autoreconf (= 22), dh-python (= 7.20260309), dh-strip-nondeterminism (= 1.15.0-1), diffutils (= 1:3.12-1+b1), dpkg (= 1.23.7), dpkg-dev (= 1.23.7), dwz (= 0.16-4), file (= 1:5.46-5+b1), findutils (= 4.10.0-3+b1), fontconfig (= 2.17.1-5), fontconfig-config (= 2.17.1-5), fonts-dejavu-core (= 2.37-8), fonts-dejavu-mono (= 2.37-8), fonts-lmodern (= 2.005-1), freeglut3-dev (= 3.4.0-6+b1), g++ (= 4:15.2.0-5), g++-15 (= 15.2.0-16), g++-15-aarch64-linux-gnu (= 15.2.0-16), g++-aarch64-linux-gnu (= 4:15.2.0-5), gcc (= 4:15.2.0-5), gcc-15 (= 15.2.0-16), gcc-15-aarch64-linux-gnu (= 15.2.0-16), gcc-15-base (= 15.2.0-16), gcc-16-base (= 16-20260322-1), gcc-aarch64-linux-gnu (= 4:15.2.0-5), gettext (= 0.23.2-2), gettext-base (= 0.23.2-2), grep (= 3.12-1+b1), groff-base (= 1.23.0-10+b1), gzip (= 1.13-1+b1), hdf5-helpers (= 1.14.6+repack-2), hostname (= 3.25+b1), init-system-helpers (= 1.69), intltool-debian (= 0.35.0+20060710.6), krb5-multidev (= 1.22.1-2), libacl1 (= 2.3.2-3), libaec-dev (= 1.1.6-1), libaec0 (= 1.1.6-1), libarchive-zip-perl (= 1.68-1), libarchive13t64 (= 3.8.5-1), libasan8 (= 16-20260322-1), libatomic1 (= 16-20260322-1), libattr1 (= 1:2.5.2-4), libaudit-common (= 1:4.1.2-1), libaudit1 (= 1:4.1.2-1+b1), libavahi-client3 (= 0.8-18), libavahi-common-data (= 0.8-18), libavahi-common3 (= 0.8-18), libbinutils (= 2.46-3), libblas3 (= 3.12.1-7+b1), libblkid1 (= 2.42-1), libbrotli-dev (= 1.2.0-3), libbrotli1 (= 1.2.0-3), libbsd0 (= 0.12.2-2+b1), libbz2-1.0 (= 1.0.8-6+b1), libbz2-dev (= 1.0.8-6+b1), libc-bin (= 2.42-14), libc-dev-bin (= 2.42-14), libc-gconv-modules-extra (= 2.42-14), libc6 (= 2.42-14), libc6-dev (= 2.42-14), libcairo2 (= 1.18.4-3), libcap-ng0 (= 0.9.2-1), libcc1-0 (= 16-20260322-1), libcom-err2 (= 1.47.4-1), libcrypt1 (= 1:4.5.1-1), libctf-nobfd0 (= 2.46-3), libctf0 (= 2.46-3), libcups2t64 (= 2.4.16-1), libcurl3t64-gnutls (= 8.19.0-3), libcurl4-openssl-dev (= 8.19.0-3), libcurl4t64 (= 8.19.0-3), libdb5.3t64 (= 5.3.28+dfsg2-11), libdbus-1-3 (= 1.16.2-4), libdebconfclient0 (= 0.282+b2), libdebhelper-perl (= 13.31), libdouble-conversion3 (= 3.4.0-1), libdpkg-perl (= 1.23.7), libdrm-amdgpu1 (= 2.4.131-1), libdrm-common (= 2.4.131-1), libdrm2 (= 2.4.131-1), libedit2 (= 3.1-20251016-1), libegl-mesa0 (= 26.0.4-1), libegl1 (= 1.7.0-3), libelf1t64 (= 0.194-4), libevdev2 (= 1.13.6+dfsg-1), libevent-2.1-7t64 (= 2.1.12-stable-10+b2), libexpat1 (= 2.7.5-1), libexpat1-dev (= 2.7.5-1), libffi8 (= 3.5.2-4), libfile-stripnondeterminism-perl (= 1.15.0-1), libfontconfig1 (= 2.17.1-5), libfreetype-dev (= 2.14.3+dfsg-1), libfreetype6 (= 2.14.3+dfsg-1), libgbm1 (= 26.0.4-1), libgcc-15-dev (= 15.2.0-16), libgcc-s1 (= 16-20260322-1), libgdbm-compat4t64 (= 1.26-1+b1), libgdbm6t64 (= 1.26-1+b1), libgfortran5 (= 16-20260322-1), libgl-dev (= 1.7.0-3), libgl1 (= 1.7.0-3), libgl1-mesa-dri (= 26.0.4-1), libgles2 (= 1.7.0-3), libglew-dev (= 2.3.1-3), libglew2.3 (= 2.3.1-3), libglib2.0-0t64 (= 2.88.0-1), libglm-dev (= 1.0.1+ds-3), libglu1-mesa (= 9.0.2-1.1+b4), libglu1-mesa-dev (= 9.0.2-1.1+b4), libglut-dev (= 3.4.0-6+b1), libglut3.12 (= 3.4.0-6+b1), libglvnd0 (= 1.7.0-3), libglx-dev (= 1.7.0-3), libglx-mesa0 (= 26.0.4-1), libglx0 (= 1.7.0-3), libgmp-dev (= 2:6.3.0+dfsg-5+b1), libgmp10 (= 2:6.3.0+dfsg-5+b1), libgmpxx4ldbl (= 2:6.3.0+dfsg-5+b1), libgnutls-dane0t64 (= 3.8.12-3), libgnutls28-dev (= 3.8.12-3), libgnutls30t64 (= 3.8.12-3), libgomp1 (= 16-20260322-1), libgprofng0 (= 2.46-3), libgraphite2-3 (= 1.3.14-13), libgssapi-krb5-2 (= 1.22.1-2), libgssrpc4t64 (= 1.22.1-2), libgudev-1.0-0 (= 238-7+b1), libharfbuzz0b (= 12.3.2-2+b2), libhdf5-310 (= 1.14.6+repack-2), libhdf5-cpp-310 (= 1.14.6+repack-2), libhdf5-dev (= 1.14.6+repack-2), libhdf5-fortran-310 (= 1.14.6+repack-2), libhdf5-hl-310 (= 1.14.6+repack-2), libhdf5-hl-cpp-310 (= 1.14.6+repack-2), libhdf5-hl-fortran-310 (= 1.14.6+repack-2), libhogweed6t64 (= 3.10.2-1), libhwasan0 (= 16-20260322-1), libice-dev (= 2:1.1.1-1+b1), libice6 (= 2:1.1.1-1+b1), libicu78 (= 78.3-1), libidn2-0 (= 2.3.8-4+b1), libidn2-dev (= 2.3.8-4+b1), libinput-bin (= 1.31.0-1), libinput10 (= 1.31.0-1), libisl23 (= 0.27-2), libitm1 (= 16-20260322-1), libjansson4 (= 2.14-2+b4), libjpeg-dev (= 1:2.1.5-4), libjpeg62-turbo (= 1:2.1.5-4), libjpeg62-turbo-dev (= 1:2.1.5-4), libjs-sphinxdoc (= 8.2.3-12), libjsoncpp26 (= 1.9.6-5), libk5crypto3 (= 1.22.1-2), libkadm5clnt-mit12 (= 1.22.1-2), libkadm5srv-mit12 (= 1.22.1-2), libkdb5-10t64 (= 1.22.1-2), libkeyutils1 (= 1.6.3-6+b1), libkpathsea6 (= 2025.20250727.75242+ds-5+b2), libkrb5-3 (= 1.22.1-2), libkrb5-dev (= 1.22.1-2), libkrb5support0 (= 1.22.1-2), liblapack3 (= 3.12.1-7+b1), libldap-dev (= 2.6.10+dfsg-1+b1), libldap2 (= 2.6.10+dfsg-1+b1), libllvm21 (= 1:21.1.8-7), liblsan0 (= 16-20260322-1), liblz4-1 (= 1.10.0-8), liblzma-dev (= 5.8.2-2), liblzma5 (= 5.8.2-2), libmagic-mgc (= 1:5.46-5+b1), libmagic1t64 (= 1:5.46-5+b1), libmd0 (= 1.1.0-2+b2), libmd4c0 (= 0.5.2-2+b2), libmount1 (= 2.42-1), libmpc3 (= 1.3.1-3), libmpfi0 (= 1.5.4+ds-5), libmpfr6 (= 4.2.2-3), libmtdev1t64 (= 1.1.7-1+b1), libncursesw6 (= 6.6+20251231-1), libnetcdf-dev (= 1:4.10.0-1), libnetcdf22 (= 1:4.10.0-1), libnettle8t64 (= 3.10.2-1), libnghttp2-14 (= 1.68.1-1), libnghttp2-dev (= 1.68.1-1), libnghttp3-9 (= 1.15.0-1), libnghttp3-dev (= 1.15.0-1), libngtcp2-16 (= 1.21.0-1), libngtcp2-crypto-gnutls8 (= 1.21.0-1), libngtcp2-crypto-ossl-dev (= 1.21.0-1), libngtcp2-crypto-ossl0 (= 1.21.0-1), libngtcp2-dev (= 1.21.0-1), libopengl-dev (= 1.7.0-3), libopengl0 (= 1.7.0-3), libp11-kit-dev (= 0.26.2-2), libp11-kit0 (= 0.26.2-2), libpam-modules (= 1.7.0-5+b1), libpam-modules-bin (= 1.7.0-5+b1), libpam-runtime (= 1.7.0-5), libpam0g (= 1.7.0-5+b1), libpaper-utils (= 2.2.5-0.3+b3), libpaper2 (= 2.2.5-0.3+b3), libpcre2-16-0 (= 10.46-1+b1), libpcre2-8-0 (= 10.46-1+b1), libperl5.40 (= 5.40.1-7), libpipeline1 (= 1.5.8-2), libpixman-1-0 (= 0.46.4-1+b1), libpkgconf7 (= 2.5.1-4), libpng-dev (= 1.6.56-1), libpng16-16t64 (= 1.6.56-1), libpotrace0 (= 1.16-2+b3), libproc2-0 (= 2:4.0.4-9+b1), libpsl-dev (= 0.21.5-1), libpsl5t64 (= 0.21.5-1), libptexenc1 (= 2025.20250727.75242+ds-5+b2), libpython3-all-dev (= 3.13.9-3), libpython3-dev (= 3.13.9-3), libpython3-stdlib (= 3.13.9-3), libpython3.13 (= 3.13.12-1), libpython3.13-dev (= 3.13.12-1), libpython3.13-minimal (= 3.13.12-1), libpython3.13-stdlib (= 3.13.12-1), libpython3.14 (= 3.14.3-5), libpython3.14-dev (= 3.14.3-5), libpython3.14-minimal (= 3.14.3-5), libpython3.14-stdlib (= 3.14.3-5), libqt5core5t64 (= 5.15.17+dfsg-7+b1), libqt5dbus5t64 (= 5.15.17+dfsg-7+b1), libqt5designer5 (= 5.15.17-4+b1), libqt5gui5t64 (= 5.15.17+dfsg-7+b1), libqt5help5 (= 5.15.17-4+b1), libqt5network5t64 (= 5.15.17+dfsg-7+b1), libqt5opengl5t64 (= 5.15.17+dfsg-7+b1), libqt5printsupport5t64 (= 5.15.17+dfsg-7+b1), libqt5sql5t64 (= 5.15.17+dfsg-7+b1), libqt5test5t64 (= 5.15.17+dfsg-7+b1), libqt5widgets5t64 (= 5.15.17+dfsg-7+b1), libqt5xml5t64 (= 5.15.17+dfsg-7+b1), libreadline8t64 (= 8.3-4), librhash1 (= 1.4.6-1.1), librtmp-dev (= 2.4+20151223.gitfa8646d.1-3+b1), librtmp1 (= 2.4+20151223.gitfa8646d.1-3+b1), libsasl2-2 (= 2.1.28+dfsg1-10), libsasl2-modules-db (= 2.1.28+dfsg1-10), libseccomp2 (= 2.6.0-2+b1), libselinux1 (= 3.9-4+b1), libsensors-config (= 1:3.6.2-2), libsensors5 (= 1:3.6.2-2+b1), libsframe3 (= 2.46-3), libsm-dev (= 2:1.2.6-1+b1), libsm6 (= 2:1.2.6-1+b1), libsmartcols1 (= 2.42-1), libsqlite3-0 (= 3.46.1-9+b1), libssh2-1-dev (= 1.11.1-2), libssh2-1t64 (= 1.11.1-2), libssl-dev (= 3.6.1-3), libssl3t64 (= 3.6.1-3), libstdc++-15-dev (= 15.2.0-16), libstdc++6 (= 16-20260322-1), libsynctex2 (= 2025.20250727.75242+ds-5+b2), libsystemd0 (= 260.1-1), libsz2 (= 1.1.6-1), libtasn1-6 (= 4.21.0-2), libtasn1-6-dev (= 4.21.0-2), libteckit0 (= 2.5.13+ds-1), libtexlua53-5 (= 2025.20250727.75242+ds-5+b2), libtext-charwidth-perl (= 0.04-11+b5), libtext-wrapi18n-perl (= 0.06-10), libtinfo6 (= 6.6+20251231-1), libtool (= 2.5.4-10), libtsan2 (= 16-20260322-1), libubsan1 (= 16-20260322-1), libuchardet0 (= 0.0.8-2+b1), libudev1 (= 260.1-1), libunbound8 (= 1.24.2-1), libunistring5 (= 1.4.2-1), libuuid1 (= 2.42-1), libuv1t64 (= 1.51.0-2+b1), libvulkan1 (= 1.4.341.0-1), libwacom-common (= 2.18.0-1), libwacom9 (= 2.18.0-1), libwayland-client0 (= 1.24.0-2+b2), libx11-6 (= 2:1.8.13-1), libx11-data (= 2:1.8.13-1), libx11-dev (= 2:1.8.13-1), libx11-xcb1 (= 2:1.8.13-1), libxau-dev (= 1:1.0.11-1+b1), libxau6 (= 1:1.0.11-1+b1), libxaw7 (= 2:1.0.16-1+b1), libxcb-dri3-0 (= 1.17.0-2+b2), libxcb-glx0 (= 1.17.0-2+b2), libxcb-icccm4 (= 0.4.2-1+b1), libxcb-image0 (= 0.4.0-2+b3), libxcb-keysyms1 (= 0.4.1-1+b1), libxcb-present0 (= 1.17.0-2+b2), libxcb-randr0 (= 1.17.0-2+b2), libxcb-render-util0 (= 0.3.10-1+b1), libxcb-render0 (= 1.17.0-2+b2), libxcb-shape0 (= 1.17.0-2+b2), libxcb-shm0 (= 1.17.0-2+b2), libxcb-sync1 (= 1.17.0-2+b2), libxcb-util1 (= 0.4.1-1+b1), libxcb-xfixes0 (= 1.17.0-2+b2), libxcb-xinerama0 (= 1.17.0-2+b2), libxcb-xinput0 (= 1.17.0-2+b2), libxcb-xkb1 (= 1.17.0-2+b2), libxcb1 (= 1.17.0-2+b2), libxcb1-dev (= 1.17.0-2+b2), libxdmcp-dev (= 1:1.1.5-2), libxdmcp6 (= 1:1.1.5-2), libxext-dev (= 2:1.3.4-1+b4), libxext6 (= 2:1.3.4-1+b4), libxi6 (= 2:1.8.2-2), libxkbcommon-x11-0 (= 1.13.1-1), libxkbcommon0 (= 1.13.1-1), libxml2-16 (= 2.15.2+dfsg-0.1), libxml2-dev (= 2.15.2+dfsg-0.1), libxmu6 (= 2:1.1.3-4), libxpm4 (= 1:3.5.17-1+b4), libxrender1 (= 1:0.9.12-1+b1), libxshmfence1 (= 1.3.3-1+b1), libxt-dev (= 1:1.2.1-1.3+b1), libxt6t64 (= 1:1.2.1-1.3+b1), libxxf86vm1 (= 1:1.1.4-2), libxxhash0 (= 0.8.3-2+b1), libz3-4 (= 4.13.3-1+b1), libzstd-dev (= 1.5.7+dfsg-3+b1), libzstd1 (= 1.5.7+dfsg-3+b1), libzzip-0-13t64 (= 0.13.78+dfsg.1-0.2), linux-libc-dev (= 6.19.10-1), m4 (= 1.4.21-1), make (= 4.4.1-3+b1), man-db (= 2.13.1-1+b1), mawk (= 1.3.4.20260302-1), media-types (= 14.0.0), mesa-libgallium (= 26.0.4-1), ncurses-base (= 6.6+20251231-1), ncurses-bin (= 6.6+20251231-1), netbase (= 6.5), nettle-dev (= 3.10.2-1), openssl-provider-legacy (= 3.6.1-3), patch (= 2.8-2+b1), perl (= 5.40.1-7), perl-base (= 5.40.1-7), perl-modules-5.40 (= 5.40.1-7), pkgconf (= 2.5.1-4), pkgconf-bin (= 2.5.1-4), po-debconf (= 1.0.22), procps (= 2:4.0.4-9+b1), python3 (= 3.13.9-3), python3-all (= 3.13.9-3), python3-all-dev (= 3.13.9-3), python3-autocommand (= 2.2.2-4), python3-dev (= 3.13.9-3), python3-inflect (= 7.5.0-1), python3-jaraco.context (= 6.0.1-2), python3-jaraco.functools (= 4.1.0-1), python3-jaraco.text (= 4.0.0-1), python3-minimal (= 3.13.9-3), python3-more-itertools (= 10.8.0-1), python3-numpy (= 1:2.3.5+ds-3), python3-numpy-dev (= 1:2.3.5+ds-3), python3-opengl (= 3.1.10+dfsg-1), python3-pkg-resources (= 78.1.1-0.1), python3-pyqt5 (= 5.15.11+dfsg-3), python3-pyqt5.qtopengl (= 5.15.11+dfsg-3), python3-pyqt5.sip (= 12.17.2-1), python3-setuptools (= 78.1.1-0.1), python3-typeguard (= 4.4.4-2), python3-typing-extensions (= 4.15.0-2), python3-zipp (= 3.23.0-1), python3.13 (= 3.13.12-1), python3.13-dev (= 3.13.12-1), python3.13-minimal (= 3.13.12-1), python3.14 (= 3.14.3-5), python3.14-dev (= 3.14.3-5), python3.14-minimal (= 3.14.3-5), readline-common (= 8.3-4), rpcsvc-proto (= 1.4.3-1+b2), sed (= 4.9-2+b2), sensible-utils (= 0.0.26), shared-mime-info (= 2.4-5+b4), sysvinit-utils (= 3.18-1), t1utils (= 1.41-4+b2), tar (= 1.35+dfsg-4), tex-common (= 6.20), texlive-base (= 2025.20260124-1), texlive-binaries (= 2025.20250727.75242+ds-5+b2), texlive-latex-base (= 2025.20260124-1), tzdata (= 2026a-3), ucf (= 3.0053), util-linux (= 2.42-1), uuid-dev (= 2.42-1), x11-common (= 1:7.7+26), x11proto-dev (= 2025.1-1), xdg-utils (= 1.2.1-2), xkb-data (= 2.47-1), xorg-sgml-doctools (= 1:1.12.1-1), xtrans-dev (= 1.6.0-1), xz-utils (= 5.8.2-2), zlib1g (= 1:1.3.dfsg+really1.3.2-3), zlib1g-dev (= 1:1.3.dfsg+really1.3.2-3) Environment: DEB_BUILD_OPTIONS="parallel=8" LANG="C.UTF-8" LC_COLLATE="C.UTF-8" LC_CTYPE="C.UTF-8" SOURCE_DATE_EPOCH="1775243829" +------------------------------------------------------------------------------+ | Package contents Mon, 13 Apr 2026 12:06:47 +0000 | +------------------------------------------------------------------------------+ python3-pymol-dbgsym_3.1.0+dfsg-1+b3_arm64.deb ---------------------------------------------- new Debian package, version 2.0. size 42198432 bytes: control archive=764 bytes. 524 bytes, 12 lines control 515 bytes, 5 lines md5sums Package: python3-pymol-dbgsym Source: pymol (3.1.0+dfsg-1) Version: 3.1.0+dfsg-1+b3 Auto-Built-Package: debug-symbols Architecture: arm64 Maintainer: Debichem Team Installed-Size: 52697 Depends: python3-pymol (= 3.1.0+dfsg-1+b3) Section: debug Priority: optional Description: debug symbols for python3-pymol Build-Ids: 0643666f37454083d207105e4ecf3bd1ab81b674 25f9da6a48c85e4faa1cddbc97d969a9db198b95 5716e2043cd99ca7c27c291ab7aa3e0d8a38a3a9 849b17089d75f8e5227c5cd75782684a69fcc305 drwxr-xr-x root/root 0 2026-04-03 19:17 ./ drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/ drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/lib/ drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/lib/debug/ drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/lib/debug/.build-id/06/ -rw-r--r-- root/root 190000 2026-04-03 19:17 ./usr/lib/debug/.build-id/06/43666f37454083d207105e4ecf3bd1ab81b674.debug drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/lib/debug/.build-id/25/ -rw-r--r-- root/root 24222544 2026-04-03 19:17 ./usr/lib/debug/.build-id/25/f9da6a48c85e4faa1cddbc97d969a9db198b95.debug drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/lib/debug/.build-id/57/ -rw-r--r-- root/root 190032 2026-04-03 19:17 ./usr/lib/debug/.build-id/57/16e2043cd99ca7c27c291ab7aa3e0d8a38a3a9.debug drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/lib/debug/.build-id/84/ -rw-r--r-- root/root 24244944 2026-04-03 19:17 ./usr/lib/debug/.build-id/84/9b17089d75f8e5227c5cd75782684a69fcc305.debug drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/lib/debug/.dwz/aarch64-linux-gnu/ -rw-r--r-- root/root 5096848 2026-04-03 19:17 ./usr/lib/debug/.dwz/aarch64-linux-gnu/python3-pymol.debug drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/share/ drwxr-xr-x root/root 0 2026-04-03 19:17 ./usr/share/doc/ lrwxrwxrwx root/root 0 2026-04-03 19:17 ./usr/share/doc/python3-pymol-dbgsym -> python3-pymol python3-pymol_3.1.0+dfsg-1+b3_arm64.deb --------------------------------------- new Debian package, version 2.0. size 6573428 bytes: control archive=7088 bytes. 1367 bytes, 26 lines control 19357 bytes, 225 lines md5sums 281 bytes, 12 lines * postinst #!/bin/sh 419 bytes, 12 lines * prerm #!/bin/sh Package: python3-pymol Source: pymol (3.1.0+dfsg-1) Version: 3.1.0+dfsg-1+b3 Architecture: arm64 Maintainer: Debichem Team Installed-Size: 22552 Depends: python3-legacy-cgi, python3-numpy, python3-opengl, python3-pyqt5, python3-pyqt5.qtopengl, python3-numpy2-abi0 | python3-numpy-abi9, python3 (<< 3.15), python3 (>= 3.13~), python3:any, libc6 (>= 2.38), libfreetype6 (>= 2.2.1), libgcc-s1 (>= 3.0), libgl1, libglew2.3 (>= 2.3.1), libgomp1 (>= 4.9), libnetcdf22 (>= 3.6.1), libpng16-16t64 (>= 1.6.46), libstdc++6 (>= 13.1), libxml2-16 (>= 2.14.1), pymol-data (= 3.1.0+dfsg-1) Section: python Priority: optional Homepage: https://www.pymol.org Description: Molecular Graphics System (Python 3 modules) PyMOL is a molecular graphics system targeted at medium to large biomolecules like proteins. It can generate high-quality publication-ready molecular graphics images and animations. . Features include: * Visualization of molecules, molecular trajectories and surfaces of crystallography data or orbitals * Molecular builder and sculptor * Internal raytracer and movie generator * Fully extensible and scriptable via a Python interface . File formats PyMOL can read include PDB, XYZ, CIF, MDL Molfile, ChemDraw, CCP4 maps, XPLOR maps and Gaussian cube maps. . 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-rw-r--r-- root/root 476 2025-03-16 22:52 ./usr/share/lintian/overrides/python3-pymol +------------------------------------------------------------------------------+ | Post Build Mon, 13 Apr 2026 12:06:50 +0000 | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup Mon, 13 Apr 2026 12:06:50 +0000 | +------------------------------------------------------------------------------+ Purging /build/reproducible-path Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary Mon, 13 Apr 2026 12:06:55 +0000 | +------------------------------------------------------------------------------+ Build Architecture: arm64 Build Type: any Build-Space: 840892 Build-Time: 281 Distribution: unstable Host Architecture: arm64 Install-Time: 5 Job: /srv/rebuilderd/tmp/rebuilderdnlMl6s/inputs/pymol_3.1.0+dfsg-1.dsc Machine Architecture: arm64 Package: pymol Package-Time: 302 Source-Version: 3.1.0+dfsg-1 Space: 840892 Status: successful Version: 3.1.0+dfsg-1+b3 -------------------------------------------------------------------------------- Finished at 2026-04-13T12:06:44Z Build needed 00:05:02, 840892k disk space build artifacts stored in /srv/rebuilderd/tmp/rebuilderdnlMl6s/out checking python3-pymol-dbgsym_3.1.0+dfsg-1+b3_arm64.deb: size differs for python3-pymol-dbgsym_3.1.0+dfsg-1+b3_arm64.deb