=============================================================================== About this build: this rebuild has been done as part of reproduce.debian.net where we aim to reproduce Debian binary packages distributed via ftp.debian.org, by rebuilding using the exact same packages as the original build on the buildds, as described in the relevant .buildinfo file from buildinfos.debian.net. For more information please go to https://reproduce.debian.net or join #debian-reproducible on irc.debian.org =============================================================================== Preparing download of sources for /srv/rebuilderd/tmp/rebuilderdANrAbN/inputs/mrtrix3_3.0.8-4_arm64.buildinfo Source: mrtrix3 Version: 3.0.8-4 rebuilderd-worker node: codethink02-arm64 +------------------------------------------------------------------------------+ | Downloading sources Tue, 27 Oct 2026 08:21:38 +0000 | +------------------------------------------------------------------------------+ Get:1 https://deb.debian.org/debian trixie InRelease [140 kB] Get:2 https://deb.debian.org/debian-security trixie-security InRelease [43.4 kB] Get:3 https://deb.debian.org/debian trixie-updates InRelease [47.3 kB] Get:4 https://deb.debian.org/debian trixie-proposed-updates InRelease [57.7 kB] Get:5 https://deb.debian.org/debian trixie-backports InRelease [54.0 kB] Get:6 https://deb.debian.org/debian forky InRelease [151 kB] Get:7 https://deb.debian.org/debian sid InRelease [193 kB] Get:8 https://deb.debian.org/debian experimental InRelease [91.7 kB] Get:9 https://deb.debian.org/debian trixie/non-free-firmware Sources [6552 B] Get:10 https://deb.debian.org/debian trixie/main Sources [10.5 MB] Get:11 https://deb.debian.org/debian-security trixie-security/non-free-firmware Sources [696 B] Get:12 https://deb.debian.org/debian-security trixie-security/main Sources [241 kB] Get:13 https://deb.debian.org/debian trixie-updates/main Sources [820 B] Get:14 https://deb.debian.org/debian trixie-proposed-updates/main Sources [148 kB] Get:15 https://deb.debian.org/debian trixie-backports/main Sources [335 kB] Get:16 https://deb.debian.org/debian trixie-backports/non-free-firmware Sources [3436 B] Get:17 https://deb.debian.org/debian forky/non-free-firmware Sources [7896 B] Get:18 https://deb.debian.org/debian forky/main Sources [11.4 MB] Get:19 https://deb.debian.org/debian sid/main Sources [12.1 MB] Get:20 https://deb.debian.org/debian sid/non-free-firmware Sources [10.7 kB] Get:21 https://deb.debian.org/debian experimental/non-free-firmware Sources [2568 B] Get:22 https://deb.debian.org/debian experimental/main Sources [364 kB] Fetched 35.9 MB in 4s (10.2 MB/s) Reading package lists... 'https://deb.debian.org/debian/pool/main/m/mrtrix3/mrtrix3_3.0.8-4.dsc' mrtrix3_3.0.8-4.dsc 1900 SHA256:d93a2196792d641de7d8a790360986bacf505fa33eb37c526fa4b747e3336ad1 'https://deb.debian.org/debian/pool/main/m/mrtrix3/mrtrix3_3.0.8.orig.tar.gz' mrtrix3_3.0.8.orig.tar.gz 4057854 SHA256:7ca0ec513fe32421f453b8bdc5a7355a4563fd0247eea92fd5998ebd81a988aa 'https://deb.debian.org/debian/pool/main/m/mrtrix3/mrtrix3_3.0.8-4.debian.tar.xz' mrtrix3_3.0.8-4.debian.tar.xz 12084 SHA256:a73f0cca1736f33588e7f51d46ee8fc3cc4b3651afffc06f711167e4d66c6c87 7ca0ec513fe32421f453b8bdc5a7355a4563fd0247eea92fd5998ebd81a988aa mrtrix3_3.0.8.orig.tar.gz a73f0cca1736f33588e7f51d46ee8fc3cc4b3651afffc06f711167e4d66c6c87 mrtrix3_3.0.8-4.debian.tar.xz d93a2196792d641de7d8a790360986bacf505fa33eb37c526fa4b747e3336ad1 mrtrix3_3.0.8-4.dsc +------------------------------------------------------------------------------+ | Calling debrebuild Tue, 27 Oct 2026 08:21:42 +0000 | +------------------------------------------------------------------------------+ Rebuilding mrtrix3=3.0.8-4 in /srv/rebuilderd/tmp/rebuilderdANrAbN/inputs now. + /usr/bin/debrebuild --buildresult=/srv/rebuilderd/tmp/rebuilderdANrAbN/out --builder=sbuild+unshare --cache=/srv/rebuilderd/cache -- /srv/rebuilderd/tmp/rebuilderdANrAbN/inputs/mrtrix3_3.0.8-4_arm64.buildinfo /srv/rebuilderd/tmp/rebuilderdANrAbN/inputs/mrtrix3_3.0.8-4_arm64.buildinfo contains a GPG signature which has NOT been validated Using defined Build-Path: /build/reproducible-path/mrtrix3-3.0.8 I: verifying dsc... successful! Get:1 http://deb.debian.org/debian unstable InRelease [193 kB] Get:2 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable InRelease [193 kB] Get:3 http://deb.debian.org/debian unstable/main arm64 Packages [10.7 MB] Get:4 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 Packages [10.7 MB] Fetched 21.8 MB in 2s (9933 kB/s) Reading package lists... W: http://snapshot.debian.org/archive/debian/20261022T082531Z/dists/unstable/InRelease: Loading /etc/apt/trusted.gpg from deprecated option Dir::Etc::Trusted Get:1 http://deb.debian.org/debian unstable/main arm64 libacl1 arm64 2.4.0-1 [36.0 kB] Get:2 http://deb.debian.org/debian unstable/main arm64 libasound2-data all 1.2.16.1-2 [19.4 kB] Get:3 http://deb.debian.org/debian unstable/main arm64 libasound2t64 arm64 1.2.16.1-2 [347 kB] Get:4 http://deb.debian.org/debian unstable/main arm64 libarpack2t64 arm64 3.9.1-6+b2 [81.7 kB] Get:5 http://deb.debian.org/debian unstable/main arm64 libattr1 arm64 1:2.6.0-1 [24.3 kB] Get:6 http://deb.debian.org/debian unstable/main arm64 libaudit-common all 1:4.2.1-1 [13.3 kB] Get:7 http://deb.debian.org/debian unstable/main arm64 libaudit1 arm64 1:4.2.1-1 [58.2 kB] Get:8 http://deb.debian.org/debian unstable/main arm64 autoconf all 2.73-2 [516 kB] Get:9 http://deb.debian.org/debian unstable/main arm64 automake all 1:1.19-3 [892 kB] Get:10 http://deb.debian.org/debian unstable/main arm64 autotools-dev all 20240727.1+nmu1 [60.0 kB] Get:11 http://deb.debian.org/debian unstable/main arm64 libavahi-client3 arm64 0.8-18 [47.1 kB] Get:12 http://deb.debian.org/debian unstable/main arm64 libavahi-common-data arm64 0.8-18 [113 kB] Get:13 http://deb.debian.org/debian unstable/main arm64 libavahi-common3 arm64 0.8-18 [43.4 kB] Get:14 http://deb.debian.org/debian unstable/main arm64 base-files arm64 14.2 [87.9 kB] Get:15 http://deb.debian.org/debian unstable/main arm64 base-passwd arm64 3.6.8+b1 [54.3 kB] Get:16 http://deb.debian.org/debian unstable/main arm64 bash arm64 5.3-4 [1502 kB] Get:17 http://deb.debian.org/debian unstable/main arm64 bc arm64 1.07.1-4+b2 [101 kB] Get:18 http://deb.debian.org/debian unstable/main arm64 binutils arm64 2.47.50.20261021-1 [282 kB] Get:19 http://deb.debian.org/debian unstable/main arm64 binutils-aarch64-linux-gnu arm64 2.47.50.20261021-1 [900 kB] Get:20 http://deb.debian.org/debian unstable/main arm64 binutils-common arm64 2.47.50.20261021-1 [2687 kB] Get:21 http://deb.debian.org/debian unstable/main arm64 libbinutils arm64 2.47.50.20261021-1 [691 kB] Get:22 http://deb.debian.org/debian unstable/main arm64 build-essential arm64 12.12 [4624 B] Get:23 http://deb.debian.org/debian unstable/main arm64 bzip2 arm64 1.0.8-6+b2 [39.2 kB] Get:24 http://deb.debian.org/debian unstable/main arm64 libbz2-1.0 arm64 1.0.8-6+b2 [36.6 kB] Get:25 http://deb.debian.org/debian unstable/main arm64 libcairo2 arm64 1.18.4-3+b1 [477 kB] Get:26 http://deb.debian.org/debian unstable/main arm64 coreutils arm64 9.10-1 [3049 kB] Get:27 http://deb.debian.org/debian unstable/main arm64 dash arm64 0.5.12-12+b1 [95.6 kB] Get:28 http://deb.debian.org/debian unstable/main arm64 debconf all 1.5.92 [123 kB] Get:29 http://deb.debian.org/debian unstable/main arm64 debhelper all 14.5 [944 kB] Get:30 http://deb.debian.org/debian unstable/main arm64 debianutils arm64 5.24 [93.1 kB] Get:31 http://deb.debian.org/debian unstable/main arm64 dh-autoreconf all 23 [12.7 kB] Get:32 http://deb.debian.org/debian unstable/main arm64 diffutils arm64 1:3.12-1+b1 [398 kB] Get:33 http://deb.debian.org/debian unstable/main arm64 dpkg arm64 1.23.11 [1187 kB] Get:34 http://deb.debian.org/debian unstable/main arm64 dpkg-dev all 1.23.11 [1005 kB] Get:35 http://deb.debian.org/debian unstable/main arm64 dwz arm64 0.17-1 [100 kB] Get:36 http://deb.debian.org/debian unstable/main arm64 comerr-dev arm64 2.1-1.47.4-1+b2 [51.4 kB] Get:37 http://deb.debian.org/debian unstable/main arm64 file arm64 1:5.47-4 [43.2 kB] Get:38 http://deb.debian.org/debian unstable/main arm64 findutils arm64 4.11.0-3 [770 kB] Get:39 http://deb.debian.org/debian unstable/main arm64 fontconfig arm64 2.17.1-5 [191 kB] Get:40 http://deb.debian.org/debian unstable/main arm64 fontconfig-config arm64 2.17.1-5 [56.1 kB] Get:41 http://deb.debian.org/debian unstable/main arm64 fonts-dejavu-core all 2.37-9 [840 kB] Get:42 http://deb.debian.org/debian unstable/main arm64 fonts-dejavu-mono all 2.37-9 [488 kB] Get:43 http://deb.debian.org/debian unstable/main arm64 cpp arm64 4:16.1.0-3 [1564 B] Get:44 http://deb.debian.org/debian unstable/main arm64 cpp-aarch64-linux-gnu arm64 4:16.1.0-3 [4464 B] Get:45 http://deb.debian.org/debian unstable/main arm64 g++ arm64 4:16.1.0-3 [1328 B] Get:46 http://deb.debian.org/debian unstable/main arm64 g++-aarch64-linux-gnu arm64 4:16.1.0-3 [1196 B] Get:47 http://deb.debian.org/debian unstable/main arm64 gcc arm64 4:16.1.0-3 [5144 B] Get:48 http://deb.debian.org/debian unstable/main arm64 gcc-aarch64-linux-gnu arm64 4:16.1.0-3 [1436 B] Get:49 http://deb.debian.org/debian unstable/main arm64 gfortran arm64 4:16.1.0-3 [1428 B] Get:50 http://deb.debian.org/debian unstable/main arm64 gfortran-aarch64-linux-gnu arm64 4:16.1.0-3 [1280 B] Get:51 http://deb.debian.org/debian unstable/main arm64 autopoint all 1.0-5 [820 kB] Get:52 http://deb.debian.org/debian unstable/main arm64 gettext arm64 1.0-5 [2549 kB] Get:53 http://deb.debian.org/debian unstable/main arm64 gettext-base arm64 1.0-5 [328 kB] Get:54 http://deb.debian.org/debian unstable/main arm64 libc-bin arm64 2.43-7 [530 kB] Get:55 http://deb.debian.org/debian unstable/main arm64 libc-dev-bin arm64 2.43-7 [38.6 kB] Get:56 http://deb.debian.org/debian unstable/main arm64 libc-gconv-modules-extra arm64 2.43-7 [1129 kB] Get:57 http://deb.debian.org/debian unstable/main arm64 libc6 arm64 2.43-7 [1459 kB] Get:58 http://deb.debian.org/debian unstable/main arm64 libc6-dev arm64 2.43-7 [1693 kB] Get:59 http://deb.debian.org/debian unstable/main arm64 grep arm64 3.12-1+b1 [440 kB] Get:60 http://deb.debian.org/debian unstable/main arm64 groff-base arm64 1.24.2-2 [1279 kB] Get:61 http://deb.debian.org/debian unstable/main arm64 gzip arm64 1.14-1 [141 kB] Get:62 http://deb.debian.org/debian unstable/main arm64 hdf5-helpers arm64 2.2.0+repack-5 [27.6 kB] Get:63 http://deb.debian.org/debian unstable/main arm64 hicolor-icon-theme all 0.18-2 [11.8 kB] Get:64 http://deb.debian.org/debian unstable/main arm64 hostname arm64 3.25+b1 [11.2 kB] Get:65 http://deb.debian.org/debian unstable/main arm64 init-system-helpers all 1.69+nmu3 [37.3 kB] Get:66 http://deb.debian.org/debian unstable/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:67 http://deb.debian.org/debian unstable/main arm64 krb5-multidev arm64 1.22.1-3 [125 kB] Get:68 http://deb.debian.org/debian unstable/main arm64 libblas-dev arm64 3.12.1-8 [139 kB] Get:69 http://deb.debian.org/debian unstable/main arm64 libblas3 arm64 3.12.1-8 [129 kB] Get:70 http://deb.debian.org/debian unstable/main arm64 libaec-dev arm64 1.1.7-1 [24.3 kB] Get:71 http://deb.debian.org/debian unstable/main arm64 libaec0 arm64 1.1.7-1 [21.4 kB] Get:72 http://deb.debian.org/debian unstable/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get:73 http://deb.debian.org/debian unstable/main arm64 libb2-1 arm64 0.98.1-1.1+b3 [17.4 kB] Get:74 http://deb.debian.org/debian unstable/main arm64 libbsd0 arm64 0.12.2-3 [130 kB] Get:75 http://deb.debian.org/debian unstable/main arm64 ibverbs-providers arm64 65.0-1.1 [369 kB] Get:76 http://deb.debian.org/debian unstable/main arm64 libamdhip64-6 arm64 6.4.3-5 [9338 kB] Get:77 http://deb.debian.org/debian unstable/main arm64 libamd-comgr3 arm64 7.0.2+dfsg-3 [12.8 MB] Get:78 http://deb.debian.org/debian unstable/main arm64 dh-strip-nondeterminism all 1.15.1-1 [6020 B] Get:79 http://deb.debian.org/debian unstable/main arm64 libamd3 arm64 1:7.14.1+dfsg-1 [47.0 kB] Get:80 http://deb.debian.org/debian unstable/main arm64 libcamd3 arm64 1:7.14.1+dfsg-1 [44.1 kB] Get:81 http://deb.debian.org/debian unstable/main arm64 bsdextrautils arm64 2.42.4-1 [99.1 kB] Get:82 http://deb.debian.org/debian unstable/main arm64 libblkid1 arm64 2.42.4-1 [166 kB] Get:83 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 libbrotli-dev arm64 1.2.0-4+b1 [308 kB] Get:84 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 libbrotli1 arm64 1.2.0-4+b1 [293 kB] Get:85 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 dh-python all 7.20261019 [115 kB] Get:86 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 cpp-16 arm64 16.2.0-3 [1272 B] Get:87 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 cpp-16-aarch64-linux-gnu arm64 16.2.0-3 [11.5 MB] Get:88 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 g++-16 arm64 16.2.0-3 [35.4 kB] Get:89 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 g++-16-aarch64-linux-gnu arm64 16.2.0-3 [12.7 MB] Get:90 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 gcc-16 arm64 16.2.0-3 [526 kB] Get:91 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 gcc-16-aarch64-linux-gnu arm64 16.2.0-3 [22.3 MB] Get:92 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 gcc-16-base arm64 16.2.0-3 [38.7 kB] Get:93 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 gfortran-16 arm64 16.2.0-3 [16.5 kB] Get:94 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 gfortran-16-aarch64-linux-gnu arm64 16.2.0-3 [12.2 MB] Get:95 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 libasan8 arm64 16.2.0-3 [2673 kB] Get:96 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 libatomic1 arm64 16.2.0-3 [9808 B] Get:97 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 imagemagick arm64 8:7.1.2.33+dfsg1-1 [27.4 kB] Get:98 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 imagemagick-7-common all 8:7.1.2.33+dfsg1-1 [75.3 kB] Get:99 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 imagemagick-7.q16 arm64 8:7.1.2.33+dfsg1-1 [734 kB] Get:100 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 libcap-ng0 arm64 0.9.6-1 [18.6 kB] Fetched 116 MB in 1s (118 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/base-passwd_3.6.8+b1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/libasound2-data_1.2.16.1-2_all.deb' dpkg-name: info: moved 'libaudit-common_1%3a4.2.1-1_all.deb' to '/srv/rebuilderd/tmp/tmp5pca2wm0/libaudit-common_4.2.1-1_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/krb5-multidev_1.22.1-3_arm64.deb' dpkg-name: info: moved 'automake_1%3a1.19-3_all.deb' to '/srv/rebuilderd/tmp/tmp5pca2wm0/automake_1.19-3_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/libasan8_16.2.0-3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/libavahi-client3_0.8-18_arm64.deb' dpkg-name: info: moved 'diffutils_1%3a3.12-1+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmp5pca2wm0/diffutils_3.12-1+b1_arm64.deb' dpkg-name: info: moved 'g++_4%3a16.1.0-3_arm64.deb' to '/srv/rebuilderd/tmp/tmp5pca2wm0/g++_16.1.0-3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/libblas-dev_3.12.1-8_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/gfortran-16_16.2.0-3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/libbinutils_2.47.50.20261021-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/libbsd0_0.12.2-3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/fonts-dejavu-core_2.37-9_all.deb' dpkg-name: info: moved 'gcc-aarch64-linux-gnu_4%3a16.1.0-3_arm64.deb' to '/srv/rebuilderd/tmp/tmp5pca2wm0/gcc-aarch64-linux-gnu_16.1.0-3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/libbrotli1_1.2.0-4+b1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/libbz2-1.0_1.0.8-6+b2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/dh-strip-nondeterminism_1.15.1-1_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/ibverbs-providers_65.0-1.1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/groff-base_1.24.2-2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/fonts-dejavu-mono_2.37-9_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/autotools-dev_20240727.1+nmu1_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/gcc-16_16.2.0-3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/libblas3_3.12.1-8_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/libamd-comgr3_7.0.2+dfsg-3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/build-essential_12.12_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/gcc-16-base_16.2.0-3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/cpp-16-aarch64-linux-gnu_16.2.0-3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/coreutils_9.10-1_arm64.deb' dpkg-name: info: moved 'imagemagick-7-common_8%3a7.1.2.33+dfsg1-1_all.deb' to '/srv/rebuilderd/tmp/tmp5pca2wm0/imagemagick-7-common_7.1.2.33+dfsg1-1_all.deb' dpkg-name: info: moved 'imagemagick-7.q16_8%3a7.1.2.33+dfsg1-1_arm64.deb' to '/srv/rebuilderd/tmp/tmp5pca2wm0/imagemagick-7.q16_7.1.2.33+dfsg1-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/hostname_3.25+b1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/libarchive-zip-perl_1.68-1_all.deb' dpkg-name: info: moved 'cpp-aarch64-linux-gnu_4%3a16.1.0-3_arm64.deb' to '/srv/rebuilderd/tmp/tmp5pca2wm0/cpp-aarch64-linux-gnu_16.1.0-3_arm64.deb' dpkg-name: info: moved 'libcamd3_1%3a7.14.1+dfsg-1_arm64.deb' to '/srv/rebuilderd/tmp/tmp5pca2wm0/libcamd3_7.14.1+dfsg-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/libarpack2t64_3.9.1-6+b2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/libavahi-common3_0.8-18_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/libacl1_2.4.0-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/grep_3.12-1+b1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/bzip2_1.0.8-6+b2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/debianutils_5.24_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/base-files_14.2_arm64.deb' dpkg-name: info: moved 'gcc_4%3a16.1.0-3_arm64.deb' to '/srv/rebuilderd/tmp/tmp5pca2wm0/gcc_16.1.0-3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/gcc-16-aarch64-linux-gnu_16.2.0-3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/libc6_2.43-7_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/libcap-ng0_0.9.6-1_arm64.deb' dpkg-name: info: moved 'file_1%3a5.47-4_arm64.deb' to '/srv/rebuilderd/tmp/tmp5pca2wm0/file_5.47-4_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/bash_5.3-4_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/binutils-aarch64-linux-gnu_2.47.50.20261021-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/intltool-debian_0.35.0+20060710.6_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/gettext_1.0-5_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/fontconfig-config_2.17.1-5_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/libaec0_1.1.7-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/init-system-helpers_1.69+nmu3_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/dwz_0.17-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/g++-16_16.2.0-3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/comerr-dev_2.1-1.47.4-1+b2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/libc-bin_2.43-7_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/libamdhip64-6_6.4.3-5_arm64.deb' dpkg-name: info: moved 'imagemagick_8%3a7.1.2.33+dfsg1-1_arm64.deb' to '/srv/rebuilderd/tmp/tmp5pca2wm0/imagemagick_7.1.2.33+dfsg1-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/gfortran-16-aarch64-linux-gnu_16.2.0-3_arm64.deb' dpkg-name: info: moved 'libattr1_1%3a2.6.0-1_arm64.deb' to '/srv/rebuilderd/tmp/tmp5pca2wm0/libattr1_2.6.0-1_arm64.deb' dpkg-name: info: moved 'libaudit1_1%3a4.2.1-1_arm64.deb' to '/srv/rebuilderd/tmp/tmp5pca2wm0/libaudit1_4.2.1-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/hdf5-helpers_2.2.0+repack-5_arm64.deb' dpkg-name: info: moved 'g++-aarch64-linux-gnu_4%3a16.1.0-3_arm64.deb' to '/srv/rebuilderd/tmp/tmp5pca2wm0/g++-aarch64-linux-gnu_16.1.0-3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/autoconf_2.73-2_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/libc-gconv-modules-extra_2.43-7_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/bsdextrautils_2.42.4-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/libcairo2_1.18.4-3+b1_arm64.deb' dpkg-name: info: moved 'libamd3_1%3a7.14.1+dfsg-1_arm64.deb' to '/srv/rebuilderd/tmp/tmp5pca2wm0/libamd3_7.14.1+dfsg-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/autopoint_1.0-5_all.deb' dpkg-name: info: moved 'cpp_4%3a16.1.0-3_arm64.deb' to '/srv/rebuilderd/tmp/tmp5pca2wm0/cpp_16.1.0-3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/dpkg-dev_1.23.11_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/libasound2t64_1.2.16.1-2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/fontconfig_2.17.1-5_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/libbrotli-dev_1.2.0-4+b1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/binutils_2.47.50.20261021-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/debconf_1.5.92_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/libblkid1_2.42.4-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/dh-autoreconf_23_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/gzip_1.14-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/binutils-common_2.47.50.20261021-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/findutils_4.11.0-3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/libb2-1_0.98.1-1.1+b3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/libc-dev-bin_2.43-7_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/cpp-16_16.2.0-3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/hicolor-icon-theme_0.18-2_all.deb' dpkg-name: info: moved 'gfortran-aarch64-linux-gnu_4%3a16.1.0-3_arm64.deb' to '/srv/rebuilderd/tmp/tmp5pca2wm0/gfortran-aarch64-linux-gnu_16.1.0-3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/debhelper_14.5_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/g++-16-aarch64-linux-gnu_16.2.0-3_arm64.deb' dpkg-name: info: moved 'gfortran_4%3a16.1.0-3_arm64.deb' to '/srv/rebuilderd/tmp/tmp5pca2wm0/gfortran_16.1.0-3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/bc_1.07.1-4+b2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/libaec-dev_1.1.7-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/dash_0.5.12-12+b1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/dpkg_1.23.11_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/gettext-base_1.0-5_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/libavahi-common-data_0.8-18_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/libatomic1_16.2.0-3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/libc6-dev_2.43-7_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pca2wm0/dh-python_7.20261019_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libctf-nobfd0 arm64 2.47.50.20261021-1 [155 kB] Get:2 http://deb.debian.org/debian unstable/main arm64 libctf0 arm64 2.47.50.20261021-1 [85.9 kB] Get:3 http://deb.debian.org/debian unstable/main arm64 libgprofng0 arm64 2.47.50.20261021-1 [685 kB] Get:4 http://deb.debian.org/debian unstable/main arm64 libdebconfclient0 arm64 0.283 [7736 B] Get:5 http://deb.debian.org/debian unstable/main arm64 libcups2t64 arm64 2.4.20-1 [235 kB] Get:6 http://deb.debian.org/debian unstable/main arm64 libcurl4-gnutls arm64 8.23.0-1 [394 kB] Get:7 http://deb.debian.org/debian unstable/main arm64 libcurl4-openssl-dev arm64 8.23.0-1 [544 kB] Get:8 http://deb.debian.org/debian unstable/main arm64 libcurl4t64 arm64 8.23.0-1 [399 kB] Get:9 http://deb.debian.org/debian unstable/main arm64 libdav1d7 arm64 1.5.4-1 [266 kB] Get:10 http://deb.debian.org/debian unstable/main arm64 libdb5.3t64 arm64 5.3.28+dfsg2-11+b1 [626 kB] Get:11 http://deb.debian.org/debian unstable/main arm64 libdbus-1-3 arm64 1.16.2-8 [165 kB] Get:12 http://deb.debian.org/debian unstable/main arm64 libdebhelper-perl all 14.5 [77.7 kB] Get:13 http://deb.debian.org/debian unstable/main arm64 libdouble-conversion3 arm64 3.4.0-1+b1 [36.8 kB] Get:14 http://deb.debian.org/debian unstable/main arm64 libdpkg-perl all 1.23.11 [650 kB] Get:15 http://deb.debian.org/debian unstable/main arm64 libduktape207 arm64 2.7.0-2+b3 [126 kB] Get:16 http://deb.debian.org/debian unstable/main arm64 libcom-err2 arm64 1.47.4-1+b2 [19.4 kB] Get:17 http://deb.debian.org/debian unstable/main arm64 libeigen3-dev all 5.0.1-3 [1192 kB] Get:18 http://deb.debian.org/debian unstable/main arm64 libelf1t64 arm64 0.196-1 [57.9 kB] Get:19 http://deb.debian.org/debian unstable/main arm64 libexpat1 arm64 2.9.0-1 [115 kB] Get:20 http://deb.debian.org/debian unstable/main arm64 libfftw3-bin arm64 3.3.11-1 [42.7 kB] Get:21 http://deb.debian.org/debian unstable/main arm64 libfftw3-dev arm64 3.3.11-1 [1123 kB] Get:22 http://deb.debian.org/debian unstable/main arm64 libfftw3-double3 arm64 3.3.11-1 [298 kB] Get:23 http://deb.debian.org/debian unstable/main arm64 libfftw3-long3 arm64 3.3.11-1 [475 kB] Get:24 http://deb.debian.org/debian unstable/main arm64 libfftw3-single3 arm64 3.3.11-1 [459 kB] Get:25 http://deb.debian.org/debian unstable/main arm64 libflac14 arm64 1.5.0+ds-5+b1 [152 kB] Get:26 http://deb.debian.org/debian unstable/main arm64 libfltk-gl1.4 arm64 1.4.4-4 [80.8 kB] Get:27 http://deb.debian.org/debian unstable/main arm64 libfltk1.4 arm64 1.4.4-4 [532 kB] Get:28 http://deb.debian.org/debian unstable/main arm64 libfontconfig1 arm64 2.17.1-5 [125 kB] Get:29 http://deb.debian.org/debian unstable/main arm64 libfreetype6 arm64 2.14.3+dfsg-3 [456 kB] Get:30 http://deb.debian.org/debian unstable/main arm64 libfribidi0 arm64 1.0.16-5+b1 [26.1 kB] Get:31 http://deb.debian.org/debian unstable/main arm64 libfuse3-4 arm64 3.18.3-1 [98.4 kB] Get:32 http://deb.debian.org/debian unstable/main arm64 libgdbm-compat4t64 arm64 1.26-1+b2 [52.0 kB] Get:33 http://deb.debian.org/debian unstable/main arm64 libgdbm6t64 arm64 1.26-1+b2 [76.1 kB] Get:34 http://deb.debian.org/debian unstable/main arm64 libgl2ps1.4 arm64 1.4.2+dfsg1-4+b1 [39.7 kB] Get:35 http://deb.debian.org/debian unstable/main arm64 libglib2.0-0t64 arm64 2.90.1-2 [1439 kB] Get:36 http://deb.debian.org/debian unstable/main arm64 libglpk40 arm64 5.0-3 [335 kB] Get:37 http://deb.debian.org/debian unstable/main arm64 libgmp-dev arm64 2:6.3.0+dfsg-5+b2 [632 kB] Get:38 http://deb.debian.org/debian unstable/main arm64 libgmp10 arm64 2:6.3.0+dfsg-5+b2 [543 kB] Get:39 http://deb.debian.org/debian unstable/main arm64 libgmpxx4ldbl arm64 2:6.3.0+dfsg-5+b2 [328 kB] Get:40 http://deb.debian.org/debian unstable/main arm64 libgnutls-dane0t64 arm64 3.8.13-1 [493 kB] Get:41 http://deb.debian.org/debian unstable/main arm64 libgnutls28-dev arm64 3.8.13-1 [1456 kB] Get:42 http://deb.debian.org/debian unstable/main arm64 libgnutls30t64 arm64 3.8.13-1 [1434 kB] Get:43 http://deb.debian.org/debian unstable/main arm64 libgraphicsmagick++-q16-12t64 arm64 1.4+really1.3.49-1 [127 kB] Get:44 http://deb.debian.org/debian unstable/main arm64 libgraphicsmagick-q16-3t64 arm64 1.4+really1.3.49-1 [1113 kB] Get:45 http://deb.debian.org/debian unstable/main arm64 libgraphite2-3 arm64 1.3.15-2 [69.6 kB] Get:46 http://deb.debian.org/debian unstable/main arm64 libgsl-dev arm64 2.8+dfsg-6+b1 [1110 kB] Get:47 http://deb.debian.org/debian unstable/main arm64 libgsl28 arm64 2.8+dfsg-6+b1 [870 kB] Get:48 http://deb.debian.org/debian unstable/main arm64 libgslcblas0 arm64 2.8+dfsg-6+b1 [89.1 kB] Get:49 http://deb.debian.org/debian unstable/main arm64 libharfbuzz0b arm64 12.3.2-2+b2 [471 kB] Get:50 http://deb.debian.org/debian unstable/main arm64 libhdf5-320 arm64 2.2.0+repack-5 [1654 kB] Get:51 http://deb.debian.org/debian unstable/main arm64 libhdf5-cpp-320 arm64 2.2.0+repack-5 [126 kB] Get:52 http://deb.debian.org/debian unstable/main arm64 libhdf5-dev arm64 2.2.0+repack-5 [3927 kB] Get:53 http://deb.debian.org/debian unstable/main arm64 libhdf5-fortran-320 arm64 2.2.0+repack-5 [116 kB] Get:54 http://deb.debian.org/debian unstable/main arm64 libhdf5-hl-320 arm64 2.2.0+repack-5 [71.7 kB] Get:55 http://deb.debian.org/debian unstable/main arm64 libhdf5-hl-cpp-320 arm64 2.2.0+repack-5 [27.5 kB] Get:56 http://deb.debian.org/debian unstable/main arm64 libgssapi-krb5-2 arm64 1.22.1-3 [125 kB] Get:57 http://deb.debian.org/debian unstable/main arm64 libgssrpc4t64 arm64 1.22.1-3 [54.7 kB] Get:58 http://deb.debian.org/debian unstable/main arm64 libdatrie1 arm64 0.2.14-2 [38.4 kB] Get:59 http://deb.debian.org/debian unstable/main arm64 libde265-0 arm64 1.1.3-1+b1 [160 kB] Get:60 http://deb.debian.org/debian unstable/main arm64 libdecor-0-0 arm64 0.2.5-1+b1 [15.5 kB] Get:61 http://deb.debian.org/debian unstable/main arm64 libdeflate-dev arm64 1.25-1 [50.3 kB] Get:62 http://deb.debian.org/debian unstable/main arm64 libdeflate0 arm64 1.25-1 [41.4 kB] Get:63 http://deb.debian.org/debian unstable/main arm64 libdrm-amdgpu1 arm64 2.4.134-3 [22.1 kB] Get:64 http://deb.debian.org/debian unstable/main arm64 libdrm-common all 2.4.134-3 [7860 B] Get:65 http://deb.debian.org/debian unstable/main arm64 libdrm2 arm64 2.4.134-3 [37.1 kB] Get:66 http://deb.debian.org/debian unstable/main arm64 libedit2 arm64 3.1-20260512-1 [88.3 kB] Get:67 http://deb.debian.org/debian unstable/main arm64 libesmtp6 arm64 1.1.0-3.2+b2 [56.6 kB] Get:68 http://deb.debian.org/debian unstable/main arm64 libevdev2 arm64 1.14.0+dfsg-1 [30.5 kB] Get:69 http://deb.debian.org/debian unstable/main arm64 libevent-2.1-7t64 arm64 2.1.13-stable-1 [169 kB] Get:70 http://deb.debian.org/debian unstable/main arm64 libevent-core-2.1-7t64 arm64 2.1.13-stable-1 [126 kB] Get:71 http://deb.debian.org/debian unstable/main arm64 libevent-pthreads-2.1-7t64 arm64 2.1.13-stable-1 [54.0 kB] Get:72 http://deb.debian.org/debian unstable/main arm64 libfabric1 arm64 2.1.0-1.1+b2 [542 kB] Get:73 http://deb.debian.org/debian unstable/main arm64 libffi8 arm64 3.8.0-2 [25.9 kB] Get:74 http://deb.debian.org/debian unstable/main arm64 libglu1-mesa arm64 9.0.2-1.1+b4 [162 kB] Get:75 http://deb.debian.org/debian unstable/main arm64 libglu1-mesa-dev arm64 9.0.2-1.1+b4 [203 kB] Get:76 http://deb.debian.org/debian unstable/main arm64 libegl-dev arm64 1.7.0-3+b1 [18.7 kB] Get:77 http://deb.debian.org/debian unstable/main arm64 libegl1 arm64 1.7.0-3+b1 [33.2 kB] Get:78 http://deb.debian.org/debian unstable/main arm64 libgl-dev arm64 1.7.0-3+b1 [99.8 kB] Get:79 http://deb.debian.org/debian unstable/main arm64 libgl1 arm64 1.7.0-3+b1 [88.7 kB] Get:80 http://deb.debian.org/debian unstable/main arm64 libglvnd0 arm64 1.7.0-3+b1 [40.9 kB] Get:81 http://deb.debian.org/debian unstable/main arm64 libglx-dev arm64 1.7.0-3+b1 [15.0 kB] Get:82 http://deb.debian.org/debian unstable/main arm64 libglx0 arm64 1.7.0-3+b1 [30.6 kB] Get:83 http://deb.debian.org/debian unstable/main arm64 libgudev-1.0-0 arm64 238-7+b2 [13.9 kB] Get:84 http://deb.debian.org/debian unstable/main arm64 libcrypt1 arm64 1:4.5.2+20251210-1 [92.0 kB] Get:85 http://deb.debian.org/debian unstable/main arm64 libclang-common-21-dev arm64 1:21.1.8-14 [769 kB] Get:86 http://deb.debian.org/debian unstable/main arm64 libegl-mesa0 arm64 26.2.5-1 [118 kB] Get:87 http://deb.debian.org/debian unstable/main arm64 libgbm1 arm64 26.2.5-1 [47.6 kB] Get:88 http://deb.debian.org/debian unstable/main arm64 libgl1-mesa-dri arm64 26.2.5-1 [36.8 kB] Get:89 http://deb.debian.org/debian unstable/main arm64 libglx-mesa0 arm64 26.2.5-1 [112 kB] Get:90 http://deb.debian.org/debian unstable/main arm64 libfile-stripnondeterminism-perl all 1.15.1-1 [17.1 kB] Get:91 http://deb.debian.org/debian unstable/main arm64 libccolamd3 arm64 1:7.14.1+dfsg-1 [46.3 kB] Get:92 http://deb.debian.org/debian unstable/main arm64 libcholmod5 arm64 1:7.14.1+dfsg-1 [545 kB] Get:93 http://deb.debian.org/debian unstable/main arm64 libcolamd3 arm64 1:7.14.1+dfsg-1 [41.1 kB] Get:94 http://deb.debian.org/debian unstable/main arm64 libcxsparse4 arm64 1:7.14.1+dfsg-1 [85.1 kB] Get:95 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 libcc1-0 arm64 16.2.0-3 [43.6 kB] Get:96 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 libgcc-16-dev arm64 16.2.0-3 [2390 kB] Get:97 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 libgcc-s1 arm64 16.2.0-3 [53.2 kB] Get:98 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 libgfortran-16-dev arm64 16.2.0-3 [427 kB] Get:99 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 libgfortran5 arm64 16.2.0-3 [367 kB] Get:100 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 libgomp1 arm64 16.2.0-3 [132 kB] Fetched 34.0 MB in 0s (89.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libgomp1_16.2.0-3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libglpk40_5.0-3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libgssapi-krb5-2_1.22.1-3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libflac14_1.5.0+ds-5+b1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libglib2.0-0t64_2.90.1-2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libevdev2_1.14.0+dfsg-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libgdbm6t64_1.26-1+b2_arm64.deb' dpkg-name: info: moved 'libcrypt1_1%3a4.5.2+20251210-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpqbasjpg6/libcrypt1_4.5.2+20251210-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libgcc-16-dev_16.2.0-3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libevent-core-2.1-7t64_2.1.13-stable-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libdrm-common_2.4.134-3_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libhdf5-hl-320_2.2.0+repack-5_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libduktape207_2.7.0-2+b3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libdouble-conversion3_3.4.0-1+b1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libgnutls30t64_3.8.13-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libdb5.3t64_5.3.28+dfsg2-11+b1_arm64.deb' dpkg-name: info: moved 'libcolamd3_1%3a7.14.1+dfsg-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpqbasjpg6/libcolamd3_7.14.1+dfsg-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libgprofng0_2.47.50.20261021-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libgl1-mesa-dri_26.2.5-1_arm64.deb' dpkg-name: info: moved 'libcxsparse4_1%3a7.14.1+dfsg-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpqbasjpg6/libcxsparse4_7.14.1+dfsg-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libgnutls28-dev_3.8.13-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libhdf5-hl-cpp-320_2.2.0+repack-5_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libctf0_2.47.50.20261021-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libelf1t64_0.196-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libesmtp6_1.1.0-3.2+b2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libcurl4-openssl-dev_8.23.0-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libgraphicsmagick-q16-3t64_1.4+really1.3.49-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libctf-nobfd0_2.47.50.20261021-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libeigen3-dev_5.0.1-3_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libfltk-gl1.4_1.4.4-4_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libhdf5-cpp-320_2.2.0+repack-5_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libfribidi0_1.0.16-5+b1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libfftw3-double3_3.3.11-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libgfortran5_16.2.0-3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libgl1_1.7.0-3+b1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libfftw3-long3_3.3.11-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libcurl4t64_8.23.0-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libcurl4-gnutls_8.23.0-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libexpat1_2.9.0-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libdebhelper-perl_14.5_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libglx-mesa0_26.2.5-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libffi8_3.8.0-2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libegl-mesa0_26.2.5-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libdebconfclient0_0.283_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libgraphicsmagick++-q16-12t64_1.4+really1.3.49-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libegl-dev_1.7.0-3+b1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libgsl-dev_2.8+dfsg-6+b1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libcom-err2_1.47.4-1+b2_arm64.deb' dpkg-name: info: moved 'libccolamd3_1%3a7.14.1+dfsg-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpqbasjpg6/libccolamd3_7.14.1+dfsg-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libglu1-mesa_9.0.2-1.1+b4_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libgfortran-16-dev_16.2.0-3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libfabric1_2.1.0-1.1+b2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libegl1_1.7.0-3+b1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libhdf5-dev_2.2.0+repack-5_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libdeflate-dev_1.25-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libglx-dev_1.7.0-3+b1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libglu1-mesa-dev_9.0.2-1.1+b4_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libglx0_1.7.0-3+b1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libde265-0_1.1.3-1+b1_arm64.deb' dpkg-name: info: moved 'libgmp-dev_2%3a6.3.0+dfsg-5+b2_arm64.deb' to '/srv/rebuilderd/tmp/tmpqbasjpg6/libgmp-dev_6.3.0+dfsg-5+b2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libgl2ps1.4_1.4.2+dfsg1-4+b1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libharfbuzz0b_12.3.2-2+b2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libgbm1_26.2.5-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libcc1-0_16.2.0-3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libfftw3-dev_3.3.11-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libfltk1.4_1.4.4-4_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libevent-pthreads-2.1-7t64_2.1.13-stable-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libfftw3-bin_3.3.11-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libcups2t64_2.4.20-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libdeflate0_1.25-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libedit2_3.1-20260512-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libevent-2.1-7t64_2.1.13-stable-1_arm64.deb' dpkg-name: info: moved 'libcholmod5_1%3a7.14.1+dfsg-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpqbasjpg6/libcholmod5_7.14.1+dfsg-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libfreetype6_2.14.3+dfsg-3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libfontconfig1_2.17.1-5_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libglvnd0_1.7.0-3+b1_arm64.deb' dpkg-name: info: moved 'libclang-common-21-dev_1%3a21.1.8-14_arm64.deb' to '/srv/rebuilderd/tmp/tmpqbasjpg6/libclang-common-21-dev_21.1.8-14_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libgslcblas0_2.8+dfsg-6+b1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libgcc-s1_16.2.0-3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libgudev-1.0-0_238-7+b2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libdpkg-perl_1.23.11_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libfuse3-4_3.18.3-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libfftw3-single3_3.3.11-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libhdf5-fortran-320_2.2.0+repack-5_arm64.deb' dpkg-name: info: moved 'libgmp10_2%3a6.3.0+dfsg-5+b2_arm64.deb' to '/srv/rebuilderd/tmp/tmpqbasjpg6/libgmp10_6.3.0+dfsg-5+b2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libfile-stripnondeterminism-perl_1.15.1-1_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libdrm-amdgpu1_2.4.134-3_arm64.deb' dpkg-name: info: moved 'libgmpxx4ldbl_2%3a6.3.0+dfsg-5+b2_arm64.deb' to '/srv/rebuilderd/tmp/tmpqbasjpg6/libgmpxx4ldbl_6.3.0+dfsg-5+b2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libdecor-0-0_0.2.5-1+b1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libdbus-1-3_1.16.2-8_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libgdbm-compat4t64_1.26-1+b2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libgnutls-dane0t64_3.8.13-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libgsl28_2.8+dfsg-6+b1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libdav1d7_1.5.4-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libgraphite2-3_1.3.15-2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libhdf5-320_2.2.0+repack-5_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libdrm2_2.4.134-3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libdatrie1_0.2.14-2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libgl-dev_1.7.0-3+b1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqbasjpg6/libgssrpc4t64_1.22.1-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libmagic-mgc arm64 1:5.47-4 [345 kB] Get:2 http://deb.debian.org/debian unstable/main arm64 libmagic1t64 arm64 1:5.47-4 [104 kB] Get:3 http://deb.debian.org/debian unstable/main arm64 libhdf5-hl-fortran-320 arm64 2.2.0+repack-5 [47.2 kB] Get:4 http://deb.debian.org/debian unstable/main arm64 libhdf5-openmpi-320 arm64 2.2.0+repack-5 [1725 kB] Get:5 http://deb.debian.org/debian unstable/main arm64 libhwy1t64 arm64 1.3.0-5.1 [421 kB] Get:6 http://deb.debian.org/debian unstable/main arm64 libhwloc-plugins arm64 2.15.0-2 [16.1 kB] Get:7 http://deb.debian.org/debian unstable/main arm64 libhwloc15 arm64 2.15.0-2 [142 kB] Get:8 http://deb.debian.org/debian unstable/main arm64 libicu78 arm64 78.3-2 [9803 kB] Get:9 http://deb.debian.org/debian unstable/main arm64 libisl23 arm64 0.28-1 [602 kB] Get:10 http://deb.debian.org/debian unstable/main arm64 libjack-jackd2-0 arm64 1.9.22~dfsg-6 [259 kB] Get:11 http://deb.debian.org/debian unstable/main arm64 libjansson4 arm64 2.15.1-1 [62.0 kB] Get:12 http://deb.debian.org/debian unstable/main arm64 libjbig-dev arm64 2.1-6.1+b3 [30.1 kB] Get:13 http://deb.debian.org/debian unstable/main arm64 libjbig0 arm64 2.1-6.1+b3 [30.2 kB] Get:14 http://deb.debian.org/debian unstable/main arm64 libjxl0.11 arm64 0.11.2-5.1 [843 kB] Get:15 http://deb.debian.org/debian unstable/main arm64 libkeyutils1 arm64 1.6.3-6+b2 [9444 B] Get:16 http://deb.debian.org/debian unstable/main arm64 libk5crypto3 arm64 1.22.1-3 [74.7 kB] Get:17 http://deb.debian.org/debian unstable/main arm64 libkadm5clnt-mit12 arm64 1.22.1-3 [38.6 kB] Get:18 http://deb.debian.org/debian unstable/main arm64 libkadm5srv-mit12 arm64 1.22.1-3 [51.6 kB] Get:19 http://deb.debian.org/debian unstable/main arm64 libkdb5-10t64 arm64 1.22.1-3 [39.8 kB] Get:20 http://deb.debian.org/debian unstable/main arm64 libkrb5-3 arm64 1.22.1-3 [314 kB] Get:21 http://deb.debian.org/debian unstable/main arm64 libkrb5-dev arm64 1.22.1-3 [14.0 kB] Get:22 http://deb.debian.org/debian unstable/main arm64 libkrb5support0 arm64 1.22.1-3 [30.2 kB] Get:23 http://deb.debian.org/debian unstable/main arm64 libmp3lame0 arm64 4.0-1 [282 kB] Get:24 http://deb.debian.org/debian unstable/main arm64 liblapack-dev arm64 3.12.1-8 [3759 kB] Get:25 http://deb.debian.org/debian unstable/main arm64 liblapack3 arm64 3.12.1-8 [1818 kB] Get:26 http://deb.debian.org/debian unstable/main arm64 liblcms2-2 arm64 2.19.1-1 [153 kB] Get:27 http://deb.debian.org/debian unstable/main arm64 liblerc-dev arm64 4.2.0+ds-1 [165 kB] Get:28 http://deb.debian.org/debian unstable/main arm64 liblerc4 arm64 4.2.0+ds-1 [152 kB] Get:29 http://deb.debian.org/debian unstable/main arm64 libopengl-dev arm64 1.7.0-3+b1 [4572 B] Get:30 http://deb.debian.org/debian unstable/main arm64 libopengl0 arm64 1.7.0-3+b1 [31.2 kB] Get:31 http://deb.debian.org/debian unstable/main arm64 libheif-plugin-dav1d arm64 1.23.6-2 [20.4 kB] Get:32 http://deb.debian.org/debian unstable/main arm64 libheif-plugin-libde265 arm64 1.23.6-2 [18.6 kB] Get:33 http://deb.debian.org/debian unstable/main arm64 libheif1 arm64 1.23.6-2 [689 kB] Get:34 http://deb.debian.org/debian unstable/main arm64 libice6 arm64 2:1.1.1-1+b2 [63.1 kB] Get:35 http://deb.debian.org/debian unstable/main arm64 libidn2-0 arm64 2.3.8-5 [107 kB] Get:36 http://deb.debian.org/debian unstable/main arm64 libidn2-dev arm64 2.3.8-5 [100 kB] Get:37 http://deb.debian.org/debian unstable/main arm64 libinput-bin arm64 1.31.3-1 [28.0 kB] Get:38 http://deb.debian.org/debian unstable/main arm64 libinput10 arm64 1.31.3-1 [142 kB] Get:39 http://deb.debian.org/debian unstable/main arm64 libintl-perl all 1.37-1 [696 kB] Get:40 http://deb.debian.org/debian unstable/main arm64 libjpeg-dev arm64 1:3.1.3-4 [78.8 kB] Get:41 http://deb.debian.org/debian unstable/main arm64 libjpeg62-turbo arm64 1:3.1.3-4 [217 kB] Get:42 http://deb.debian.org/debian unstable/main arm64 libjpeg62-turbo-dev arm64 1:3.1.3-4 [358 kB] Get:43 http://deb.debian.org/debian unstable/main arm64 liblqr-1-0 arm64 0.4.2-2.2+b1 [27.5 kB] Get:44 http://deb.debian.org/debian unstable/main arm64 libmd0 arm64 1.3.0-1 [40.1 kB] Get:45 http://deb.debian.org/debian unstable/main arm64 libnl-3-200 arm64 3.12.0-2+b1 [58.8 kB] Get:46 http://deb.debian.org/debian unstable/main arm64 libnl-route-3-200 arm64 3.12.0-2+b1 [181 kB] Get:47 http://deb.debian.org/debian unstable/main arm64 libogg0 arm64 1.3.6-2+b1 [23.4 kB] Get:48 http://deb.debian.org/debian unstable/main arm64 libpciaccess0 arm64 0.19-2 [17.3 kB] Get:49 http://deb.debian.org/debian unstable/main arm64 libltdl7 arm64 2.6.2-3 [426 kB] Get:50 http://deb.debian.org/debian unstable/main arm64 libllvm21 arm64 1:21.1.8-14 [25.4 MB] Get:51 http://deb.debian.org/debian unstable/main arm64 libllvm22 arm64 1:22.1.8-3 [26.5 MB] Get:52 http://deb.debian.org/debian unstable/main arm64 libmd4c0 arm64 0.5.3-1 [46.3 kB] Get:53 http://deb.debian.org/debian unstable/main arm64 libmpc3 arm64 1.3.1-3 [49.3 kB] Get:54 http://deb.debian.org/debian unstable/main arm64 libmpfr6 arm64 4.2.2-3 [691 kB] Get:55 http://deb.debian.org/debian unstable/main arm64 libmpg123-0t64 arm64 1.33.7-1 [143 kB] Get:56 http://deb.debian.org/debian unstable/main arm64 libmtdev1t64 arm64 1.1.7-1+b2 [22.7 kB] Get:57 http://deb.debian.org/debian unstable/main arm64 libncurses-dev arm64 6.6+20260608-2 [344 kB] Get:58 http://deb.debian.org/debian unstable/main arm64 libncurses6 arm64 6.6+20260608-2 [97.2 kB] Get:59 http://deb.debian.org/debian unstable/main arm64 libncursesw6 arm64 6.6+20260608-2 [125 kB] Get:60 http://deb.debian.org/debian unstable/main arm64 libhogweed6t64 arm64 3.10.2-1+b1 [330 kB] Get:61 http://deb.debian.org/debian unstable/main arm64 libnettle8t64 arm64 3.10.2-1+b1 [304 kB] Get:62 http://deb.debian.org/debian unstable/main arm64 libnghttp2-14 arm64 1.70.0-1 [87.9 kB] Get:63 http://deb.debian.org/debian unstable/main arm64 libnghttp2-dev arm64 1.70.0-1 [128 kB] Get:64 http://deb.debian.org/debian unstable/main arm64 libnghttp3-9 arm64 1.17.0-1 [63.0 kB] Get:65 http://deb.debian.org/debian unstable/main arm64 libnghttp3-dev arm64 1.17.0-1 [92.5 kB] Get:66 http://deb.debian.org/debian unstable/main arm64 libngtcp2-16 arm64 1.24.0-1 [129 kB] Get:67 http://deb.debian.org/debian unstable/main arm64 libngtcp2-crypto-gnutls8 arm64 1.24.0-1 [22.5 kB] Get:68 http://deb.debian.org/debian unstable/main arm64 libngtcp2-crypto-ossl-dev arm64 1.24.0-1 [26.8 kB] Get:69 http://deb.debian.org/debian unstable/main arm64 libngtcp2-crypto-ossl0 arm64 1.24.0-1 [24.7 kB] Get:70 http://deb.debian.org/debian unstable/main arm64 libngtcp2-dev arm64 1.24.0-1 [194 kB] Get:71 http://deb.debian.org/debian unstable/main arm64 libnuma1 arm64 2.0.19-1+b2 [21.5 kB] Get:72 http://deb.debian.org/debian unstable/main arm64 libopenjp2-7 arm64 2.5.4-1.1 [187 kB] Get:73 http://deb.debian.org/debian unstable/main arm64 libldap-dev arm64 2.6.14+dfsg-2 [298 kB] Get:74 http://deb.debian.org/debian unstable/main arm64 libldap2 arm64 2.6.14+dfsg-2 [173 kB] Get:75 http://deb.debian.org/debian unstable/main arm64 libopenmpi40 arm64 6.0.0~rc2-2 [2355 kB] Get:76 http://deb.debian.org/debian unstable/main arm64 libopus0 arm64 1.6.1-1+b1 [3443 kB] Get:77 http://deb.debian.org/debian unstable/main arm64 libp11-kit-dev arm64 0.26.5-1 [226 kB] Get:78 http://deb.debian.org/debian unstable/main arm64 libp11-kit0 arm64 0.26.5-1 [440 kB] Get:79 http://deb.debian.org/debian unstable/main arm64 libpam-modules arm64 1.7.0-8 [161 kB] Get:80 http://deb.debian.org/debian unstable/main arm64 libpam-modules-bin arm64 1.7.0-8 [44.7 kB] Get:81 http://deb.debian.org/debian unstable/main arm64 libpam-runtime all 1.7.0-8 [246 kB] Get:82 http://deb.debian.org/debian unstable/main arm64 libpam0g arm64 1.7.0-8 [65.1 kB] Get:83 http://deb.debian.org/debian unstable/main arm64 libpango-1.0-0 arm64 1.58.2-1 [212 kB] Get:84 http://deb.debian.org/debian unstable/main arm64 libpangocairo-1.0-0 arm64 1.58.2-1 [31.8 kB] Get:85 http://deb.debian.org/debian unstable/main arm64 libpangoft2-1.0-0 arm64 1.58.2-1 [49.9 kB] Get:86 http://deb.debian.org/debian unstable/main arm64 libpcre2-16-0 arm64 10.48-3.1 [254 kB] Get:87 http://deb.debian.org/debian unstable/main arm64 libpcre2-8-0 arm64 10.48-3.1 [267 kB] Get:88 http://deb.debian.org/debian unstable/main arm64 libperl5.42 arm64 5.42.3-1 [4048 kB] Get:89 http://deb.debian.org/debian unstable/main arm64 libibmad5 arm64 65.0-1.1 [41.1 kB] Get:90 http://deb.debian.org/debian unstable/main arm64 libibumad3 arm64 65.0-1.1 [27.9 kB] Get:91 http://deb.debian.org/debian unstable/main arm64 libibverbs1 arm64 65.0-1.1 [62.3 kB] Get:92 http://deb.debian.org/debian unstable/main arm64 libhsa-runtime64-1 arm64 6.4.3+dfsg-5 [385 kB] Get:93 http://deb.debian.org/debian unstable/main arm64 libmount1 arm64 2.42.4-1 [202 kB] Get:94 http://deb.debian.org/debian unstable/main arm64 liblzma-dev arm64 5.8.4-1 [380 kB] Get:95 http://deb.debian.org/debian unstable/main arm64 liblzma5 arm64 5.8.4-1 [342 kB] Get:96 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 libhwasan0 arm64 16.2.0-3 [1505 kB] Get:97 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 libitm1 arm64 16.2.0-3 [24.2 kB] Get:98 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 liblsan0 arm64 16.2.0-3 [1212 kB] Get:99 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 libmagickcore-7.q16-10 arm64 8:7.1.2.33+dfsg1-1 [1678 kB] Get:100 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 libmagickwand-7.q16-10 arm64 8:7.1.2.33+dfsg1-1 [284 kB] Fetched 98.2 MB in 1s (96.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libngtcp2-crypto-gnutls8_1.24.0-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libisl23_0.28-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libopengl0_1.7.0-3+b1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libp11-kit-dev_0.26.5-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libldap-dev_2.6.14+dfsg-2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libhdf5-openmpi-320_2.2.0+repack-5_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libpcre2-8-0_10.48-3.1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/liblerc4_4.2.0+ds-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libmd4c0_0.5.3-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libheif1_1.23.6-2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libnuma1_2.0.19-1+b2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/liblcms2-2_2.19.1-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libnl-route-3-200_3.12.0-2+b1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libpam-runtime_1.7.0-8_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libpam-modules-bin_1.7.0-8_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libjbig-dev_2.1-6.1+b3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/liblsan0_16.2.0-3_arm64.deb' dpkg-name: info: moved 'libjpeg62-turbo-dev_1%3a3.1.3-4_arm64.deb' to '/srv/rebuilderd/tmp/tmpws6vu603/libjpeg62-turbo-dev_3.1.3-4_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libpangoft2-1.0-0_1.58.2-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libmpfr6_4.2.2-3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libhwy1t64_1.3.0-5.1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libperl5.42_5.42.3-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libhdf5-hl-fortran-320_2.2.0+repack-5_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libnl-3-200_3.12.0-2+b1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libhwloc15_2.15.0-2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libjxl0.11_0.11.2-5.1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libncurses-dev_6.6+20260608-2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libinput-bin_1.31.3-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libopenjp2-7_2.5.4-1.1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libpcre2-16-0_10.48-3.1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libibverbs1_65.0-1.1_arm64.deb' dpkg-name: info: moved 'libjpeg-dev_1%3a3.1.3-4_arm64.deb' to '/srv/rebuilderd/tmp/tmpws6vu603/libjpeg-dev_3.1.3-4_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libmount1_2.42.4-1_arm64.deb' dpkg-name: info: moved 'libmagickwand-7.q16-10_8%3a7.1.2.33+dfsg1-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpws6vu603/libmagickwand-7.q16-10_7.1.2.33+dfsg1-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/liblqr-1-0_0.4.2-2.2+b1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libncurses6_6.6+20260608-2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libpango-1.0-0_1.58.2-1_arm64.deb' dpkg-name: info: moved 'libllvm22_1%3a22.1.8-3_arm64.deb' to '/srv/rebuilderd/tmp/tmpws6vu603/libllvm22_22.1.8-3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libkrb5support0_1.22.1-3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libogg0_1.3.6-2+b1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libopengl-dev_1.7.0-3+b1_arm64.deb' dpkg-name: info: moved 'libmagic1t64_1%3a5.47-4_arm64.deb' to '/srv/rebuilderd/tmp/tmpws6vu603/libmagic1t64_5.47-4_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libnghttp3-9_1.17.0-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libldap2_2.6.14+dfsg-2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libkadm5srv-mit12_1.22.1-3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libheif-plugin-dav1d_1.23.6-2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libjbig0_2.1-6.1+b3_arm64.deb' dpkg-name: info: moved 'libice6_2%3a1.1.1-1+b2_arm64.deb' to '/srv/rebuilderd/tmp/tmpws6vu603/libice6_1.1.1-1+b2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libhwloc-plugins_2.15.0-2_arm64.deb' dpkg-name: info: moved 'libmagic-mgc_1%3a5.47-4_arm64.deb' to '/srv/rebuilderd/tmp/tmpws6vu603/libmagic-mgc_5.47-4_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libngtcp2-crypto-ossl0_1.24.0-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libinput10_1.31.3-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libmpc3_1.3.1-3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libngtcp2-16_1.24.0-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libjack-jackd2-0_1.9.22~dfsg-6_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libhogweed6t64_3.10.2-1+b1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libheif-plugin-libde265_1.23.6-2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libmp3lame0_4.0-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libmpg123-0t64_1.33.7-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libpciaccess0_0.19-2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libidn2-dev_2.3.8-5_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libibumad3_65.0-1.1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libmd0_1.3.0-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/liblzma-dev_5.8.4-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libpangocairo-1.0-0_1.58.2-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libkrb5-dev_1.22.1-3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libngtcp2-crypto-ossl-dev_1.24.0-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/liblzma5_5.8.4-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libjansson4_2.15.1-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/liblapack-dev_3.12.1-8_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libopenmpi40_6.0.0~rc2-2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libnghttp2-14_1.70.0-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libhsa-runtime64-1_6.4.3+dfsg-5_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libpam-modules_1.7.0-8_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libpam0g_1.7.0-8_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libibmad5_65.0-1.1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/liblerc-dev_4.2.0+ds-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libidn2-0_2.3.8-5_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libngtcp2-dev_1.24.0-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libk5crypto3_1.22.1-3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libncursesw6_6.6+20260608-2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libopus0_1.6.1-1+b1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libp11-kit0_0.26.5-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libhwasan0_16.2.0-3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libintl-perl_1.37-1_all.deb' dpkg-name: info: moved 'libllvm21_1%3a21.1.8-14_arm64.deb' to '/srv/rebuilderd/tmp/tmpws6vu603/libllvm21_21.1.8-14_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libkrb5-3_1.22.1-3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libltdl7_2.6.2-3_arm64.deb' dpkg-name: info: moved 'libjpeg62-turbo_1%3a3.1.3-4_arm64.deb' to '/srv/rebuilderd/tmp/tmpws6vu603/libjpeg62-turbo_3.1.3-4_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libkadm5clnt-mit12_1.22.1-3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libkeyutils1_1.6.3-6+b2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libkdb5-10t64_1.22.1-3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libmtdev1t64_1.1.7-1+b2_arm64.deb' dpkg-name: info: moved 'libmagickcore-7.q16-10_8%3a7.1.2.33+dfsg1-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpws6vu603/libmagickcore-7.q16-10_7.1.2.33+dfsg1-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libnghttp2-dev_1.70.0-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libitm1_16.2.0-3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libicu78_78.3-2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libnghttp3-dev_1.17.0-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/libnettle8t64_3.10.2-1+b1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpws6vu603/liblapack3_3.12.1-8_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libsframe3 arm64 2.47.50.20261021-1 [85.7 kB] Get:2 http://deb.debian.org/debian unstable/main arm64 libsasl2-2 arm64 2.1.28+dfsg1-12 [52.4 kB] Get:3 http://deb.debian.org/debian unstable/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg1-12 [17.3 kB] Get:4 http://deb.debian.org/debian unstable/main arm64 libsz2 arm64 1.1.7-1 [17.8 kB] Get:5 http://deb.debian.org/debian unstable/main arm64 libpipeline1 arm64 1.5.8-3 [47.2 kB] Get:6 http://deb.debian.org/debian unstable/main arm64 libpng16-16t64 arm64 1.6.59-1 [276 kB] Get:7 http://deb.debian.org/debian unstable/main arm64 libproxy1v5 arm64 0.5.12-3 [23.4 kB] Get:8 http://deb.debian.org/debian unstable/main arm64 libpsl-dev arm64 0.23.3-1 [30.1 kB] Get:9 http://deb.debian.org/debian unstable/main arm64 libpsl5t64 arm64 0.23.3-1 [61.0 kB] Get:10 http://deb.debian.org/debian unstable/main arm64 libraw25 arm64 0.22.1-1 [393 kB] Get:11 http://deb.debian.org/debian unstable/main arm64 libsamplerate0 arm64 0.2.2-4+b3 [947 kB] Get:12 http://deb.debian.org/debian unstable/main arm64 libsm6 arm64 2:1.2.6-1+b2 [36.8 kB] Get:13 http://deb.debian.org/debian unstable/main arm64 libsndfile1 arm64 1.2.2-4+b1 [187 kB] Get:14 http://deb.debian.org/debian unstable/main arm64 libssh2-1-dev arm64 1.11.1-6 [387 kB] Get:15 http://deb.debian.org/debian unstable/main arm64 libssh2-1t64 arm64 1.11.1-6 [235 kB] Get:16 http://deb.debian.org/debian unstable/main arm64 libtasn1-6 arm64 4.21.0-2+b1 [46.9 kB] Get:17 http://deb.debian.org/debian unstable/main arm64 libtasn1-6-dev arm64 4.21.0-2+b1 [96.2 kB] Get:18 http://deb.debian.org/debian unstable/main arm64 libtext-charwidth-perl arm64 0.04-12+b1 [9412 B] Get:19 http://deb.debian.org/debian unstable/main arm64 libtext-unidecode-perl all 1.30-3 [101 kB] Get:20 http://deb.debian.org/debian unstable/main arm64 libtext-wrapi18n-perl all 0.06-11 [7788 B] Get:21 http://deb.debian.org/debian unstable/main arm64 libthai-data all 0.1.30-3 [172 kB] Get:22 http://deb.debian.org/debian unstable/main arm64 libthai0 arm64 0.1.30-3 [50.6 kB] Get:23 http://deb.debian.org/debian unstable/main arm64 libtool all 2.6.2-3 [552 kB] Get:24 http://deb.debian.org/debian unstable/main arm64 libunistring-dev arm64 1.4.2-1 [622 kB] Get:25 http://deb.debian.org/debian unstable/main arm64 libunistring5 arm64 1.4.2-1 [455 kB] Get:26 http://deb.debian.org/debian unstable/main arm64 liburing2 arm64 2.15-1 [28.8 kB] Get:27 http://deb.debian.org/debian unstable/main arm64 libvorbis0a arm64 1.3.7-3+b2 [84.2 kB] Get:28 http://deb.debian.org/debian unstable/main arm64 libsharpyuv-dev arm64 1.6.0-0.1 [118 kB] Get:29 http://deb.debian.org/debian unstable/main arm64 libsharpyuv0 arm64 1.6.0-0.1 [115 kB] Get:30 http://deb.debian.org/debian unstable/main arm64 libsensors-config all 1:3.6.2-2 [16.2 kB] Get:31 http://deb.debian.org/debian unstable/main arm64 libsensors5 arm64 1:3.6.2-2+b2 [36.2 kB] Get:32 http://deb.debian.org/debian unstable/main arm64 libtinfo6 arm64 6.6+20260608-2 [345 kB] Get:33 http://deb.debian.org/debian unstable/main arm64 libssl-dev arm64 3.6.5-1 [3442 kB] Get:34 http://deb.debian.org/debian unstable/main arm64 libssl3t64 arm64 3.6.5-1 [2794 kB] Get:35 http://deb.debian.org/debian unstable/main arm64 libpixman-1-0 arm64 0.46.4-1+b2 [173 kB] Get:36 http://deb.debian.org/debian unstable/main arm64 libpkgconf7 arm64 2.5.1-4 [45.5 kB] Get:37 http://deb.debian.org/debian unstable/main arm64 libpmix2t64 arm64 7.0.0~rc1-2 [698 kB] Get:38 http://deb.debian.org/debian unstable/main arm64 libportaudio2 arm64 19.7.0-1+b1 [58.7 kB] Get:39 http://deb.debian.org/debian unstable/main arm64 libproc2-1 arm64 2:4.0.7-1 [66.2 kB] Get:40 http://deb.debian.org/debian unstable/main arm64 libqhull-r8.0 arm64 2020.2-9 [226 kB] Get:41 http://deb.debian.org/debian unstable/main arm64 libqrupdate1 arm64 1.2.0-1 [34.3 kB] Get:42 http://deb.debian.org/debian unstable/main arm64 libqscintilla2-qt6-15 arm64 2.14.1+dfsg-4 [1074 kB] Get:43 http://deb.debian.org/debian unstable/main arm64 libqscintilla2-qt6-l10n all 2.14.1+dfsg-4 [103 kB] Get:44 http://deb.debian.org/debian unstable/main arm64 libqt6core5compat6 arm64 6.11.2-2 [130 kB] Get:45 http://deb.debian.org/debian unstable/main arm64 libqt6help6 arm64 6.11.2-2 [174 kB] Get:46 http://deb.debian.org/debian unstable/main arm64 libqt5svg5 arm64 5.15.19-2 [126 kB] Get:47 http://deb.debian.org/debian unstable/main arm64 libqt5svg5-dev arm64 5.15.19-2 [11.9 kB] Get:48 http://deb.debian.org/debian unstable/main arm64 librdmacm1t64 arm64 65.0-1.1 [70.9 kB] Get:49 http://deb.debian.org/debian unstable/main arm64 libreadline-dev arm64 8.3-4 [163 kB] Get:50 http://deb.debian.org/debian unstable/main arm64 libreadline8t64 arm64 8.3-4 [168 kB] Get:51 http://deb.debian.org/debian unstable/main arm64 librtmp-dev arm64 2.6-1 [174 kB] Get:52 http://deb.debian.org/debian unstable/main arm64 librtmp1 arm64 2.6-1 [57.4 kB] Get:53 http://deb.debian.org/debian unstable/main arm64 libsqlite3-0 arm64 3.53.4-2 [901 kB] Get:54 http://deb.debian.org/debian unstable/main arm64 libspqr4 arm64 1:7.14.1+dfsg-1 [134 kB] Get:55 http://deb.debian.org/debian unstable/main arm64 libsuitesparseconfig7 arm64 1:7.14.1+dfsg-1 [32.7 kB] Get:56 http://deb.debian.org/debian unstable/main arm64 libumfpack6 arm64 1:7.14.1+dfsg-1 [236 kB] Get:57 http://deb.debian.org/debian unstable/main arm64 libsystemd-shared arm64 262.1-1 [2327 kB] Get:58 http://deb.debian.org/debian unstable/main arm64 libsystemd0 arm64 262.1-1 [431 kB] Get:59 http://deb.debian.org/debian unstable/main arm64 libudev1 arm64 262.1-1 [130 kB] Get:60 http://deb.debian.org/debian unstable/main arm64 libtiff-dev arm64 4.7.2-1 [509 kB] Get:61 http://deb.debian.org/debian unstable/main arm64 libtiff6 arm64 4.7.2-1 [358 kB] Get:62 http://deb.debian.org/debian unstable/main arm64 libtiffxx6 arm64 4.7.2-1 [191 kB] Get:63 http://deb.debian.org/debian unstable/main arm64 libts0t64 arm64 1.22-1.1+b2 [62.0 kB] Get:64 http://deb.debian.org/debian unstable/main arm64 libuchardet0 arm64 0.0.8-2+b2 [69.1 kB] Get:65 http://deb.debian.org/debian unstable/main arm64 libunbound8 arm64 1.26.2-1 [580 kB] Get:66 http://deb.debian.org/debian unstable/main arm64 libsmartcols1 arm64 2.42.4-1 [139 kB] Get:67 http://deb.debian.org/debian unstable/main arm64 libuuid1 arm64 2.42.4-1 [33.1 kB] Get:68 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 libstdc++-16-dev arm64 16.2.0-3 [2580 kB] Get:69 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 libstdc++6 arm64 16.2.0-3 [700 kB] Get:70 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 libtsan2 arm64 16.2.0-3 [2449 kB] Get:71 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 libubsan1 arm64 16.2.0-3 [1079 kB] Get:72 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 libseccomp2 arm64 2.6.1-1+b1 [48.3 kB] Get:73 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 libselinux1 arm64 3.11-2.1 [81.8 kB] Get:74 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 libpython3-stdlib arm64 3.14.7-3 [8252 B] Get:75 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 libpython3.14-minimal arm64 3.14.8-1 [894 kB] Get:76 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 libpython3.14-stdlib arm64 3.14.8-1 [2231 kB] Get:77 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 libqt6core6t64 arm64 6.11.2+dfsg-6 [1764 kB] Get:78 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 libqt6dbus6 arm64 6.11.2+dfsg-6 [253 kB] Get:79 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 libqt6gui6 arm64 6.11.2+dfsg-6 [2977 kB] Get:80 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 libqt6network6 arm64 6.11.2+dfsg-6 [772 kB] Get:81 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 libqt6opengl6 arm64 6.11.2+dfsg-6 [413 kB] Get:82 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 libqt6openglwidgets6 arm64 6.11.2+dfsg-6 [47.0 kB] Get:83 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 libqt6printsupport6 arm64 6.11.2+dfsg-6 [209 kB] Get:84 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 libqt6sql6 arm64 6.11.2+dfsg-6 [138 kB] Get:85 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 libqt6widgets6 arm64 6.11.2+dfsg-6 [2459 kB] Get:86 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 libqt6xml6 arm64 6.11.2+dfsg-6 [81.9 kB] Get:87 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 libqt5concurrent5t64 arm64 5.15.19+dfsg-5 [38.4 kB] Get:88 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 libqt5core5t64 arm64 5.15.19+dfsg-5 [1799 kB] Get:89 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 libqt5dbus5t64 arm64 5.15.19+dfsg-5 [195 kB] Get:90 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 libqt5gui5t64 arm64 5.15.19+dfsg-5 [3235 kB] Get:91 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 libqt5network5t64 arm64 5.15.19+dfsg-5 [636 kB] Get:92 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 libqt5opengl5-dev arm64 5.15.19+dfsg-5 [45.1 kB] Get:93 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 libqt5opengl5t64 arm64 5.15.19+dfsg-5 [137 kB] Get:94 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 libqt5printsupport5t64 arm64 5.15.19+dfsg-5 [190 kB] Get:95 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 libqt5sql5t64 arm64 5.15.19+dfsg-5 [113 kB] Get:96 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 libqt5test5t64 arm64 5.15.19+dfsg-5 [130 kB] Get:97 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 libqt5widgets5t64 arm64 5.15.19+dfsg-5 [2249 kB] Get:98 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 libqt5xml5t64 arm64 5.15.19+dfsg-5 [113 kB] Get:99 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 libucc1 arm64 1.9.0-1 [341 kB] Get:100 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 libucx0 arm64 1.22.0-2 [812 kB] Fetched 50.8 MB in 0s (103 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libsystemd0_262.1-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libqt6openglwidgets6_6.11.2+dfsg-6_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libtinfo6_6.6+20260608-2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libqt6gui6_6.11.2+dfsg-6_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/librtmp-dev_2.6-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libunistring5_1.4.2-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libstdc++-16-dev_16.2.0-3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libsqlite3-0_3.53.4-2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libthai-data_0.1.30-3_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libpmix2t64_7.0.0~rc1-2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libsz2_1.1.7-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libqt6core5compat6_6.11.2-2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libqt6dbus6_6.11.2+dfsg-6_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libqt5concurrent5t64_5.15.19+dfsg-5_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libqt6opengl6_6.11.2+dfsg-6_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libqhull-r8.0_2020.2-9_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libtasn1-6_4.21.0-2+b1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libstdc++6_16.2.0-3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libqt6xml6_6.11.2+dfsg-6_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libsamplerate0_0.2.2-4+b3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libvorbis0a_1.3.7-3+b2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libqscintilla2-qt6-15_2.14.1+dfsg-4_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libqt5opengl5t64_5.15.19+dfsg-5_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libqt6sql6_6.11.2+dfsg-6_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libucx0_1.22.0-2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libqt5svg5-dev_5.15.19-2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libpython3.14-stdlib_3.14.8-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libselinux1_3.11-2.1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libsharpyuv-dev_1.6.0-0.1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libunistring-dev_1.4.2-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libsystemd-shared_262.1-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libpkgconf7_2.5.1-4_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libucc1_1.9.0-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libtiff6_4.7.2-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libtext-charwidth-perl_0.04-12+b1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libuchardet0_0.0.8-2+b2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libqt5xml5t64_5.15.19+dfsg-5_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libssl-dev_3.6.5-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libssh2-1-dev_1.11.1-6_arm64.deb' dpkg-name: info: moved 'libsm6_2%3a1.2.6-1+b2_arm64.deb' to '/srv/rebuilderd/tmp/tmpu1ra42pr/libsm6_1.2.6-1+b2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libqt5network5t64_5.15.19+dfsg-5_arm64.deb' dpkg-name: info: moved 'libsensors-config_1%3a3.6.2-2_all.deb' to '/srv/rebuilderd/tmp/tmpu1ra42pr/libsensors-config_3.6.2-2_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libsasl2-modules-db_2.1.28+dfsg1-12_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libqt5core5t64_5.15.19+dfsg-5_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libts0t64_1.22-1.1+b2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libpython3-stdlib_3.14.7-3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libqt5widgets5t64_5.15.19+dfsg-5_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libssl3t64_3.6.5-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libsharpyuv0_1.6.0-0.1_arm64.deb' dpkg-name: info: moved 'libsensors5_1%3a3.6.2-2+b2_arm64.deb' to '/srv/rebuilderd/tmp/tmpu1ra42pr/libsensors5_3.6.2-2+b2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libqt6network6_6.11.2+dfsg-6_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libunbound8_1.26.2-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libthai0_0.1.30-3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/librdmacm1t64_65.0-1.1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libsmartcols1_2.42.4-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libpsl-dev_0.23.3-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libtiffxx6_4.7.2-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libtool_2.6.2-3_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libsndfile1_1.2.2-4+b1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libtext-wrapi18n-perl_0.06-11_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libtiff-dev_4.7.2-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libreadline-dev_8.3-4_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libsasl2-2_2.1.28+dfsg1-12_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/liburing2_2.15-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libtext-unidecode-perl_1.30-3_all.deb' dpkg-name: info: moved 'libspqr4_1%3a7.14.1+dfsg-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpu1ra42pr/libspqr4_7.14.1+dfsg-1_arm64.deb' dpkg-name: info: moved 'libsuitesparseconfig7_1%3a7.14.1+dfsg-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpu1ra42pr/libsuitesparseconfig7_7.14.1+dfsg-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libpython3.14-minimal_3.14.8-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libseccomp2_2.6.1-1+b1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libqt6printsupport6_6.11.2+dfsg-6_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libpixman-1-0_0.46.4-1+b2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libqt5opengl5-dev_5.15.19+dfsg-5_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libportaudio2_19.7.0-1+b1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libqt5gui5t64_5.15.19+dfsg-5_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libqt6widgets6_6.11.2+dfsg-6_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libqt6help6_6.11.2-2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libqt5svg5_5.15.19-2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libreadline8t64_8.3-4_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libuuid1_2.42.4-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libpsl5t64_0.23.3-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libtsan2_16.2.0-3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libqt5dbus5t64_5.15.19+dfsg-5_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libubsan1_16.2.0-3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libqscintilla2-qt6-l10n_2.14.1+dfsg-4_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libqt6core6t64_6.11.2+dfsg-6_arm64.deb' dpkg-name: info: moved 'libproc2-1_2%3a4.0.7-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpu1ra42pr/libproc2-1_4.0.7-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libqt5test5t64_5.15.19+dfsg-5_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libudev1_262.1-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libqrupdate1_1.2.0-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libssh2-1t64_1.11.1-6_arm64.deb' dpkg-name: info: moved 'libumfpack6_1%3a7.14.1+dfsg-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpu1ra42pr/libumfpack6_7.14.1+dfsg-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libproxy1v5_0.5.12-3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libtasn1-6-dev_4.21.0-2+b1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libraw25_0.22.1-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libqt5sql5t64_5.15.19+dfsg-5_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libpipeline1_1.5.8-3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libsframe3_2.47.50.20261021-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/librtmp1_2.6-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libqt5printsupport5t64_5.15.19+dfsg-5_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1ra42pr/libpng16-16t64_1.6.59-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libvorbisenc2 arm64 1.3.7-3+b2 [75.8 kB] Get:2 http://deb.debian.org/debian unstable/main arm64 libwacom-common all 2.20.0-1 [119 kB] Get:3 http://deb.debian.org/debian unstable/main arm64 libwacom9 arm64 2.20.0-1 [24.4 kB] Get:4 http://deb.debian.org/debian unstable/main arm64 libwebp-dev arm64 1.6.0-0.1 [411 kB] Get:5 http://deb.debian.org/debian unstable/main arm64 libwebp7 arm64 1.6.0-0.1 [280 kB] Get:6 http://deb.debian.org/debian unstable/main arm64 libwebpdecoder3 arm64 1.6.0-0.1 [191 kB] Get:7 http://deb.debian.org/debian unstable/main arm64 libwebpdemux2 arm64 1.6.0-0.1 [113 kB] Get:8 http://deb.debian.org/debian unstable/main arm64 libwebpmux3 arm64 1.6.0-0.1 [125 kB] Get:9 http://deb.debian.org/debian unstable/main arm64 libwmflite-0.2-7 arm64 0.2.14-1 [69.9 kB] Get:10 http://deb.debian.org/debian unstable/main arm64 libx11-6 arm64 2:1.8.13-1 [799 kB] Get:11 http://deb.debian.org/debian unstable/main arm64 libx11-data all 2:1.8.13-1 [346 kB] Get:12 http://deb.debian.org/debian unstable/main arm64 libx11-dev arm64 2:1.8.13-1 [887 kB] Get:13 http://deb.debian.org/debian unstable/main arm64 libx11-xcb1 arm64 2:1.8.13-1 [250 kB] Get:14 http://deb.debian.org/debian unstable/main arm64 libxau-dev arm64 1:1.0.11-1+b2 [24.1 kB] Get:15 http://deb.debian.org/debian unstable/main arm64 libxau6 arm64 1:1.0.11-1+b2 [20.8 kB] Get:16 http://deb.debian.org/debian unstable/main arm64 libxcb-dri3-0 arm64 1.17.0-2+b2 [107 kB] Get:17 http://deb.debian.org/debian unstable/main arm64 libxcb-glx0 arm64 1.17.0-2+b2 [122 kB] Get:18 http://deb.debian.org/debian unstable/main arm64 libxcb-present0 arm64 1.17.0-2+b2 [106 kB] Get:19 http://deb.debian.org/debian unstable/main arm64 libxcb-randr0 arm64 1.17.0-2+b2 [116 kB] Get:20 http://deb.debian.org/debian unstable/main arm64 libxcb-render0 arm64 1.17.0-2+b2 [115 kB] Get:21 http://deb.debian.org/debian unstable/main arm64 libxcb-shape0 arm64 1.17.0-2+b2 [106 kB] Get:22 http://deb.debian.org/debian unstable/main arm64 libxcb-shm0 arm64 1.17.0-2+b2 [105 kB] Get:23 http://deb.debian.org/debian unstable/main arm64 libxcb-sync1 arm64 1.17.0-2+b2 [109 kB] Get:24 http://deb.debian.org/debian unstable/main arm64 libxcb-xfixes0 arm64 1.17.0-2+b2 [109 kB] Get:25 http://deb.debian.org/debian unstable/main arm64 libxcb-xinerama0 arm64 1.17.0-2+b2 [105 kB] Get:26 http://deb.debian.org/debian unstable/main arm64 libxcb-xinput0 arm64 1.17.0-2+b2 [129 kB] Get:27 http://deb.debian.org/debian unstable/main arm64 libxcb-xkb1 arm64 1.17.0-2+b2 [128 kB] Get:28 http://deb.debian.org/debian unstable/main arm64 libxcb1 arm64 1.17.0-2+b2 [142 kB] Get:29 http://deb.debian.org/debian unstable/main arm64 libxcb1-dev arm64 1.17.0-2+b2 [182 kB] Get:30 http://deb.debian.org/debian unstable/main arm64 libxcursor1 arm64 1:1.2.3-1+b2 [39.3 kB] Get:31 http://deb.debian.org/debian unstable/main arm64 libxdmcp-dev arm64 1:1.1.5-2+b1 [43.8 kB] Get:32 http://deb.debian.org/debian unstable/main arm64 libxdmcp6 arm64 1:1.1.5-2+b1 [28.2 kB] Get:33 http://deb.debian.org/debian unstable/main arm64 libxext-dev arm64 2:1.3.4-1+b4 [104 kB] Get:34 http://deb.debian.org/debian unstable/main arm64 libxext6 arm64 2:1.3.4-1+b4 [49.0 kB] Get:35 http://deb.debian.org/debian unstable/main arm64 libxfixes3 arm64 1:6.0.0-2+b5 [20.4 kB] Get:36 http://deb.debian.org/debian unstable/main arm64 libxinerama1 arm64 2:1.1.4-3+b5 [16.0 kB] Get:37 http://deb.debian.org/debian unstable/main arm64 libxkbcommon-x11-0 arm64 1.13.1-1 [19.7 kB] Get:38 http://deb.debian.org/debian unstable/main arm64 libxkbcommon0 arm64 1.13.1-1 [136 kB] Get:39 http://deb.debian.org/debian unstable/main arm64 libxml-libxml-perl arm64 2.0207+dfsg+really+2.0134-8+b1 [299 kB] Get:40 http://deb.debian.org/debian unstable/main arm64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get:41 http://deb.debian.org/debian unstable/main arm64 libxml-sax-base-perl all 1.09-3 [20.6 kB] Get:42 http://deb.debian.org/debian unstable/main arm64 libxml-sax-perl all 1.02+dfsg-5 [53.6 kB] Get:43 http://deb.debian.org/debian unstable/main arm64 libxnvctrl0 arm64 535.171.04-1+b3 [14.0 kB] Get:44 http://deb.debian.org/debian unstable/main arm64 libxrender1 arm64 1:0.9.12-1+b2 [27.2 kB] Get:45 http://deb.debian.org/debian unstable/main arm64 libxshmfence1 arm64 1.3.3-1+b2 [11.4 kB] Get:46 http://deb.debian.org/debian unstable/main arm64 libxxf86vm1 arm64 1:1.1.4-2+b1 [19.8 kB] Get:47 http://deb.debian.org/debian unstable/main arm64 libzstd-dev arm64 1.5.7+dfsg-4 [327 kB] Get:48 http://deb.debian.org/debian unstable/main arm64 libzstd1 arm64 1.5.7+dfsg-4 [258 kB] Get:49 http://deb.debian.org/debian unstable/main arm64 m4 arm64 1.4.21-1 [323 kB] Get:50 http://deb.debian.org/debian unstable/main arm64 make arm64 4.4.1-3+b1 [454 kB] Get:51 http://deb.debian.org/debian unstable/main arm64 man-db arm64 2.13.1-1+b1 [1455 kB] Get:52 http://deb.debian.org/debian unstable/main arm64 matlab-support-dev all 0.5 [5232 B] Get:53 http://deb.debian.org/debian unstable/main arm64 mawk arm64 1.3.4.20260302-2 [134 kB] Get:54 http://deb.debian.org/debian unstable/main arm64 media-types all 14.0.0 [30.8 kB] Get:55 http://deb.debian.org/debian unstable/main arm64 mesa-libgallium arm64 26.2.5-1 [10.9 MB] Get:56 http://deb.debian.org/debian unstable/main arm64 ncurses-base all 6.6+20260608-2 [276 kB] Get:57 http://deb.debian.org/debian unstable/main arm64 ncurses-bin arm64 6.6+20260608-2 [438 kB] Get:58 http://deb.debian.org/debian unstable/main arm64 netbase all 6.6 [10.3 kB] Get:59 http://deb.debian.org/debian unstable/main arm64 nettle-dev arm64 3.10.2-1+b1 [1318 kB] Get:60 http://deb.debian.org/debian unstable/main arm64 ocl-icd-libopencl1 arm64 2.3.4-1+b1 [42.0 kB] Get:61 http://deb.debian.org/debian unstable/main arm64 octave arm64 11.3.0-1+b1 [7911 kB] Get:62 http://deb.debian.org/debian unstable/main arm64 octave-common all 11.3.0-1 [6779 kB] Get:63 http://deb.debian.org/debian unstable/main arm64 octave-dev arm64 11.3.0-1+b1 [1114 kB] Get:64 http://deb.debian.org/debian unstable/main arm64 openssl-provider-legacy arm64 3.6.5-1 [324 kB] Get:65 http://deb.debian.org/debian unstable/main arm64 perl arm64 5.42.3-1 [266 kB] Get:66 http://deb.debian.org/debian unstable/main arm64 perl-base arm64 5.42.3-1 [1691 kB] Get:67 http://deb.debian.org/debian unstable/main arm64 perl-modules-5.42 all 5.42.3-1 [3213 kB] Get:68 http://deb.debian.org/debian unstable/main arm64 pkgconf arm64 2.5.1-4 [33.6 kB] Get:69 http://deb.debian.org/debian unstable/main arm64 pkgconf-bin arm64 2.5.1-4 [35.1 kB] Get:70 http://deb.debian.org/debian unstable/main arm64 po-debconf all 1.0.22 [216 kB] Get:71 http://deb.debian.org/debian unstable/main arm64 procps arm64 2:4.0.7-1 [971 kB] Get:72 http://deb.debian.org/debian unstable/main arm64 qtchooser arm64 66-2+b2 [24.3 kB] Get:73 http://deb.debian.org/debian unstable/main arm64 readline-common all 8.3-4 [74.8 kB] Get:74 http://deb.debian.org/debian unstable/main arm64 sed arm64 4.9-3 [326 kB] Get:75 http://deb.debian.org/debian unstable/main arm64 sensible-utils all 0.0.26 [27.0 kB] Get:76 http://deb.debian.org/debian unstable/main arm64 shared-mime-info arm64 2.4-5+b4 [754 kB] Get:77 http://deb.debian.org/debian unstable/main arm64 libvulkan-dev arm64 1.4.363.0-1 [1952 kB] Get:78 http://deb.debian.org/debian unstable/main arm64 libvulkan1 arm64 1.4.363.0-1 [165 kB] Get:79 http://deb.debian.org/debian unstable/main arm64 libwayland-client0 arm64 1.26.0-1 [27.8 kB] Get:80 http://deb.debian.org/debian unstable/main arm64 libwayland-cursor0 arm64 1.26.0-1 [11.5 kB] Get:81 http://deb.debian.org/debian unstable/main arm64 libwayland-egl1 arm64 1.26.0-1 [5824 B] Get:82 http://deb.debian.org/debian unstable/main arm64 libxcb-util1 arm64 0.4.1-1+b2 [23.8 kB] Get:83 http://deb.debian.org/debian unstable/main arm64 libxcb-cursor0 arm64 0.1.6-1 [17.8 kB] Get:84 http://deb.debian.org/debian unstable/main arm64 libxcb-image0 arm64 0.4.0-2+b3 [21.8 kB] Get:85 http://deb.debian.org/debian unstable/main arm64 libxcb-keysyms1 arm64 0.4.1-1+b2 [17.1 kB] Get:86 http://deb.debian.org/debian unstable/main arm64 libxcb-render-util0 arm64 0.3.10-1+b2 [18.7 kB] Get:87 http://deb.debian.org/debian unstable/main arm64 libxcb-icccm4 arm64 0.4.2-1+b2 [27.5 kB] Get:88 http://deb.debian.org/debian unstable/main arm64 libz3-4 arm64 4.13.3-1.1 [7361 kB] Get:89 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 libxml2-16 arm64 2.15.4+dfsg-1 [602 kB] Get:90 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 linux-libc-dev all 7.2.11-1 [2029 kB] Get:91 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 patch arm64 2.8-2+b1 [128 kB] Get:92 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 pci.ids all 0.0~2026.09.23-1 [287 kB] Get:93 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 python3 arm64 3.14.7-3 [26.0 kB] Get:94 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 python3-minimal arm64 3.14.7-3 [25.3 kB] Get:95 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 python3.14 arm64 3.14.8-1 [874 kB] Get:96 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 python3.14-minimal arm64 3.14.8-1 [2402 kB] Get:97 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 qt5-qmake arm64 5.15.19+dfsg-5 [217 kB] Get:98 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 qt5-qmake-bin arm64 5.15.19+dfsg-5 [908 kB] Get:99 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 qtbase5-dev arm64 5.15.19+dfsg-5 [1117 kB] Get:100 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 qtbase5-dev-tools arm64 5.15.19+dfsg-5 [697 kB] Fetched 65.1 MB in 1s (83.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/patch_2.8-2+b1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/libwebpmux3_1.6.0-0.1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/python3_3.14.7-3_arm64.deb' dpkg-name: info: moved 'libx11-6_2%3a1.8.13-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpoal8dhlo/libx11-6_1.8.13-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/libxnvctrl0_535.171.04-1+b3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/netbase_6.6_all.deb' dpkg-name: info: moved 'libx11-dev_2%3a1.8.13-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpoal8dhlo/libx11-dev_1.8.13-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/sensible-utils_0.0.26_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/qt5-qmake_5.15.19+dfsg-5_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/qtbase5-dev_5.15.19+dfsg-5_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/libxcb-shape0_1.17.0-2+b2_arm64.deb' dpkg-name: info: moved 'procps_2%3a4.0.7-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpoal8dhlo/procps_4.0.7-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/ocl-icd-libopencl1_2.3.4-1+b1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/readline-common_8.3-4_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/qtbase5-dev-tools_5.15.19+dfsg-5_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/libxml-sax-base-perl_1.09-3_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/libxcb-render-util0_0.3.10-1+b2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/libxcb-image0_0.4.0-2+b3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/m4_1.4.21-1_arm64.deb' dpkg-name: info: moved 'libxdmcp-dev_1%3a1.1.5-2+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmpoal8dhlo/libxdmcp-dev_1.1.5-2+b1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/libxcb-xfixes0_1.17.0-2+b2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/libxcb-render0_1.17.0-2+b2_arm64.deb' dpkg-name: info: moved 'libx11-data_2%3a1.8.13-1_all.deb' to '/srv/rebuilderd/tmp/tmpoal8dhlo/libx11-data_1.8.13-1_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/make_4.4.1-3+b1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/man-db_2.13.1-1+b1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/libxcb-shm0_1.17.0-2+b2_arm64.deb' dpkg-name: info: moved 'libxfixes3_1%3a6.0.0-2+b5_arm64.deb' to '/srv/rebuilderd/tmp/tmpoal8dhlo/libxfixes3_6.0.0-2+b5_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/libxcb-keysyms1_0.4.1-1+b2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/pkgconf_2.5.1-4_arm64.deb' dpkg-name: info: moved 'libxext6_2%3a1.3.4-1+b4_arm64.deb' to '/srv/rebuilderd/tmp/tmpoal8dhlo/libxext6_1.3.4-1+b4_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/libwebp-dev_1.6.0-0.1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/po-debconf_1.0.22_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/ncurses-bin_6.6+20260608-2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/perl-base_5.42.3-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/libwebp7_1.6.0-0.1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/mesa-libgallium_26.2.5-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/pci.ids_0.0~2026.09.23-1_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/libxcb-dri3-0_1.17.0-2+b2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/qt5-qmake-bin_5.15.19+dfsg-5_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/python3-minimal_3.14.7-3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/libxml-namespacesupport-perl_1.12-2_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/libxcb-glx0_1.17.0-2+b2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/libzstd1_1.5.7+dfsg-4_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/matlab-support-dev_0.5_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/nettle-dev_3.10.2-1+b1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/libwayland-client0_1.26.0-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/python3.14-minimal_3.14.8-1_arm64.deb' dpkg-name: info: moved 'libxxf86vm1_1%3a1.1.4-2+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmpoal8dhlo/libxxf86vm1_1.1.4-2+b1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/sed_4.9-3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/libxkbcommon-x11-0_1.13.1-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/libvulkan-dev_1.4.363.0-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/libxcb1-dev_1.17.0-2+b2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/libxcb-xkb1_1.17.0-2+b2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/libzstd-dev_1.5.7+dfsg-4_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/linux-libc-dev_7.2.11-1_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/libxml-libxml-perl_2.0207+dfsg+really+2.0134-8+b1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/libwacom9_2.20.0-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/pkgconf-bin_2.5.1-4_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/libwebpdecoder3_1.6.0-0.1_arm64.deb' dpkg-name: info: moved 'libxcursor1_1%3a1.2.3-1+b2_arm64.deb' to '/srv/rebuilderd/tmp/tmpoal8dhlo/libxcursor1_1.2.3-1+b2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/qtchooser_66-2+b2_arm64.deb' dpkg-name: info: moved 'libxau-dev_1%3a1.0.11-1+b2_arm64.deb' to '/srv/rebuilderd/tmp/tmpoal8dhlo/libxau-dev_1.0.11-1+b2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/libwebpdemux2_1.6.0-0.1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/perl_5.42.3-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/libxkbcommon0_1.13.1-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/shared-mime-info_2.4-5+b4_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/libxshmfence1_1.3.3-1+b2_arm64.deb' dpkg-name: info: moved 'libxau6_1%3a1.0.11-1+b2_arm64.deb' to '/srv/rebuilderd/tmp/tmpoal8dhlo/libxau6_1.0.11-1+b2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/octave-dev_11.3.0-1+b1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/libwayland-egl1_1.26.0-1_arm64.deb' dpkg-name: info: moved 'libxext-dev_2%3a1.3.4-1+b4_arm64.deb' to '/srv/rebuilderd/tmp/tmpoal8dhlo/libxext-dev_1.3.4-1+b4_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/libz3-4_4.13.3-1.1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/libxcb-randr0_1.17.0-2+b2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/libwmflite-0.2-7_0.2.14-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/libxcb-util1_0.4.1-1+b2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/ncurses-base_6.6+20260608-2_all.deb' dpkg-name: info: moved 'libx11-xcb1_2%3a1.8.13-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpoal8dhlo/libx11-xcb1_1.8.13-1_arm64.deb' dpkg-name: info: moved 'libxinerama1_2%3a1.1.4-3+b5_arm64.deb' to '/srv/rebuilderd/tmp/tmpoal8dhlo/libxinerama1_1.1.4-3+b5_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/libwacom-common_2.20.0-1_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/libvorbisenc2_1.3.7-3+b2_arm64.deb' dpkg-name: info: moved 'libxdmcp6_1%3a1.1.5-2+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmpoal8dhlo/libxdmcp6_1.1.5-2+b1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/libxcb-cursor0_0.1.6-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/media-types_14.0.0_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/octave-common_11.3.0-1_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/libxml-sax-perl_1.02+dfsg-5_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/libxcb-present0_1.17.0-2+b2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/libwayland-cursor0_1.26.0-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/libxcb-sync1_1.17.0-2+b2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/octave_11.3.0-1+b1_arm64.deb' dpkg-name: info: moved 'libxrender1_1%3a0.9.12-1+b2_arm64.deb' to '/srv/rebuilderd/tmp/tmpoal8dhlo/libxrender1_0.9.12-1+b2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/perl-modules-5.42_5.42.3-1_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/python3.14_3.14.8-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/libvulkan1_1.4.363.0-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/libxcb-icccm4_0.4.2-1+b2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/libxcb1_1.17.0-2+b2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/libxcb-xinput0_1.17.0-2+b2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/libxml2-16_2.15.4+dfsg-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/mawk_1.3.4.20260302-2_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/openssl-provider-legacy_3.6.5-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoal8dhlo/libxcb-xinerama0_1.17.0-2+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 systemd arm64 262.1-1 [3174 kB] Get:2 http://deb.debian.org/debian unstable/main arm64 sysvinit-utils arm64 3.18-1 [29.6 kB] Get:3 http://deb.debian.org/debian unstable/main arm64 tex-common all 6.21 [29.2 kB] Get:4 http://deb.debian.org/debian unstable/main arm64 texinfo all 7.3-2 [1877 kB] Get:5 http://deb.debian.org/debian unstable/main arm64 texinfo-lib arm64 7.3-2+b1 [658 kB] Get:6 http://deb.debian.org/debian unstable/main arm64 tzdata all 2026e-1 [262 kB] Get:7 http://deb.debian.org/debian unstable/main arm64 ucf all 3.0056 [47.1 kB] Get:8 http://deb.debian.org/debian unstable/main arm64 util-linux arm64 2.42.4-1 [1193 kB] Get:9 http://deb.debian.org/debian unstable/main arm64 xkb-data all 2.48-1 [841 kB] Get:10 http://deb.debian.org/debian unstable/main arm64 x11-common all 1:7.7+26 [217 kB] Get:11 http://deb.debian.org/debian unstable/main arm64 xorg-sgml-doctools all 1:1.12.1-1 [23.9 kB] Get:12 http://deb.debian.org/debian unstable/main arm64 x11proto-dev all 2025.1-1 [605 kB] Get:13 http://deb.debian.org/debian unstable/main arm64 xtrans-dev all 1.6.0-1 [93.5 kB] Get:14 http://deb.debian.org/debian unstable/main arm64 xz-utils arm64 5.8.4-1 [758 kB] Get:15 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 tar arm64 1.35+dfsg-6 [801 kB] Get:16 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 zlib1g arm64 1:1.3.dfsg+really1.3.2-3 [87.9 kB] Get:17 http://snapshot.debian.org/archive/debian/20261022T082531Z unstable/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.2-3 [916 kB] Fetched 11.6 MB in 0s (72.2 MB/s) dpkg-name: info: moved 'xorg-sgml-doctools_1%3a1.12.1-1_all.deb' to '/srv/rebuilderd/tmp/tmpxmeha2q3/xorg-sgml-doctools_1.12.1-1_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxmeha2q3/texinfo_7.3-2_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxmeha2q3/ucf_3.0056_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxmeha2q3/xz-utils_5.8.4-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxmeha2q3/x11proto-dev_2025.1-1_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxmeha2q3/sysvinit-utils_3.18-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxmeha2q3/xtrans-dev_1.6.0-1_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxmeha2q3/tzdata_2026e-1_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxmeha2q3/xkb-data_2.48-1_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxmeha2q3/systemd_262.1-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxmeha2q3/tex-common_6.21_all.deb' dpkg-name: info: moved 'zlib1g_1%3a1.3.dfsg+really1.3.2-3_arm64.deb' to '/srv/rebuilderd/tmp/tmpxmeha2q3/zlib1g_1.3.dfsg+really1.3.2-3_arm64.deb' dpkg-name: info: moved 'x11-common_1%3a7.7+26_all.deb' to '/srv/rebuilderd/tmp/tmpxmeha2q3/x11-common_7.7+26_all.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxmeha2q3/util-linux_2.42.4-1_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxmeha2q3/texinfo-lib_7.3-2+b1_arm64.deb' dpkg-name: info: moved 'zlib1g-dev_1%3a1.3.dfsg+really1.3.2-3_arm64.deb' to '/srv/rebuilderd/tmp/tmpxmeha2q3/zlib1g-dev_1.3.dfsg+really1.3.2-3_arm64.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxmeha2q3/tar_1.35+dfsg-6_arm64.deb' dpkg-buildpackage: info: source package debootsnap-dummy dpkg-buildpackage: info: source version 1.0 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Equivs Dummy Package Generator dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 dh clean debian/rules clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/debootsnap-dummy/ dh_install dh_installdocs dh_installchangelogs dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'debootsnap-dummy' in '../debootsnap-dummy_1.0_all.deb'. dpkg-genbuildinfo --build=binary -O../debootsnap-dummy_1.0_arm64.buildinfo dpkg-genchanges --build=binary -O../debootsnap-dummy_1.0_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) The package has been created. Attention, the package has been created in the /srv/rebuilderd/tmp/tmpkz_wjunq/cache directory, not in ".." as indicated by the message above! I: automatically chosen mode: unshare I: chroot architecture arm64 is equal to the host's architecture I: using /srv/rebuilderd/tmp/mmdebstrap.4RGJyyWq_u as tempdir I: running --setup-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/setup00.sh /srv/rebuilderd/tmp/mmdebstrap.4RGJyyWq_u 127.0.0.1 - - [27/Oct/2026 08:22:10] code 404, message File not found 127.0.0.1 - - [27/Oct/2026 08:22:10] "GET /./InRelease HTTP/1.1" 404 - Ign:1 http://localhost:45105 ./ InRelease 127.0.0.1 - - [27/Oct/2026 08:22:10] "GET /./Release HTTP/1.1" 200 - Get:2 http://localhost:45105 ./ Release [462 B] 127.0.0.1 - - [27/Oct/2026 08:22:10] code 404, message File not found 127.0.0.1 - - [27/Oct/2026 08:22:10] "GET /./Release.gpg HTTP/1.1" 404 - Ign:3 http://localhost:45105 ./ Release.gpg 127.0.0.1 - - [27/Oct/2026 08:22:10] "GET /./Packages HTTP/1.1" 200 - Get:4 http://localhost:45105 ./ Packages [645 kB] Fetched 646 kB in 0s (20.3 MB/s) Reading package lists... usr-is-merged found but not real -- not running merged-usr setup hook I: skipping apt-get update because it was already run I: downloading packages with apt... 127.0.0.1 - 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127.0.0.1 - - [27/Oct/2026 08:22:11] "GET /./libsmartcols1_2.42.4-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [27/Oct/2026 08:22:11] "GET /./libudev1_262.1-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [27/Oct/2026 08:22:11] "GET /./libuuid1_2.42.4-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [27/Oct/2026 08:22:11] "GET /./util-linux_2.42.4-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [27/Oct/2026 08:22:11] "GET /./libdebconfclient0_0.283_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [27/Oct/2026 08:22:11] "GET /./base-passwd_3.6.8%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [27/Oct/2026 08:22:11] "GET /./init-system-helpers_1.69%2bnmu3_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [27/Oct/2026 08:22:11] "GET /./libc-bin_2.43-7_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [27/Oct/2026 08:22:11] "GET /./ncurses-base_6.6%2b20260608-2_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [27/Oct/2026 08:22:11] "GET /./sysvinit-utils_3.18-1_arm64.deb HTTP/1.1" 200 - I: extracting archives... I: running --extract-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/extract00.sh /srv/rebuilderd/tmp/mmdebstrap.4RGJyyWq_u 127.0.0.1 - - [27/Oct/2026 08:22:14] code 404, message File not found 127.0.0.1 - - [27/Oct/2026 08:22:14] "GET /./InRelease HTTP/1.1" 404 - Ign:1 http://localhost:45105 ./ InRelease 127.0.0.1 - - [27/Oct/2026 08:22:14] "GET /./Release HTTP/1.1" 304 - Hit:2 http://localhost:45105 ./ Release 127.0.0.1 - - [27/Oct/2026 08:22:14] code 404, message File not found 127.0.0.1 - - [27/Oct/2026 08:22:14] "GET /./Release.gpg HTTP/1.1" 404 - Ign:3 http://localhost:45105 ./ Release.gpg Reading package lists... usr-is-merged found but not real -- not running merged-usr extract hook I: installing essential packages... 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127.0.0.1 - - [27/Oct/2026 08:22:28] "GET /./libnghttp2-dev_1.70.0-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [27/Oct/2026 08:22:28] "GET /./libngtcp2-dev_1.24.0-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [27/Oct/2026 08:22:28] "GET /./libunistring-dev_1.4.2-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [27/Oct/2026 08:22:28] "GET /./libpsl-dev_0.23.3-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [27/Oct/2026 08:22:28] "GET /./librtmp-dev_2.6-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [27/Oct/2026 08:22:28] "GET /./libssl-dev_3.6.5-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [27/Oct/2026 08:22:28] "GET /./libssh2-1-dev_1.11.1-6_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [27/Oct/2026 08:22:28] "GET /./libcurl4-openssl-dev_8.23.0-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [27/Oct/2026 08:22:28] "GET /./hdf5-helpers_2.2.0%2brepack-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [27/Oct/2026 08:22:28] "GET /./libhdf5-dev_2.2.0%2brepack-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [27/Oct/2026 08:22:28] "GET /./gfortran-aarch64-linux-gnu_16.1.0-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [27/Oct/2026 08:22:28] "GET /./liblapack-dev_3.12.1-8_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [27/Oct/2026 08:22:28] "GET /./libqt5opengl5-dev_5.15.19%2bdfsg-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [27/Oct/2026 08:22:28] "GET /./matlab-support-dev_0.5_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [27/Oct/2026 08:22:28] "GET /./gfortran-16_16.2.0-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [27/Oct/2026 08:22:28] "GET /./gfortran_16.1.0-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [27/Oct/2026 08:22:28] "GET /./octave-dev_11.3.0-1%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [27/Oct/2026 08:22:28] "GET /./libeigen3-dev_5.0.1-3_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [27/Oct/2026 08:22:28] "GET /./debootsnap-dummy_1.0_all.deb HTTP/1.1" 200 - I: running --customize-hook directly: /srv/rebuilderd/tmp/tmpkz_wjunq/apt_install.sh /srv/rebuilderd/tmp/mmdebstrap.4RGJyyWq_u Reading package lists... Building dependency tree... Reading state information... base-passwd is already the newest version (3.6.8+b1). libasound2-data is already the newest version (1.2.16.1-2). libasound2-data set to manually installed. libamd3 is already the newest version (1:7.14.1+dfsg-1). libamd3 set to manually installed. krb5-multidev is already the newest version (1.22.1-3). krb5-multidev set to manually installed. libasan8 is already the newest version (16.2.0-3). libasan8 set to manually installed. libavahi-client3 is already the newest version (0.8-18). libavahi-client3 set to manually installed. libaudit-common is already the newest version (1:4.2.1-1). cpp is already the newest version (4:16.1.0-3). cpp set to manually installed. libblas-dev is already the newest version (3.12.1-8). libblas-dev set to manually installed. gfortran-aarch64-linux-gnu is already the newest version (4:16.1.0-3). gfortran-aarch64-linux-gnu set to manually installed. gfortran-16 is already the newest version (16.2.0-3). gfortran-16 set to manually installed. gcc-aarch64-linux-gnu is already the newest version (4:16.1.0-3). gcc-aarch64-linux-gnu set to manually installed. libbinutils is already the newest version (2.47.50.20261021-1). libbinutils set to manually installed. libbsd0 is already the newest version (0.12.2-3). libbsd0 set to manually installed. fonts-dejavu-core is already the newest version (2.37-9). fonts-dejavu-core set to manually installed. libbrotli1 is already the newest version (1.2.0-4+b1). libbrotli1 set to manually installed. libbz2-1.0 is already the newest version (1.0.8-6+b2). dh-strip-nondeterminism is already the newest version (1.15.1-1). dh-strip-nondeterminism set to manually installed. ibverbs-providers is already the newest version (65.0-1.1). ibverbs-providers set to manually installed. groff-base is already the newest version (1.24.2-2). groff-base set to manually installed. imagemagick is already the newest version (8:7.1.2.33+dfsg1-1). imagemagick set to manually installed. fonts-dejavu-mono is already the newest version (2.37-9). fonts-dejavu-mono set to manually installed. autotools-dev is already the newest version (20240727.1+nmu1). autotools-dev set to manually installed. gcc-16 is already the newest version (16.2.0-3). gcc-16 set to manually installed. libblas3 is already the newest version (3.12.1-8). libblas3 set to manually installed. libamd-comgr3 is already the newest version (7.0.2+dfsg-3). libamd-comgr3 set to manually installed. build-essential is already the newest version (12.12). build-essential set to manually installed. gcc-16-base is already the newest version (16.2.0-3). cpp-16-aarch64-linux-gnu is already the newest version (16.2.0-3). cpp-16-aarch64-linux-gnu set to manually installed. coreutils is already the newest version (9.10-1). diffutils is already the newest version (1:3.12-1+b1). hostname is already the newest version (3.25+b1). libcamd3 is already the newest version (1:7.14.1+dfsg-1). libcamd3 set to manually installed. libarchive-zip-perl is already the newest version (1.68-1). libarchive-zip-perl set to manually installed. g++-aarch64-linux-gnu is already the newest version (4:16.1.0-3). g++-aarch64-linux-gnu set to manually installed. gfortran is already the newest version (4:16.1.0-3). gfortran set to manually installed. libarpack2t64 is already the newest version (3.9.1-6+b2). libarpack2t64 set to manually installed. libavahi-common3 is already the newest version (0.8-18). libavahi-common3 set to manually installed. libacl1 is already the newest version (2.4.0-1). grep is already the newest version (3.12-1+b1). bzip2 is already the newest version (1.0.8-6+b2). bzip2 set to manually installed. debianutils is already the newest version (5.24). base-files is already the newest version (14.2). automake is already the newest version (1:1.19-3). automake set to manually installed. gcc-16-aarch64-linux-gnu is already the newest version (16.2.0-3). gcc-16-aarch64-linux-gnu set to manually installed. libc6 is already the newest version (2.43-7). libcap-ng0 is already the newest version (0.9.6-1). bash is already the newest version (5.3-4). binutils-aarch64-linux-gnu is already the newest version (2.47.50.20261021-1). binutils-aarch64-linux-gnu set to manually installed. intltool-debian is already the newest version (0.35.0+20060710.6). intltool-debian set to manually installed. libattr1 is already the newest version (1:2.6.0-1). gettext is already the newest version (1.0-5). gettext set to manually installed. fontconfig-config is already the newest version (2.17.1-5). fontconfig-config set to manually installed. libaec0 is already the newest version (1.1.7-1). libaec0 set to manually installed. init-system-helpers is already the newest version (1.69+nmu3). dwz is already the newest version (0.17-1). dwz set to manually installed. g++-16 is already the newest version (16.2.0-3). g++-16 set to manually installed. imagemagick-7.q16 is already the newest version (8:7.1.2.33+dfsg1-1). imagemagick-7.q16 set to manually installed. comerr-dev is already the newest version (2.1-1.47.4-1+b2). comerr-dev set to manually installed. libc-bin is already the newest version (2.43-7). libamdhip64-6 is already the newest version (6.4.3-5). libamdhip64-6 set to manually installed. gfortran-16-aarch64-linux-gnu is already the newest version (16.2.0-3). gfortran-16-aarch64-linux-gnu set to manually installed. cpp-aarch64-linux-gnu is already the newest version (4:16.1.0-3). cpp-aarch64-linux-gnu set to manually installed. hdf5-helpers is already the newest version (2.2.0+repack-5). hdf5-helpers set to manually installed. autoconf is already the newest version (2.73-2). autoconf set to manually installed. libc-gconv-modules-extra is already the newest version (2.43-7). libaudit1 is already the newest version (1:4.2.1-1). bsdextrautils is already the newest version (2.42.4-1). bsdextrautils set to manually installed. libcairo2 is already the newest version (1.18.4-3+b1). libcairo2 set to manually installed. autopoint is already the newest version (1.0-5). autopoint set to manually installed. file is already the newest version (1:5.47-4). file set to manually installed. dpkg-dev is already the newest version (1.23.11). dpkg-dev set to manually installed. libasound2t64 is already the newest version (1.2.16.1-2). libasound2t64 set to manually installed. gcc is already the newest version (4:16.1.0-3). gcc set to manually installed. fontconfig is already the newest version (2.17.1-5). fontconfig set to manually installed. libbrotli-dev is already the newest version (1.2.0-4+b1). libbrotli-dev set to manually installed. binutils is already the newest version (2.47.50.20261021-1). binutils set to manually installed. imagemagick-7-common is already the newest version (8:7.1.2.33+dfsg1-1). imagemagick-7-common set to manually installed. debconf is already the newest version (1.5.92). libblkid1 is already the newest version (2.42.4-1). dh-autoreconf is already the newest version (23). dh-autoreconf set to manually installed. gzip is already the newest version (1.14-1). binutils-common is already the newest version (2.47.50.20261021-1). binutils-common set to manually installed. findutils is already the newest version (4.11.0-3). libb2-1 is already the newest version (0.98.1-1.1+b3). libb2-1 set to manually installed. libc-dev-bin is already the newest version (2.43-7). libc-dev-bin set to manually installed. cpp-16 is already the newest version (16.2.0-3). cpp-16 set to manually installed. hicolor-icon-theme is already the newest version (0.18-2). hicolor-icon-theme set to manually installed. debhelper is already the newest version (14.5). debhelper set to manually installed. g++-16-aarch64-linux-gnu is already the newest version (16.2.0-3). g++-16-aarch64-linux-gnu set to manually installed. bc is already the newest version (1.07.1-4+b2). bc set to manually installed. libaec-dev is already the newest version (1.1.7-1). libaec-dev set to manually installed. dash is already the newest version (0.5.12-12+b1). dpkg is already the newest version (1.23.11). gettext-base is already the newest version (1.0-5). gettext-base set to manually installed. g++ is already the newest version (4:16.1.0-3). g++ set to manually installed. libavahi-common-data is already the newest version (0.8-18). libavahi-common-data set to manually installed. libatomic1 is already the newest version (16.2.0-3). libatomic1 set to manually installed. libc6-dev is already the newest version (2.43-7). libc6-dev set to manually installed. dh-python is already the newest version (7.20261019). dh-python set to manually installed. libgmp10 is already the newest version (2:6.3.0+dfsg-5+b2). libgomp1 is already the newest version (16.2.0-3). libgomp1 set to manually installed. libglpk40 is already the newest version (5.0-3). libglpk40 set to manually installed. libgssapi-krb5-2 is already the newest version (1.22.1-3). libgssapi-krb5-2 set to manually installed. libflac14 is already the newest version (1.5.0+ds-5+b1). libflac14 set to manually installed. libglib2.0-0t64 is already the newest version (2.90.1-2). libglib2.0-0t64 set to manually installed. libevdev2 is already the newest version (1.14.0+dfsg-1). libevdev2 set to manually installed. libgdbm6t64 is already the newest version (1.26-1+b2). libgdbm6t64 set to manually installed. libgcc-16-dev is already the newest version (16.2.0-3). libgcc-16-dev set to manually installed. libevent-core-2.1-7t64 is already the newest version (2.1.13-stable-1). libevent-core-2.1-7t64 set to manually installed. libdrm-common is already the newest version (2.4.134-3). libdrm-common set to manually installed. libhdf5-hl-320 is already the newest version (2.2.0+repack-5). libhdf5-hl-320 set to manually installed. libduktape207 is already the newest version (2.7.0-2+b3). libduktape207 set to manually installed. libdouble-conversion3 is already the newest version (3.4.0-1+b1). libdouble-conversion3 set to manually installed. libgnutls30t64 is already the newest version (3.8.13-1). libgnutls30t64 set to manually installed. libdb5.3t64 is already the newest version (5.3.28+dfsg2-11+b1). libgprofng0 is already the newest version (2.47.50.20261021-1). libgprofng0 set to manually installed. libgl1-mesa-dri is already the newest version (26.2.5-1). libgl1-mesa-dri set to manually installed. libgnutls28-dev is already the newest version (3.8.13-1). libgnutls28-dev set to manually installed. libcholmod5 is already the newest version (1:7.14.1+dfsg-1). libcholmod5 set to manually installed. libhdf5-hl-cpp-320 is already the newest version (2.2.0+repack-5). libhdf5-hl-cpp-320 set to manually installed. libctf0 is already the newest version (2.47.50.20261021-1). libctf0 set to manually installed. libgmpxx4ldbl is already the newest version (2:6.3.0+dfsg-5+b2). libgmpxx4ldbl set to manually installed. libelf1t64 is already the newest version (0.196-1). libelf1t64 set to manually installed. libesmtp6 is already the newest version (1.1.0-3.2+b2). libesmtp6 set to manually installed. libcurl4-openssl-dev is already the newest version (8.23.0-1). libcurl4-openssl-dev set to manually installed. libgraphicsmagick-q16-3t64 is already the newest version (1.4+really1.3.49-1). libgraphicsmagick-q16-3t64 set to manually installed. libctf-nobfd0 is already the newest version (2.47.50.20261021-1). libctf-nobfd0 set to manually installed. libeigen3-dev is already the newest version (5.0.1-3). libeigen3-dev set to manually installed. libfltk-gl1.4 is already the newest version (1.4.4-4). libfltk-gl1.4 set to manually installed. libclang-common-21-dev is already the newest version (1:21.1.8-14). libclang-common-21-dev set to manually installed. libhdf5-cpp-320 is already the newest version (2.2.0+repack-5). libhdf5-cpp-320 set to manually installed. libfribidi0 is already the newest version (1.0.16-5+b1). libfribidi0 set to manually installed. libfftw3-double3 is already the newest version (3.3.11-1). libfftw3-double3 set to manually installed. libgfortran5 is already the newest version (16.2.0-3). libgfortran5 set to manually installed. libgl1 is already the newest version (1.7.0-3+b1). libgl1 set to manually installed. libfftw3-long3 is already the newest version (3.3.11-1). libfftw3-long3 set to manually installed. libcrypt1 is already the newest version (1:4.5.2+20251210-1). libcurl4t64 is already the newest version (8.23.0-1). libcurl4t64 set to manually installed. libccolamd3 is already the newest version (1:7.14.1+dfsg-1). libccolamd3 set to manually installed. libcurl4-gnutls is already the newest version (8.23.0-1). libcurl4-gnutls set to manually installed. libexpat1 is already the newest version (2.9.0-1). libexpat1 set to manually installed. libdebhelper-perl is already the newest version (14.5). libdebhelper-perl set to manually installed. libglx-mesa0 is already the newest version (26.2.5-1). libglx-mesa0 set to manually installed. libffi8 is already the newest version (3.8.0-2). libffi8 set to manually installed. libegl-mesa0 is already the newest version (26.2.5-1). libegl-mesa0 set to manually installed. libdebconfclient0 is already the newest version (0.283). libgraphicsmagick++-q16-12t64 is already the newest version (1.4+really1.3.49-1). libgraphicsmagick++-q16-12t64 set to manually installed. libgmp-dev is already the newest version (2:6.3.0+dfsg-5+b2). libgmp-dev set to manually installed. libegl-dev is already the newest version (1.7.0-3+b1). libegl-dev set to manually installed. libgsl-dev is already the newest version (2.8+dfsg-6+b1). libgsl-dev set to manually installed. libcom-err2 is already the newest version (1.47.4-1+b2). libcom-err2 set to manually installed. libglu1-mesa is already the newest version (9.0.2-1.1+b4). libglu1-mesa set to manually installed. libgfortran-16-dev is already the newest version (16.2.0-3). libgfortran-16-dev set to manually installed. libfabric1 is already the newest version (2.1.0-1.1+b2). libfabric1 set to manually installed. libegl1 is already the newest version (1.7.0-3+b1). libegl1 set to manually installed. libhdf5-dev is already the newest version (2.2.0+repack-5). libhdf5-dev set to manually installed. libdeflate-dev is already the newest version (1.25-1). libdeflate-dev set to manually installed. libglx-dev is already the newest version (1.7.0-3+b1). libglx-dev set to manually installed. libglu1-mesa-dev is already the newest version (9.0.2-1.1+b4). libglu1-mesa-dev set to manually installed. libglx0 is already the newest version (1.7.0-3+b1). libglx0 set to manually installed. libde265-0 is already the newest version (1.1.3-1+b1). libde265-0 set to manually installed. libgl2ps1.4 is already the newest version (1.4.2+dfsg1-4+b1). libgl2ps1.4 set to manually installed. libharfbuzz0b is already the newest version (12.3.2-2+b2). libharfbuzz0b set to manually installed. libgbm1 is already the newest version (26.2.5-1). libgbm1 set to manually installed. libcc1-0 is already the newest version (16.2.0-3). libcc1-0 set to manually installed. libfftw3-dev is already the newest version (3.3.11-1). libfftw3-dev set to manually installed. libfltk1.4 is already the newest version (1.4.4-4). libfltk1.4 set to manually installed. libcxsparse4 is already the newest version (1:7.14.1+dfsg-1). libcxsparse4 set to manually installed. libevent-pthreads-2.1-7t64 is already the newest version (2.1.13-stable-1). libevent-pthreads-2.1-7t64 set to manually installed. libfftw3-bin is already the newest version (3.3.11-1). libfftw3-bin set to manually installed. libcups2t64 is already the newest version (2.4.20-1). libcups2t64 set to manually installed. libdeflate0 is already the newest version (1.25-1). libdeflate0 set to manually installed. libedit2 is already the newest version (3.1-20260512-1). libedit2 set to manually installed. libevent-2.1-7t64 is already the newest version (2.1.13-stable-1). libevent-2.1-7t64 set to manually installed. libfreetype6 is already the newest version (2.14.3+dfsg-3). libfreetype6 set to manually installed. libfontconfig1 is already the newest version (2.17.1-5). libfontconfig1 set to manually installed. libglvnd0 is already the newest version (1.7.0-3+b1). libglvnd0 set to manually installed. libgslcblas0 is already the newest version (2.8+dfsg-6+b1). libgslcblas0 set to manually installed. libgcc-s1 is already the newest version (16.2.0-3). libgudev-1.0-0 is already the newest version (238-7+b2). libgudev-1.0-0 set to manually installed. libdpkg-perl is already the newest version (1.23.11). libdpkg-perl set to manually installed. libfuse3-4 is already the newest version (3.18.3-1). libfuse3-4 set to manually installed. libcolamd3 is already the newest version (1:7.14.1+dfsg-1). libcolamd3 set to manually installed. libfftw3-single3 is already the newest version (3.3.11-1). libfftw3-single3 set to manually installed. libhdf5-fortran-320 is already the newest version (2.2.0+repack-5). libhdf5-fortran-320 set to manually installed. libfile-stripnondeterminism-perl is already the newest version (1.15.1-1). libfile-stripnondeterminism-perl set to manually installed. libdrm-amdgpu1 is already the newest version (2.4.134-3). libdrm-amdgpu1 set to manually installed. libdecor-0-0 is already the newest version (0.2.5-1+b1). libdecor-0-0 set to manually installed. libdbus-1-3 is already the newest version (1.16.2-8). libdbus-1-3 set to manually installed. libgdbm-compat4t64 is already the newest version (1.26-1+b2). libgdbm-compat4t64 set to manually installed. libgnutls-dane0t64 is already the newest version (3.8.13-1). libgnutls-dane0t64 set to manually installed. libgsl28 is already the newest version (2.8+dfsg-6+b1). libgsl28 set to manually installed. libdav1d7 is already the newest version (1.5.4-1). libdav1d7 set to manually installed. libgraphite2-3 is already the newest version (1.3.15-2). libgraphite2-3 set to manually installed. libhdf5-320 is already the newest version (2.2.0+repack-5). libhdf5-320 set to manually installed. libdrm2 is already the newest version (2.4.134-3). libdrm2 set to manually installed. libdatrie1 is already the newest version (0.2.14-2). libdatrie1 set to manually installed. libgl-dev is already the newest version (1.7.0-3+b1). libgl-dev set to manually installed. libgssrpc4t64 is already the newest version (1.22.1-3). libgssrpc4t64 set to manually installed. libngtcp2-crypto-gnutls8 is already the newest version (1.24.0-1). libngtcp2-crypto-gnutls8 set to manually installed. libisl23 is already the newest version (0.28-1). libisl23 set to manually installed. libopengl0 is already the newest version (1.7.0-3+b1). libopengl0 set to manually installed. libp11-kit-dev is already the newest version (0.26.5-1). libp11-kit-dev set to manually installed. libldap-dev is already the newest version (2.6.14+dfsg-2). libldap-dev set to manually installed. libhdf5-openmpi-320 is already the newest version (2.2.0+repack-5). libhdf5-openmpi-320 set to manually installed. libpcre2-8-0 is already the newest version (10.48-3.1). liblerc4 is already the newest version (4.2.0+ds-1). liblerc4 set to manually installed. libmd4c0 is already the newest version (0.5.3-1). libmd4c0 set to manually installed. libheif1 is already the newest version (1.23.6-2). libheif1 set to manually installed. libnuma1 is already the newest version (2.0.19-1+b2). libnuma1 set to manually installed. liblcms2-2 is already the newest version (2.19.1-1). liblcms2-2 set to manually installed. libnl-route-3-200 is already the newest version (3.12.0-2+b1). libnl-route-3-200 set to manually installed. libpam-runtime is already the newest version (1.7.0-8). libpam-modules-bin is already the newest version (1.7.0-8). libjbig-dev is already the newest version (2.1-6.1+b3). libjbig-dev set to manually installed. liblsan0 is already the newest version (16.2.0-3). liblsan0 set to manually installed. libpangoft2-1.0-0 is already the newest version (1.58.2-1). libpangoft2-1.0-0 set to manually installed. libmpfr6 is already the newest version (4.2.2-3). libmpfr6 set to manually installed. libhwy1t64 is already the newest version (1.3.0-5.1). libhwy1t64 set to manually installed. libperl5.42 is already the newest version (5.42.3-1). libperl5.42 set to manually installed. libhdf5-hl-fortran-320 is already the newest version (2.2.0+repack-5). libhdf5-hl-fortran-320 set to manually installed. libnl-3-200 is already the newest version (3.12.0-2+b1). libnl-3-200 set to manually installed. libhwloc15 is already the newest version (2.15.0-2). libhwloc15 set to manually installed. libjxl0.11 is already the newest version (0.11.2-5.1). libjxl0.11 set to manually installed. libncurses-dev is already the newest version (6.6+20260608-2). libncurses-dev set to manually installed. libinput-bin is already the newest version (1.31.3-1). libinput-bin set to manually installed. libopenjp2-7 is already the newest version (2.5.4-1.1). libopenjp2-7 set to manually installed. libpcre2-16-0 is already the newest version (10.48-3.1). libpcre2-16-0 set to manually installed. libibverbs1 is already the newest version (65.0-1.1). libibverbs1 set to manually installed. libice6 is already the newest version (2:1.1.1-1+b2). libice6 set to manually installed. libllvm21 is already the newest version (1:21.1.8-14). libllvm21 set to manually installed. libmagickwand-7.q16-10 is already the newest version (8:7.1.2.33+dfsg1-1). libmagickwand-7.q16-10 set to manually installed. libmount1 is already the newest version (2.42.4-1). liblqr-1-0 is already the newest version (0.4.2-2.2+b1). liblqr-1-0 set to manually installed. libncurses6 is already the newest version (6.6+20260608-2). libncurses6 set to manually installed. libpango-1.0-0 is already the newest version (1.58.2-1). libpango-1.0-0 set to manually installed. libkrb5support0 is already the newest version (1.22.1-3). libkrb5support0 set to manually installed. libogg0 is already the newest version (1.3.6-2+b1). libogg0 set to manually installed. libopengl-dev is already the newest version (1.7.0-3+b1). libopengl-dev set to manually installed. libnghttp3-9 is already the newest version (1.17.0-1). libnghttp3-9 set to manually installed. libldap2 is already the newest version (2.6.14+dfsg-2). libldap2 set to manually installed. libkadm5srv-mit12 is already the newest version (1.22.1-3). libkadm5srv-mit12 set to manually installed. libheif-plugin-dav1d is already the newest version (1.23.6-2). libheif-plugin-dav1d set to manually installed. libllvm22 is already the newest version (1:22.1.8-3). libllvm22 set to manually installed. libjbig0 is already the newest version (2.1-6.1+b3). libjbig0 set to manually installed. libhwloc-plugins is already the newest version (2.15.0-2). libhwloc-plugins set to manually installed. libngtcp2-crypto-ossl0 is already the newest version (1.24.0-1). libngtcp2-crypto-ossl0 set to manually installed. libinput10 is already the newest version (1.31.3-1). libinput10 set to manually installed. libmpc3 is already the newest version (1.3.1-3). libmpc3 set to manually installed. libngtcp2-16 is already the newest version (1.24.0-1). libngtcp2-16 set to manually installed. libmagic1t64 is already the newest version (1:5.47-4). libmagic1t64 set to manually installed. libjack-jackd2-0 is already the newest version (1.9.22~dfsg-6). libjack-jackd2-0 set to manually installed. libhogweed6t64 is already the newest version (3.10.2-1+b1). libhogweed6t64 set to manually installed. libheif-plugin-libde265 is already the newest version (1.23.6-2). libheif-plugin-libde265 set to manually installed. libmp3lame0 is already the newest version (4.0-1). libmp3lame0 set to manually installed. libmpg123-0t64 is already the newest version (1.33.7-1). libmpg123-0t64 set to manually installed. libpciaccess0 is already the newest version (0.19-2). libpciaccess0 set to manually installed. libidn2-dev is already the newest version (2.3.8-5). libidn2-dev set to manually installed. libibumad3 is already the newest version (65.0-1.1). libibumad3 set to manually installed. libmd0 is already the newest version (1.3.0-1). liblzma-dev is already the newest version (5.8.4-1). liblzma-dev set to manually installed. libjpeg62-turbo-dev is already the newest version (1:3.1.3-4). libjpeg62-turbo-dev set to manually installed. libpangocairo-1.0-0 is already the newest version (1.58.2-1). libpangocairo-1.0-0 set to manually installed. libjpeg-dev is already the newest version (1:3.1.3-4). libjpeg-dev set to manually installed. libkrb5-dev is already the newest version (1.22.1-3). libkrb5-dev set to manually installed. libngtcp2-crypto-ossl-dev is already the newest version (1.24.0-1). libngtcp2-crypto-ossl-dev set to manually installed. liblzma5 is already the newest version (5.8.4-1). libjansson4 is already the newest version (2.15.1-1). libjansson4 set to manually installed. liblapack-dev is already the newest version (3.12.1-8). liblapack-dev set to manually installed. libopenmpi40 is already the newest version (6.0.0~rc2-2). libopenmpi40 set to manually installed. libnghttp2-14 is already the newest version (1.70.0-1). libnghttp2-14 set to manually installed. libhsa-runtime64-1 is already the newest version (6.4.3+dfsg-5). libhsa-runtime64-1 set to manually installed. libmagic-mgc is already the newest version (1:5.47-4). libmagic-mgc set to manually installed. libpam-modules is already the newest version (1.7.0-8). libpam0g is already the newest version (1.7.0-8). libibmad5 is already the newest version (65.0-1.1). libibmad5 set to manually installed. liblerc-dev is already the newest version (4.2.0+ds-1). liblerc-dev set to manually installed. libidn2-0 is already the newest version (2.3.8-5). libidn2-0 set to manually installed. libngtcp2-dev is already the newest version (1.24.0-1). libngtcp2-dev set to manually installed. libk5crypto3 is already the newest version (1.22.1-3). libk5crypto3 set to manually installed. libncursesw6 is already the newest version (6.6+20260608-2). libncursesw6 set to manually installed. libopus0 is already the newest version (1.6.1-1+b1). libopus0 set to manually installed. libp11-kit0 is already the newest version (0.26.5-1). libp11-kit0 set to manually installed. libhwasan0 is already the newest version (16.2.0-3). libhwasan0 set to manually installed. libintl-perl is already the newest version (1.37-1). libintl-perl set to manually installed. libkrb5-3 is already the newest version (1.22.1-3). libkrb5-3 set to manually installed. libltdl7 is already the newest version (2.6.2-3). libltdl7 set to manually installed. libkadm5clnt-mit12 is already the newest version (1.22.1-3). libkadm5clnt-mit12 set to manually installed. libkeyutils1 is already the newest version (1.6.3-6+b2). libkeyutils1 set to manually installed. libkdb5-10t64 is already the newest version (1.22.1-3). libkdb5-10t64 set to manually installed. libmtdev1t64 is already the newest version (1.1.7-1+b2). libmtdev1t64 set to manually installed. libmagickcore-7.q16-10 is already the newest version (8:7.1.2.33+dfsg1-1). libmagickcore-7.q16-10 set to manually installed. libnghttp2-dev is already the newest version (1.70.0-1). libnghttp2-dev set to manually installed. libitm1 is already the newest version (16.2.0-3). libitm1 set to manually installed. libicu78 is already the newest version (78.3-2). libicu78 set to manually installed. libjpeg62-turbo is already the newest version (1:3.1.3-4). libjpeg62-turbo set to manually installed. libnghttp3-dev is already the newest version (1.17.0-1). libnghttp3-dev set to manually installed. libnettle8t64 is already the newest version (3.10.2-1+b1). libnettle8t64 set to manually installed. liblapack3 is already the newest version (3.12.1-8). liblapack3 set to manually installed. libsystemd0 is already the newest version (262.1-1). libqt6openglwidgets6 is already the newest version (6.11.2+dfsg-6). libqt6openglwidgets6 set to manually installed. libtinfo6 is already the newest version (6.6+20260608-2). libqt6gui6 is already the newest version (6.11.2+dfsg-6). libqt6gui6 set to manually installed. librtmp-dev is already the newest version (2.6-1). librtmp-dev set to manually installed. libsensors5 is already the newest version (1:3.6.2-2+b2). libsensors5 set to manually installed. libunistring5 is already the newest version (1.4.2-1). libunistring5 set to manually installed. libstdc++-16-dev is already the newest version (16.2.0-3). libstdc++-16-dev set to manually installed. libsqlite3-0 is already the newest version (3.53.4-2). libsqlite3-0 set to manually installed. libthai-data is already the newest version (0.1.30-3). libthai-data set to manually installed. libpmix2t64 is already the newest version (7.0.0~rc1-2). libpmix2t64 set to manually installed. libsz2 is already the newest version (1.1.7-1). libsz2 set to manually installed. libqt6core5compat6 is already the newest version (6.11.2-2). libqt6core5compat6 set to manually installed. libqt6dbus6 is already the newest version (6.11.2+dfsg-6). libqt6dbus6 set to manually installed. libqt5concurrent5t64 is already the newest version (5.15.19+dfsg-5). libqt5concurrent5t64 set to manually installed. libqt6opengl6 is already the newest version (6.11.2+dfsg-6). libqt6opengl6 set to manually installed. libqhull-r8.0 is already the newest version (2020.2-9). libqhull-r8.0 set to manually installed. libtasn1-6 is already the newest version (4.21.0-2+b1). libtasn1-6 set to manually installed. libstdc++6 is already the newest version (16.2.0-3). libstdc++6 set to manually installed. libqt6xml6 is already the newest version (6.11.2+dfsg-6). libqt6xml6 set to manually installed. libsamplerate0 is already the newest version (0.2.2-4+b3). libsamplerate0 set to manually installed. libvorbis0a is already the newest version (1.3.7-3+b2). libvorbis0a set to manually installed. libqscintilla2-qt6-15 is already the newest version (2.14.1+dfsg-4). libqscintilla2-qt6-15 set to manually installed. libqt5opengl5t64 is already the newest version (5.15.19+dfsg-5). libqt5opengl5t64 set to manually installed. libqt6sql6 is already the newest version (6.11.2+dfsg-6). libqt6sql6 set to manually installed. libucx0 is already the newest version (1.22.0-2). libucx0 set to manually installed. libqt5svg5-dev is already the newest version (5.15.19-2). libqt5svg5-dev set to manually installed. libpython3.14-stdlib is already the newest version (3.14.8-1). libpython3.14-stdlib set to manually installed. libselinux1 is already the newest version (3.11-2.1). libsharpyuv-dev is already the newest version (1.6.0-0.1). libsharpyuv-dev set to manually installed. libunistring-dev is already the newest version (1.4.2-1). libunistring-dev set to manually installed. libsystemd-shared is already the newest version (262.1-1). libsystemd-shared set to manually installed. libpkgconf7 is already the newest version (2.5.1-4). libpkgconf7 set to manually installed. libucc1 is already the newest version (1.9.0-1). libucc1 set to manually installed. libtiff6 is already the newest version (4.7.2-1). libtiff6 set to manually installed. libtext-charwidth-perl is already the newest version (0.04-12+b1). libtext-charwidth-perl set to manually installed. libuchardet0 is already the newest version (0.0.8-2+b2). libuchardet0 set to manually installed. libqt5xml5t64 is already the newest version (5.15.19+dfsg-5). libqt5xml5t64 set to manually installed. libssl-dev is already the newest version (3.6.5-1). libssl-dev set to manually installed. libssh2-1-dev is already the newest version (1.11.1-6). libssh2-1-dev set to manually installed. libqt5network5t64 is already the newest version (5.15.19+dfsg-5). libqt5network5t64 set to manually installed. libsasl2-modules-db is already the newest version (2.1.28+dfsg1-12). libsasl2-modules-db set to manually installed. libqt5core5t64 is already the newest version (5.15.19+dfsg-5). libqt5core5t64 set to manually installed. libts0t64 is already the newest version (1.22-1.1+b2). libts0t64 set to manually installed. libpython3-stdlib is already the newest version (3.14.7-3). libpython3-stdlib set to manually installed. libqt5widgets5t64 is already the newest version (5.15.19+dfsg-5). libqt5widgets5t64 set to manually installed. libssl3t64 is already the newest version (3.6.5-1). libsharpyuv0 is already the newest version (1.6.0-0.1). libsharpyuv0 set to manually installed. libqt6network6 is already the newest version (6.11.2+dfsg-6). libqt6network6 set to manually installed. libunbound8 is already the newest version (1.26.2-1). libunbound8 set to manually installed. libthai0 is already the newest version (0.1.30-3). libthai0 set to manually installed. librdmacm1t64 is already the newest version (65.0-1.1). librdmacm1t64 set to manually installed. libsmartcols1 is already the newest version (2.42.4-1). libpsl-dev is already the newest version (0.23.3-1). libpsl-dev set to manually installed. libtiffxx6 is already the newest version (4.7.2-1). libtiffxx6 set to manually installed. libtool is already the newest version (2.6.2-3). libtool set to manually installed. libsndfile1 is already the newest version (1.2.2-4+b1). libsndfile1 set to manually installed. libtext-wrapi18n-perl is already the newest version (0.06-11). libtext-wrapi18n-perl set to manually installed. libspqr4 is already the newest version (1:7.14.1+dfsg-1). libspqr4 set to manually installed. libtiff-dev is already the newest version (4.7.2-1). libtiff-dev set to manually installed. libreadline-dev is already the newest version (8.3-4). libreadline-dev set to manually installed. libumfpack6 is already the newest version (1:7.14.1+dfsg-1). libumfpack6 set to manually installed. libsm6 is already the newest version (2:1.2.6-1+b2). libsm6 set to manually installed. libsasl2-2 is already the newest version (2.1.28+dfsg1-12). libsasl2-2 set to manually installed. liburing2 is already the newest version (2.15-1). liburing2 set to manually installed. libtext-unidecode-perl is already the newest version (1.30-3). libtext-unidecode-perl set to manually installed. libsuitesparseconfig7 is already the newest version (1:7.14.1+dfsg-1). libsuitesparseconfig7 set to manually installed. libproc2-1 is already the newest version (2:4.0.7-1). libproc2-1 set to manually installed. libpython3.14-minimal is already the newest version (3.14.8-1). libpython3.14-minimal set to manually installed. libseccomp2 is already the newest version (2.6.1-1+b1). libseccomp2 set to manually installed. libqt6printsupport6 is already the newest version (6.11.2+dfsg-6). libqt6printsupport6 set to manually installed. libpixman-1-0 is already the newest version (0.46.4-1+b2). libpixman-1-0 set to manually installed. libqt5opengl5-dev is already the newest version (5.15.19+dfsg-5). libqt5opengl5-dev set to manually installed. libportaudio2 is already the newest version (19.7.0-1+b1). libportaudio2 set to manually installed. libqt5gui5t64 is already the newest version (5.15.19+dfsg-5). libqt5gui5t64 set to manually installed. libqt6widgets6 is already the newest version (6.11.2+dfsg-6). libqt6widgets6 set to manually installed. libqt6help6 is already the newest version (6.11.2-2). libqt6help6 set to manually installed. libqt5svg5 is already the newest version (5.15.19-2). libqt5svg5 set to manually installed. libreadline8t64 is already the newest version (8.3-4). libreadline8t64 set to manually installed. libuuid1 is already the newest version (2.42.4-1). libpsl5t64 is already the newest version (0.23.3-1). libpsl5t64 set to manually installed. libtsan2 is already the newest version (16.2.0-3). libtsan2 set to manually installed. libqt5dbus5t64 is already the newest version (5.15.19+dfsg-5). libqt5dbus5t64 set to manually installed. libubsan1 is already the newest version (16.2.0-3). libubsan1 set to manually installed. libqscintilla2-qt6-l10n is already the newest version (2.14.1+dfsg-4). 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libpipeline1 is already the newest version (1.5.8-3). libpipeline1 set to manually installed. libsframe3 is already the newest version (2.47.50.20261021-1). libsframe3 set to manually installed. librtmp1 is already the newest version (2.6-1). librtmp1 set to manually installed. libqt5printsupport5t64 is already the newest version (5.15.19+dfsg-5). libqt5printsupport5t64 set to manually installed. libpng16-16t64 is already the newest version (1.6.59-1). libpng16-16t64 set to manually installed. libxdmcp-dev is already the newest version (1:1.1.5-2+b1). libxdmcp-dev set to manually installed. patch is already the newest version (2.8-2+b1). patch set to manually installed. libwebpmux3 is already the newest version (1.6.0-0.1). libwebpmux3 set to manually installed. python3 is already the newest version (3.14.7-3). python3 set to manually installed. libxnvctrl0 is already the newest version (535.171.04-1+b3). libxnvctrl0 set to manually installed. netbase is already the newest version (6.6). netbase set to manually installed. sensible-utils is already the newest version (0.0.26). sensible-utils set to manually installed. qt5-qmake is already the newest version (5.15.19+dfsg-5). qt5-qmake set to manually installed. qtbase5-dev is already the newest version (5.15.19+dfsg-5). qtbase5-dev set to manually installed. libxcb-shape0 is already the newest version (1.17.0-2+b2). libxcb-shape0 set to manually installed. ocl-icd-libopencl1 is already the newest version (2.3.4-1+b1). ocl-icd-libopencl1 set to manually installed. readline-common is already the newest version (8.3-4). readline-common set to manually installed. libx11-6 is already the newest version (2:1.8.13-1). libx11-6 set to manually installed. qtbase5-dev-tools is already the newest version (5.15.19+dfsg-5). qtbase5-dev-tools set to manually installed. libxml-sax-base-perl is already the newest version (1.09-3). libxml-sax-base-perl set to manually installed. libxcb-render-util0 is already the newest version (0.3.10-1+b2). libxcb-render-util0 set to manually installed. libxcb-image0 is already the newest version (0.4.0-2+b3). libxcb-image0 set to manually installed. m4 is already the newest version (1.4.21-1). m4 set to manually installed. libxcb-xfixes0 is already the newest version (1.17.0-2+b2). libxcb-xfixes0 set to manually installed. libxcb-render0 is already the newest version (1.17.0-2+b2). libxcb-render0 set to manually installed. libxinerama1 is already the newest version (2:1.1.4-3+b5). libxinerama1 set to manually installed. make is already the newest version (4.4.1-3+b1). make set to manually installed. man-db is already the newest version (2.13.1-1+b1). man-db set to manually installed. libxcb-shm0 is already the newest version (1.17.0-2+b2). libxcb-shm0 set to manually installed. libxcb-keysyms1 is already the newest version (0.4.1-1+b2). libxcb-keysyms1 set to manually installed. pkgconf is already the newest version (2.5.1-4). pkgconf set to manually installed. libwebp-dev is already the newest version (1.6.0-0.1). libwebp-dev set to manually installed. po-debconf is already the newest version (1.0.22). po-debconf set to manually installed. ncurses-bin is already the newest version (6.6+20260608-2). perl-base is already the newest version (5.42.3-1). libwebp7 is already the newest version (1.6.0-0.1). libwebp7 set to manually installed. mesa-libgallium is already the newest version (26.2.5-1). mesa-libgallium set to manually installed. pci.ids is already the newest version (0.0~2026.09.23-1). pci.ids set to manually installed. libxcb-dri3-0 is already the newest version (1.17.0-2+b2). libxcb-dri3-0 set to manually installed. qt5-qmake-bin is already the newest version (5.15.19+dfsg-5). qt5-qmake-bin set to manually installed. python3-minimal is already the newest version (3.14.7-3). python3-minimal set to manually installed. libxml-namespacesupport-perl is already the newest version (1.12-2). libxml-namespacesupport-perl set to manually installed. libxcb-glx0 is already the newest version (1.17.0-2+b2). libxcb-glx0 set to manually installed. libzstd1 is already the newest version (1.5.7+dfsg-4). matlab-support-dev is already the newest version (0.5). matlab-support-dev set to manually installed. nettle-dev is already the newest version (3.10.2-1+b1). nettle-dev set to manually installed. libwayland-client0 is already the newest version (1.26.0-1). libwayland-client0 set to manually installed. python3.14-minimal is already the newest version (3.14.8-1). python3.14-minimal set to manually installed. procps is already the newest version (2:4.0.7-1). procps set to manually installed. sed is already the newest version (4.9-3). libxkbcommon-x11-0 is already the newest version (1.13.1-1). libxkbcommon-x11-0 set to manually installed. libvulkan-dev is already the newest version (1.4.363.0-1). libvulkan-dev set to manually installed. libxcb1-dev is already the newest version (1.17.0-2+b2). libxcb1-dev set to manually installed. libxcursor1 is already the newest version (1:1.2.3-1+b2). libxcursor1 set to manually installed. libxcb-xkb1 is already the newest version (1.17.0-2+b2). libxcb-xkb1 set to manually installed. libzstd-dev is already the newest version (1.5.7+dfsg-4). libzstd-dev set to manually installed. linux-libc-dev is already the newest version (7.2.11-1). linux-libc-dev set to manually installed. libxml-libxml-perl is already the newest version (2.0207+dfsg+really+2.0134-8+b1). libxml-libxml-perl set to manually installed. libx11-data is already the newest version (2:1.8.13-1). libx11-data set to manually installed. libwacom9 is already the newest version (2.20.0-1). libwacom9 set to manually installed. pkgconf-bin is already the newest version (2.5.1-4). pkgconf-bin set to manually installed. libwebpdecoder3 is already the newest version (1.6.0-0.1). libwebpdecoder3 set to manually installed. qtchooser is already the newest version (66-2+b2). qtchooser set to manually installed. libwebpdemux2 is already the newest version (1.6.0-0.1). libwebpdemux2 set to manually installed. perl is already the newest version (5.42.3-1). perl set to manually installed. libx11-dev is already the newest version (2:1.8.13-1). libx11-dev set to manually installed. libxkbcommon0 is already the newest version (1.13.1-1). libxkbcommon0 set to manually installed. shared-mime-info is already the newest version (2.4-5+b4). shared-mime-info set to manually installed. libxxf86vm1 is already the newest version (1:1.1.4-2+b1). libxxf86vm1 set to manually installed. libxshmfence1 is already the newest version (1.3.3-1+b2). libxshmfence1 set to manually installed. octave-dev is already the newest version (11.3.0-1+b1). octave-dev set to manually installed. libxext-dev is already the newest version (2:1.3.4-1+b4). libxext-dev set to manually installed. libwayland-egl1 is already the newest version (1.26.0-1). libwayland-egl1 set to manually installed. libz3-4 is already the newest version (4.13.3-1.1). libz3-4 set to manually installed. libxcb-randr0 is already the newest version (1.17.0-2+b2). libxcb-randr0 set to manually installed. libx11-xcb1 is already the newest version (2:1.8.13-1). libx11-xcb1 set to manually installed. libxdmcp6 is already the newest version (1:1.1.5-2+b1). libxdmcp6 set to manually installed. libwmflite-0.2-7 is already the newest version (0.2.14-1). libwmflite-0.2-7 set to manually installed. libxcb-util1 is already the newest version (0.4.1-1+b2). libxcb-util1 set to manually installed. ncurses-base is already the newest version (6.6+20260608-2). libwacom-common is already the newest version (2.20.0-1). libwacom-common set to manually installed. libvorbisenc2 is already the newest version (1.3.7-3+b2). libvorbisenc2 set to manually installed. libxau6 is already the newest version (1:1.0.11-1+b2). libxau6 set to manually installed. libxfixes3 is already the newest version (1:6.0.0-2+b5). libxfixes3 set to manually installed. libxcb-cursor0 is already the newest version (0.1.6-1). libxcb-cursor0 set to manually installed. media-types is already the newest version (14.0.0). media-types set to manually installed. octave-common is already the newest version (11.3.0-1). octave-common set to manually installed. libxau-dev is already the newest version (1:1.0.11-1+b2). libxau-dev set to manually installed. libxml-sax-perl is already the newest version (1.02+dfsg-5). libxml-sax-perl set to manually installed. libxcb-present0 is already the newest version (1.17.0-2+b2). libxcb-present0 set to manually installed. libwayland-cursor0 is already the newest version (1.26.0-1). libwayland-cursor0 set to manually installed. libxcb-sync1 is already the newest version (1.17.0-2+b2). libxcb-sync1 set to manually installed. octave is already the newest version (11.3.0-1+b1). octave set to manually installed. perl-modules-5.42 is already the newest version (5.42.3-1). perl-modules-5.42 set to manually installed. python3.14 is already the newest version (3.14.8-1). python3.14 set to manually installed. libvulkan1 is already the newest version (1.4.363.0-1). libvulkan1 set to manually installed. libxcb-icccm4 is already the newest version (0.4.2-1+b2). libxcb-icccm4 set to manually installed. libxcb1 is already the newest version (1.17.0-2+b2). libxcb1 set to manually installed. libxcb-xinput0 is already the newest version (1.17.0-2+b2). libxcb-xinput0 set to manually installed. libxext6 is already the newest version (2:1.3.4-1+b4). libxext6 set to manually installed. libxml2-16 is already the newest version (2.15.4+dfsg-1). libxml2-16 set to manually installed. mawk is already the newest version (1.3.4.20260302-2). openssl-provider-legacy is already the newest version (3.6.5-1). libxcb-xinerama0 is already the newest version (1.17.0-2+b2). libxcb-xinerama0 set to manually installed. libxrender1 is already the newest version (1:0.9.12-1+b2). libxrender1 set to manually installed. texinfo is already the newest version (7.3-2). texinfo set to manually installed. xorg-sgml-doctools is already the newest version (1:1.12.1-1). xorg-sgml-doctools set to manually installed. zlib1g is already the newest version (1:1.3.dfsg+really1.3.2-3). ucf is already the newest version (3.0056). ucf set to manually installed. xz-utils is already the newest version (5.8.4-1). xz-utils set to manually installed. x11proto-dev is already the newest version (2025.1-1). x11proto-dev set to manually installed. sysvinit-utils is already the newest version (3.18-1). xtrans-dev is already the newest version (1.6.0-1). xtrans-dev set to manually installed. tzdata is already the newest version (2026e-1). tzdata set to manually installed. xkb-data is already the newest version (2.48-1). xkb-data set to manually installed. systemd is already the newest version (262.1-1). systemd set to manually installed. tex-common is already the newest version (6.21). tex-common set to manually installed. x11-common is already the newest version (1:7.7+26). x11-common set to manually installed. util-linux is already the newest version (2.42.4-1). texinfo-lib is already the newest version (7.3-2+b1). texinfo-lib set to manually installed. zlib1g-dev is already the newest version (1:1.3.dfsg+really1.3.2-3). zlib1g-dev set to manually installed. tar is already the newest version (1.35+dfsg-6). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: running --customize-hook in shell: sh -c 'chroot "$1" dpkg -r debootsnap-dummy' exec /srv/rebuilderd/tmp/mmdebstrap.4RGJyyWq_u (Reading database ... 32334 files and directories currently installed.) Removing debootsnap-dummy (1.0) ... I: running --customize-hook in shell: sh -c 'chroot "$1" dpkg-query --showformat '${binary:Package}=${Version}\n' --show > "$1/pkglist"' exec /srv/rebuilderd/tmp/mmdebstrap.4RGJyyWq_u I: running special hook: download /pkglist ./pkglist I: running --customize-hook in shell: sh -c 'rm "$1/pkglist"' exec /srv/rebuilderd/tmp/mmdebstrap.4RGJyyWq_u I: running special hook: upload sources.list /etc/apt/sources.list I: waiting for background processes to finish... I: cleaning package lists and apt cache... I: skipping cleanup/reproducible as requested I: creating tarball... I: done I: removing tempdir /srv/rebuilderd/tmp/mmdebstrap.4RGJyyWq_u... I: success in 119.3433 seconds Downloading packages 1to 100 out of 517 Downloading packages 101to 200 out of 517 Downloading packages 201to 300 out of 517 Downloading packages 301to 400 out of 517 Downloading packages 401to 500 out of 517 Downloading packages 501to 517 out of 517 env --chdir=/srv/rebuilderd/tmp/rebuilderdANrAbN/out DEB_BUILD_OPTIONS=parallel=8 LANG=C.UTF-8 LC_COLLATE=C.UTF-8 LC_CTYPE=C.UTF-8 SOURCE_DATE_EPOCH=1792624800 SBUILD_CONFIG=/srv/rebuilderd/tmp/debrebuildVRQPm4/debrebuild.sbuildrc.bQIWf8D8vj7C sbuild --build=arm64 --host=arm64 --arch-any --no-arch-all --chroot=/srv/rebuilderd/tmp/debrebuildVRQPm4/debrebuild.tar.6srzLaN3aUt7 --chroot-mode=unshare --dist=unstable --no-run-lintian --no-run-piuparts --no-run-autopkgtest --no-apt-update --no-apt-upgrade --no-apt-distupgrade --no-source --verbose --nolog --bd-uninstallable-explainer= --build-path=/build/reproducible-path --dsc-dir=mrtrix3-3.0.8 /srv/rebuilderd/tmp/rebuilderdANrAbN/inputs/mrtrix3_3.0.8-4.dsc I: consider moving your ~/.sbuildrc to /srv/rebuilderd/.config/sbuild/config.pl The Debian buildds switched to the "unshare" backend and sbuild will default to it in the future. To start using "unshare" add this to your `~/.config/sbuild/config.pl`: $chroot_mode = "unshare"; If you want to keep the old "schroot" mode even in the future, add the following to your `~/.config/sbuild/config.pl`: $chroot_mode = "schroot"; $schroot = "schroot"; sbuild (Debian sbuild) 0.89.3+deb13u4 (28 December 2025) on codethink02-arm64 +==============================================================================+ | mrtrix3 3.0.8-4 (arm64) Tue, 27 Oct 2026 08:24:09 +0000 | +==============================================================================+ Package: mrtrix3 Version: 3.0.8-4 Source Version: 3.0.8-4 Distribution: unstable Machine Architecture: arm64 Host Architecture: arm64 Build Architecture: arm64 Build Type: any I: No tarballs found in /srv/rebuilderd/.cache/sbuild I: Unpacking /srv/rebuilderd/tmp/debrebuildVRQPm4/debrebuild.tar.6srzLaN3aUt7 to /srv/rebuilderd/tmp/tmp.sbuild.p5KFcc_dcg... I: Setting up the chroot... I: Creating chroot session... I: Setting up log color... I: Setting up apt archive... +------------------------------------------------------------------------------+ | Fetch source files Tue, 27 Oct 2026 08:24:18 +0000 | +------------------------------------------------------------------------------+ Local sources ------------- /srv/rebuilderd/tmp/rebuilderdANrAbN/inputs/mrtrix3_3.0.8-4.dsc exists in /srv/rebuilderd/tmp/rebuilderdANrAbN/inputs; copying to chroot +------------------------------------------------------------------------------+ | Install package build dependencies Tue, 27 Oct 2026 08:24:20 +0000 | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 14), bc, dh-python, imagemagick, libeigen3-dev, libgsl-dev, libqt5opengl5-dev, libqt5svg5-dev, libtiff-dev, matlab-support-dev, octave-dev, pkgconf, python3, qtbase5-dev, build-essential Merged Build-Conflicts: clang Filtered Build-Depends: debhelper-compat (= 14), bc, dh-python, imagemagick, libeigen3-dev, libgsl-dev, libqt5opengl5-dev, libqt5svg5-dev, libtiff-dev, matlab-support-dev, octave-dev, pkgconf, python3, qtbase5-dev, build-essential Filtered Build-Conflicts: clang dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/build/reproducible-path/resolver-7kcANu/apt_archive/sbuild-build-depends-main-dummy.deb'. Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies +------------------------------------------------------------------------------+ | Check architectures Tue, 27 Oct 2026 08:24:24 +0000 | +------------------------------------------------------------------------------+ Arch check ok (arm64 included in any-amd64 arm64 all) +------------------------------------------------------------------------------+ | Build environment Tue, 27 Oct 2026 08:24:25 +0000 | +------------------------------------------------------------------------------+ Kernel: Linux 6.12.113+deb13-cloud-arm64 #1 SMP Debian 6.12.113-1 (2026-10-15) arm64 (aarch64) Toolchain package versions: binutils_2.47.50.20261021-1 dpkg-dev_1.23.11 g++-16_16.2.0-3 gcc-16_16.2.0-3 libc6-dev_2.43-7 libstdc++-16-dev_16.2.0-3 libstdc++6_16.2.0-3 linux-libc-dev_7.2.11-1 Package versions: autoconf_2.73-2 automake_1:1.19-3 autopoint_1.0-5 autotools-dev_20240727.1+nmu1 base-files_14.2 base-passwd_3.6.8+b1 bash_5.3-4 bc_1.07.1-4+b2 binutils_2.47.50.20261021-1 binutils-aarch64-linux-gnu_2.47.50.20261021-1 binutils-common_2.47.50.20261021-1 bsdextrautils_2.42.4-1 build-essential_12.12 bzip2_1.0.8-6+b2 comerr-dev_2.1-1.47.4-1+b2 coreutils_9.10-1 cpp_4:16.1.0-3 cpp-16_16.2.0-3 cpp-16-aarch64-linux-gnu_16.2.0-3 cpp-aarch64-linux-gnu_4:16.1.0-3 dash_0.5.12-12+b1 debconf_1.5.92 debhelper_14.5 debianutils_5.24 dh-autoreconf_23 dh-python_7.20261019 dh-strip-nondeterminism_1.15.1-1 diffutils_1:3.12-1+b1 dpkg_1.23.11 dpkg-dev_1.23.11 dwz_0.17-1 file_1:5.47-4 findutils_4.11.0-3 fontconfig_2.17.1-5 fontconfig-config_2.17.1-5 fonts-dejavu-core_2.37-9 fonts-dejavu-mono_2.37-9 g++_4:16.1.0-3 g++-16_16.2.0-3 g++-16-aarch64-linux-gnu_16.2.0-3 g++-aarch64-linux-gnu_4:16.1.0-3 gcc_4:16.1.0-3 gcc-16_16.2.0-3 gcc-16-aarch64-linux-gnu_16.2.0-3 gcc-16-base_16.2.0-3 gcc-aarch64-linux-gnu_4:16.1.0-3 gettext_1.0-5 gettext-base_1.0-5 gfortran_4:16.1.0-3 gfortran-16_16.2.0-3 gfortran-16-aarch64-linux-gnu_16.2.0-3 gfortran-aarch64-linux-gnu_4:16.1.0-3 grep_3.12-1+b1 groff-base_1.24.2-2 gzip_1.14-1 hdf5-helpers_2.2.0+repack-5 hicolor-icon-theme_0.18-2 hostname_3.25+b1 ibverbs-providers_65.0-1.1 imagemagick_8:7.1.2.33+dfsg1-1 imagemagick-7-common_8:7.1.2.33+dfsg1-1 imagemagick-7.q16_8:7.1.2.33+dfsg1-1 init-system-helpers_1.69+nmu3 intltool-debian_0.35.0+20060710.6 krb5-multidev_1.22.1-3 libacl1_2.4.0-1 libaec-dev_1.1.7-1 libaec0_1.1.7-1 libamd-comgr3_7.0.2+dfsg-3 libamd3_1:7.14.1+dfsg-1 libamdhip64-6_6.4.3-5 libarchive-zip-perl_1.68-1 libarpack2t64_3.9.1-6+b2 libasan8_16.2.0-3 libasound2-data_1.2.16.1-2 libasound2t64_1.2.16.1-2 libatomic1_16.2.0-3 libattr1_1:2.6.0-1 libaudit-common_1:4.2.1-1 libaudit1_1:4.2.1-1 libavahi-client3_0.8-18 libavahi-common-data_0.8-18 libavahi-common3_0.8-18 libb2-1_0.98.1-1.1+b3 libbinutils_2.47.50.20261021-1 libblas-dev_3.12.1-8 libblas3_3.12.1-8 libblkid1_2.42.4-1 libbrotli-dev_1.2.0-4+b1 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qtbase5-dev-tools_5.15.19+dfsg-5 qtchooser_66-2+b2 readline-common_8.3-4 sed_4.9-3 sensible-utils_0.0.26 shared-mime-info_2.4-5+b4 systemd_262.1-1 sysvinit-utils_3.18-1 tar_1.35+dfsg-6 tex-common_6.21 texinfo_7.3-2 texinfo-lib_7.3-2+b1 tzdata_2026e-1 ucf_3.0056 util-linux_2.42.4-1 x11-common_1:7.7+26 x11proto-dev_2025.1-1 xkb-data_2.48-1 xorg-sgml-doctools_1:1.12.1-1 xtrans-dev_1.6.0-1 xz-utils_5.8.4-1 zlib1g_1:1.3.dfsg+really1.3.2-3 zlib1g-dev_1:1.3.dfsg+really1.3.2-3 +------------------------------------------------------------------------------+ | Build Tue, 27 Oct 2026 08:24:25 +0000 | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: mrtrix3 Binary: mrtrix3, mrtrix3-doc Architecture: any-amd64 arm64 all Version: 3.0.8-4 Maintainer: Debian Med Packaging Team Uploaders: Michael Hanke , Yaroslav Halchenko , Étienne Mollier Homepage: https://www.mrtrix.org Standards-Version: 4.7.4 Vcs-Browser: https://salsa.debian.org/med-team/mrtrix3 Vcs-Git: https://salsa.debian.org/med-team/mrtrix3.git Build-Depends: debhelper-compat (= 14), bc, dh-python, imagemagick, libeigen3-dev, libgsl-dev, libqt5opengl5-dev, libqt5svg5-dev, libtiff-dev, matlab-support-dev, octave-dev, pkgconf, python3, qtbase5-dev Build-Conflicts: clang Package-List: mrtrix3 deb science optional arch=any-amd64,arm64 mrtrix3-doc deb doc optional arch=all Checksums-Sha1: 3d12cda10cacf20ac6905ed544e910d82d36af69 4057854 mrtrix3_3.0.8.orig.tar.gz d81c5203634e358e18746596658b53ab9f54b54a 12084 mrtrix3_3.0.8-4.debian.tar.xz Checksums-Sha256: 7ca0ec513fe32421f453b8bdc5a7355a4563fd0247eea92fd5998ebd81a988aa 4057854 mrtrix3_3.0.8.orig.tar.gz a73f0cca1736f33588e7f51d46ee8fc3cc4b3651afffc06f711167e4d66c6c87 12084 mrtrix3_3.0.8-4.debian.tar.xz Files: 9485a0aa0f771b1aab64630597a2691f 4057854 mrtrix3_3.0.8.orig.tar.gz 20d25829425cf796a4e10ae4e231c0da 12084 mrtrix3_3.0.8-4.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQEzBAEBCgAdFiEE1Uw7+v+wQt44LaXXQc5/C58bizIFAmrZSUQACgkQQc5/C58b izLnhwf+NKUxALAHRz96Gwbu5tF30R21dnoYybkS3rJAHVcKYVVkdNrGX1Y6K9eI 45Mo9fby8lQv36Lhg1rQPTZe8ZfCjle0sdUEy10Zogc11mgYNLGhDIJIpj2o4xZU d1zZpd5hYX5BZEG9S4DxF8FXQS5t7glD72KcH2Q9fX7G/c201q0mT/SzS8XDeeHd 8jVl4U8i8gVXlrKjNkTInECe2SQQUD6T5n5VPqm0hz2KatFCzbd4kU0AMpM6Hk+2 ZHpzgo9uUHEhxqroBF/7vs9g4vsKeivh1VvchtA+QsLih9VH65i1Tg/YUtvRlTms J2d70HrVRcyay8SzdndEyX7ZOa0RZQ== =huLV -----END PGP SIGNATURE----- dpkg-source: warning: cannot verify inline signature for ./mrtrix3_3.0.8-4.dsc: missing OpenPGP keyrings dpkg-source: info: verifying ./mrtrix3_3.0.8-4.dsc dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-keyring.pgp dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-tag2upload.pgp dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-nonupload.pgp dpkg-source: info: skipping absent keyring /usr/share/keyrings/debian-maintainers.pgp dpkg-source: info: extracting mrtrix3 in /build/reproducible-path/mrtrix3-3.0.8 dpkg-source: info: unpacking mrtrix3_3.0.8.orig.tar.gz dpkg-source: info: unpacking mrtrix3_3.0.8-4.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying debian_build_cfg dpkg-source: info: applying python3.patch dpkg-source: info: applying mrtrix_version.patch dpkg-source: info: applying libeigen5.0.patch dpkg-source: info: applying eigen-jacobisvd-signature.patch dpkg-source: info: applying eigen5-openmp.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=8 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LC_COLLATE=C.UTF-8 LC_CTYPE=C.UTF-8 LOGNAME=sbuild PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SHELL=/bin/sh SOURCE_DATE_EPOCH=1792624800 USER=sbuild dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -us -uc -B dpkg-buildpackage: info: source package mrtrix3 dpkg-buildpackage: info: source version 3.0.8-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Santiago Vila dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean debian/rules override_dh_clean make[1]: Entering directory '/build/reproducible-path/mrtrix3-3.0.8' [ -f config ] && python3 ./build clean || true find . -name '*.pyc' -delete rm -f clean \ config configure.log build.log \ core/version.cpp lib/mrtrix3/_version.py src/exec_version.cpp \ icons/mrview.qrc icons/shview.qrc dh_clean make[1]: Leaving directory '/build/reproducible-path/mrtrix3-3.0.8' debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/mrtrix3-3.0.8' ./configure -openmp # -debug MRtrix build type requested: release version with openmp Detecting OS: linux Looking for compiler [clang++]: not found Looking for compiler [g++]: g++ (Debian 16.2.0-3) 16.2.0 Checking for C++14 compliance: ok Checking shared library generation: ok Detecting pointer size: 64 bit Detecting byte order: little-endian Checking for variable-length array support: ok Checking for non-POD variable-length array support: ok Checking for ::max_align_t: 16 bytes Checking for std::max_align_t: 16 bytes Checking for Eigen3 library: 3.5.0 Checking for Eigen3 Unsupported: Present Checking for zlib compression library: 1.3.2 Checking for "JSON for Modern C++" requirements: ok Checking for TIFF library: LIBTIFF, Version 4.7.2 Checking for PNG library: not found - PNG support disabled Checking for FFTW library: fftw-3.3.11 Checking for OpenMP support: ok Checking for Qt moc: moc (version 5.15.19) Checking for Qt qmake: qmake (version 5.15.19) Checking for Qt rcc: rcc (version 5.15.19) Checking for Qt: 5.15.19 writing configuration to file './config': ok make[1]: Leaving directory '/build/reproducible-path/mrtrix3-3.0.8' debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/mrtrix3-3.0.8' ./build -verbose active config is default reading configuration from "config"... /build/reproducible-path/mrtrix3-3.0.8/./build:549: DeprecationWarning: codecs.open() is deprecated. Use open() instead. with codecs.open (config_file, mode='r', encoding='utf-8') as f: is_likely_text: bin/5ttgen: starts with shebang is_likely_text: bin/blend: starts with shebang is_likely_text: bin/convert_bruker: starts with shebang is_likely_text: bin/dwi2response: starts with shebang is_likely_text: bin/dwibiascorrect: starts with shebang is_likely_text: bin/dwicat: starts with shebang is_likely_text: bin/dwifslpreproc: starts with shebang is_likely_text: bin/dwigradcheck: starts with shebang is_likely_text: bin/dwinormalise: starts with shebang is_likely_text: bin/dwishellmath: starts with shebang is_likely_text: bin/for_each: starts with shebang is_likely_text: bin/gen_scheme: starts with shebang is_likely_text: bin/labelsgmfix: starts with shebang is_likely_text: bin/mrtrix3.py: utf-8 encoded is_likely_text: bin/mrtrix_cleanup: starts with shebang is_likely_text: bin/notfound: starts with shebang is_likely_text: bin/population_template: starts with shebang is_likely_text: bin/responsemean: starts with shebang getting MRtrix version from folder "."... fetching version information from "MRTRIX_BASE_VERSION" in "./core/version.h": 3.0.8 Using MRtrix version "3.0.8" version file "./core/version.cpp" is out of date - updating version file "./src/exec_version.cpp" is out of date - updating compiling TODO list... /build/reproducible-path/mrtrix3-3.0.8/./build:1032: DeprecationWarning: codecs.open() is deprecated. Use open() instead. with codecs.open (current_file, mode='r', encoding='utf-8') as fd: /build/reproducible-path/mrtrix3-3.0.8/./build:866: DeprecationWarning: codecs.open() is deprecated. Use open() instead. with codecs.open (modify_path (self.name, strip=cpp_suffix, add=h_suffix), mode='r', encoding='utf-8') as fd: building targets: bin/mrtransform bin/mrdump bin/tck2connectome bin/tckconvert bin/dcmedit bin/mrinfo bin/tckdfc bin/transformconvert bin/tcktransform bin/sh2amp bin/voxel2mesh bin/tckresample bin/mrhistmatch bin/tck2fixel bin/mrview bin/mrclusterstats bin/fixelcrop bin/fixelreorient bin/dirmerge bin/peaks2amp bin/5ttedit bin/warp2metric bin/dirflip bin/mrdegibbs bin/tckedit bin/shbasis bin/warpcorrect bin/fixelcfestats bin/mredit bin/vectorstats bin/5ttcheck bin/dwi2tensor bin/maskdump bin/transformcompose bin/maskfilter bin/amp2sh bin/5tt2vis bin/mrcalc bin/connectomeedit bin/mrconvert bin/mrregister bin/fixelfilter bin/sh2peaks bin/mtnormalise bin/mrcheckerboardmask bin/mrstats bin/fixelconvert bin/tckstats bin/mrcat bin/mrmetric bin/sh2power bin/dirgen bin/shconv bin/mrcentroid bin/label2colour bin/warpinit bin/tckglobal bin/connectomestats bin/tcksample bin/mrcolour bin/dwi2adc bin/dcminfo bin/mrhistogram bin/connectome2tck bin/transformcalc bin/fod2fixel bin/label2mesh bin/mraverageheader bin/tckmap bin/tckinfo bin/labelconvert bin/peaks2fixel bin/amp2response bin/warpconvert bin/5tt2gmwmi bin/tcksift bin/fixel2peaks bin/mrfilter bin/dirstat bin/mrthreshold bin/mrgrid bin/fixel2tsf bin/tensor2metric bin/tsfvalidate bin/dwiextract bin/mesh2voxel bin/labelstats bin/tsfthreshold bin/fixel2sh bin/warpinvert bin/tcksift2 bin/tsfinfo bin/dwi2mask bin/fixelcorrespondence bin/tsfmult bin/mrmath bin/shview bin/meshconvert bin/tckgen bin/tsfsmooth bin/fixel2voxel bin/voxel2fixel bin/fixelconnectivity bin/fod2dec bin/tsfdivide bin/meshfilter bin/dwidenoise bin/dirorder bin/dwi2fod bin/afdconnectivity bin/sh2response bin/dirsplit TODO list contains 548 items Build will use 8 threads ( 1/548) [CC] tmp/src/exec_version.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/exec_version.cpp -o tmp/src/exec_version.o ( 2/548) [CC] tmp/src/dwi/directions/predefined.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/directions/predefined.cpp -o tmp/src/dwi/directions/predefined.o ( 3/548) [CC] tmp/src/registration/multi_contrast.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/registration/multi_contrast.cpp -o tmp/src/registration/multi_contrast.o ( 4/548) [CC] tmp/core/image_io/ram.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/image_io/ram.cpp -o tmp/core/image_io/ram.o ( 5/548) [CC] tmp/core/file/dicom/image.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/file/dicom/image.cpp -o tmp/core/file/dicom/image.o ( 6/548) [CC] tmp/core/file/key_value.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/file/key_value.cpp -o tmp/core/file/key_value.o ( 7/548) [CC] tmp/core/file/config.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/file/config.cpp -o tmp/core/file/config.o ( 8/548) [CC] tmp/core/file/dicom/quick_scan.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/file/dicom/quick_scan.cpp -o tmp/core/file/dicom/quick_scan.o ( 9/548) [CC] tmp/core/formats/xds.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/formats/xds.cpp -o tmp/core/formats/xds.o ( 10/548) [CC] tmp/core/metadata/bids.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/metadata/bids.cpp -o tmp/core/metadata/bids.o ( 11/548) [CC] tmp/core/axes.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/axes.cpp -o tmp/core/axes.o ( 12/548) [CC] tmp/core/header.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/header.cpp -o tmp/core/header.o ( 13/548) [CC] tmp/core/adapter/reslice.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/adapter/reslice.cpp -o tmp/core/adapter/reslice.o ( 14/548) [CC] tmp/core/math/zstatistic.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/math/zstatistic.cpp -o tmp/core/math/zstatistic.o ( 15/548) [CC] tmp/core/datatype.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/datatype.cpp -o tmp/core/datatype.o ( 16/548) [CC] tmp/core/file/name_parser.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/file/name_parser.cpp -o tmp/core/file/name_parser.o ( 17/548) [CC] tmp/core/image_io/pipe.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/image_io/pipe.cpp -o tmp/core/image_io/pipe.o ( 18/548) [CC] tmp/core/file/tiff.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time 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[CC] tmp/core/mrtrix.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/mrtrix.cpp -o tmp/core/mrtrix.o ( 47/548) [CC] tmp/core/image_io/scratch.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 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-DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/math/average_space.cpp -o tmp/core/math/average_space.o ( 50/548) [CC] tmp/core/formats/par.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/formats/par.cpp -o tmp/core/formats/par.o ( 51/548) [CC] tmp/core/filter/connected_components.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/filter/connected_components.cpp -o tmp/core/filter/connected_components.o ( 52/548) [CC] tmp/core/image_io/sparse.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/image_io/sparse.cpp -o tmp/core/image_io/sparse.o ( 53/548) [CC] tmp/core/file/png.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/file/png.cpp -o tmp/core/file/png.o ( 54/548) [CC] tmp/core/math/stats/glm.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/math/stats/glm.cpp -o tmp/core/math/stats/glm.o ( 55/548) [CC] tmp/core/image_io/tiff.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/image_io/tiff.cpp -o tmp/core/image_io/tiff.o ( 56/548) [CC] tmp/core/misc/bitset.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/misc/bitset.cpp -o tmp/core/misc/bitset.o ( 57/548) [CC] tmp/core/image_io/fetch_store.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/image_io/fetch_store.cpp -o tmp/core/image_io/fetch_store.o ( 58/548) [CC] tmp/core/progressbar.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/progressbar.cpp -o tmp/core/progressbar.o ( 59/548) [CC] tmp/core/file/nifti_utils.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/file/nifti_utils.cpp -o tmp/core/file/nifti_utils.o ( 60/548) [CC] tmp/core/math/stats/shuffle.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/math/stats/shuffle.cpp -o tmp/core/math/stats/shuffle.o ( 61/548) [CC] tmp/core/file/ofstream.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/file/ofstream.cpp -o tmp/core/file/ofstream.o ( 62/548) [CC] tmp/core/file/mmap.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/file/mmap.cpp -o tmp/core/file/mmap.o ( 63/548) [CC] tmp/core/formats/tiff.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/formats/tiff.cpp -o tmp/core/formats/tiff.o ( 64/548) [CC] tmp/core/formats/list.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/formats/list.cpp -o tmp/core/formats/list.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/file/json_utils.cpp -o tmp/core/file/json_utils.o: In file included from /usr/include/c++/16/bits/exception_ptr.h:41, from /usr/include/c++/16/exception:182, from /usr/include/c++/16/ios:43, from /usr/include/c++/16/istream:42, from /usr/include/c++/16/fstream:42, from core/file/json_utils.cpp:17: In function ‘std::_Require >, std::is_move_constructible<_Tp>, std::is_move_assignable<_Tp> > std::swap(_Tp&, _Tp&) [with _Tp = nlohmann::basic_json<>::json_value]’, inlined from ‘nlohmann::basic_json::value_type& nlohmann::basic_json::operator=(nlohmann::basic_json) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string; BooleanType = bool; NumberIntegerType = long int; NumberUnsignedType = long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at ./core/file/json.h:2890:18, inlined from ‘nlohmann::basic_json nlohmann::basic_json::parser::parse_internal(bool) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string; BooleanType = bool; NumberIntegerType = long int; NumberUnsignedType = long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at ./core/file/json.h:12715:36: /usr/include/c++/16/bits/move.h:239:7: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 239 | __a = _GLIBCXX_MOVE(__b); | ^~~ In file included from ./core/file/json_utils.h:20, from core/file/json_utils.cpp:20: ./core/file/json.h: In member function ‘nlohmann::basic_json nlohmann::basic_json::parser::parse_internal(bool) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string; BooleanType = bool; NumberIntegerType = long int; NumberUnsignedType = long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’: ./core/file/json.h:12715:38: note: ‘’ declared here 12715 | result = basic_json(value_t::discarded); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘std::_Require >, std::is_move_constructible<_Tp>, std::is_move_assignable<_Tp> > std::swap(_Tp&, _Tp&) [with _Tp = nlohmann::basic_json<>::json_value]’, inlined from ‘nlohmann::basic_json::value_type& nlohmann::basic_json::operator=(nlohmann::basic_json) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string; BooleanType = bool; NumberIntegerType = long int; NumberUnsignedType = long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at ./core/file/json.h:2890:18, inlined from ‘nlohmann::basic_json nlohmann::basic_json::parser::parse_internal(bool) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string; BooleanType = bool; NumberIntegerType = long int; NumberUnsignedType = long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at ./core/file/json.h:12768:32: /usr/include/c++/16/bits/move.h:239:7: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 239 | __a = _GLIBCXX_MOVE(__b); | ^~~ ./core/file/json.h: In member function ‘nlohmann::basic_json nlohmann::basic_json::parser::parse_internal(bool) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string; BooleanType = bool; NumberIntegerType = long int; NumberUnsignedType = long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’: ./core/file/json.h:12768:34: note: ‘’ declared here 12768 | result = basic_json(value_t::discarded); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘std::_Require >, std::is_move_constructible<_Tp>, std::is_move_assignable<_Tp> > std::swap(_Tp&, _Tp&) [with _Tp = nlohmann::basic_json<>::json_value]’, inlined from ‘nlohmann::basic_json::value_type& nlohmann::basic_json::operator=(nlohmann::basic_json) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string; BooleanType = bool; NumberIntegerType = long int; NumberUnsignedType = long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at ./core/file/json.h:2890:18, inlined from ‘nlohmann::basic_json nlohmann::basic_json::parser::parse_internal(bool) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string; BooleanType = bool; NumberIntegerType = long int; NumberUnsignedType = long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at ./core/file/json.h:12792:36: /usr/include/c++/16/bits/move.h:239:7: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 239 | __a = _GLIBCXX_MOVE(__b); | ^~~ ./core/file/json.h: In member function ‘nlohmann::basic_json nlohmann::basic_json::parser::parse_internal(bool) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string; BooleanType = bool; NumberIntegerType = long int; NumberUnsignedType = long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’: ./core/file/json.h:12792:38: note: ‘’ declared here 12792 | result = basic_json(value_t::discarded); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘std::_Require >, std::is_move_constructible<_Tp>, std::is_move_assignable<_Tp> > std::swap(_Tp&, _Tp&) [with _Tp = nlohmann::basic_json<>::json_value]’, inlined from ‘nlohmann::basic_json::value_type& nlohmann::basic_json::operator=(nlohmann::basic_json) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string; BooleanType = bool; NumberIntegerType = long int; NumberUnsignedType = long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at ./core/file/json.h:2890:18, inlined from ‘nlohmann::basic_json nlohmann::basic_json::parser::parse_internal(bool) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string; BooleanType = bool; NumberIntegerType = long int; NumberUnsignedType = long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at ./core/file/json.h:12822:32: /usr/include/c++/16/bits/move.h:239:7: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 239 | __a = _GLIBCXX_MOVE(__b); | ^~~ ./core/file/json.h: In member function ‘nlohmann::basic_json nlohmann::basic_json::parser::parse_internal(bool) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string; BooleanType = bool; NumberIntegerType = long int; NumberUnsignedType = long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’: ./core/file/json.h:12822:34: note: ‘’ declared here 12822 | result = basic_json(value_t::discarded); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘std::_Require >, std::is_move_constructible<_Tp>, std::is_move_assignable<_Tp> > std::swap(_Tp&, _Tp&) [with _Tp = nlohmann::basic_json<>::json_value]’, inlined from ‘nlohmann::basic_json::value_type& nlohmann::basic_json::operator=(nlohmann::basic_json) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string; BooleanType = bool; NumberIntegerType = long int; NumberUnsignedType = long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at ./core/file/json.h:2890:18, inlined from ‘nlohmann::basic_json nlohmann::basic_json::parser::parse_internal(bool) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string; BooleanType = bool; NumberIntegerType = long int; NumberUnsignedType = long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’ at ./core/file/json.h:12897:24: /usr/include/c++/16/bits/move.h:239:7: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 239 | __a = _GLIBCXX_MOVE(__b); | ^~~ ./core/file/json.h: In member function ‘nlohmann::basic_json nlohmann::basic_json::parser::parse_internal(bool) [with ObjectType = std::map; ArrayType = std::vector; StringType = std::__cxx11::basic_string; BooleanType = bool; NumberIntegerType = long int; NumberUnsignedType = long unsigned int; NumberFloatType = double; AllocatorType = std::allocator; JSONSerializer = nlohmann::adl_serializer]’: ./core/file/json.h:12897:26: note: ‘’ declared here 12897 | result = basic_json(value_t::discarded); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ( 65/548) [CC] tmp/core/formats/nifti1.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/formats/nifti1.cpp -o tmp/core/formats/nifti1.o ( 66/548) [CC] tmp/core/image_io/variable_scaling.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/image_io/variable_scaling.cpp -o tmp/core/image_io/variable_scaling.o ( 67/548) [CC] tmp/core/formats/ram.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/formats/ram.cpp -o tmp/core/formats/ram.o ( 68/548) [CC] tmp/core/file/dicom/select_cmdline.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/file/dicom/select_cmdline.cpp -o tmp/core/file/dicom/select_cmdline.o ( 69/548) [CC] tmp/core/version.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/version.cpp -o tmp/core/version.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/version.cpp -o tmp/core/version.o: core/version.cpp:5:30: warning: macro ‘__DATE__’ might prevent reproducible builds [-Wdate-time] 5 | const char* build_date = __DATE__; | ^~~~~~~~ ( 70/548) [CC] tmp/core/metadata/slice_encoding.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/metadata/slice_encoding.cpp -o tmp/core/metadata/slice_encoding.o ( 71/548) [CC] tmp/core/dwi/gradient.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/dwi/gradient.cpp -o tmp/core/dwi/gradient.o ( 72/548) [CC] tmp/core/math/erfinv.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/math/erfinv.cpp -o tmp/core/math/erfinv.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/math/stats/shuffle.cpp -o tmp/core/math/stats/shuffle.o: core/math/stats/shuffle.cpp: In member function ‘void MR::Math::Stats::Shuffler::generate_random_permutations(size_t, size_t, const MR::Math::Stats::index_array_type&, const MR::Math::Stats::index_array_type&, bool, bool)’: core/math/stats/shuffle.cpp:465:35: warning: ‘void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator > >]’ is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 465 | std::random_shuffle (permuted_labelling.begin(), permuted_labelling.end()); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/16/algorithm:63, from ./core/mrtrix.h:27, from ./core/cmdline_option.h:28, from ./core/app.h:29, from ./core/math/stats/shuffle.h:21, from core/math/stats/shuffle.cpp:18: /usr/include/c++/16/bits/stl_algo.h:4511:5: note: declared here 4511 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ core/math/stats/shuffle.cpp:484:37: warning: ‘void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator > >]’ is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 484 | std::random_shuffle (permuted_block.begin(), permuted_block.end()); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/16/bits/stl_algo.h:4511:5: note: declared here 4511 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ core/math/stats/shuffle.cpp:508:33: warning: ‘void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator > >]’ is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 508 | std::random_shuffle (permuted_blocks.begin(), permuted_blocks.end()); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/16/bits/stl_algo.h:4511:5: note: declared here 4511 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ ( 73/548) [CC] tmp/core/stats.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/stats.cpp -o tmp/core/stats.o ( 74/548) [CC] tmp/core/formats/mri.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/formats/mri.cpp -o tmp/core/formats/mri.o ( 75/548) [CC] tmp/core/thread.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/thread.cpp -o tmp/core/thread.o ( 76/548) [CC] tmp/core/math/SH.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/math/SH.cpp -o tmp/core/math/SH.o ( 77/548) [CC] tmp/core/file/dicom/dict.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/file/dicom/dict.cpp -o tmp/core/file/dicom/dict.o ( 78/548) [CC] tmp/core/formats/mrtrix_gz.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/formats/mrtrix_gz.cpp -o tmp/core/formats/mrtrix_gz.o ( 79/548) [CC] tmp/core/file/dicom/patient.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/file/dicom/patient.cpp -o tmp/core/file/dicom/patient.o ( 80/548) [CC] tmp/core/formats/mrtrix_utils.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/formats/mrtrix_utils.cpp -o tmp/core/formats/mrtrix_utils.o ( 81/548) [CC] tmp/core/image_io/mosaic.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/image_io/mosaic.cpp -o tmp/core/image_io/mosaic.o ( 82/548) [CC] tmp/core/exception.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/exception.cpp -o tmp/core/exception.o ( 83/548) [CC] tmp/core/image_io/default.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/image_io/default.cpp -o tmp/core/image_io/default.o ( 84/548) [CC] tmp/core/file/dicom/tree.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/file/dicom/tree.cpp -o tmp/core/file/dicom/tree.o ( 85/548) [CC] tmp/core/formats/mgz.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/formats/mgz.cpp -o tmp/core/formats/mgz.o ( 86/548) [CC] tmp/core/math/stats/fwe.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. 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-o tmp/cmd/tckdfc.o (113/548) [CC] tmp/src/dwi/tractography/mapping/mapper.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/mapping/mapper.cpp -o tmp/src/dwi/tractography/mapping/mapper.o (114/548) [CC] tmp/src/dwi/tractography/mapping/mapping.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/mapping/mapping.cpp -o tmp/src/dwi/tractography/mapping/mapping.o (115/548) [CC] tmp/src/dwi/tractography/resampling/downsampler.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/resampling/downsampler.cpp -o tmp/src/dwi/tractography/resampling/downsampler.o (116/548) [CC] tmp/src/dwi/tractography/resampling/fixed_num_points.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/resampling/fixed_num_points.cpp -o tmp/src/dwi/tractography/resampling/fixed_num_points.o (117/548) [CC] tmp/src/dwi/tractography/resampling/arc.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/resampling/arc.cpp -o tmp/src/dwi/tractography/resampling/arc.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 core/math/stats/glm.cpp -o tmp/core/math/stats/glm.o: core/math/stats/glm.cpp: In function ‘MR::Math::Stats::matrix_type MR::Math::Stats::GLM::solve_betas(const MR::Math::Stats::matrix_type&, const MR::Math::Stats::matrix_type&)’: core/math/stats/glm.cpp:185:35: warning: ‘Eigen::JacobiSVD::PlainObject, Options> Eigen::MatrixBase::jacobiSvd(unsigned int) const [with int Options = 0; Derived = Eigen::Matrix; typename Eigen::DenseBase::PlainObject = Eigen::Matrix]’ is deprecated: Options should be specified using method's template parameter. [-Wdeprecated-declarations] 185 | return design.jacobiSvd (Eigen::ComputeThinU | Eigen::ComputeThinV).solve (measurements); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/eigen3/Eigen/SVD:39, from /usr/include/eigen3/Eigen/Geometry:13, from ./core/types.h:78, from ./core/mrtrix.h:38, from ./core/cmdline_option.h:28, from ./core/app.h:29, from ./core/math/stats/glm.h:20, from core/math/stats/glm.cpp:17: /usr/include/eigen3/Eigen/src/SVD/JacobiSVD.h:839:63: note: declared here 839 | JacobiSVD::PlainObject, Options> MatrixBase::jacobiSvd( | ^~~~~~~~~~~~~~~~~~~ (118/548) [LD] lib/libmrtrix.so g++ tmp/core/image_io/ram.o tmp/core/file/dicom/image.o tmp/core/file/config.o tmp/core/file/dicom/quick_scan.o tmp/core/file/key_value.o tmp/core/formats/xds.o tmp/core/metadata/bids.o tmp/core/axes.o tmp/core/header.o tmp/core/adapter/reslice.o tmp/core/math/zstatistic.o tmp/core/datatype.o tmp/core/file/name_parser.o tmp/core/image_io/pipe.o tmp/core/file/tiff.o tmp/core/math/stats/import.o tmp/core/formats/nifti1_gz.o tmp/core/formats/mgh.o tmp/core/algo/histogram.o tmp/core/dwi/shells.o tmp/core/file/dicom/element.o tmp/core/formats/nifti2.o tmp/core/image_io/gz.o tmp/core/file/mgh.o tmp/core/formats/mrtrix.o tmp/core/metadata/phase_encoding.o tmp/core/formats/pipe.o tmp/core/formats/png.o tmp/core/file/dicom/mapper.o tmp/core/image_io/base.o tmp/core/formats/dicom.o tmp/core/file/dicom/series.o tmp/core/formats/mrtrix_sparse_legacy.o tmp/core/math/betainc.o tmp/core/math/bessel.o tmp/core/app.o tmp/core/formats/nifti2_gz.o tmp/core/image_io/null.o tmp/core/image_io/png.o tmp/core/file/dicom/study.o tmp/core/stride.o tmp/core/file/json_utils.o tmp/core/mrtrix.o tmp/core/image_io/scratch.o tmp/core/signal_handler.o tmp/core/math/average_space.o tmp/core/formats/par.o tmp/core/filter/connected_components.o tmp/core/image_io/sparse.o tmp/core/file/png.o tmp/core/math/stats/glm.o tmp/core/image_io/tiff.o tmp/core/misc/bitset.o tmp/core/image_io/fetch_store.o tmp/core/progressbar.o tmp/core/file/nifti_utils.o tmp/core/math/stats/shuffle.o tmp/core/file/ofstream.o tmp/core/file/mmap.o tmp/core/formats/tiff.o tmp/core/formats/list.o tmp/core/formats/nifti1.o tmp/core/image_io/variable_scaling.o tmp/core/formats/ram.o tmp/core/file/dicom/select_cmdline.o tmp/core/version.o tmp/core/metadata/slice_encoding.o tmp/core/dwi/gradient.o tmp/core/math/erfinv.o tmp/core/stats.o tmp/core/formats/mri.o tmp/core/thread.o tmp/core/math/SH.o tmp/core/file/dicom/dict.o tmp/core/formats/mrtrix_gz.o tmp/core/file/dicom/patient.o tmp/core/formats/mrtrix_utils.o tmp/core/image_io/mosaic.o tmp/core/exception.o tmp/core/image_io/default.o tmp/core/file/dicom/tree.o tmp/core/formats/mgz.o tmp/core/math/stats/fwe.o -shared -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -o lib/libmrtrix.so (119/548) [CC] tmp/cmd/transformconvert.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/transformconvert.cpp -o tmp/cmd/transformconvert.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tckconvert.cpp -o tmp/cmd/tckconvert.o: cmd/tckconvert.cpp: In member function ‘Eigen::Vector3f PLYWriter::computeNormal(const MR::DWI::Tractography::Streamline&)’: cmd/tckconvert.cpp:390:33: warning: ‘Eigen::JacobiSVD::PlainObject, Options> Eigen::MatrixBase::jacobiSvd(unsigned int) const [with int Options = 0; Derived = Eigen::Matrix; typename Eigen::DenseBase::PlainObject = Eigen::Matrix]’ is deprecated: Options should be specified using method's template parameter. [-Wdeprecated-declarations] 390 | auto svd = coord.jacobiSvd(Eigen::ComputeThinU | Eigen::ComputeThinV); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/eigen3/Eigen/SVD:39, from /usr/include/eigen3/Eigen/Geometry:13, from ./core/types.h:78, from ./core/mrtrix.h:38, from ./core/cmdline_option.h:28, from ./core/app.h:29, from ./core/command.h:25, from cmd/tckconvert.cpp:19: /usr/include/eigen3/Eigen/src/SVD/JacobiSVD.h:839:63: note: declared here 839 | JacobiSVD::PlainObject, Options> MatrixBase::jacobiSvd( | ^~~~~~~~~~~~~~~~~~~ (120/548) [CC] tmp/cmd/tcktransform.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tcktransform.cpp -o tmp/cmd/tcktransform.o (121/548) [CC] tmp/src/dwi/directions/file.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/directions/file.cpp -o tmp/src/dwi/directions/file.o (122/548) [LB] bin/mrdump g++ tmp/src/exec_version.o tmp/cmd/mrdump.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrdump (123/548) [LB] bin/tck2connectome g++ tmp/src/exec_version.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/seeding/list.o tmp/src/connectome/connectome.o tmp/src/dwi/tractography/file_base.o tmp/cmd/tck2connectome.o tmp/src/dwi/tractography/connectome/matrix.o tmp/src/dwi/tractography/connectome/connectome.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/connectome/tck2nodes.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/weights.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tck2connectome (124/548) [LB] bin/tckconvert g++ tmp/src/exec_version.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/seeding/list.o tmp/cmd/tckconvert.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/file_base.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tckconvert (125/548) [LB] bin/dcmedit g++ tmp/src/exec_version.o tmp/cmd/dcmedit.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dcmedit (126/548) [LB] bin/mrinfo g++ tmp/src/exec_version.o tmp/cmd/mrinfo.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrinfo (127/548) [CC] tmp/cmd/sh2amp.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/sh2amp.cpp -o tmp/cmd/sh2amp.o (128/548) [CC] tmp/src/connectome/lut.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/connectome/lut.cpp -o tmp/src/connectome/lut.o (129/548) [CC] tmp/src/surface/scalar.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/surface/scalar.cpp -o tmp/src/surface/scalar.o (130/548) [CC] tmp/cmd/voxel2mesh.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/voxel2mesh.cpp -o tmp/cmd/voxel2mesh.o (131/548) [LB] bin/transformconvert g++ tmp/src/exec_version.o tmp/cmd/transformconvert.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/transformconvert (132/548) [CC] tmp/src/surface/mesh.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/surface/mesh.cpp -o tmp/src/surface/mesh.o (133/548) [CC] tmp/src/surface/polygon.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/surface/polygon.cpp -o tmp/src/surface/polygon.o (134/548) [CC] tmp/src/surface/freesurfer.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/surface/freesurfer.cpp -o tmp/src/surface/freesurfer.o (135/548) [CC] tmp/cmd/tckresample.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tckresample.cpp -o tmp/cmd/tckresample.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/surface/mesh.cpp -o tmp/src/surface/mesh.o: src/surface/mesh.cpp: In member function ‘void MR::Surface::Mesh::load_vtk(const std::string&)’: src/surface/mesh.cpp:187:40: warning: unused variable ‘v_float’ [-Wunused-variable] 187 | Eigen::Matrix v_float; | ^~~~~~~ (136/548) [CC] tmp/cmd/mrhistmatch.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrhistmatch.cpp -o tmp/cmd/mrhistmatch.o (137/548) [CC] tmp/cmd/tck2fixel.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tck2fixel.cpp -o tmp/cmd/tck2fixel.o (138/548) [LB] bin/tcktransform g++ tmp/src/exec_version.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/cmd/tcktransform.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/file_base.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tcktransform (139/548) [CC] tmp/src/gui/mrview/tool/connectome/colourmap_observers.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/connectome/colourmap_observers.cpp -o tmp/src/gui/mrview/tool/connectome/colourmap_observers.o (140/548) [LB] bin/sh2amp g++ tmp/src/exec_version.o tmp/src/dwi/directions/file.o tmp/cmd/sh2amp.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/sh2amp (141/548) [MOC] tmp/src/gui/mrview/tool/transform_moc.cpp moc src/gui/mrview/tool/transform.h -o tmp/src/gui/mrview/tool/transform_moc.cpp (142/548) [CC] tmp/src/gui/mrview/tool/transform_moc.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/tool/transform_moc.cpp -o tmp/src/gui/mrview/tool/transform_moc.o (143/548) [LB] bin/tckdfc g++ tmp/src/dwi/tractography/rng.o tmp/src/dwi/directions/set.o tmp/src/dwi/tractography/seeding/list.o tmp/src/exec_version.o tmp/src/dwi/tractography/mapping/voxel.o tmp/src/dwi/tractography/resampling/endpoints.o tmp/src/dwi/tractography/resampling/upsampler.o tmp/src/dwi/tractography/mapping/writer.o tmp/src/dwi/tractography/mapping/mapper_plugins.o tmp/src/dwi/tractography/resampling/resampling.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/resampling/fixed_step_size.o tmp/src/dwi/tractography/mapping/twi_stats.o tmp/cmd/tckdfc.o tmp/src/dwi/directions/predefined.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/mapping/mapper.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/mapping/mapping.o tmp/src/dwi/tractography/resampling/downsampler.o tmp/src/dwi/tractography/resampling/fixed_num_points.o tmp/src/dwi/tractography/resampling/arc.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tckdfc (144/548) [CC] tmp/src/gui/dialog/file.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/dialog/file.cpp -o tmp/src/gui/dialog/file.o (145/548) [LB] bin/tckresample g++ tmp/src/exec_version.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/resampling/endpoints.o tmp/src/dwi/tractography/resampling/downsampler.o tmp/src/dwi/tractography/resampling/upsampler.o tmp/src/dwi/tractography/resampling/resampling.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/resampling/fixed_step_size.o tmp/cmd/tckresample.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/resampling/fixed_num_points.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/resampling/arc.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tckresample (146/548) [CC] tmp/src/gui/opengl/gl_core_3_3.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/opengl/gl_core_3_3.cpp -o tmp/src/gui/opengl/gl_core_3_3.o (147/548) [CC] tmp/src/gui/mrview/adjust_button.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/adjust_button.cpp -o tmp/src/gui/mrview/adjust_button.o (148/548) [LB] bin/voxel2mesh g++ tmp/src/exec_version.o tmp/src/connectome/connectome.o tmp/src/connectome/lut.o tmp/src/surface/scalar.o tmp/cmd/voxel2mesh.o tmp/src/surface/mesh.o tmp/src/surface/polygon.o tmp/src/surface/freesurfer.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/voxel2mesh (149/548) [CC] tmp/src/gui/mrview/mode/volume.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/mode/volume.cpp -o tmp/src/gui/mrview/mode/volume.o (150/548) [CC] tmp/src/gui/opengl/lighting.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/opengl/lighting.cpp -o tmp/src/gui/opengl/lighting.o (151/548) [CC] tmp/src/gui/cursor.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/cursor.cpp -o tmp/src/gui/cursor.o (152/548) [CC] tmp/src/gui/color_button.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/color_button.cpp -o tmp/src/gui/color_button.o (153/548) [CC] tmp/src/gui/mrview/volume.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/volume.cpp -o tmp/src/gui/mrview/volume.o (154/548) [CC] tmp/src/gui/mrview/tool/connectome/matrix_list.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/connectome/matrix_list.cpp -o tmp/src/gui/mrview/tool/connectome/matrix_list.o (155/548) [CC] tmp/src/gui/mrview/sync/client.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/sync/client.cpp -o tmp/src/gui/mrview/sync/client.o (156/548) [MOC] tmp/src/gui/mrview/sync/syncmanager_moc.cpp moc src/gui/mrview/sync/syncmanager.h -o tmp/src/gui/mrview/sync/syncmanager_moc.cpp (157/548) [CC] tmp/src/gui/mrview/sync/syncmanager_moc.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/sync/syncmanager_moc.cpp -o tmp/src/gui/mrview/sync/syncmanager_moc.o (158/548) [CC] tmp/src/gui/mrview/tool/connectome/node_list.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/connectome/node_list.cpp -o tmp/src/gui/mrview/tool/connectome/node_list.o (159/548) [MOC] tmp/src/gui/mrview/spin_box_moc.cpp moc src/gui/mrview/spin_box.h -o tmp/src/gui/mrview/spin_box_moc.cpp (160/548) [CC] tmp/src/gui/mrview/spin_box_moc.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/spin_box_moc.cpp -o tmp/src/gui/mrview/spin_box_moc.o (161/548) [CC] tmp/src/gui/mrview/tool/connectome/node.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/connectome/node.cpp -o tmp/src/gui/mrview/tool/connectome/node.o (162/548) [LB] bin/mrhistmatch g++ tmp/src/exec_version.o tmp/cmd/mrhistmatch.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrhistmatch (163/548) [CC] tmp/src/gui/mrview/tool/tractography/track_scalar_file.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/tractography/track_scalar_file.cpp -o tmp/src/gui/mrview/tool/tractography/track_scalar_file.o (164/548) [CC] tmp/src/gui/dialog/opengl.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/dialog/opengl.cpp -o tmp/src/gui/dialog/opengl.o (165/548) [CC] tmp/src/gui/mrview/tool/connectome/selection.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/connectome/selection.cpp -o tmp/src/gui/mrview/tool/connectome/selection.o (166/548) [MOC] tmp/src/gui/mrview/tool/view_moc.cpp moc src/gui/mrview/tool/view.h -o tmp/src/gui/mrview/tool/view_moc.cpp (167/548) [CC] tmp/src/gui/mrview/tool/view_moc.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/tool/view_moc.cpp -o tmp/src/gui/mrview/tool/view_moc.o (168/548) [MOC] tmp/src/gui/mrview/sync/localsocketreader_moc.cpp moc src/gui/mrview/sync/localsocketreader.h -o tmp/src/gui/mrview/sync/localsocketreader_moc.cpp (169/548) [CC] tmp/src/gui/mrview/sync/localsocketreader_moc.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/sync/localsocketreader_moc.cpp -o tmp/src/gui/mrview/sync/localsocketreader_moc.o (170/548) [CC] tmp/src/gui/dialog/dicom.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/dialog/dicom.cpp -o tmp/src/gui/dialog/dicom.o (171/548) [CC] tmp/src/gui/shapes/cube.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/shapes/cube.cpp -o tmp/src/gui/shapes/cube.o (172/548) [MOC] tmp/src/gui/mrview/tool/fixel/fixel_moc.cpp moc src/gui/mrview/tool/fixel/fixel.h -o tmp/src/gui/mrview/tool/fixel/fixel_moc.cpp (173/548) [CC] tmp/src/gui/mrview/tool/fixel/fixel_moc.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/tool/fixel/fixel_moc.cpp -o tmp/src/gui/mrview/tool/fixel/fixel_moc.o (174/548) [LB] bin/tck2fixel g++ tmp/src/dwi/tractography/rng.o tmp/src/dwi/directions/set.o tmp/src/dwi/tractography/seeding/list.o tmp/src/exec_version.o tmp/src/dwi/tractography/mapping/voxel.o tmp/src/dwi/tractography/resampling/endpoints.o tmp/src/dwi/tractography/resampling/downsampler.o tmp/src/dwi/tractography/resampling/upsampler.o tmp/src/dwi/tractography/mapping/writer.o tmp/src/dwi/tractography/mapping/mapper_plugins.o tmp/src/dwi/tractography/resampling/resampling.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/resampling/fixed_step_size.o tmp/src/dwi/tractography/mapping/twi_stats.o tmp/src/dwi/directions/predefined.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/mapping/mapper.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/mapping/mapping.o tmp/cmd/tck2fixel.o tmp/src/dwi/tractography/resampling/fixed_num_points.o tmp/src/dwi/tractography/resampling/arc.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tck2fixel (175/548) [MOC] tmp/src/gui/mrview/mode/ortho_moc.cpp moc src/gui/mrview/mode/ortho.h -o tmp/src/gui/mrview/mode/ortho_moc.cpp (176/548) [CC] tmp/src/gui/mrview/mode/ortho_moc.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/mode/ortho_moc.cpp -o tmp/src/gui/mrview/mode/ortho_moc.o (177/548) [MOC] tmp/src/gui/mrview/colourmap_button_moc.cpp moc src/gui/mrview/colourmap_button.h -o tmp/src/gui/mrview/colourmap_button_moc.cpp (178/548) [CC] tmp/src/gui/mrview/colourmap_button_moc.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/colourmap_button_moc.cpp -o tmp/src/gui/mrview/colourmap_button_moc.o (179/548) [CC] tmp/src/gui/mrview/tool/roi_editor/item.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/roi_editor/item.cpp -o tmp/src/gui/mrview/tool/roi_editor/item.o (180/548) [MOC] tmp/src/gui/mrview/tool/tractography/tractogram_moc.cpp moc src/gui/mrview/tool/tractography/tractogram.h -o tmp/src/gui/mrview/tool/tractography/tractogram_moc.cpp (181/548) [CC] tmp/src/gui/mrview/tool/tractography/tractogram_moc.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/tool/tractography/tractogram_moc.cpp -o tmp/src/gui/mrview/tool/tractography/tractogram_moc.o (182/548) [CC] tmp/src/gui/crosshair.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/crosshair.cpp -o tmp/src/gui/crosshair.o (183/548) [CC] tmp/src/gui/mrview/tool/odf/model.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/odf/model.cpp -o tmp/src/gui/mrview/tool/odf/model.o (184/548) [CC] tmp/src/gui/dialog/dialog.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/dialog/dialog.cpp -o tmp/src/gui/dialog/dialog.o (185/548) [MOC] tmp/src/gui/dwi/render_frame_moc.cpp moc src/gui/dwi/render_frame.h -o tmp/src/gui/dwi/render_frame_moc.cpp (186/548) [CC] tmp/src/gui/dwi/render_frame_moc.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/dwi/render_frame_moc.cpp -o tmp/src/gui/dwi/render_frame_moc.o (187/548) [CC] tmp/src/gui/mrview/tool/odf/odf.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/odf/odf.cpp -o tmp/src/gui/mrview/tool/odf/odf.o (188/548) [MOC] tmp/src/gui/mrview/tool/connectome/connectome_moc.cpp moc src/gui/mrview/tool/connectome/connectome.h -o tmp/src/gui/mrview/tool/connectome/connectome_moc.cpp (189/548) [CC] tmp/src/gui/mrview/tool/connectome/connectome_moc.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/tool/connectome/connectome_moc.cpp -o tmp/src/gui/mrview/tool/connectome/connectome_moc.o (190/548) [MOC] tmp/src/gui/mrview/tool/connectome/selection_moc.cpp moc src/gui/mrview/tool/connectome/selection.h -o tmp/src/gui/mrview/tool/connectome/selection_moc.cpp (191/548) [CC] tmp/src/gui/mrview/tool/connectome/selection_moc.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/tool/connectome/selection_moc.cpp -o tmp/src/gui/mrview/tool/connectome/selection_moc.o (192/548) [CC] tmp/src/gui/mrview/tool/connectome/connectome.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/connectome/connectome.cpp -o tmp/src/gui/mrview/tool/connectome/connectome.o (193/548) [CC] tmp/src/gui/mrview/tool/view.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/view.cpp -o tmp/src/gui/mrview/tool/view.o (194/548) [CC] tmp/src/gui/mrview/mode/base.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/mode/base.cpp -o tmp/src/gui/mrview/mode/base.o (195/548) [CC] tmp/src/gui/mrview/tool/connectome/node_overlay.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/connectome/node_overlay.cpp -o tmp/src/gui/mrview/tool/connectome/node_overlay.o (196/548) [CC] tmp/src/gui/mrview/sync/syncmanager.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/sync/syncmanager.cpp -o tmp/src/gui/mrview/sync/syncmanager.o (197/548) [CC] tmp/cmd/mrview.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ cmd/mrview.cpp -o tmp/cmd/mrview.o (198/548) [CC] tmp/src/gui/opengl/shader.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/opengl/shader.cpp -o tmp/src/gui/opengl/shader.o (199/548) [CC] tmp/src/gui/mrview/combo_box_error.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/combo_box_error.cpp -o tmp/src/gui/mrview/combo_box_error.o (200/548) [CC] tmp/src/gui/dialog/list.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/dialog/list.cpp -o tmp/src/gui/dialog/list.o (201/548) [MOC] tmp/src/gui/mrview/window_moc.cpp moc src/gui/mrview/window.h -o tmp/src/gui/mrview/window_moc.cpp (202/548) [CC] tmp/src/gui/mrview/window_moc.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/window_moc.cpp -o tmp/src/gui/mrview/window_moc.o (203/548) [CC] tmp/src/gui/mrview/tool/screen_capture.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/screen_capture.cpp -o tmp/src/gui/mrview/tool/screen_capture.o (204/548) [CC] tmp/src/gui/projection.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/projection.cpp -o tmp/src/gui/projection.o (205/548) [CC] tmp/src/gui/mrview/tool/connectome/edge.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/connectome/edge.cpp -o tmp/src/gui/mrview/tool/connectome/edge.o (206/548) [CC] tmp/src/gui/mrview/sync/localsocketreader.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/sync/localsocketreader.cpp -o tmp/src/gui/mrview/sync/localsocketreader.o (207/548) [MOC] tmp/src/gui/mrview/tool/odf/odf_moc.cpp moc src/gui/mrview/tool/odf/odf.h -o tmp/src/gui/mrview/tool/odf/odf_moc.cpp (208/548) [CC] tmp/src/gui/mrview/tool/odf/odf_moc.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/tool/odf/odf_moc.cpp -o tmp/src/gui/mrview/tool/odf/odf_moc.o (209/548) [MOC] tmp/src/gui/mrview/tool/odf/preview_moc.cpp moc src/gui/mrview/tool/odf/preview.h -o tmp/src/gui/mrview/tool/odf/preview_moc.cpp (210/548) [CC] tmp/src/gui/mrview/tool/odf/preview_moc.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/tool/odf/preview_moc.cpp -o tmp/src/gui/mrview/tool/odf/preview_moc.o (211/548) [CC] tmp/src/gui/mrview/tool/fixel/directory.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/fixel/directory.cpp -o tmp/src/gui/mrview/tool/fixel/directory.o (212/548) [CC] tmp/src/gui/mrview/mode/slice.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/mode/slice.cpp -o tmp/src/gui/mrview/mode/slice.o (213/548) [CC] tmp/src/gui/mrview/mode/ortho.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/mode/ortho.cpp -o tmp/src/gui/mrview/mode/ortho.o (214/548) [LB] bin/mrtransform g++ tmp/src/exec_version.o tmp/src/dwi/directions/predefined.o tmp/cmd/mrtransform.o tmp/src/registration/multi_contrast.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrtransform (215/548) [CC] tmp/src/gui/mrview/tool/overlay.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/overlay.cpp -o tmp/src/gui/mrview/tool/overlay.o (216/548) [CC] tmp/src/gui/shapes/cylinder.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/shapes/cylinder.cpp -o tmp/src/gui/shapes/cylinder.o (217/548) [MOC] tmp/src/gui/mrview/sync/interprocesscommunicator_moc.cpp moc src/gui/mrview/sync/interprocesscommunicator.h -o tmp/src/gui/mrview/sync/interprocesscommunicator_moc.cpp (218/548) [CC] tmp/src/gui/mrview/sync/interprocesscommunicator_moc.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/sync/interprocesscommunicator_moc.cpp -o tmp/src/gui/mrview/sync/interprocesscommunicator_moc.o (219/548) [CC] tmp/src/gui/mrview/mode/lightbox.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/mode/lightbox.cpp -o tmp/src/gui/mrview/mode/lightbox.o (220/548) [CC] tmp/src/gui/mrview/tool/fixel/fixel.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/fixel/fixel.cpp -o tmp/src/gui/mrview/tool/fixel/fixel.o (221/548) [MOC] tmp/src/gui/lighting_dock_moc.cpp moc src/gui/lighting_dock.h -o tmp/src/gui/lighting_dock_moc.cpp (222/548) [CC] tmp/src/gui/lighting_dock_moc.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/lighting_dock_moc.cpp -o tmp/src/gui/lighting_dock_moc.o (223/548) [CC] tmp/src/gui/mrview/tool/fixel/base_fixel.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/fixel/base_fixel.cpp -o tmp/src/gui/mrview/tool/fixel/base_fixel.o (224/548) [CC] tmp/src/gui/lighting_dock.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/lighting_dock.cpp -o tmp/src/gui/lighting_dock.o (225/548) [CC] tmp/src/gui/mrview/gui_image.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/gui_image.cpp -o tmp/src/gui/mrview/gui_image.o (226/548) [CC] tmp/src/gui/mrview/tool/roi_editor/undoentry.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/roi_editor/undoentry.cpp -o tmp/src/gui/mrview/tool/roi_editor/undoentry.o (227/548) [MOC] tmp/src/gui/dialog/image_properties_moc.cpp moc src/gui/dialog/image_properties.h -o tmp/src/gui/dialog/image_properties_moc.cpp (228/548) [CC] tmp/src/gui/dialog/image_properties_moc.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/dialog/image_properties_moc.cpp -o tmp/src/gui/dialog/image_properties_moc.o (229/548) [CC] tmp/src/gui/shapes/halfsphere.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/shapes/halfsphere.cpp -o tmp/src/gui/shapes/halfsphere.o (230/548) [CC] tmp/src/gui/opengl/gl.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/opengl/gl.cpp -o tmp/src/gui/opengl/gl.o /build/reproducible-path/mrtrix3-3.0.8/./build:755: DeprecationWarning: codecs.open() is deprecated. Use open() instead. with codecs.open (self.cmd[1], mode='w', encoding='utf-8') as fd: (231/548) [RCC] tmp/src/gui/mrview/icons.cpp rcc icons/mrview.qrc -o tmp/src/gui/mrview/icons.cpp (232/548) [CC] tmp/src/gui/mrview/icons.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/icons.cpp -o tmp/src/gui/mrview/icons.o (233/548) [CC] tmp/src/gui/mrview/tool/connectome/file_data_vector.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/connectome/file_data_vector.cpp -o tmp/src/gui/mrview/tool/connectome/file_data_vector.o (234/548) [CC] tmp/src/gui/mrview/displayable.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/displayable.cpp -o tmp/src/gui/mrview/displayable.o (235/548) [CC] tmp/src/gui/dwi/renderer.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/dwi/renderer.cpp -o tmp/src/gui/dwi/renderer.o (236/548) [MOC] tmp/src/gui/mrview/adjust_button_moc.cpp moc src/gui/mrview/adjust_button.h -o tmp/src/gui/mrview/adjust_button_moc.cpp (237/548) [CC] tmp/src/gui/mrview/adjust_button_moc.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/adjust_button_moc.cpp -o tmp/src/gui/mrview/adjust_button_moc.o (238/548) [CC] tmp/src/gui/mrview/tool/fixel/image4D.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/fixel/image4D.cpp -o tmp/src/gui/mrview/tool/fixel/image4D.o (239/548) [CC] tmp/src/gui/mrview/window.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/window.cpp -o tmp/src/gui/mrview/window.o (240/548) [CC] tmp/src/gui/mrview/tool/fixel/legacy.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/fixel/legacy.cpp -o tmp/src/gui/mrview/tool/fixel/legacy.o (241/548) [MOC] tmp/src/gui/mrview/displayable_moc.cpp moc src/gui/mrview/displayable.h -o tmp/src/gui/mrview/displayable_moc.cpp (242/548) [CC] tmp/src/gui/mrview/displayable_moc.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/displayable_moc.cpp -o tmp/src/gui/mrview/displayable_moc.o (243/548) [MOC] tmp/src/gui/mrview/tool/screen_capture_moc.cpp moc src/gui/mrview/tool/screen_capture.h -o tmp/src/gui/mrview/tool/screen_capture_moc.cpp (244/548) [CC] tmp/src/gui/mrview/tool/screen_capture_moc.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/tool/screen_capture_moc.cpp -o tmp/src/gui/mrview/tool/screen_capture_moc.o (245/548) [CC] tmp/src/gui/gui.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/gui.cpp -o tmp/src/gui/gui.o (246/548) [CC] tmp/src/gui/mrview/colourbars.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/colourbars.cpp -o tmp/src/gui/mrview/colourbars.o (247/548) [CC] tmp/src/gui/dwi/render_frame.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/dwi/render_frame.cpp -o tmp/src/gui/dwi/render_frame.o (248/548) [CC] tmp/src/gui/mrview/file_open.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/file_open.cpp -o tmp/src/gui/mrview/file_open.o (249/548) [CC] tmp/src/gui/mrview/tool/transform.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/transform.cpp -o tmp/src/gui/mrview/tool/transform.o (250/548) [CC] tmp/src/gui/mrview/tool/roi_editor/roi.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/roi_editor/roi.cpp -o tmp/src/gui/mrview/tool/roi_editor/roi.o (251/548) [CC] tmp/src/gui/mrview/tool/odf/preview.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/odf/preview.cpp -o tmp/src/gui/mrview/tool/odf/preview.o (252/548) [CC] tmp/src/gui/mrview/colourmap_button.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/colourmap_button.cpp -o tmp/src/gui/mrview/colourmap_button.o (253/548) [CC] tmp/src/gui/mrview/tool/base.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/base.cpp -o tmp/src/gui/mrview/tool/base.o (254/548) [MOC] tmp/src/gui/color_button_moc.cpp moc src/gui/color_button.h -o tmp/src/gui/color_button_moc.cpp (255/548) [CC] tmp/src/gui/color_button_moc.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/color_button_moc.cpp -o tmp/src/gui/color_button_moc.o (256/548) [MOC] tmp/src/gui/opengl/lighting_moc.cpp moc src/gui/opengl/lighting.h -o tmp/src/gui/opengl/lighting_moc.cpp (257/548) [CC] tmp/src/gui/opengl/lighting_moc.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/opengl/lighting_moc.cpp -o tmp/src/gui/opengl/lighting_moc.o (258/548) [CC] tmp/src/surface/mesh_multi.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/surface/mesh_multi.cpp -o tmp/src/surface/mesh_multi.o (259/548) [CC] tmp/src/gui/mrview/tool/roi_editor/model.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/roi_editor/model.cpp -o tmp/src/gui/mrview/tool/roi_editor/model.o (260/548) [CC] tmp/src/gui/mrview/tool/odf/item.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/odf/item.cpp -o tmp/src/gui/mrview/tool/odf/item.o (261/548) [CC] tmp/src/colourmap.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/colourmap.cpp -o tmp/src/colourmap.o (262/548) [CC] tmp/src/gui/opengl/font.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/opengl/font.cpp -o tmp/src/gui/opengl/font.o (263/548) [MOC] tmp/src/gui/mrview/tool/tractography/track_scalar_file_moc.cpp moc src/gui/mrview/tool/tractography/track_scalar_file.h -o tmp/src/gui/mrview/tool/tractography/track_scalar_file_moc.cpp (264/548) [CC] tmp/src/gui/mrview/tool/tractography/track_scalar_file_moc.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/tool/tractography/track_scalar_file_moc.cpp -o tmp/src/gui/mrview/tool/tractography/track_scalar_file_moc.o (265/548) [MOC] tmp/src/gui/mrview/combo_box_error_moc.cpp moc src/gui/mrview/combo_box_error.h -o tmp/src/gui/mrview/combo_box_error_moc.cpp (266/548) [CC] tmp/src/gui/mrview/combo_box_error_moc.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/combo_box_error_moc.cpp -o tmp/src/gui/mrview/combo_box_error_moc.o (267/548) [CC] tmp/src/gui/dialog/progress.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/dialog/progress.cpp -o tmp/src/gui/dialog/progress.o (268/548) [MOC] tmp/src/gui/mrview/mode/lightbox_moc.cpp moc src/gui/mrview/mode/lightbox.h -o tmp/src/gui/mrview/mode/lightbox_moc.cpp (269/548) [CC] tmp/src/gui/mrview/mode/lightbox_moc.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/mode/lightbox_moc.cpp -o tmp/src/gui/mrview/mode/lightbox_moc.o (270/548) [MOC] tmp/src/gui/mrview/tool/connectome/node_list_moc.cpp moc src/gui/mrview/tool/connectome/node_list.h -o tmp/src/gui/mrview/tool/connectome/node_list_moc.cpp (271/548) [CC] tmp/src/gui/mrview/tool/connectome/node_list_moc.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/tool/connectome/node_list_moc.cpp -o tmp/src/gui/mrview/tool/connectome/node_list_moc.o (272/548) [CC] tmp/src/gui/mrview/tool/tractography/tractogram.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/tractography/tractogram.cpp -o tmp/src/gui/mrview/tool/tractography/tractogram.o (273/548) [MOC] tmp/src/gui/mrview/tool/roi_editor/roi_moc.cpp moc src/gui/mrview/tool/roi_editor/roi.h -o tmp/src/gui/mrview/tool/roi_editor/roi_moc.cpp (274/548) [CC] tmp/src/gui/mrview/tool/roi_editor/roi_moc.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/tool/roi_editor/roi_moc.cpp -o tmp/src/gui/mrview/tool/roi_editor/roi_moc.o (275/548) [MOC] tmp/src/gui/mrview/tool/overlay_moc.cpp moc src/gui/mrview/tool/overlay.h -o tmp/src/gui/mrview/tool/overlay_moc.cpp (276/548) [CC] tmp/src/gui/mrview/tool/overlay_moc.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/tool/overlay_moc.cpp -o tmp/src/gui/mrview/tool/overlay_moc.o (277/548) [MOC] tmp/src/gui/mrview/tool/tractography/tractography_moc.cpp moc src/gui/mrview/tool/tractography/tractography.h -o tmp/src/gui/mrview/tool/tractography/tractography_moc.cpp (278/548) [CC] tmp/src/gui/mrview/tool/tractography/tractography_moc.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/tool/tractography/tractography_moc.cpp -o tmp/src/gui/mrview/tool/tractography/tractography_moc.o (279/548) [CC] tmp/src/gui/shapes/sphere.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/shapes/sphere.cpp -o tmp/src/gui/shapes/sphere.o (280/548) [CC] tmp/src/gui/mrview/tool/tractography/tractography.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/tractography/tractography.cpp -o tmp/src/gui/mrview/tool/tractography/tractography.o (281/548) [CC] tmp/src/gui/mrview/sync/processlock.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/sync/processlock.cpp -o tmp/src/gui/mrview/sync/processlock.o (282/548) [CC] tmp/src/gui/mrview/tool/connectome/shaders.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/tool/connectome/shaders.cpp -o tmp/src/gui/mrview/tool/connectome/shaders.o (283/548) [CC] tmp/src/gui/dialog/report_exception.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/dialog/report_exception.cpp -o tmp/src/gui/dialog/report_exception.o (284/548) [CC] tmp/src/gui/dialog/image_properties.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/dialog/image_properties.cpp -o tmp/src/gui/dialog/image_properties.o (285/548) [CC] tmp/src/gui/mrview/sync/interprocesscommunicator.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/mrview/sync/interprocesscommunicator.cpp -o tmp/src/gui/mrview/sync/interprocesscommunicator.o (286/548) [CC] tmp/cmd/mrclusterstats.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrclusterstats.cpp -o tmp/cmd/mrclusterstats.o (287/548) [CC] tmp/src/stats/permtest.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/stats/permtest.cpp -o tmp/src/stats/permtest.o (288/548) [CC] tmp/src/stats/cluster.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/stats/cluster.cpp -o tmp/src/stats/cluster.o (289/548) [CC] tmp/src/stats/tfce.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/stats/tfce.cpp -o tmp/src/stats/tfce.o (290/548) [CC] tmp/cmd/fixelcrop.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/fixelcrop.cpp -o tmp/cmd/fixelcrop.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/stats/cluster.cpp -o tmp/src/stats/cluster.o: In file included from src/stats/tfce.h:24, from src/stats/cluster.h:23, from src/stats/cluster.cpp:17: src/stats/enhance.h:49:22: warning: ‘virtual void MR::Stats::EnhancerBase::operator()(in_column_type, out_column_type) const’ was hidden [-Woverloaded-virtual=] 49 | virtual void operator() (in_column_type, out_column_type) const = 0; | ^~~~~~~~ src/stats/tfce.h:51:24: note: by ‘virtual void MR::Stats::TFCE::EnhancerBase::operator()(MR::Stats::EnhancerBase::in_column_type, MR::Stats::TFCE::value_type, MR::Stats::EnhancerBase::out_column_type) const’ 51 | virtual void operator() (in_column_type /*input_statistics*/, const value_type /*threshold*/, out_column_type /*enhanced_statistics*/) const = 0; | ^~~~~~~~ (291/548) [CC] tmp/cmd/fixelreorient.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/fixelreorient.cpp -o tmp/cmd/fixelreorient.o (292/548) [CC] tmp/cmd/dirmerge.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/dirmerge.cpp -o tmp/cmd/dirmerge.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/stats/tfce.cpp -o tmp/src/stats/tfce.o: In file included from src/stats/tfce.h:24, from src/stats/tfce.cpp:17: src/stats/enhance.h:49:22: warning: ‘virtual void MR::Stats::EnhancerBase::operator()(in_column_type, out_column_type) const’ was hidden [-Woverloaded-virtual=] 49 | virtual void operator() (in_column_type, out_column_type) const = 0; | ^~~~~~~~ src/stats/tfce.h:51:24: note: by ‘virtual void MR::Stats::TFCE::EnhancerBase::operator()(MR::Stats::EnhancerBase::in_column_type, MR::Stats::TFCE::value_type, MR::Stats::EnhancerBase::out_column_type) const’ 51 | virtual void operator() (in_column_type /*input_statistics*/, const value_type /*threshold*/, out_column_type /*enhanced_statistics*/) const = 0; | ^~~~~~~~ (293/548) [CC] tmp/cmd/peaks2amp.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/peaks2amp.cpp -o tmp/cmd/peaks2amp.o (294/548) [CC] tmp/cmd/5ttedit.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/5ttedit.cpp -o tmp/cmd/5ttedit.o (295/548) [CC] tmp/src/dwi/tractography/ACT/act.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/ACT/act.cpp -o tmp/src/dwi/tractography/ACT/act.o (296/548) [LB] bin/mrview g++ tmp/src/gui/mrview/tool/connectome/colourmap_observers.o tmp/src/gui/mrview/tool/transform_moc.o tmp/src/gui/dialog/file.o tmp/src/gui/opengl/gl_core_3_3.o tmp/src/gui/mrview/adjust_button.o tmp/src/gui/mrview/mode/volume.o tmp/src/gui/opengl/lighting.o tmp/src/gui/cursor.o tmp/src/gui/color_button.o tmp/src/gui/mrview/volume.o tmp/src/gui/mrview/tool/connectome/matrix_list.o tmp/src/gui/mrview/sync/client.o tmp/src/gui/mrview/sync/syncmanager_moc.o tmp/src/gui/mrview/tool/connectome/node_list.o tmp/src/dwi/tractography/properties.o tmp/src/gui/mrview/spin_box_moc.o tmp/src/gui/mrview/tool/connectome/node.o tmp/src/gui/mrview/tool/tractography/track_scalar_file.o tmp/src/gui/dialog/opengl.o tmp/src/gui/mrview/tool/connectome/selection.o tmp/src/gui/mrview/tool/view_moc.o tmp/src/gui/mrview/sync/localsocketreader_moc.o tmp/src/gui/dialog/dicom.o tmp/src/gui/shapes/cube.o tmp/src/gui/mrview/tool/fixel/fixel_moc.o tmp/src/gui/mrview/mode/ortho_moc.o tmp/src/gui/mrview/colourmap_button_moc.o tmp/src/gui/mrview/tool/roi_editor/item.o tmp/src/gui/mrview/tool/tractography/tractogram_moc.o tmp/src/gui/crosshair.o tmp/src/gui/mrview/tool/odf/model.o tmp/src/surface/freesurfer.o tmp/src/gui/dialog/dialog.o tmp/src/exec_version.o tmp/src/dwi/tractography/seeding/list.o tmp/src/gui/dwi/render_frame_moc.o tmp/src/gui/mrview/tool/odf/odf.o tmp/src/gui/mrview/tool/connectome/connectome_moc.o tmp/src/gui/mrview/tool/connectome/selection_moc.o tmp/src/gui/mrview/tool/connectome/connectome.o tmp/src/gui/mrview/tool/view.o tmp/src/gui/mrview/mode/base.o tmp/src/gui/mrview/tool/connectome/node_overlay.o tmp/src/gui/mrview/sync/syncmanager.o tmp/cmd/mrview.o tmp/src/gui/opengl/shader.o tmp/src/gui/mrview/combo_box_error.o tmp/src/gui/dialog/list.o tmp/src/gui/mrview/window_moc.o tmp/src/gui/mrview/tool/screen_capture.o tmp/src/gui/projection.o tmp/src/gui/mrview/tool/connectome/edge.o tmp/src/gui/mrview/sync/localsocketreader.o tmp/src/gui/mrview/tool/odf/odf_moc.o tmp/src/gui/mrview/tool/odf/preview_moc.o tmp/src/gui/mrview/tool/fixel/directory.o tmp/src/gui/mrview/mode/slice.o tmp/src/gui/mrview/mode/ortho.o tmp/src/gui/mrview/tool/overlay.o tmp/src/gui/shapes/cylinder.o tmp/src/dwi/tractography/file_base.o tmp/src/gui/mrview/sync/interprocesscommunicator_moc.o tmp/src/gui/mrview/mode/lightbox.o tmp/src/gui/mrview/tool/fixel/fixel.o tmp/src/gui/lighting_dock_moc.o tmp/src/gui/mrview/tool/fixel/base_fixel.o tmp/src/gui/lighting_dock.o tmp/src/gui/mrview/gui_image.o tmp/src/gui/mrview/tool/roi_editor/undoentry.o tmp/src/gui/dialog/image_properties_moc.o tmp/src/gui/shapes/halfsphere.o tmp/src/gui/opengl/gl.o tmp/src/gui/mrview/icons.o tmp/src/gui/mrview/tool/connectome/file_data_vector.o tmp/src/gui/mrview/displayable.o tmp/src/gui/dwi/renderer.o tmp/src/dwi/directions/predefined.o tmp/src/gui/mrview/adjust_button_moc.o tmp/src/connectome/connectome.o tmp/src/connectome/lut.o tmp/src/gui/mrview/tool/fixel/image4D.o tmp/src/gui/mrview/window.o tmp/src/gui/mrview/tool/fixel/legacy.o tmp/src/gui/mrview/displayable_moc.o tmp/src/gui/mrview/tool/screen_capture_moc.o tmp/src/gui/gui.o tmp/src/gui/mrview/colourbars.o tmp/src/dwi/tractography/rng.o tmp/src/gui/dwi/render_frame.o tmp/src/gui/mrview/file_open.o tmp/src/dwi/directions/set.o tmp/src/gui/mrview/tool/transform.o tmp/src/gui/mrview/tool/roi_editor/roi.o tmp/src/surface/scalar.o tmp/src/gui/mrview/tool/odf/preview.o tmp/src/gui/mrview/colourmap_button.o tmp/src/gui/mrview/tool/base.o tmp/src/gui/color_button_moc.o tmp/src/gui/opengl/lighting_moc.o tmp/src/surface/polygon.o tmp/src/surface/mesh_multi.o tmp/src/gui/mrview/tool/roi_editor/model.o tmp/src/gui/mrview/tool/odf/item.o tmp/src/colourmap.o tmp/src/gui/opengl/font.o tmp/src/gui/mrview/tool/tractography/track_scalar_file_moc.o tmp/src/gui/mrview/combo_box_error_moc.o tmp/src/gui/dialog/progress.o tmp/src/gui/mrview/mode/lightbox_moc.o tmp/src/gui/mrview/tool/connectome/node_list_moc.o tmp/src/gui/mrview/tool/tractography/tractogram.o tmp/src/gui/mrview/tool/roi_editor/roi_moc.o tmp/src/gui/mrview/tool/overlay_moc.o tmp/src/gui/mrview/tool/tractography/tractography_moc.o tmp/src/gui/shapes/sphere.o tmp/src/gui/mrview/tool/tractography/tractography.o tmp/src/gui/mrview/sync/processlock.o tmp/src/surface/mesh.o tmp/src/gui/mrview/tool/connectome/shaders.o tmp/src/gui/dialog/report_exception.o tmp/src/dwi/tractography/roi.o tmp/src/gui/dialog/image_properties.o tmp/src/gui/mrview/sync/interprocesscommunicator.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib /usr/lib/aarch64-linux-gnu/libQt5OpenGL.so /usr/lib/aarch64-linux-gnu/libQt5Svg.so /usr/lib/aarch64-linux-gnu/libQt5Widgets.so /usr/lib/aarch64-linux-gnu/libQt5Gui.so /usr/lib/aarch64-linux-gnu/libQt5Network.so /usr/lib/aarch64-linux-gnu/libQt5Core.so -lGL -lpthread -o bin/mrview (297/548) [LB] bin/dirmerge g++ tmp/src/exec_version.o tmp/src/dwi/directions/file.o tmp/cmd/dirmerge.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dirmerge (298/548) [CC] tmp/cmd/warp2metric.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/warp2metric.cpp -o tmp/cmd/warp2metric.o (299/548) [CC] tmp/cmd/dirflip.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/dirflip.cpp -o tmp/cmd/dirflip.o (300/548) [CC] tmp/cmd/mrdegibbs.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrdegibbs.cpp -o tmp/cmd/mrdegibbs.o (301/548) [LB] bin/peaks2amp g++ tmp/src/exec_version.o tmp/cmd/peaks2amp.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/peaks2amp (302/548) [CC] tmp/src/dwi/tractography/editing/receiver.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/editing/receiver.cpp -o tmp/src/dwi/tractography/editing/receiver.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrclusterstats.cpp -o tmp/cmd/mrclusterstats.o: In file included from src/stats/tfce.h:24, from src/stats/cluster.h:23, from cmd/mrclusterstats.cpp:30: src/stats/enhance.h:49:22: warning: ‘virtual void MR::Stats::EnhancerBase::operator()(in_column_type, out_column_type) const’ was hidden [-Woverloaded-virtual=] 49 | virtual void operator() (in_column_type, out_column_type) const = 0; | ^~~~~~~~ src/stats/tfce.h:51:24: note: by ‘virtual void MR::Stats::TFCE::EnhancerBase::operator()(MR::Stats::EnhancerBase::in_column_type, MR::Stats::TFCE::value_type, MR::Stats::EnhancerBase::out_column_type) const’ 51 | virtual void operator() (in_column_type /*input_statistics*/, const value_type /*threshold*/, out_column_type /*enhanced_statistics*/) const = 0; | ^~~~~~~~ (303/548) [LB] bin/mrclusterstats g++ tmp/src/exec_version.o tmp/cmd/mrclusterstats.o tmp/src/stats/permtest.o tmp/src/stats/cluster.o tmp/src/stats/tfce.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrclusterstats (304/548) [CC] tmp/src/dwi/tractography/editing/editing.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/editing/editing.cpp -o tmp/src/dwi/tractography/editing/editing.o (305/548) [LB] bin/5ttedit g++ tmp/cmd/5ttedit.o tmp/src/exec_version.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/ACT/act.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/5ttedit (306/548) [CC] tmp/src/dwi/tractography/editing/worker.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/editing/worker.cpp -o tmp/src/dwi/tractography/editing/worker.o (307/548) [LB] bin/dirflip g++ tmp/src/exec_version.o tmp/src/dwi/directions/file.o tmp/cmd/dirflip.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dirflip (308/548) [CC] tmp/cmd/tckedit.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tckedit.cpp -o tmp/cmd/tckedit.o (309/548) [CC] tmp/cmd/shbasis.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/shbasis.cpp -o tmp/cmd/shbasis.o (310/548) [LB] bin/fixelcrop g++ tmp/src/exec_version.o tmp/cmd/fixelcrop.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/fixelcrop (311/548) [CC] tmp/cmd/warpcorrect.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/warpcorrect.cpp -o tmp/cmd/warpcorrect.o (312/548) [CC] tmp/src/fixel/filter/smooth.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/fixel/filter/smooth.cpp -o tmp/src/fixel/filter/smooth.o (313/548) [LB] bin/mrdegibbs g++ tmp/src/exec_version.o tmp/cmd/mrdegibbs.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrdegibbs (314/548) [CC] tmp/src/stats/cfe.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/stats/cfe.cpp -o tmp/src/stats/cfe.o (315/548) [LB] bin/fixelreorient g++ tmp/cmd/fixelreorient.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/fixelreorient (316/548) [CC] tmp/cmd/fixelcfestats.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/fixelcfestats.cpp -o tmp/cmd/fixelcfestats.o (317/548) [CC] tmp/src/fixel/matrix.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/fixel/matrix.cpp -o tmp/src/fixel/matrix.o (318/548) [LB] bin/tckedit g++ tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/seeding/list.o tmp/src/exec_version.o tmp/src/dwi/tractography/weights.o tmp/src/dwi/tractography/editing/receiver.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/editing/editing.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/editing/worker.o tmp/cmd/tckedit.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tckedit (319/548) [CC] tmp/src/fixel/index_remapper.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/fixel/index_remapper.cpp -o tmp/src/fixel/index_remapper.o (320/548) [CC] tmp/cmd/mredit.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mredit.cpp -o tmp/cmd/mredit.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/warpcorrect.cpp -o tmp/cmd/warpcorrect.o: In copy constructor ‘constexpr BoundsCheck::BoundsCheck(const BoundsCheck&)’, inlined from ‘MR::{anonymous}::ThreadedLoopRunInner::ThreadedLoopRunInner(const MR::vector&, const MR::vector&, const Functor&, ImageType& ...) [with int N = 2; Functor = BoundsCheck; ImageType = {MR::Image, MR::Image}]’ at ./core/algo/threaded_loop.h:276:11, inlined from ‘void MR::{anonymous}::ThreadedLoopRunOuter::run(Functor&&, ImageType&& ...) [with Functor = BoundsCheck&; ImageType = {MR::Image&, MR::Image&}; OuterLoopType = MR::LoopAlongDynamicAxesProgress]’ at ./core/algo/threaded_loop.h:376:19, inlined from ‘void run()’ at cmd/warpcorrect.cpp:113:10: cmd/warpcorrect.cpp:53:7: warning: ‘func.BoundsCheck::val’ may be used uninitialized [-Wmaybe-uninitialized] 53 | class BoundsCheck { MEMALIGN(BoundsCheck) | ^~~~~~~~~~~ cmd/warpcorrect.cpp: In function ‘void run()’: cmd/warpcorrect.cpp:110:8: note: ‘func’ declared here 110 | auto func = BoundsCheck (precision, oob_vector, count); | ^~~~ (321/548) [LB] bin/warpcorrect g++ tmp/src/exec_version.o tmp/cmd/warpcorrect.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/warpcorrect (322/548) [CC] tmp/cmd/vectorstats.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/vectorstats.cpp -o tmp/cmd/vectorstats.o (323/548) [CC] tmp/cmd/5ttcheck.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/5ttcheck.cpp -o tmp/cmd/5ttcheck.o (324/548) [LB] bin/warp2metric g++ tmp/src/exec_version.o tmp/cmd/warp2metric.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/warp2metric (325/548) [CC] tmp/cmd/dwi2tensor.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/dwi2tensor.cpp -o tmp/cmd/dwi2tensor.o (326/548) [CC] tmp/cmd/maskdump.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/maskdump.cpp -o tmp/cmd/maskdump.o (327/548) [LB] bin/mredit g++ tmp/src/exec_version.o tmp/cmd/mredit.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mredit (328/548) [CC] tmp/cmd/transformcompose.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/transformcompose.cpp -o tmp/cmd/transformcompose.o (329/548) [LB] bin/vectorstats g++ tmp/src/exec_version.o tmp/cmd/vectorstats.o tmp/src/stats/permtest.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/vectorstats (330/548) [LB] bin/5ttcheck g++ tmp/src/exec_version.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/seeding/list.o tmp/cmd/5ttcheck.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/ACT/act.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/5ttcheck (331/548) [CC] tmp/cmd/maskfilter.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/maskfilter.cpp -o tmp/cmd/maskfilter.o (332/548) [CC] tmp/cmd/amp2sh.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/amp2sh.cpp -o tmp/cmd/amp2sh.o (333/548) [LB] bin/shbasis g++ tmp/src/exec_version.o tmp/cmd/shbasis.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/shbasis (334/548) [CC] tmp/cmd/5tt2vis.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/5tt2vis.cpp -o tmp/cmd/5tt2vis.o (335/548) [LB] bin/maskdump g++ tmp/src/exec_version.o tmp/cmd/maskdump.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/maskdump (336/548) [CC] tmp/cmd/mrcalc.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrcalc.cpp -o tmp/cmd/mrcalc.o (337/548) [LB] bin/5tt2vis g++ tmp/src/exec_version.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/roi.o tmp/cmd/5tt2vis.o tmp/src/dwi/tractography/ACT/act.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/5tt2vis (338/548) [CC] tmp/src/connectome/enhance.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/connectome/enhance.cpp -o tmp/src/connectome/enhance.o (339/548) [CC] tmp/cmd/connectomeedit.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/connectomeedit.cpp -o tmp/cmd/connectomeedit.o (340/548) [LB] bin/transformcompose g++ tmp/src/exec_version.o tmp/cmd/transformcompose.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/transformcompose (341/548) [LB] bin/fixelcfestats g++ tmp/src/dwi/tractography/mapping/voxel.o tmp/src/dwi/tractography/mapping/mapper_plugins.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/directions/predefined.o tmp/src/stats/permtest.o tmp/src/fixel/filter/smooth.o tmp/src/stats/cfe.o tmp/src/dwi/tractography/mapping/mapper.o tmp/cmd/fixelcfestats.o tmp/src/dwi/tractography/mapping/mapping.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/directions/set.o tmp/src/dwi/tractography/seeding/list.o tmp/src/exec_version.o tmp/src/dwi/tractography/resampling/endpoints.o tmp/src/dwi/tractography/resampling/downsampler.o tmp/src/dwi/tractography/resampling/upsampler.o tmp/src/fixel/matrix.o tmp/src/fixel/index_remapper.o tmp/src/dwi/tractography/resampling/resampling.o tmp/src/dwi/tractography/resampling/fixed_step_size.o tmp/src/dwi/tractography/mapping/twi_stats.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/resampling/fixed_num_points.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/resampling/arc.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/fixelcfestats (342/548) [CC] tmp/cmd/mrconvert.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrconvert.cpp -o tmp/cmd/mrconvert.o (343/548) [CC] tmp/src/registration/transform/initialiser.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/registration/transform/initialiser.cpp -o tmp/src/registration/transform/initialiser.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/connectome/enhance.cpp -o tmp/src/connectome/enhance.o: In file included from src/connectome/enhance.h:26, from src/connectome/enhance.cpp:17: src/stats/enhance.h:49:22: warning: ‘virtual void MR::Stats::EnhancerBase::operator()(in_column_type, out_column_type) const’ was hidden [-Woverloaded-virtual=] 49 | virtual void operator() (in_column_type, out_column_type) const = 0; | ^~~~~~~~ In file included from src/connectome/enhance.h:27: src/stats/tfce.h:51:24: note: by ‘virtual void MR::Stats::TFCE::EnhancerBase::operator()(MR::Stats::EnhancerBase::in_column_type, MR::Stats::TFCE::value_type, MR::Stats::EnhancerBase::out_column_type) const’ 51 | virtual void operator() (in_column_type /*input_statistics*/, const value_type /*threshold*/, out_column_type /*enhanced_statistics*/) const = 0; | ^~~~~~~~ (344/548) [CC] tmp/src/registration/transform/affine.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/registration/transform/affine.cpp -o tmp/src/registration/transform/affine.o (345/548) [LB] bin/dwi2tensor g++ tmp/src/exec_version.o tmp/cmd/dwi2tensor.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dwi2tensor (346/548) [CC] tmp/src/registration/nonlinear.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/registration/nonlinear.cpp -o tmp/src/registration/nonlinear.o (347/548) [LB] bin/maskfilter g++ tmp/src/exec_version.o tmp/cmd/maskfilter.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/maskfilter g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/connectomeedit.cpp -o tmp/cmd/connectomeedit.o: In file included from src/connectome/enhance.h:26, from cmd/connectomeedit.cpp:18: src/stats/enhance.h:49:22: warning: ‘virtual void MR::Stats::EnhancerBase::operator()(in_column_type, out_column_type) const’ was hidden [-Woverloaded-virtual=] 49 | virtual void operator() (in_column_type, out_column_type) const = 0; | ^~~~~~~~ In file included from src/connectome/enhance.h:27: src/stats/tfce.h:51:24: note: by ‘virtual void MR::Stats::TFCE::EnhancerBase::operator()(MR::Stats::EnhancerBase::in_column_type, MR::Stats::TFCE::value_type, MR::Stats::EnhancerBase::out_column_type) const’ 51 | virtual void operator() (in_column_type /*input_statistics*/, const value_type /*threshold*/, out_column_type /*enhanced_statistics*/) const = 0; | ^~~~~~~~ (348/548) [LB] bin/connectomeedit g++ tmp/src/connectome/enhance.o tmp/src/exec_version.o tmp/cmd/connectomeedit.o tmp/src/connectome/connectome.o tmp/src/stats/tfce.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/connectomeedit (349/548) [CC] tmp/cmd/mrregister.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrregister.cpp -o tmp/cmd/mrregister.o (350/548) [CC] tmp/src/registration/transform/convergence_check.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/registration/transform/convergence_check.cpp -o tmp/src/registration/transform/convergence_check.o (351/548) [CC] tmp/src/registration/transform/initialiser_helpers.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/registration/transform/initialiser_helpers.cpp -o tmp/src/registration/transform/initialiser_helpers.o (352/548) [LB] bin/mrcalc g++ tmp/src/exec_version.o tmp/cmd/mrcalc.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrcalc (353/548) [CC] tmp/src/registration/transform/rigid.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/registration/transform/rigid.cpp -o tmp/src/registration/transform/rigid.o (354/548) [LB] bin/amp2sh g++ tmp/src/exec_version.o tmp/cmd/amp2sh.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/amp2sh (355/548) [CC] tmp/src/registration/linear.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/registration/linear.cpp -o tmp/src/registration/linear.o (356/548) [CC] tmp/src/fixel/filter/connect.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/fixel/filter/connect.cpp -o tmp/src/fixel/filter/connect.o (357/548) [CC] tmp/cmd/fixelfilter.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/fixelfilter.cpp -o tmp/cmd/fixelfilter.o (358/548) [CC] tmp/cmd/sh2peaks.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/sh2peaks.cpp -o tmp/cmd/sh2peaks.o (359/548) [LB] bin/mrconvert g++ tmp/src/exec_version.o tmp/cmd/mrconvert.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrconvert (360/548) [CC] tmp/cmd/mtnormalise.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mtnormalise.cpp -o tmp/cmd/mtnormalise.o (361/548) [CC] tmp/cmd/mrcheckerboardmask.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrcheckerboardmask.cpp -o tmp/cmd/mrcheckerboardmask.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/sh2peaks.cpp -o tmp/cmd/sh2peaks.o: In file included from cmd/sh2peaks.cpp:18: ./core/math/SH.h: In function ‘void MR::Math::SH::derivatives(const VectorType&, int, typename VectorType::Scalar, typename VectorType::Scalar, typename VectorType::Scalar&, typename VectorType::Scalar&, typename VectorType::Scalar&, typename VectorType::Scalar&, typename VectorType::Scalar&, typename VectorType::Scalar&, PrecomputedAL*) [with VectorType = Eigen::Matrix]’: ./core/math/SH.h:604:33: warning: ‘*AL.675[0]’ may be used uninitialized [-Wmaybe-uninitialized] 604 | amplitude = sh[0] * AL[0]; | ~~^ (362/548) [LB] bin/sh2peaks g++ tmp/src/exec_version.o tmp/cmd/sh2peaks.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/sh2peaks (363/548) [CC] tmp/cmd/mrstats.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrstats.cpp -o tmp/cmd/mrstats.o (364/548) [CC] tmp/cmd/fixelconvert.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/fixelconvert.cpp -o tmp/cmd/fixelconvert.o (365/548) [LB] bin/mrcheckerboardmask g++ tmp/src/exec_version.o tmp/cmd/mrcheckerboardmask.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrcheckerboardmask (366/548) [CC] tmp/cmd/tckstats.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tckstats.cpp -o tmp/cmd/tckstats.o (367/548) [LB] bin/fixelfilter g++ tmp/src/dwi/tractography/mapping/voxel.o tmp/src/dwi/tractography/mapping/mapper_plugins.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/directions/predefined.o tmp/src/stats/cfe.o tmp/src/fixel/filter/smooth.o tmp/src/dwi/tractography/mapping/mapper.o tmp/src/dwi/tractography/mapping/mapping.o tmp/src/fixel/filter/connect.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/directions/set.o tmp/src/dwi/tractography/seeding/list.o tmp/src/exec_version.o tmp/src/dwi/tractography/resampling/endpoints.o tmp/src/dwi/tractography/resampling/downsampler.o tmp/src/dwi/tractography/resampling/upsampler.o tmp/src/fixel/matrix.o tmp/src/fixel/index_remapper.o tmp/cmd/fixelfilter.o tmp/src/dwi/tractography/resampling/resampling.o tmp/src/dwi/tractography/resampling/fixed_step_size.o tmp/src/dwi/tractography/mapping/twi_stats.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/resampling/fixed_num_points.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/resampling/arc.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/fixelfilter (368/548) [CC] tmp/cmd/mrcat.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrcat.cpp -o tmp/cmd/mrcat.o (369/548) [LB] bin/mrstats g++ tmp/src/exec_version.o tmp/cmd/mrstats.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrstats (370/548) [CC] tmp/cmd/mrmetric.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrmetric.cpp -o tmp/cmd/mrmetric.o (371/548) [LB] bin/tckstats g++ tmp/src/exec_version.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/properties.o tmp/cmd/tckstats.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/weights.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tckstats (372/548) [CC] tmp/cmd/sh2power.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/sh2power.cpp -o tmp/cmd/sh2power.o (373/548) [LB] bin/fixelconvert g++ tmp/src/exec_version.o tmp/cmd/fixelconvert.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/fixelconvert (374/548) [CC] tmp/cmd/dirgen.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/dirgen.cpp -o tmp/cmd/dirgen.o (375/548) [CC] tmp/cmd/shconv.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/shconv.cpp -o tmp/cmd/shconv.o (376/548) [LB] bin/sh2power g++ tmp/src/exec_version.o tmp/cmd/sh2power.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/sh2power (377/548) [CC] tmp/cmd/mrcentroid.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrcentroid.cpp -o tmp/cmd/mrcentroid.o (378/548) [LB] bin/mtnormalise g++ tmp/src/exec_version.o tmp/cmd/mtnormalise.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mtnormalise (379/548) [CC] tmp/cmd/label2colour.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/label2colour.cpp -o tmp/cmd/label2colour.o (380/548) [LB] bin/dirgen g++ tmp/src/exec_version.o tmp/src/dwi/directions/file.o tmp/cmd/dirgen.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dirgen (381/548) [CC] tmp/cmd/warpinit.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/warpinit.cpp -o tmp/cmd/warpinit.o (382/548) [LB] bin/mrcentroid g++ tmp/src/exec_version.o tmp/cmd/mrcentroid.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrcentroid (383/548) [CC] tmp/src/dwi/tractography/GT/externalenergy.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/GT/externalenergy.cpp -o tmp/src/dwi/tractography/GT/externalenergy.o (384/548) [LB] bin/shconv g++ tmp/src/exec_version.o tmp/cmd/shconv.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/shconv (385/548) [CC] tmp/src/dwi/tractography/GT/mhsampler.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/GT/mhsampler.cpp -o tmp/src/dwi/tractography/GT/mhsampler.o (386/548) [LB] bin/mrcat g++ tmp/src/exec_version.o tmp/cmd/mrcat.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrcat (387/548) [CC] tmp/src/dwi/tractography/GT/internalenergy.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/GT/internalenergy.cpp -o tmp/src/dwi/tractography/GT/internalenergy.o (388/548) [LB] bin/label2colour g++ tmp/src/exec_version.o tmp/src/connectome/connectome.o tmp/src/connectome/lut.o tmp/cmd/label2colour.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/label2colour (389/548) [CC] tmp/src/dwi/tractography/GT/particlegrid.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/GT/particlegrid.cpp -o tmp/src/dwi/tractography/GT/particlegrid.o (390/548) [LB] bin/warpinit g++ tmp/cmd/warpinit.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/warpinit (391/548) [CC] tmp/cmd/tckglobal.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tckglobal.cpp -o tmp/cmd/tckglobal.o (392/548) [CC] tmp/src/dwi/tractography/GT/particle.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/GT/particle.cpp -o tmp/src/dwi/tractography/GT/particle.o (393/548) [CC] tmp/src/dwi/tractography/GT/gt.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/GT/gt.cpp -o tmp/src/dwi/tractography/GT/gt.o (394/548) [CC] tmp/cmd/connectomestats.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/connectomestats.cpp -o tmp/cmd/connectomestats.o (395/548) [CC] tmp/cmd/tcksample.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tcksample.cpp -o tmp/cmd/tcksample.o (396/548) [CC] tmp/cmd/mrcolour.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrcolour.cpp -o tmp/cmd/mrcolour.o (397/548) [CC] tmp/cmd/dwi2adc.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/dwi2adc.cpp -o tmp/cmd/dwi2adc.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/connectomestats.cpp -o tmp/cmd/connectomestats.o: In file included from src/connectome/enhance.h:26, from cmd/connectomestats.cpp:28: src/stats/enhance.h:49:22: warning: ‘virtual void MR::Stats::EnhancerBase::operator()(in_column_type, out_column_type) const’ was hidden [-Woverloaded-virtual=] 49 | virtual void operator() (in_column_type, out_column_type) const = 0; | ^~~~~~~~ In file included from src/connectome/enhance.h:27: src/stats/tfce.h:51:24: note: by ‘virtual void MR::Stats::TFCE::EnhancerBase::operator()(MR::Stats::EnhancerBase::in_column_type, MR::Stats::TFCE::value_type, MR::Stats::EnhancerBase::out_column_type) const’ 51 | virtual void operator() (in_column_type /*input_statistics*/, const value_type /*threshold*/, out_column_type /*enhanced_statistics*/) const = 0; | ^~~~~~~~ (398/548) [LB] bin/connectomestats g++ tmp/src/connectome/enhance.o tmp/src/exec_version.o tmp/src/stats/permtest.o tmp/src/connectome/connectome.o tmp/src/stats/tfce.o tmp/cmd/connectomestats.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/connectomestats (399/548) [CC] tmp/cmd/dcminfo.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/dcminfo.cpp -o tmp/cmd/dcminfo.o (400/548) [LB] bin/mrcolour g++ tmp/src/exec_version.o tmp/src/colourmap.o tmp/cmd/mrcolour.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrcolour (401/548) [CC] tmp/cmd/mrhistogram.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrhistogram.cpp -o tmp/cmd/mrhistogram.o (402/548) [CC] tmp/cmd/connectome2tck.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/connectome2tck.cpp -o tmp/cmd/connectome2tck.o (403/548) [LB] bin/dcminfo g++ tmp/cmd/dcminfo.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dcminfo (404/548) [CC] tmp/src/dwi/tractography/connectome/exemplar.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/connectome/exemplar.cpp -o tmp/src/dwi/tractography/connectome/exemplar.o (405/548) [LB] bin/tckglobal g++ tmp/src/exec_version.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/GT/externalenergy.o tmp/src/dwi/tractography/GT/mhsampler.o tmp/src/dwi/tractography/GT/internalenergy.o tmp/src/dwi/tractography/GT/particlegrid.o tmp/cmd/tckglobal.o tmp/src/dwi/tractography/GT/particle.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/GT/gt.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/file_base.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tckglobal (406/548) [CC] tmp/src/dwi/tractography/connectome/extract.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/connectome/extract.cpp -o tmp/src/dwi/tractography/connectome/extract.o (407/548) [CC] tmp/cmd/transformcalc.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/transformcalc.cpp -o tmp/cmd/transformcalc.o (408/548) [LB] bin/mrhistogram g++ tmp/src/exec_version.o tmp/cmd/mrhistogram.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrhistogram (409/548) [CC] tmp/cmd/fod2fixel.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/fod2fixel.cpp -o tmp/cmd/fod2fixel.o (410/548) [CC] tmp/src/dwi/directions/mask.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/directions/mask.cpp -o tmp/src/dwi/directions/mask.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/dwi2adc.cpp -o tmp/cmd/dwi2adc.o: In file included from /usr/include/string.h:580, from /usr/include/c++/16/cstring:48, from ./core/app.h:20, from ./core/command.h:25, from cmd/dwi2adc.cpp:17: In function ‘void* memcpy(void*, const void*, size_t)’, inlined from ‘static void Eigen::internal::smart_copy_helper::run(const T*, const T*, T*) [with T = double]’ at /usr/include/eigen3/Eigen/src/Core/util/Memory.h:542:11, inlined from ‘void Eigen::internal::smart_copy(const T*, const T*, T*) [with T = double]’ at /usr/include/eigen3/Eigen/src/Core/util/Memory.h:532:66, inlined from ‘constexpr Eigen::internal::DenseStorage_impl::DenseStorage_impl(const Eigen::internal::DenseStorage_impl&) [with T = double; int Cols = 1; int Options = 0]’ at /usr/include/eigen3/Eigen/src/Core/DenseStorage.h:352:15, inlined from ‘constexpr Eigen::DenseStorage::DenseStorage(const Eigen::DenseStorage&) [with T = double; int Size = -1; int Rows = -1; int Cols = 1; int Options = 0; bool Trivial = true]’ at /usr/include/eigen3/Eigen/src/Core/DenseStorage.h:541:51, inlined from ‘constexpr Eigen::PlainObjectBase::PlainObjectBase(const Eigen::PlainObjectBase&) [with Derived = Eigen::Matrix]’ at /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:459:51, inlined from ‘constexpr Eigen::Matrix::Matrix(const Eigen::Matrix&) [with Scalar_ = double; int Rows_ = -1; int Cols_ = 1; int Options_ = 0; int MaxRows_ = -1; int MaxCols_ = 1]’ at /usr/include/eigen3/Eigen/src/Core/Matrix.h:388:51, inlined from ‘constexpr DWI2ADC::DWI2ADC(const DWI2ADC&)’ at cmd/dwi2adc.cpp:50:7, inlined from ‘MR::{anonymous}::ThreadedLoopRunInner::ThreadedLoopRunInner(const MR::vector&, const MR::vector&, const Functor&, ImageType& ...) [with int N = 2; Functor = DWI2ADC; ImageType = {MR::Image, MR::Image}]’ at ./core/algo/threaded_loop.h:276:11, inlined from ‘void MR::{anonymous}::ThreadedLoopRunOuter::run(Functor&&, ImageType&& ...) [with Functor = DWI2ADC; ImageType = {MR::Image&, MR::Image&}; OuterLoopType = MR::LoopAlongDynamicAxesProgress]’ at ./core/algo/threaded_loop.h:376:19, inlined from ‘void run()’ at cmd/dwi2adc.cpp:110:10: /usr/include/aarch64-linux-gnu/bits/string_fortified.h:29:33: warning: ‘((__int128 unsigned*)original)[1]’ may be used uninitialized [-Wmaybe-uninitialized] 29 | return __builtin___memcpy_chk (__dest, __src, __len, | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ 30 | __glibc_objsize0 (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ (411/548) [LB] bin/dwi2adc g++ tmp/src/exec_version.o tmp/cmd/dwi2adc.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dwi2adc (412/548) [CC] tmp/src/dwi/fmls.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/fmls.cpp -o tmp/src/dwi/fmls.o (413/548) [CC] tmp/cmd/label2mesh.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/label2mesh.cpp -o tmp/cmd/label2mesh.o (414/548) [LB] bin/tcksample g++ tmp/src/dwi/tractography/rng.o tmp/src/dwi/directions/set.o tmp/src/dwi/tractography/seeding/list.o tmp/src/exec_version.o tmp/src/dwi/tractography/mapping/voxel.o tmp/src/dwi/tractography/resampling/endpoints.o tmp/src/dwi/tractography/resampling/upsampler.o tmp/cmd/tcksample.o tmp/src/dwi/tractography/mapping/mapper_plugins.o tmp/src/dwi/tractography/resampling/resampling.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/resampling/fixed_step_size.o tmp/src/dwi/tractography/mapping/twi_stats.o tmp/src/dwi/directions/predefined.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/mapping/mapper.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/mapping/mapping.o tmp/src/dwi/tractography/resampling/downsampler.o tmp/src/dwi/tractography/resampling/fixed_num_points.o tmp/src/dwi/tractography/resampling/arc.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tcksample (415/548) [CC] tmp/cmd/mraverageheader.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mraverageheader.cpp -o tmp/cmd/mraverageheader.o (416/548) [LB] bin/connectome2tck g++ tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/seeding/list.o tmp/src/exec_version.o tmp/src/dwi/tractography/weights.o tmp/src/connectome/connectome.o tmp/cmd/connectome2tck.o tmp/src/dwi/tractography/connectome/exemplar.o tmp/src/dwi/tractography/connectome/connectome.o tmp/src/dwi/tractography/connectome/extract.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/connectome/tck2nodes.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/file_base.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/connectome2tck (417/548) [CC] tmp/src/dwi/tractography/mapping/gaussian/mapper.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/mapping/gaussian/mapper.cpp -o tmp/src/dwi/tractography/mapping/gaussian/mapper.o (418/548) [CC] tmp/cmd/tckmap.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tckmap.cpp -o tmp/cmd/tckmap.o (419/548) [LB] bin/mrmetric g++ tmp/src/exec_version.o tmp/src/registration/multi_contrast.o tmp/src/registration/transform/rigid.o tmp/src/registration/transform/convergence_check.o tmp/cmd/mrmetric.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrmetric (420/548) [CC] tmp/cmd/tckinfo.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tckinfo.cpp -o tmp/cmd/tckinfo.o (421/548) [CC] tmp/cmd/labelconvert.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/labelconvert.cpp -o tmp/cmd/labelconvert.o (422/548) [LB] bin/label2mesh g++ tmp/src/exec_version.o tmp/src/surface/polygon.o tmp/src/connectome/connectome.o tmp/src/surface/scalar.o tmp/src/connectome/lut.o tmp/src/surface/mesh.o tmp/src/surface/mesh_multi.o tmp/cmd/label2mesh.o tmp/src/surface/freesurfer.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/label2mesh (423/548) [CC] tmp/cmd/peaks2fixel.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/peaks2fixel.cpp -o tmp/cmd/peaks2fixel.o (424/548) [LB] bin/tckinfo g++ tmp/src/exec_version.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/seeding/list.o tmp/cmd/tckinfo.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/file_base.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tckinfo (425/548) [CC] tmp/cmd/amp2response.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/amp2response.cpp -o tmp/cmd/amp2response.o (426/548) [LB] bin/labelconvert g++ tmp/src/exec_version.o tmp/cmd/labelconvert.o tmp/src/connectome/connectome.o tmp/src/connectome/lut.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/labelconvert (427/548) [CC] tmp/cmd/warpconvert.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/warpconvert.cpp -o tmp/cmd/warpconvert.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/fmls.cpp -o tmp/src/dwi/fmls.o: In file included from src/dwi/fmls.h:23, from src/dwi/fmls.cpp:17: ./core/math/SH.h: In function ‘void MR::Math::SH::derivatives(const VectorType&, int, typename VectorType::Scalar, typename VectorType::Scalar, typename VectorType::Scalar&, typename VectorType::Scalar&, typename VectorType::Scalar&, typename VectorType::Scalar&, typename VectorType::Scalar&, typename VectorType::Scalar&, PrecomputedAL*) [with VectorType = MR::DWI::FMLS::SH_coefs]’: ./core/math/SH.h:604:33: warning: ‘*AL.1506[0]’ may be used uninitialized [-Wmaybe-uninitialized] 604 | amplitude = sh[0] * AL[0]; | ~~^ (428/548) [LB] bin/fod2fixel g++ tmp/src/exec_version.o tmp/cmd/fod2fixel.o tmp/src/dwi/directions/predefined.o tmp/src/dwi/directions/set.o tmp/src/dwi/directions/mask.o tmp/src/dwi/fmls.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/fod2fixel (429/548) [CC] tmp/cmd/5tt2gmwmi.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/5tt2gmwmi.cpp -o tmp/cmd/5tt2gmwmi.o (430/548) [LB] bin/peaks2fixel g++ tmp/src/exec_version.o tmp/cmd/peaks2fixel.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/peaks2fixel (431/548) [CC] tmp/cmd/tcksift.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tcksift.cpp -o tmp/cmd/tcksift.o (432/548) [LB] bin/mraverageheader g++ tmp/src/exec_version.o tmp/src/registration/transform/initialiser.o tmp/src/registration/multi_contrast.o tmp/src/registration/transform/rigid.o tmp/cmd/mraverageheader.o tmp/src/registration/transform/convergence_check.o tmp/src/registration/transform/initialiser_helpers.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mraverageheader (433/548) [CC] tmp/src/dwi/tractography/SIFT/sift.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/SIFT/sift.cpp -o tmp/src/dwi/tractography/SIFT/sift.o (434/548) [LB] bin/5tt2gmwmi g++ tmp/src/exec_version.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/seeding/list.o tmp/cmd/5tt2gmwmi.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/ACT/act.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/5tt2gmwmi (435/548) [CC] tmp/src/dwi/tractography/mapping/fixel_td_map.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/mapping/fixel_td_map.cpp -o tmp/src/dwi/tractography/mapping/fixel_td_map.o (436/548) [CC] tmp/src/dwi/tractography/SIFT/proc_mask.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/SIFT/proc_mask.cpp -o tmp/src/dwi/tractography/SIFT/proc_mask.o (437/548) [CC] tmp/src/dwi/tractography/SIFT/track_index_range.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/SIFT/track_index_range.cpp -o tmp/src/dwi/tractography/SIFT/track_index_range.o (438/548) [CC] tmp/src/dwi/tractography/SIFT/track_contribution.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/SIFT/track_contribution.cpp -o tmp/src/dwi/tractography/SIFT/track_contribution.o (439/548) [CC] tmp/src/dwi/tractography/SIFT/sifter.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/SIFT/sifter.cpp -o tmp/src/dwi/tractography/SIFT/sifter.o (440/548) [LB] bin/warpconvert g++ tmp/src/exec_version.o tmp/cmd/warpconvert.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/warpconvert (441/548) [CC] tmp/src/dwi/tractography/SIFT/gradient_sort.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/SIFT/gradient_sort.cpp -o tmp/src/dwi/tractography/SIFT/gradient_sort.o (442/548) [CC] tmp/cmd/fixel2peaks.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/fixel2peaks.cpp -o tmp/cmd/fixel2peaks.o (443/548) [LB] bin/amp2response g++ tmp/src/exec_version.o tmp/cmd/amp2response.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/amp2response (444/548) [CC] tmp/cmd/mrfilter.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrfilter.cpp -o tmp/cmd/mrfilter.o (445/548) [CC] tmp/cmd/dirstat.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/dirstat.cpp -o tmp/cmd/dirstat.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/transformcalc.cpp -o tmp/cmd/transformcalc.o: cmd/transformcalc.cpp: In function ‘void run()’: cmd/transformcalc.cpp:281:51: warning: ‘Eigen::Matrix::Scalar, 3, 1> Eigen::MatrixBase::eulerAngles(Eigen::Index, Eigen::Index, Eigen::Index) const [with Derived = Eigen::Matrix; typename Eigen::internal::traits::Scalar = double; Eigen::Index = long int]’ is deprecated: Use .canonicalEulerAngles() instead. [-Wdeprecated-declarations] 281 | Eigen::Vector3d euler_angles = R.eulerAngles(0, 1, 2); | ~~~~~~~~~~~~~^~~~~~~~~ In file included from /usr/include/eigen3/Eigen/Geometry:37, from cmd/transformcalc.cpp:17: /usr/include/eigen3/Eigen/src/Geometry/EulerAngles.h:136:77: note: declared here 136 | EIGEN_DEVICE_FUNC inline Matrix::Scalar, 3, 1> MatrixBase::eulerAngles( | ^~~~~~~~~~~~~~~~~~~ (446/548) [LB] bin/transformcalc g++ tmp/src/exec_version.o tmp/cmd/transformcalc.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/transformcalc (447/548) [CC] tmp/cmd/mrthreshold.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrthreshold.cpp -o tmp/cmd/mrthreshold.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tcksift.cpp -o tmp/cmd/tcksift.o: In file included from src/dwi/tractography/SIFT/sifter.h:27, from cmd/tcksift.cpp:27: src/dwi/tractography/mapping/fixel_td_map.h: In instantiation of ‘class MR::DWI::Tractography::Mapping::Fixel_TD_map’: src/dwi/tractography/SIFT/model_base.h:124:15: required from ‘class MR::DWI::Tractography::SIFT::ModelBase’ 124 | class ModelBase : public Mapping::Fixel_TD_map | ^~~~~~~~~ src/dwi/tractography/SIFT/model.h:58:13: required from ‘class MR::DWI::Tractography::SIFT::Model’ 58 | class Model : public ModelBase | ^~~~~ src/dwi/tractography/SIFT/sifter.h:48:29: required from here 48 | class SIFTer : public Model | ^~~~~~~~~~~~ src/dwi/fixel_map.h:187:10: warning: ‘bool MR::DWI::Fixel_map::operator()(const MR::DWI::FMLS::FOD_lobes&) [with Fixel = MR::DWI::Tractography::SIFT::Fixel]’ was hidden [-Woverloaded-virtual=] 187 | bool Fixel_map::operator() (const FMLS::FOD_lobes& in) | ^~~~~~~~~~~~~~~~ In file included from src/dwi/tractography/SIFT/model_base.h:30, from src/dwi/tractography/SIFT/fixel.h:23, from src/dwi/tractography/SIFT/sifter.h:29: src/dwi/tractography/mapping/fixel_td_map.h:70:14: note: by ‘bool MR::DWI::Tractography::Mapping::Fixel_TD_map::operator()(const MR::DWI::Tractography::Mapping::SetDixel&) [with Fixel = MR::DWI::Tractography::SIFT::Fixel]’ 70 | bool Fixel_TD_map::operator() (const SetDixel& in) | ^~~~~~~~~~~~~~~~~~~ (448/548) [CC] tmp/cmd/mrgrid.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrgrid.cpp -o tmp/cmd/mrgrid.o (449/548) [LB] bin/fixel2peaks g++ tmp/src/exec_version.o tmp/cmd/fixel2peaks.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/fixel2peaks (450/548) [CC] tmp/cmd/fixel2tsf.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/fixel2tsf.cpp -o tmp/cmd/fixel2tsf.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/SIFT/sifter.cpp -o tmp/src/dwi/tractography/SIFT/sifter.o: In file included from src/dwi/tractography/SIFT/sifter.h:27, from src/dwi/tractography/SIFT/sifter.cpp:17: src/dwi/tractography/mapping/fixel_td_map.h: In instantiation of ‘class MR::DWI::Tractography::Mapping::Fixel_TD_map’: src/dwi/tractography/SIFT/model_base.h:124:15: required from ‘class MR::DWI::Tractography::SIFT::ModelBase’ 124 | class ModelBase : public Mapping::Fixel_TD_map | ^~~~~~~~~ src/dwi/tractography/SIFT/model.h:58:13: required from ‘class MR::DWI::Tractography::SIFT::Model’ 58 | class Model : public ModelBase | ^~~~~ src/dwi/tractography/SIFT/sifter.h:48:29: required from here 48 | class SIFTer : public Model | ^~~~~~~~~~~~ src/dwi/fixel_map.h:187:10: warning: ‘bool MR::DWI::Fixel_map::operator()(const MR::DWI::FMLS::FOD_lobes&) [with Fixel = MR::DWI::Tractography::SIFT::Fixel]’ was hidden [-Woverloaded-virtual=] 187 | bool Fixel_map::operator() (const FMLS::FOD_lobes& in) | ^~~~~~~~~~~~~~~~ In file included from src/dwi/tractography/SIFT/model_base.h:30, from src/dwi/tractography/SIFT/fixel.h:23, from src/dwi/tractography/SIFT/sifter.h:29: src/dwi/tractography/mapping/fixel_td_map.h:70:14: note: by ‘bool MR::DWI::Tractography::Mapping::Fixel_TD_map::operator()(const MR::DWI::Tractography::Mapping::SetDixel&) [with Fixel = MR::DWI::Tractography::SIFT::Fixel]’ 70 | bool Fixel_TD_map::operator() (const SetDixel& in) | ^~~~~~~~~~~~~~~~~~~ src/dwi/tractography/SIFT/sifter.cpp: In member function ‘void MR::DWI::Tractography::SIFT::SIFTer::perform_filtering()’: src/dwi/tractography/SIFT/sifter.cpp:73:29: warning: ‘void std::random_shuffle(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator > >]’ is deprecated: use 'std::shuffle' instead [-Wdeprecated-declarations] 73 | std::random_shuffle (noncontributing_indices.begin(), noncontributing_indices.end()); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/16/algorithm:63, from ./core/mrtrix.h:27, from ./core/cmdline_option.h:28, from ./core/app.h:29, from ./core/header.h:23, from ./core/image.h:25, from src/dwi/tractography/SIFT/sifter.h:22: /usr/include/c++/16/bits/stl_algo.h:4511:5: note: declared here 4511 | random_shuffle(_RandomAccessIterator __first, _RandomAccessIterator __last) | ^~~~~~~~~~~~~~ (451/548) [LB] bin/tcksift g++ tmp/src/dwi/tractography/rng.o tmp/cmd/tcksift.o tmp/src/dwi/directions/set.o tmp/src/dwi/tractography/seeding/list.o tmp/src/exec_version.o tmp/src/dwi/tractography/mapping/voxel.o tmp/src/dwi/directions/mask.o tmp/src/dwi/tractography/SIFT/sift.o tmp/src/dwi/tractography/resampling/endpoints.o tmp/src/dwi/tractography/mapping/fixel_td_map.o tmp/src/dwi/tractography/resampling/upsampler.o tmp/src/dwi/tractography/SIFT/proc_mask.o tmp/src/dwi/tractography/mapping/mapper_plugins.o tmp/src/dwi/tractography/SIFT/track_index_range.o tmp/src/dwi/tractography/resampling/resampling.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/resampling/fixed_step_size.o tmp/src/dwi/tractography/mapping/twi_stats.o tmp/src/dwi/tractography/ACT/act.o tmp/src/dwi/directions/predefined.o tmp/src/dwi/tractography/SIFT/track_contribution.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/SIFT/sifter.o tmp/src/dwi/tractography/SIFT/gradient_sort.o tmp/src/dwi/tractography/mapping/mapper.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/fmls.o tmp/src/dwi/tractography/mapping/mapping.o tmp/src/dwi/tractography/resampling/downsampler.o tmp/src/dwi/tractography/resampling/fixed_num_points.o tmp/src/dwi/tractography/resampling/arc.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tcksift (452/548) [CC] tmp/cmd/tensor2metric.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tensor2metric.cpp -o tmp/cmd/tensor2metric.o (453/548) [LB] bin/dirstat g++ tmp/src/exec_version.o tmp/src/dwi/directions/file.o tmp/cmd/dirstat.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dirstat (454/548) [CC] tmp/cmd/tsfvalidate.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tsfvalidate.cpp -o tmp/cmd/tsfvalidate.o (455/548) [LB] bin/tsfvalidate g++ tmp/src/exec_version.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/seeding/list.o tmp/cmd/tsfvalidate.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/file_base.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tsfvalidate (456/548) [CC] tmp/cmd/dwiextract.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/dwiextract.cpp -o tmp/cmd/dwiextract.o (457/548) [LB] bin/mrthreshold g++ tmp/cmd/mrthreshold.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrthreshold (458/548) [CC] tmp/src/surface/algo/mesh2image.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/surface/algo/mesh2image.cpp -o tmp/src/surface/algo/mesh2image.o (459/548) [LB] bin/tckmap g++ tmp/src/dwi/tractography/rng.o tmp/src/dwi/directions/set.o tmp/src/dwi/tractography/seeding/list.o tmp/src/exec_version.o tmp/src/dwi/tractography/mapping/voxel.o tmp/src/dwi/tractography/mapping/gaussian/mapper.o tmp/src/dwi/tractography/resampling/endpoints.o tmp/src/dwi/tractography/resampling/downsampler.o tmp/src/dwi/tractography/resampling/upsampler.o tmp/src/dwi/tractography/mapping/writer.o tmp/src/dwi/tractography/mapping/mapper_plugins.o tmp/src/dwi/tractography/resampling/resampling.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/resampling/fixed_step_size.o tmp/src/dwi/tractography/mapping/twi_stats.o tmp/src/dwi/directions/predefined.o tmp/src/dwi/tractography/file_base.o tmp/cmd/tckmap.o tmp/src/dwi/tractography/mapping/mapper.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/mapping/mapping.o tmp/src/dwi/tractography/weights.o tmp/src/dwi/tractography/resampling/fixed_num_points.o tmp/src/dwi/tractography/resampling/arc.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tckmap (460/548) [CC] tmp/src/surface/filter/base.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/surface/filter/base.cpp -o tmp/src/surface/filter/base.o (461/548) [LB] bin/tensor2metric g++ tmp/src/exec_version.o tmp/cmd/tensor2metric.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tensor2metric (462/548) [CC] tmp/cmd/mesh2voxel.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mesh2voxel.cpp -o tmp/cmd/mesh2voxel.o (463/548) [LB] bin/fixel2tsf g++ tmp/src/dwi/tractography/rng.o tmp/src/dwi/directions/set.o tmp/src/dwi/tractography/seeding/list.o tmp/src/exec_version.o tmp/src/dwi/tractography/mapping/voxel.o tmp/src/dwi/tractography/resampling/endpoints.o tmp/src/dwi/tractography/resampling/upsampler.o tmp/src/dwi/tractography/mapping/mapper_plugins.o tmp/src/dwi/tractography/resampling/resampling.o tmp/src/dwi/tractography/properties.o tmp/cmd/fixel2tsf.o tmp/src/dwi/tractography/resampling/fixed_step_size.o tmp/src/dwi/tractography/mapping/twi_stats.o tmp/src/dwi/directions/predefined.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/mapping/mapper.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/mapping/mapping.o tmp/src/dwi/tractography/resampling/downsampler.o tmp/src/dwi/tractography/resampling/fixed_num_points.o tmp/src/dwi/tractography/resampling/arc.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/fixel2tsf (464/548) [CC] tmp/src/surface/filter/vertex_transform.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/surface/filter/vertex_transform.cpp -o tmp/src/surface/filter/vertex_transform.o (465/548) [LB] bin/mrgrid g++ tmp/src/exec_version.o tmp/cmd/mrgrid.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrgrid (466/548) [CC] tmp/cmd/labelstats.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/labelstats.cpp -o tmp/cmd/labelstats.o (467/548) [CC] tmp/cmd/tsfthreshold.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tsfthreshold.cpp -o tmp/cmd/tsfthreshold.o (468/548) [CC] tmp/cmd/fixel2sh.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/fixel2sh.cpp -o tmp/cmd/fixel2sh.o (469/548) [CC] tmp/cmd/warpinvert.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/warpinvert.cpp -o tmp/cmd/warpinvert.o (470/548) [LB] bin/mrfilter g++ tmp/src/exec_version.o tmp/cmd/mrfilter.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrfilter (471/548) [CC] tmp/src/dwi/tractography/SIFT2/fixel_updater.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/SIFT2/fixel_updater.cpp -o tmp/src/dwi/tractography/SIFT2/fixel_updater.o (472/548) [LB] bin/dwiextract g++ tmp/cmd/dwiextract.o tmp/src/exec_version.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dwiextract (473/548) [CC] tmp/cmd/tcksift2.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tcksift2.cpp -o tmp/cmd/tcksift2.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/SIFT2/fixel_updater.cpp -o tmp/src/dwi/tractography/SIFT2/fixel_updater.o: In file included from src/dwi/tractography/SIFT/model.h:25, from src/dwi/tractography/SIFT2/tckfactor.h:30, from src/dwi/tractography/SIFT2/fixel_updater.cpp:20: src/dwi/tractography/mapping/fixel_td_map.h: In instantiation of ‘class MR::DWI::Tractography::Mapping::Fixel_TD_map’: src/dwi/tractography/SIFT/model_base.h:124:15: required from ‘class MR::DWI::Tractography::SIFT::ModelBase’ 124 | class ModelBase : public Mapping::Fixel_TD_map | ^~~~~~~~~ src/dwi/tractography/SIFT/model.h:58:13: required from ‘class MR::DWI::Tractography::SIFT::Model’ 58 | class Model : public ModelBase | ^~~~~ src/dwi/tractography/SIFT2/tckfactor.h:59:38: required from here 59 | class TckFactor : public SIFT::Model | ^~~~~~~~~~~~ src/dwi/fixel_map.h:187:10: warning: ‘bool MR::DWI::Fixel_map::operator()(const MR::DWI::FMLS::FOD_lobes&) [with Fixel = MR::DWI::Tractography::SIFT2::Fixel]’ was hidden [-Woverloaded-virtual=] 187 | bool Fixel_map::operator() (const FMLS::FOD_lobes& in) | ^~~~~~~~~~~~~~~~ In file included from src/dwi/tractography/SIFT/model_base.h:30, from src/dwi/tractography/SIFT/model.h:38: src/dwi/tractography/mapping/fixel_td_map.h:70:14: note: by ‘bool MR::DWI::Tractography::Mapping::Fixel_TD_map::operator()(const MR::DWI::Tractography::Mapping::SetDixel&) [with Fixel = MR::DWI::Tractography::SIFT2::Fixel]’ 70 | bool Fixel_TD_map::operator() (const SetDixel& in) | ^~~~~~~~~~~~~~~~~~~ (474/548) [CC] tmp/src/dwi/tractography/SIFT2/tckfactor.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/SIFT2/tckfactor.cpp -o tmp/src/dwi/tractography/SIFT2/tckfactor.o (475/548) [LB] bin/tsfthreshold g++ tmp/src/exec_version.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/seeding/list.o tmp/cmd/tsfthreshold.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/file_base.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tsfthreshold (476/548) [CC] tmp/src/dwi/tractography/SIFT2/reg_calculator.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/SIFT2/reg_calculator.cpp -o tmp/src/dwi/tractography/SIFT2/reg_calculator.o (477/548) [LB] bin/labelstats g++ tmp/src/exec_version.o tmp/cmd/labelstats.o tmp/src/connectome/connectome.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/labelstats (478/548) [LB] bin/mesh2voxel g++ tmp/src/exec_version.o tmp/src/surface/algo/mesh2image.o tmp/src/surface/filter/base.o tmp/src/connectome/connectome.o tmp/src/connectome/lut.o tmp/cmd/mesh2voxel.o tmp/src/surface/scalar.o tmp/src/surface/mesh_multi.o tmp/src/surface/filter/vertex_transform.o tmp/src/surface/mesh.o tmp/src/surface/polygon.o tmp/src/surface/freesurfer.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mesh2voxel (479/548) [CC] tmp/src/dwi/tractography/SIFT2/coeff_optimiser.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/SIFT2/coeff_optimiser.cpp -o tmp/src/dwi/tractography/SIFT2/coeff_optimiser.o (480/548) [CC] tmp/src/dwi/tractography/SIFT2/streamline_stats.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/SIFT2/streamline_stats.cpp -o tmp/src/dwi/tractography/SIFT2/streamline_stats.o (481/548) [CC] tmp/src/dwi/tractography/SIFT2/line_search.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/SIFT2/line_search.cpp -o tmp/src/dwi/tractography/SIFT2/line_search.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/SIFT2/reg_calculator.cpp -o tmp/src/dwi/tractography/SIFT2/reg_calculator.o: In file included from src/dwi/tractography/SIFT/model.h:25, from src/dwi/tractography/SIFT2/tckfactor.h:30, from src/dwi/tractography/SIFT2/reg_calculator.cpp:20: src/dwi/tractography/mapping/fixel_td_map.h: In instantiation of ‘class MR::DWI::Tractography::Mapping::Fixel_TD_map’: src/dwi/tractography/SIFT/model_base.h:124:15: required from ‘class MR::DWI::Tractography::SIFT::ModelBase’ 124 | class ModelBase : public Mapping::Fixel_TD_map | ^~~~~~~~~ src/dwi/tractography/SIFT/model.h:58:13: required from ‘class MR::DWI::Tractography::SIFT::Model’ 58 | class Model : public ModelBase | ^~~~~ src/dwi/tractography/SIFT2/tckfactor.h:59:38: required from here 59 | class TckFactor : public SIFT::Model | ^~~~~~~~~~~~ src/dwi/fixel_map.h:187:10: warning: ‘bool MR::DWI::Fixel_map::operator()(const MR::DWI::FMLS::FOD_lobes&) [with Fixel = MR::DWI::Tractography::SIFT2::Fixel]’ was hidden [-Woverloaded-virtual=] 187 | bool Fixel_map::operator() (const FMLS::FOD_lobes& in) | ^~~~~~~~~~~~~~~~ In file included from src/dwi/tractography/SIFT/model_base.h:30, from src/dwi/tractography/SIFT/model.h:38: src/dwi/tractography/mapping/fixel_td_map.h:70:14: note: by ‘bool MR::DWI::Tractography::Mapping::Fixel_TD_map::operator()(const MR::DWI::Tractography::Mapping::SetDixel&) [with Fixel = MR::DWI::Tractography::SIFT2::Fixel]’ 70 | bool Fixel_TD_map::operator() (const SetDixel& in) | ^~~~~~~~~~~~~~~~~~~ (482/548) [CC] tmp/cmd/tsfinfo.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tsfinfo.cpp -o tmp/cmd/tsfinfo.o (483/548) [LB] bin/warpinvert g++ tmp/src/exec_version.o tmp/cmd/warpinvert.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/warpinvert (484/548) [CC] tmp/cmd/dwi2mask.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/dwi2mask.cpp -o tmp/cmd/dwi2mask.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/SIFT2/coeff_optimiser.cpp -o tmp/src/dwi/tractography/SIFT2/coeff_optimiser.o: In file included from src/dwi/tractography/SIFT/model.h:25, from src/dwi/tractography/SIFT2/tckfactor.h:30, from src/dwi/tractography/SIFT2/coeff_optimiser.cpp:21: src/dwi/tractography/mapping/fixel_td_map.h: In instantiation of ‘class MR::DWI::Tractography::Mapping::Fixel_TD_map’: src/dwi/tractography/SIFT/model_base.h:124:15: required from ‘class MR::DWI::Tractography::SIFT::ModelBase’ 124 | class ModelBase : public Mapping::Fixel_TD_map | ^~~~~~~~~ src/dwi/tractography/SIFT/model.h:58:13: required from ‘class MR::DWI::Tractography::SIFT::Model’ 58 | class Model : public ModelBase | ^~~~~ src/dwi/tractography/SIFT2/tckfactor.h:59:38: required from here 59 | class TckFactor : public SIFT::Model | ^~~~~~~~~~~~ src/dwi/fixel_map.h:187:10: warning: ‘bool MR::DWI::Fixel_map::operator()(const MR::DWI::FMLS::FOD_lobes&) [with Fixel = MR::DWI::Tractography::SIFT2::Fixel]’ was hidden [-Woverloaded-virtual=] 187 | bool Fixel_map::operator() (const FMLS::FOD_lobes& in) | ^~~~~~~~~~~~~~~~ In file included from src/dwi/tractography/SIFT/model_base.h:30, from src/dwi/tractography/SIFT/model.h:38: src/dwi/tractography/mapping/fixel_td_map.h:70:14: note: by ‘bool MR::DWI::Tractography::Mapping::Fixel_TD_map::operator()(const MR::DWI::Tractography::Mapping::SetDixel&) [with Fixel = MR::DWI::Tractography::SIFT2::Fixel]’ 70 | bool Fixel_TD_map::operator() (const SetDixel& in) | ^~~~~~~~~~~~~~~~~~~ (485/548) [CC] tmp/cmd/fixelcorrespondence.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/fixelcorrespondence.cpp -o tmp/cmd/fixelcorrespondence.o (486/548) [LB] bin/fixel2sh g++ tmp/src/exec_version.o tmp/cmd/fixel2sh.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/fixel2sh g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/SIFT2/line_search.cpp -o tmp/src/dwi/tractography/SIFT2/line_search.o: In file included from src/dwi/tractography/SIFT/model.h:25, from src/dwi/tractography/SIFT2/tckfactor.h:30, from src/dwi/tractography/SIFT2/line_search.cpp:19: src/dwi/tractography/mapping/fixel_td_map.h: In instantiation of ‘class MR::DWI::Tractography::Mapping::Fixel_TD_map’: src/dwi/tractography/SIFT/model_base.h:124:15: required from ‘class MR::DWI::Tractography::SIFT::ModelBase’ 124 | class ModelBase : public Mapping::Fixel_TD_map | ^~~~~~~~~ src/dwi/tractography/SIFT/model.h:58:13: required from ‘class MR::DWI::Tractography::SIFT::Model’ 58 | class Model : public ModelBase | ^~~~~ src/dwi/tractography/SIFT2/tckfactor.h:59:38: required from here 59 | class TckFactor : public SIFT::Model | ^~~~~~~~~~~~ src/dwi/fixel_map.h:187:10: warning: ‘bool MR::DWI::Fixel_map::operator()(const MR::DWI::FMLS::FOD_lobes&) [with Fixel = MR::DWI::Tractography::SIFT2::Fixel]’ was hidden [-Woverloaded-virtual=] 187 | bool Fixel_map::operator() (const FMLS::FOD_lobes& in) | ^~~~~~~~~~~~~~~~ In file included from src/dwi/tractography/SIFT/model_base.h:30, from src/dwi/tractography/SIFT/model.h:38: src/dwi/tractography/mapping/fixel_td_map.h:70:14: note: by ‘bool MR::DWI::Tractography::Mapping::Fixel_TD_map::operator()(const MR::DWI::Tractography::Mapping::SetDixel&) [with Fixel = MR::DWI::Tractography::SIFT2::Fixel]’ 70 | bool Fixel_TD_map::operator() (const SetDixel& in) | ^~~~~~~~~~~~~~~~~~~ (487/548) [CC] tmp/cmd/tsfmult.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tsfmult.cpp -o tmp/cmd/tsfmult.o (488/548) [CC] tmp/cmd/mrmath.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/mrmath.cpp -o tmp/cmd/mrmath.o (489/548) [LB] bin/tsfinfo g++ tmp/src/exec_version.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/file_base.o tmp/cmd/tsfinfo.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tsfinfo (490/548) [CC] tmp/cmd/shview.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ cmd/shview.cpp -o tmp/cmd/shview.o (491/548) [LB] bin/tsfmult g++ tmp/src/exec_version.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/file_base.o tmp/cmd/tsfmult.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tsfmult /build/reproducible-path/mrtrix3-3.0.8/./build:755: DeprecationWarning: codecs.open() is deprecated. Use open() instead. with codecs.open (self.cmd[1], mode='w', encoding='utf-8') as fd: (492/548) [RCC] tmp/src/gui/shview/icons.cpp rcc icons/shview.qrc -o tmp/src/gui/shview/icons.cpp (493/548) [CC] tmp/src/gui/shview/icons.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/shview/icons.cpp -o tmp/src/gui/shview/icons.o (494/548) [CC] tmp/src/gui/shview/render_window.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/shview/render_window.cpp -o tmp/src/gui/shview/render_window.o (495/548) [MOC] tmp/src/gui/shview/render_window_moc.cpp moc src/gui/shview/render_window.h -o tmp/src/gui/shview/render_window_moc.cpp (496/548) [CC] tmp/src/gui/shview/render_window_moc.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ tmp/src/gui/shview/render_window_moc.cpp -o tmp/src/gui/shview/render_window_moc.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tcksift2.cpp -o tmp/cmd/tcksift2.o: In file included from src/dwi/tractography/mapping/fixel_td_map.h:21, from cmd/tcksift2.cpp:26: src/dwi/tractography/mapping/fixel_td_map.h: In instantiation of ‘class MR::DWI::Tractography::Mapping::Fixel_TD_map’: src/dwi/tractography/SIFT/model_base.h:124:15: required from ‘class MR::DWI::Tractography::SIFT::ModelBase’ 124 | class ModelBase : public Mapping::Fixel_TD_map | ^~~~~~~~~ src/dwi/tractography/SIFT/model.h:58:13: required from ‘class MR::DWI::Tractography::SIFT::Model’ 58 | class Model : public ModelBase | ^~~~~ src/dwi/tractography/SIFT2/tckfactor.h:59:38: required from here 59 | class TckFactor : public SIFT::Model | ^~~~~~~~~~~~ src/dwi/fixel_map.h:187:10: warning: ‘bool MR::DWI::Fixel_map::operator()(const MR::DWI::FMLS::FOD_lobes&) [with Fixel = MR::DWI::Tractography::SIFT2::Fixel]’ was hidden [-Woverloaded-virtual=] 187 | bool Fixel_map::operator() (const FMLS::FOD_lobes& in) | ^~~~~~~~~~~~~~~~ src/dwi/tractography/mapping/fixel_td_map.h:70:14: note: by ‘bool MR::DWI::Tractography::Mapping::Fixel_TD_map::operator()(const MR::DWI::Tractography::Mapping::SetDixel&) [with Fixel = MR::DWI::Tractography::SIFT2::Fixel]’ 70 | bool Fixel_TD_map::operator() (const SetDixel& in) | ^~~~~~~~~~~~~~~~~~~ (497/548) [CC] tmp/src/gui/shview/file_open.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/aarch64-linux-gnu/qt5 -isystem /usr/include/aarch64-linux-gnu/qt5/QtOpenGL -isystem /usr/include/aarch64-linux-gnu/qt5/QtSvg -isystem /usr/include/aarch64-linux-gnu/qt5/QtWidgets -isystem /usr/include/aarch64-linux-gnu/qt5/QtGui -isystem /usr/include/aarch64-linux-gnu/qt5/QtNetwork -isystem /usr/include/aarch64-linux-gnu/qt5/QtCore -isystem /usr/lib/aarch64-linux-gnu/qt5/mkspecs/linux-g++ src/gui/shview/file_open.cpp -o tmp/src/gui/shview/file_open.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/SIFT2/tckfactor.cpp -o tmp/src/dwi/tractography/SIFT2/tckfactor.o: In file included from src/dwi/tractography/SIFT/model.h:25, from src/dwi/tractography/SIFT2/tckfactor.h:30, from src/dwi/tractography/SIFT2/tckfactor.cpp:31: src/dwi/tractography/mapping/fixel_td_map.h: In instantiation of ‘class MR::DWI::Tractography::Mapping::Fixel_TD_map’: src/dwi/tractography/SIFT/model_base.h:124:15: required from ‘class MR::DWI::Tractography::SIFT::ModelBase’ 124 | class ModelBase : public Mapping::Fixel_TD_map | ^~~~~~~~~ src/dwi/tractography/SIFT/model.h:58:13: required from ‘class MR::DWI::Tractography::SIFT::Model’ 58 | class Model : public ModelBase | ^~~~~ src/dwi/tractography/SIFT2/tckfactor.h:59:38: required from here 59 | class TckFactor : public SIFT::Model | ^~~~~~~~~~~~ src/dwi/fixel_map.h:187:10: warning: ‘bool MR::DWI::Fixel_map::operator()(const MR::DWI::FMLS::FOD_lobes&) [with Fixel = MR::DWI::Tractography::SIFT2::Fixel]’ was hidden [-Woverloaded-virtual=] 187 | bool Fixel_map::operator() (const FMLS::FOD_lobes& in) | ^~~~~~~~~~~~~~~~ In file included from src/dwi/tractography/SIFT/model_base.h:30, from src/dwi/tractography/SIFT/model.h:38: src/dwi/tractography/mapping/fixel_td_map.h:70:14: note: by ‘bool MR::DWI::Tractography::Mapping::Fixel_TD_map::operator()(const MR::DWI::Tractography::Mapping::SetDixel&) [with Fixel = MR::DWI::Tractography::SIFT2::Fixel]’ 70 | bool Fixel_TD_map::operator() (const SetDixel& in) | ^~~~~~~~~~~~~~~~~~~ (498/548) [LB] bin/tcksift2 g++ tmp/src/dwi/tractography/SIFT2/fixel_updater.o tmp/src/dwi/tractography/mapping/voxel.o tmp/src/dwi/directions/mask.o tmp/src/dwi/tractography/SIFT/proc_mask.o tmp/src/dwi/tractography/mapping/mapper_plugins.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/ACT/act.o tmp/cmd/tcksift2.o tmp/src/dwi/directions/predefined.o tmp/src/dwi/tractography/SIFT/track_contribution.o tmp/src/dwi/tractography/SIFT2/tckfactor.o tmp/src/dwi/tractography/SIFT2/reg_calculator.o tmp/src/dwi/tractography/mapping/mapper.o tmp/src/dwi/tractography/mapping/mapping.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/directions/set.o tmp/src/dwi/tractography/seeding/list.o tmp/src/exec_version.o tmp/src/dwi/tractography/SIFT/sift.o tmp/src/dwi/tractography/SIFT2/coeff_optimiser.o tmp/src/dwi/tractography/resampling/endpoints.o tmp/src/dwi/tractography/mapping/fixel_td_map.o tmp/src/dwi/tractography/resampling/upsampler.o tmp/src/dwi/tractography/resampling/downsampler.o tmp/src/dwi/tractography/SIFT/track_index_range.o tmp/src/dwi/tractography/resampling/resampling.o tmp/src/dwi/tractography/resampling/fixed_step_size.o tmp/src/dwi/tractography/mapping/twi_stats.o tmp/src/dwi/tractography/SIFT2/streamline_stats.o tmp/src/dwi/tractography/SIFT2/line_search.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/fmls.o tmp/src/dwi/tractography/resampling/fixed_num_points.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/resampling/arc.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tcksift2 (499/548) [CC] tmp/cmd/meshconvert.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/meshconvert.cpp -o tmp/cmd/meshconvert.o (500/548) [CC] tmp/src/dwi/tractography/seeding/seeding.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/seeding/seeding.cpp -o tmp/src/dwi/tractography/seeding/seeding.o (501/548) [LB] bin/fixelcorrespondence g++ tmp/src/exec_version.o tmp/cmd/fixelcorrespondence.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/fixelcorrespondence (502/548) [CC] tmp/cmd/tckgen.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tckgen.cpp -o tmp/cmd/tckgen.o (503/548) [CC] tmp/src/dwi/tractography/tracking/tractography.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/tracking/tractography.cpp -o tmp/src/dwi/tractography/tracking/tractography.o (504/548) [LB] bin/shview g++ tmp/src/gui/lighting_dock_moc.o tmp/src/gui/dialog/file.o tmp/src/gui/opengl/gl_core_3_3.o tmp/src/gui/lighting_dock.o tmp/src/gui/opengl/lighting.o tmp/src/gui/shapes/halfsphere.o tmp/src/gui/opengl/gl.o tmp/src/gui/color_button.o tmp/src/gui/dwi/renderer.o tmp/src/dwi/directions/predefined.o tmp/cmd/shview.o tmp/src/gui/shview/icons.o tmp/src/gui/dialog/dicom.o tmp/src/gui/shview/render_window.o tmp/src/gui/shview/render_window_moc.o tmp/src/gui/crosshair.o tmp/src/gui/gui.o tmp/src/gui/dialog/dialog.o tmp/src/exec_version.o tmp/src/dwi/directions/set.o tmp/src/gui/dwi/render_frame.o tmp/src/gui/dwi/render_frame_moc.o tmp/src/gui/color_button_moc.o tmp/src/gui/opengl/lighting_moc.o tmp/src/gui/opengl/shader.o tmp/src/gui/opengl/font.o tmp/src/gui/dialog/list.o tmp/src/gui/projection.o tmp/src/gui/shview/file_open.o tmp/src/gui/dialog/progress.o tmp/src/gui/dialog/report_exception.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib /usr/lib/aarch64-linux-gnu/libQt5OpenGL.so /usr/lib/aarch64-linux-gnu/libQt5Svg.so /usr/lib/aarch64-linux-gnu/libQt5Widgets.so /usr/lib/aarch64-linux-gnu/libQt5Gui.so /usr/lib/aarch64-linux-gnu/libQt5Network.so /usr/lib/aarch64-linux-gnu/libQt5Core.so -lGL -lpthread -o bin/shview (505/548) [CC] tmp/src/dwi/tractography/tracking/write_kernel.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/tracking/write_kernel.cpp -o tmp/src/dwi/tractography/tracking/write_kernel.o (506/548) [LB] bin/meshconvert g++ tmp/src/exec_version.o tmp/src/surface/filter/base.o tmp/src/surface/scalar.o tmp/src/surface/filter/vertex_transform.o tmp/src/surface/mesh_multi.o tmp/src/surface/polygon.o tmp/src/connectome/connectome.o tmp/src/connectome/lut.o tmp/cmd/meshconvert.o tmp/src/surface/mesh.o tmp/src/surface/freesurfer.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/meshconvert (507/548) [CC] tmp/src/dwi/tractography/tracking/method.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/tracking/method.cpp -o tmp/src/dwi/tractography/tracking/method.o (508/548) [CC] tmp/src/dwi/tractography/algorithms/iFOD1.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/algorithms/iFOD1.cpp -o tmp/src/dwi/tractography/algorithms/iFOD1.o (509/548) [CC] tmp/src/dwi/tractography/tracking/shared.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/tracking/shared.cpp -o tmp/src/dwi/tractography/tracking/shared.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/seeding/seeding.cpp -o tmp/src/dwi/tractography/seeding/seeding.o: In file included from src/dwi/tractography/SIFT/model_base.h:21, from src/dwi/tractography/seeding/dynamic.h:32, from src/dwi/tractography/seeding/seeding.h:23, from src/dwi/tractography/seeding/seeding.cpp:18: src/dwi/tractography/mapping/fixel_td_map.h: In instantiation of ‘class MR::DWI::Tractography::Mapping::Fixel_TD_map’: src/dwi/tractography/SIFT/model_base.h:124:15: required from ‘class MR::DWI::Tractography::SIFT::ModelBase’ 124 | class ModelBase : public Mapping::Fixel_TD_map | ^~~~~~~~~ src/dwi/tractography/seeding/dynamic.h:207:49: required from here 207 | class Dynamic : public Base, public SIFT::ModelBase | ^~~~~~~~~~~~~~~~~~~~~~~~ src/dwi/fixel_map.h:187:10: warning: ‘bool MR::DWI::Fixel_map::operator()(const MR::DWI::FMLS::FOD_lobes&) [with Fixel = MR::DWI::Tractography::Seeding::Fixel_TD_seed]’ was hidden [-Woverloaded-virtual=] 187 | bool Fixel_map::operator() (const FMLS::FOD_lobes& in) | ^~~~~~~~~~~~~~~~ In file included from src/dwi/tractography/SIFT/model_base.h:30: src/dwi/tractography/mapping/fixel_td_map.h:70:14: note: by ‘bool MR::DWI::Tractography::Mapping::Fixel_TD_map::operator()(const MR::DWI::Tractography::Mapping::SetDixel&) [with Fixel = MR::DWI::Tractography::Seeding::Fixel_TD_seed]’ 70 | bool Fixel_TD_map::operator() (const SetDixel& in) | ^~~~~~~~~~~~~~~~~~~ (510/548) [CC] tmp/src/dwi/tractography/algorithms/iFOD2.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/algorithms/iFOD2.cpp -o tmp/src/dwi/tractography/algorithms/iFOD2.o (511/548) [LB] bin/dwi2mask g++ tmp/src/exec_version.o tmp/cmd/dwi2mask.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dwi2mask (512/548) [CC] tmp/src/dwi/tractography/seeding/dynamic.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/seeding/dynamic.cpp -o tmp/src/dwi/tractography/seeding/dynamic.o (513/548) [CC] tmp/src/dwi/tractography/seeding/basic.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/seeding/basic.cpp -o tmp/src/dwi/tractography/seeding/basic.o (514/548) [CC] tmp/src/dwi/tractography/tracking/early_exit.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/tracking/early_exit.cpp -o tmp/src/dwi/tractography/tracking/early_exit.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/algorithms/iFOD2.cpp -o tmp/src/dwi/tractography/algorithms/iFOD2.o: In file included from src/dwi/tractography/algorithms/iFOD2.cpp:17: src/dwi/tractography/algorithms/iFOD2.h: In member function ‘virtual MR::DWI::Tractography::Tracking::term_t MR::DWI::Tractography::Algorithms::iFOD2::next()’: src/dwi/tractography/algorithms/iFOD2.h:241:31: warning: unused variable ‘next_pos’ [-Wunused-variable] 241 | Eigen::Vector3f next_pos, next_dir; | ^~~~~~~~ src/dwi/tractography/algorithms/iFOD2.h:241:41: warning: unused variable ‘next_dir’ [-Wunused-variable] 241 | Eigen::Vector3f next_pos, next_dir; | ^~~~~~~~ (515/548) [CC] tmp/src/dwi/tractography/ACT/gmwmi.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/ACT/gmwmi.cpp -o tmp/src/dwi/tractography/ACT/gmwmi.o (516/548) [CC] tmp/src/dwi/tractography/seeding/gmwmi.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/seeding/gmwmi.cpp -o tmp/src/dwi/tractography/seeding/gmwmi.o (517/548) [CC] tmp/cmd/tsfsmooth.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tsfsmooth.cpp -o tmp/cmd/tsfsmooth.o (518/548) [LB] bin/mrregister g++ tmp/src/registration/transform/initialiser.o tmp/src/exec_version.o tmp/src/dwi/directions/predefined.o tmp/src/registration/transform/affine.o tmp/src/registration/nonlinear.o tmp/cmd/mrregister.o tmp/src/registration/transform/convergence_check.o tmp/src/registration/transform/initialiser_helpers.o tmp/src/registration/multi_contrast.o tmp/src/registration/transform/rigid.o tmp/src/registration/linear.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrregister (519/548) [CC] tmp/cmd/fixel2voxel.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/fixel2voxel.cpp -o tmp/cmd/fixel2voxel.o (520/548) [CC] tmp/cmd/voxel2fixel.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/voxel2fixel.cpp -o tmp/cmd/voxel2fixel.o (521/548) [CC] tmp/cmd/fixelconnectivity.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/fixelconnectivity.cpp -o tmp/cmd/fixelconnectivity.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/tractography/seeding/dynamic.cpp -o tmp/src/dwi/tractography/seeding/dynamic.o: In file included from src/dwi/tractography/SIFT/model_base.h:21, from src/dwi/tractography/seeding/dynamic.h:32, from src/dwi/tractography/seeding/dynamic.cpp:17: src/dwi/tractography/mapping/fixel_td_map.h: In instantiation of ‘class MR::DWI::Tractography::Mapping::Fixel_TD_map’: src/dwi/tractography/SIFT/model_base.h:124:15: required from ‘class MR::DWI::Tractography::SIFT::ModelBase’ 124 | class ModelBase : public Mapping::Fixel_TD_map | ^~~~~~~~~ src/dwi/tractography/seeding/dynamic.h:207:49: required from here 207 | class Dynamic : public Base, public SIFT::ModelBase | ^~~~~~~~~~~~~~~~~~~~~~~~ src/dwi/fixel_map.h:187:10: warning: ‘bool MR::DWI::Fixel_map::operator()(const MR::DWI::FMLS::FOD_lobes&) [with Fixel = MR::DWI::Tractography::Seeding::Fixel_TD_seed]’ was hidden [-Woverloaded-virtual=] 187 | bool Fixel_map::operator() (const FMLS::FOD_lobes& in) | ^~~~~~~~~~~~~~~~ In file included from src/dwi/tractography/SIFT/model_base.h:30: src/dwi/tractography/mapping/fixel_td_map.h:70:14: note: by ‘bool MR::DWI::Tractography::Mapping::Fixel_TD_map::operator()(const MR::DWI::Tractography::Mapping::SetDixel&) [with Fixel = MR::DWI::Tractography::Seeding::Fixel_TD_seed]’ 70 | bool Fixel_TD_map::operator() (const SetDixel& in) | ^~~~~~~~~~~~~~~~~~~ (522/548) [CC] tmp/cmd/fod2dec.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/fod2dec.cpp -o tmp/cmd/fod2dec.o (523/548) [CC] tmp/cmd/tsfdivide.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tsfdivide.cpp -o tmp/cmd/tsfdivide.o (524/548) [LB] bin/tsfsmooth g++ tmp/src/exec_version.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/cmd/tsfsmooth.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/file_base.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tsfsmooth (525/548) [CC] tmp/src/surface/filter/smooth.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/surface/filter/smooth.cpp -o tmp/src/surface/filter/smooth.o (526/548) [CC] tmp/cmd/meshfilter.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/meshfilter.cpp -o tmp/cmd/meshfilter.o (527/548) [LB] bin/tsfdivide g++ tmp/src/exec_version.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/seeding/list.o tmp/cmd/tsfdivide.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/file_base.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tsfdivide (528/548) [CC] tmp/cmd/dwidenoise.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/dwidenoise.cpp -o tmp/cmd/dwidenoise.o (529/548) [LB] bin/voxel2fixel g++ tmp/src/exec_version.o tmp/cmd/voxel2fixel.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/voxel2fixel (530/548) [CC] tmp/cmd/dirorder.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/dirorder.cpp -o tmp/cmd/dirorder.o (531/548) [LB] bin/fixelconnectivity g++ tmp/src/exec_version.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/directions/set.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/mapping/voxel.o tmp/src/dwi/tractography/resampling/endpoints.o tmp/src/dwi/tractography/resampling/downsampler.o tmp/src/dwi/tractography/resampling/upsampler.o tmp/src/fixel/matrix.o tmp/src/fixel/index_remapper.o tmp/src/dwi/tractography/mapping/mapper_plugins.o tmp/src/dwi/tractography/resampling/resampling.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/resampling/fixed_step_size.o tmp/src/dwi/tractography/mapping/twi_stats.o tmp/src/dwi/directions/predefined.o tmp/cmd/fixelconnectivity.o tmp/src/dwi/tractography/mapping/mapper.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/mapping/mapping.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/resampling/fixed_num_points.o tmp/src/dwi/tractography/resampling/arc.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/fixelconnectivity (532/548) [LB] bin/meshfilter g++ tmp/src/exec_version.o tmp/src/surface/freesurfer.o tmp/src/surface/filter/smooth.o tmp/src/surface/filter/base.o tmp/src/connectome/connectome.o tmp/src/surface/scalar.o tmp/src/connectome/lut.o tmp/src/surface/mesh.o tmp/src/surface/mesh_multi.o tmp/src/surface/polygon.o tmp/cmd/meshfilter.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/meshfilter (533/548) [CC] tmp/src/dwi/sdeconv/msmt_csd.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/sdeconv/msmt_csd.cpp -o tmp/src/dwi/sdeconv/msmt_csd.o (534/548) [CC] tmp/src/dwi/sdeconv/csd.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 src/dwi/sdeconv/csd.cpp -o tmp/src/dwi/sdeconv/csd.o (535/548) [CC] tmp/cmd/dwi2fod.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/dwi2fod.cpp -o tmp/cmd/dwi2fod.o (536/548) [CC] tmp/cmd/afdconnectivity.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/afdconnectivity.cpp -o tmp/cmd/afdconnectivity.o (537/548) [LB] bin/fod2dec g++ tmp/src/exec_version.o tmp/src/dwi/directions/predefined.o tmp/cmd/fod2dec.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/fod2dec (538/548) [CC] tmp/cmd/sh2response.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/sh2response.cpp -o tmp/cmd/sh2response.o (539/548) [LB] bin/fixel2voxel g++ tmp/src/exec_version.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/tractography/file_base.o tmp/cmd/fixel2voxel.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/fixel2voxel (540/548) [CC] tmp/cmd/dirsplit.o g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/dirsplit.cpp -o tmp/cmd/dirsplit.o (541/548) [LB] bin/dirorder g++ tmp/src/exec_version.o tmp/src/dwi/directions/file.o tmp/cmd/dirorder.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dirorder (542/548) [LB] bin/dirsplit g++ tmp/src/exec_version.o tmp/src/dwi/directions/file.o tmp/cmd/dirsplit.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dirsplit g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/tckgen.cpp -o tmp/cmd/tckgen.o: In file included from src/dwi/tractography/SIFT/model_base.h:21, from src/dwi/tractography/seeding/dynamic.h:32, from src/dwi/tractography/tracking/exec.h:36, from cmd/tckgen.cpp:23: src/dwi/tractography/mapping/fixel_td_map.h: In instantiation of ‘class MR::DWI::Tractography::Mapping::Fixel_TD_map’: src/dwi/tractography/SIFT/model_base.h:124:15: required from ‘class MR::DWI::Tractography::SIFT::ModelBase’ 124 | class ModelBase : public Mapping::Fixel_TD_map | ^~~~~~~~~ src/dwi/tractography/seeding/dynamic.h:207:49: required from here 207 | class Dynamic : public Base, public SIFT::ModelBase | ^~~~~~~~~~~~~~~~~~~~~~~~ src/dwi/fixel_map.h:187:10: warning: ‘bool MR::DWI::Fixel_map::operator()(const MR::DWI::FMLS::FOD_lobes&) [with Fixel = MR::DWI::Tractography::Seeding::Fixel_TD_seed]’ was hidden [-Woverloaded-virtual=] 187 | bool Fixel_map::operator() (const FMLS::FOD_lobes& in) | ^~~~~~~~~~~~~~~~ In file included from src/dwi/tractography/SIFT/model_base.h:30: src/dwi/tractography/mapping/fixel_td_map.h:70:14: note: by ‘bool MR::DWI::Tractography::Mapping::Fixel_TD_map::operator()(const MR::DWI::Tractography::Mapping::SetDixel&) [with Fixel = MR::DWI::Tractography::Seeding::Fixel_TD_seed]’ 70 | bool Fixel_TD_map::operator() (const SetDixel& in) | ^~~~~~~~~~~~~~~~~~~ In file included from cmd/tckgen.cpp:31: src/dwi/tractography/algorithms/iFOD2.h: In member function ‘virtual MR::DWI::Tractography::Tracking::term_t MR::DWI::Tractography::Algorithms::iFOD2::next()’: src/dwi/tractography/algorithms/iFOD2.h:241:31: warning: unused variable ‘next_pos’ [-Wunused-variable] 241 | Eigen::Vector3f next_pos, next_dir; | ^~~~~~~~ src/dwi/tractography/algorithms/iFOD2.h:241:41: warning: unused variable ‘next_dir’ [-Wunused-variable] 241 | Eigen::Vector3f next_pos, next_dir; | ^~~~~~~~ In file included from src/dwi/tractography/mapping/mapper_plugins.h:24, from src/dwi/tractography/mapping/mapper.h:31, from src/dwi/tractography/tracking/exec.h:32: ./core/math/SH.h: In function ‘void MR::Math::SH::derivatives(const VectorType&, int, typename VectorType::Scalar, typename VectorType::Scalar, typename VectorType::Scalar&, typename VectorType::Scalar&, typename VectorType::Scalar&, typename VectorType::Scalar&, typename VectorType::Scalar&, typename VectorType::Scalar&, PrecomputedAL*) [with VectorType = Eigen::Matrix]’: ./core/math/SH.h:604:33: warning: ‘*AL.2174[0]’ may be used uninitialized [-Wmaybe-uninitialized] 604 | amplitude = sh[0] * AL[0]; | ~~^ (543/548) [LB] bin/tckgen g++ tmp/src/dwi/tractography/mapping/voxel.o tmp/src/dwi/directions/mask.o tmp/src/dwi/tractography/SIFT/proc_mask.o tmp/src/dwi/tractography/seeding/seeding.o tmp/cmd/tckgen.o tmp/src/dwi/tractography/mapping/mapper_plugins.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/tracking/tractography.o tmp/src/dwi/tractography/tracking/write_kernel.o tmp/src/dwi/tractography/ACT/act.o tmp/src/dwi/directions/predefined.o tmp/src/dwi/tractography/tracking/method.o tmp/src/dwi/tractography/mapping/mapper.o tmp/src/dwi/tractography/algorithms/iFOD1.o tmp/src/dwi/tractography/mapping/mapping.o tmp/src/dwi/tractography/tracking/shared.o tmp/src/dwi/tractography/algorithms/iFOD2.o tmp/src/dwi/tractography/rng.o tmp/src/dwi/tractography/seeding/list.o tmp/src/dwi/directions/set.o tmp/src/exec_version.o tmp/src/dwi/tractography/resampling/endpoints.o tmp/src/dwi/tractography/resampling/downsampler.o tmp/src/dwi/tractography/resampling/upsampler.o tmp/src/dwi/tractography/mapping/fixel_td_map.o tmp/src/dwi/tractography/seeding/dynamic.o tmp/src/dwi/tractography/seeding/basic.o tmp/src/dwi/tractography/resampling/resampling.o tmp/src/dwi/tractography/resampling/fixed_step_size.o tmp/src/dwi/tractography/mapping/twi_stats.o tmp/src/dwi/tractography/tracking/early_exit.o tmp/src/dwi/tractography/ACT/gmwmi.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/fmls.o tmp/src/dwi/tractography/resampling/fixed_num_points.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/seeding/gmwmi.o tmp/src/dwi/tractography/resampling/arc.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/tckgen (544/548) [LB] bin/mrmath g++ tmp/src/exec_version.o tmp/cmd/mrmath.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/mrmath (545/548) [LB] bin/sh2response g++ tmp/src/exec_version.o tmp/cmd/sh2response.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/sh2response g++ -c -std=c++14 -DMRTRIX_BUILD_TYPE="release version with openmp" -pthread -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/mrtrix3-3.0.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/aarch64-linux-gnu -isystem /usr/include/webp -DEIGEN_FFTW_DEFAULT -fopenmp -Wall -O3 -DNDEBUG -Isrc -I./core -Icmd -isystem /usr/include/eigen3 cmd/afdconnectivity.cpp -o tmp/cmd/afdconnectivity.o: In file included from src/dwi/tractography/SIFT/model_base.h:21, from cmd/afdconnectivity.cpp:26: src/dwi/tractography/mapping/fixel_td_map.h: In instantiation of ‘class MR::DWI::Tractography::Mapping::Fixel_TD_map’: src/dwi/tractography/SIFT/model_base.h:124:15: required from ‘class MR::DWI::Tractography::SIFT::ModelBase’ 124 | class ModelBase : public Mapping::Fixel_TD_map | ^~~~~~~~~ cmd/afdconnectivity.cpp:123:57: required from here 123 | class AFDConnectivity : public DWI::Tractography::SIFT::ModelBase | ^~~~~~~~~~~~~~~~ src/dwi/fixel_map.h:187:10: warning: ‘bool MR::DWI::Fixel_map::operator()(const MR::DWI::FMLS::FOD_lobes&) [with Fixel = Fixel]’ was hidden [-Woverloaded-virtual=] 187 | bool Fixel_map::operator() (const FMLS::FOD_lobes& in) | ^~~~~~~~~~~~~~~~ In file included from src/dwi/tractography/SIFT/model_base.h:30: src/dwi/tractography/mapping/fixel_td_map.h:70:14: note: by ‘bool MR::DWI::Tractography::Mapping::Fixel_TD_map::operator()(const MR::DWI::Tractography::Mapping::SetDixel&) [with Fixel = Fixel]’ 70 | bool Fixel_TD_map::operator() (const SetDixel& in) | ^~~~~~~~~~~~~~~~~~~ (546/548) [LB] bin/afdconnectivity g++ tmp/src/dwi/tractography/rng.o tmp/src/dwi/directions/set.o tmp/src/dwi/tractography/seeding/list.o tmp/src/exec_version.o tmp/cmd/afdconnectivity.o tmp/src/dwi/tractography/mapping/voxel.o tmp/src/dwi/directions/mask.o tmp/src/dwi/tractography/resampling/endpoints.o tmp/src/dwi/tractography/mapping/fixel_td_map.o tmp/src/dwi/tractography/resampling/upsampler.o tmp/src/dwi/tractography/SIFT/proc_mask.o tmp/src/dwi/tractography/mapping/mapper_plugins.o tmp/src/dwi/tractography/resampling/resampling.o tmp/src/dwi/tractography/properties.o tmp/src/dwi/tractography/resampling/fixed_step_size.o tmp/src/dwi/tractography/mapping/twi_stats.o tmp/src/dwi/tractography/ACT/act.o tmp/src/dwi/directions/predefined.o tmp/src/dwi/tractography/file_base.o tmp/src/dwi/tractography/mapping/mapper.o tmp/src/dwi/tractography/roi.o tmp/src/dwi/fmls.o tmp/src/dwi/tractography/mapping/mapping.o tmp/src/dwi/tractography/resampling/downsampler.o tmp/src/dwi/tractography/resampling/fixed_num_points.o tmp/src/dwi/tractography/resampling/arc.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/afdconnectivity (547/548) [LB] bin/dwi2fod g++ tmp/src/exec_version.o tmp/src/dwi/directions/predefined.o tmp/src/dwi/sdeconv/msmt_csd.o tmp/src/dwi/sdeconv/csd.o tmp/cmd/dwi2fod.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dwi2fod (548/548) [LB] bin/dwidenoise g++ tmp/src/exec_version.o tmp/cmd/dwidenoise.o -lmrtrix -Wl,--sort-common,--as-needed -pthread -Wl,-z,relro -Wl,-z,now -lz -ltiff -lfftw3 -fopenmp -Wl,-rpath,$ORIGIN/../lib -L./lib -o bin/dwidenoise make[1]: Leaving directory '/build/reproducible-path/mrtrix3-3.0.8' create-stamp debian/debhelper-build-stamp dh_prep -a debian/rules override_dh_install make[1]: Entering directory '/build/reproducible-path/mrtrix3-3.0.8' dh_install # Remove __pycache__ dirs that were created in build time tests find debian -name __pycache__ -type d | xargs rm -rf make[1]: Leaving directory '/build/reproducible-path/mrtrix3-3.0.8' dh_installdocs -a dh_installchangelogs -a dh_installman -a dh_perl -a debian/rules override_dh_link make[1]: Entering directory '/build/reproducible-path/mrtrix3-3.0.8' cp debian/mrtrix3.links.in debian/mrtrix3.links : # Generate symlinks for all the mr* commands for f in debian/mrtrix3/usr/lib/mrtrix3/bin/*; do \ bn=$(basename $f); \ if [ "$bn" = "dirsplit" ]; then \ continue; \ fi; \ echo "usr/lib/mrtrix3/bin/$bn usr/bin/$bn" >> debian/mrtrix3.links; \ echo "/usr/share/man/man1/mrtrix3.1.gz /usr/share/man/man1/$bn.1.gz" >> debian/mrtrix3.links; \ done echo "/usr/share/mrtrix3/matlab /usr/share/matlab/site/m/mrtrix" >> debian/mrtrix3.links echo "/usr/share/mrtrix3/matlab /usr/share/octave/site/m/mrtrix" >> debian/mrtrix3.links dh_link make[1]: Leaving directory '/build/reproducible-path/mrtrix3-3.0.8' dh_missing -a dh_strip -a dh_makeshlibs -a debian/rules override_dh_shlibdeps make[1]: Entering directory '/build/reproducible-path/mrtrix3-3.0.8' dh_shlibdeps -l /build/reproducible-path/mrtrix3-3.0.8/lib dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-aarch64.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged make[1]: Leaving directory '/build/reproducible-path/mrtrix3-3.0.8' dh_fixperms -a dh_strip_nondeterminism -a debian/rules override_dh_compress make[1]: Entering directory '/build/reproducible-path/mrtrix3-3.0.8' dh_compress -X.html make[1]: Leaving directory '/build/reproducible-path/mrtrix3-3.0.8' dh_installdeb -a dh_computeautosubstvars -a dh_gencontrol -a dpkg-gencontrol: warning: Depends field of package mrtrix3: substitution variable ${misc:Depends} used, but is not defined dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'mrtrix3-dbgsym' in '../mrtrix3-dbgsym_3.0.8-4_arm64.deb'. dpkg-deb: building package 'mrtrix3' in '../mrtrix3_3.0.8-4_arm64.deb'. dpkg-genbuildinfo --build=any -O../mrtrix3_3.0.8-4_arm64.buildinfo dpkg-genchanges --build=any -O../mrtrix3_3.0.8-4_arm64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2026-10-27T08:50:39Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes Tue, 27 Oct 2026 08:50:39 +0000 | +------------------------------------------------------------------------------+ mrtrix3_3.0.8-4_arm64.changes: ------------------------------ Format: 1.8 Date: Thu, 22 Oct 2026 01:20:00 +0200 Source: mrtrix3 Binary: mrtrix3 mrtrix3-dbgsym Architecture: arm64 Version: 3.0.8-4 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Santiago Vila Description: mrtrix3 - diffusion-weighted MRI white matter tractography Closes: 1114645 1151587 Changes: mrtrix3 (3.0.8-4) unstable; urgency=medium . * Team upload. * Honor parallel=n in DEB_BUILD_OPTIONS. Closes: #1114645. * Allow building the package on machines with less than 4 CPUs. Closes: #1151587. * Use "rm -f" to clean things in debian/rules. Checksums-Sha1: 7d43c6d0f092a6b7c58a78a06c46f5c066f220c6 687280888 mrtrix3-dbgsym_3.0.8-4_arm64.deb 9a39aaaea0fa0d962244e6b4b966fea53d790245 16435 mrtrix3_3.0.8-4_arm64.buildinfo 1698e53f463d5fd78ee2249edccb1a67bc3a00d5 8878220 mrtrix3_3.0.8-4_arm64.deb Checksums-Sha256: 41fa6c46c73005f54e6274d46ca704c155d87925fd405db38baffb67722c864b 687280888 mrtrix3-dbgsym_3.0.8-4_arm64.deb 9b00718eb9599773f09dc3147475fd1a8fc4de0c308f263b24b3c5f4b9a34115 16435 mrtrix3_3.0.8-4_arm64.buildinfo d6915495ba37d09ea634e4dcc37b85499006cbf8d5c70116825cb51b82ec5c62 8878220 mrtrix3_3.0.8-4_arm64.deb Files: bf63bb959e463a775b88431cf8b2285f 687280888 debug optional mrtrix3-dbgsym_3.0.8-4_arm64.deb c3cd0aa833e242cc5de1bc547dddcd19 16435 science optional mrtrix3_3.0.8-4_arm64.buildinfo d4fcdf3436d2b59b891678ded0a8cd3e 8878220 science optional mrtrix3_3.0.8-4_arm64.deb +------------------------------------------------------------------------------+ | Buildinfo Tue, 27 Oct 2026 08:50:40 +0000 | +------------------------------------------------------------------------------+ Format: 1.0 Source: mrtrix3 Binary: mrtrix3 mrtrix3-dbgsym Architecture: arm64 Version: 3.0.8-4 Checksums-Md5: bf63bb959e463a775b88431cf8b2285f 687280888 mrtrix3-dbgsym_3.0.8-4_arm64.deb d4fcdf3436d2b59b891678ded0a8cd3e 8878220 mrtrix3_3.0.8-4_arm64.deb Checksums-Sha1: 7d43c6d0f092a6b7c58a78a06c46f5c066f220c6 687280888 mrtrix3-dbgsym_3.0.8-4_arm64.deb 1698e53f463d5fd78ee2249edccb1a67bc3a00d5 8878220 mrtrix3_3.0.8-4_arm64.deb Checksums-Sha256: 41fa6c46c73005f54e6274d46ca704c155d87925fd405db38baffb67722c864b 687280888 mrtrix3-dbgsym_3.0.8-4_arm64.deb d6915495ba37d09ea634e4dcc37b85499006cbf8d5c70116825cb51b82ec5c62 8878220 mrtrix3_3.0.8-4_arm64.deb Build-Origin: Debian Build-Architecture: arm64 Build-Date: Tue, 27 Oct 2026 08:50:33 +0000 Build-Path: /build/reproducible-path/mrtrix3-3.0.8 Installed-Build-Depends: autoconf (= 2.73-2), automake (= 1:1.19-3), autopoint (= 1.0-5), autotools-dev (= 20240727.1+nmu1), base-files (= 14.2), base-passwd (= 3.6.8+b1), bash (= 5.3-4), bc (= 1.07.1-4+b2), binutils (= 2.47.50.20261021-1), binutils-aarch64-linux-gnu (= 2.47.50.20261021-1), binutils-common (= 2.47.50.20261021-1), bsdextrautils (= 2.42.4-1), build-essential (= 12.12), bzip2 (= 1.0.8-6+b2), comerr-dev (= 2.1-1.47.4-1+b2), coreutils (= 9.10-1), cpp (= 4:16.1.0-3), cpp-16 (= 16.2.0-3), cpp-16-aarch64-linux-gnu (= 16.2.0-3), cpp-aarch64-linux-gnu (= 4:16.1.0-3), dash (= 0.5.12-12+b1), debconf (= 1.5.92), debhelper (= 14.5), debianutils (= 5.24), dh-autoreconf (= 23), dh-python (= 7.20261019), dh-strip-nondeterminism (= 1.15.1-1), diffutils (= 1:3.12-1+b1), dpkg (= 1.23.11), dpkg-dev (= 1.23.11), dwz (= 0.17-1), file (= 1:5.47-4), findutils (= 4.11.0-3), fontconfig (= 2.17.1-5), fontconfig-config (= 2.17.1-5), fonts-dejavu-core (= 2.37-9), fonts-dejavu-mono (= 2.37-9), g++ (= 4:16.1.0-3), g++-16 (= 16.2.0-3), g++-16-aarch64-linux-gnu (= 16.2.0-3), g++-aarch64-linux-gnu (= 4:16.1.0-3), gcc (= 4:16.1.0-3), gcc-16 (= 16.2.0-3), gcc-16-aarch64-linux-gnu (= 16.2.0-3), gcc-16-base (= 16.2.0-3), gcc-aarch64-linux-gnu (= 4:16.1.0-3), gettext (= 1.0-5), gettext-base (= 1.0-5), gfortran (= 4:16.1.0-3), gfortran-16 (= 16.2.0-3), gfortran-16-aarch64-linux-gnu (= 16.2.0-3), gfortran-aarch64-linux-gnu (= 4:16.1.0-3), grep (= 3.12-1+b1), groff-base (= 1.24.2-2), gzip (= 1.14-1), hdf5-helpers (= 2.2.0+repack-5), hicolor-icon-theme (= 0.18-2), hostname (= 3.25+b1), ibverbs-providers (= 65.0-1.1), imagemagick (= 8:7.1.2.33+dfsg1-1), imagemagick-7-common (= 8:7.1.2.33+dfsg1-1), imagemagick-7.q16 (= 8:7.1.2.33+dfsg1-1), init-system-helpers (= 1.69+nmu3), intltool-debian (= 0.35.0+20060710.6), krb5-multidev (= 1.22.1-3), libacl1 (= 2.4.0-1), libaec-dev (= 1.1.7-1), libaec0 (= 1.1.7-1), libamd-comgr3 (= 7.0.2+dfsg-3), libamd3 (= 1:7.14.1+dfsg-1), libamdhip64-6 (= 6.4.3-5), libarchive-zip-perl (= 1.68-1), libarpack2t64 (= 3.9.1-6+b2), libasan8 (= 16.2.0-3), libasound2-data (= 1.2.16.1-2), libasound2t64 (= 1.2.16.1-2), libatomic1 (= 16.2.0-3), libattr1 (= 1:2.6.0-1), libaudit-common (= 1:4.2.1-1), libaudit1 (= 1:4.2.1-1), libavahi-client3 (= 0.8-18), libavahi-common-data (= 0.8-18), libavahi-common3 (= 0.8-18), libb2-1 (= 0.98.1-1.1+b3), libbinutils (= 2.47.50.20261021-1), libblas-dev (= 3.12.1-8), libblas3 (= 3.12.1-8), libblkid1 (= 2.42.4-1), libbrotli-dev (= 1.2.0-4+b1), libbrotli1 (= 1.2.0-4+b1), libbsd0 (= 0.12.2-3), libbz2-1.0 (= 1.0.8-6+b2), libc-bin (= 2.43-7), libc-dev-bin (= 2.43-7), libc-gconv-modules-extra (= 2.43-7), libc6 (= 2.43-7), libc6-dev (= 2.43-7), libcairo2 (= 1.18.4-3+b1), libcamd3 (= 1:7.14.1+dfsg-1), libcap-ng0 (= 0.9.6-1), libcc1-0 (= 16.2.0-3), libccolamd3 (= 1:7.14.1+dfsg-1), libcholmod5 (= 1:7.14.1+dfsg-1), libclang-common-21-dev (= 1:21.1.8-14), libcolamd3 (= 1:7.14.1+dfsg-1), libcom-err2 (= 1.47.4-1+b2), libcrypt1 (= 1:4.5.2+20251210-1), libctf-nobfd0 (= 2.47.50.20261021-1), libctf0 (= 2.47.50.20261021-1), libcups2t64 (= 2.4.20-1), libcurl4-gnutls (= 8.23.0-1), libcurl4-openssl-dev (= 8.23.0-1), libcurl4t64 (= 8.23.0-1), libcxsparse4 (= 1:7.14.1+dfsg-1), libdatrie1 (= 0.2.14-2), libdav1d7 (= 1.5.4-1), libdb5.3t64 (= 5.3.28+dfsg2-11+b1), libdbus-1-3 (= 1.16.2-8), libde265-0 (= 1.1.3-1+b1), libdebconfclient0 (= 0.283), libdebhelper-perl (= 14.5), libdecor-0-0 (= 0.2.5-1+b1), libdeflate-dev (= 1.25-1), libdeflate0 (= 1.25-1), libdouble-conversion3 (= 3.4.0-1+b1), libdpkg-perl (= 1.23.11), libdrm-amdgpu1 (= 2.4.134-3), libdrm-common (= 2.4.134-3), libdrm2 (= 2.4.134-3), libduktape207 (= 2.7.0-2+b3), libedit2 (= 3.1-20260512-1), libegl-dev (= 1.7.0-3+b1), libegl-mesa0 (= 26.2.5-1), libegl1 (= 1.7.0-3+b1), libeigen3-dev (= 5.0.1-3), libelf1t64 (= 0.196-1), libesmtp6 (= 1.1.0-3.2+b2), libevdev2 (= 1.14.0+dfsg-1), libevent-2.1-7t64 (= 2.1.13-stable-1), libevent-core-2.1-7t64 (= 2.1.13-stable-1), libevent-pthreads-2.1-7t64 (= 2.1.13-stable-1), libexpat1 (= 2.9.0-1), libfabric1 (= 2.1.0-1.1+b2), libffi8 (= 3.8.0-2), libfftw3-bin (= 3.3.11-1), libfftw3-dev (= 3.3.11-1), libfftw3-double3 (= 3.3.11-1), libfftw3-long3 (= 3.3.11-1), libfftw3-single3 (= 3.3.11-1), libfile-stripnondeterminism-perl (= 1.15.1-1), libflac14 (= 1.5.0+ds-5+b1), libfltk-gl1.4 (= 1.4.4-4), libfltk1.4 (= 1.4.4-4), libfontconfig1 (= 2.17.1-5), libfreetype6 (= 2.14.3+dfsg-3), libfribidi0 (= 1.0.16-5+b1), libfuse3-4 (= 3.18.3-1), libgbm1 (= 26.2.5-1), libgcc-16-dev (= 16.2.0-3), libgcc-s1 (= 16.2.0-3), libgdbm-compat4t64 (= 1.26-1+b2), libgdbm6t64 (= 1.26-1+b2), libgfortran-16-dev (= 16.2.0-3), libgfortran5 (= 16.2.0-3), libgl-dev (= 1.7.0-3+b1), libgl1 (= 1.7.0-3+b1), libgl1-mesa-dri (= 26.2.5-1), libgl2ps1.4 (= 1.4.2+dfsg1-4+b1), libglib2.0-0t64 (= 2.90.1-2), libglpk40 (= 5.0-3), libglu1-mesa (= 9.0.2-1.1+b4), libglu1-mesa-dev (= 9.0.2-1.1+b4), libglvnd0 (= 1.7.0-3+b1), libglx-dev (= 1.7.0-3+b1), libglx-mesa0 (= 26.2.5-1), libglx0 (= 1.7.0-3+b1), libgmp-dev (= 2:6.3.0+dfsg-5+b2), libgmp10 (= 2:6.3.0+dfsg-5+b2), libgmpxx4ldbl (= 2:6.3.0+dfsg-5+b2), libgnutls-dane0t64 (= 3.8.13-1), libgnutls28-dev (= 3.8.13-1), libgnutls30t64 (= 3.8.13-1), libgomp1 (= 16.2.0-3), libgprofng0 (= 2.47.50.20261021-1), libgraphicsmagick++-q16-12t64 (= 1.4+really1.3.49-1), libgraphicsmagick-q16-3t64 (= 1.4+really1.3.49-1), libgraphite2-3 (= 1.3.15-2), libgsl-dev (= 2.8+dfsg-6+b1), libgsl28 (= 2.8+dfsg-6+b1), libgslcblas0 (= 2.8+dfsg-6+b1), libgssapi-krb5-2 (= 1.22.1-3), libgssrpc4t64 (= 1.22.1-3), libgudev-1.0-0 (= 238-7+b2), libharfbuzz0b (= 12.3.2-2+b2), libhdf5-320 (= 2.2.0+repack-5), libhdf5-cpp-320 (= 2.2.0+repack-5), libhdf5-dev (= 2.2.0+repack-5), libhdf5-fortran-320 (= 2.2.0+repack-5), libhdf5-hl-320 (= 2.2.0+repack-5), libhdf5-hl-cpp-320 (= 2.2.0+repack-5), libhdf5-hl-fortran-320 (= 2.2.0+repack-5), libhdf5-openmpi-320 (= 2.2.0+repack-5), libheif-plugin-dav1d (= 1.23.6-2), libheif-plugin-libde265 (= 1.23.6-2), libheif1 (= 1.23.6-2), libhogweed6t64 (= 3.10.2-1+b1), libhsa-runtime64-1 (= 6.4.3+dfsg-5), libhwasan0 (= 16.2.0-3), libhwloc-plugins (= 2.15.0-2), libhwloc15 (= 2.15.0-2), libhwy1t64 (= 1.3.0-5.1), libibmad5 (= 65.0-1.1), libibumad3 (= 65.0-1.1), libibverbs1 (= 65.0-1.1), libice6 (= 2:1.1.1-1+b2), libicu78 (= 78.3-2), libidn2-0 (= 2.3.8-5), libidn2-dev (= 2.3.8-5), libinput-bin (= 1.31.3-1), libinput10 (= 1.31.3-1), libintl-perl (= 1.37-1), libisl23 (= 0.28-1), libitm1 (= 16.2.0-3), libjack-jackd2-0 (= 1.9.22~dfsg-6), libjansson4 (= 2.15.1-1), libjbig-dev (= 2.1-6.1+b3), libjbig0 (= 2.1-6.1+b3), libjpeg-dev (= 1:3.1.3-4), libjpeg62-turbo (= 1:3.1.3-4), libjpeg62-turbo-dev (= 1:3.1.3-4), libjxl0.11 (= 0.11.2-5.1), libk5crypto3 (= 1.22.1-3), libkadm5clnt-mit12 (= 1.22.1-3), libkadm5srv-mit12 (= 1.22.1-3), libkdb5-10t64 (= 1.22.1-3), libkeyutils1 (= 1.6.3-6+b2), libkrb5-3 (= 1.22.1-3), libkrb5-dev (= 1.22.1-3), libkrb5support0 (= 1.22.1-3), liblapack-dev (= 3.12.1-8), liblapack3 (= 3.12.1-8), liblcms2-2 (= 2.19.1-1), libldap-dev (= 2.6.14+dfsg-2), libldap2 (= 2.6.14+dfsg-2), liblerc-dev (= 4.2.0+ds-1), liblerc4 (= 4.2.0+ds-1), libllvm21 (= 1:21.1.8-14), libllvm22 (= 1:22.1.8-3), liblqr-1-0 (= 0.4.2-2.2+b1), liblsan0 (= 16.2.0-3), libltdl7 (= 2.6.2-3), liblzma-dev (= 5.8.4-1), liblzma5 (= 5.8.4-1), libmagic-mgc (= 1:5.47-4), libmagic1t64 (= 1:5.47-4), libmagickcore-7.q16-10 (= 8:7.1.2.33+dfsg1-1), libmagickwand-7.q16-10 (= 8:7.1.2.33+dfsg1-1), libmd0 (= 1.3.0-1), libmd4c0 (= 0.5.3-1), libmount1 (= 2.42.4-1), libmp3lame0 (= 4.0-1), libmpc3 (= 1.3.1-3), libmpfr6 (= 4.2.2-3), libmpg123-0t64 (= 1.33.7-1), libmtdev1t64 (= 1.1.7-1+b2), libncurses-dev (= 6.6+20260608-2), libncurses6 (= 6.6+20260608-2), libncursesw6 (= 6.6+20260608-2), libnettle8t64 (= 3.10.2-1+b1), libnghttp2-14 (= 1.70.0-1), libnghttp2-dev (= 1.70.0-1), libnghttp3-9 (= 1.17.0-1), libnghttp3-dev (= 1.17.0-1), libngtcp2-16 (= 1.24.0-1), libngtcp2-crypto-gnutls8 (= 1.24.0-1), libngtcp2-crypto-ossl-dev (= 1.24.0-1), libngtcp2-crypto-ossl0 (= 1.24.0-1), libngtcp2-dev (= 1.24.0-1), libnl-3-200 (= 3.12.0-2+b1), libnl-route-3-200 (= 3.12.0-2+b1), libnuma1 (= 2.0.19-1+b2), libogg0 (= 1.3.6-2+b1), libopengl-dev (= 1.7.0-3+b1), libopengl0 (= 1.7.0-3+b1), libopenjp2-7 (= 2.5.4-1.1), libopenmpi40 (= 6.0.0~rc2-2), libopus0 (= 1.6.1-1+b1), libp11-kit-dev (= 0.26.5-1), libp11-kit0 (= 0.26.5-1), libpam-modules (= 1.7.0-8), libpam-modules-bin (= 1.7.0-8), libpam-runtime (= 1.7.0-8), libpam0g (= 1.7.0-8), libpango-1.0-0 (= 1.58.2-1), libpangocairo-1.0-0 (= 1.58.2-1), libpangoft2-1.0-0 (= 1.58.2-1), libpciaccess0 (= 0.19-2), libpcre2-16-0 (= 10.48-3.1), libpcre2-8-0 (= 10.48-3.1), libperl5.42 (= 5.42.3-1), libpipeline1 (= 1.5.8-3), libpixman-1-0 (= 0.46.4-1+b2), libpkgconf7 (= 2.5.1-4), libpmix2t64 (= 7.0.0~rc1-2), libpng16-16t64 (= 1.6.59-1), libportaudio2 (= 19.7.0-1+b1), libproc2-1 (= 2:4.0.7-1), libproxy1v5 (= 0.5.12-3), libpsl-dev (= 0.23.3-1), libpsl5t64 (= 0.23.3-1), libpython3-stdlib (= 3.14.7-3), libpython3.14-minimal (= 3.14.8-1), libpython3.14-stdlib (= 3.14.8-1), libqhull-r8.0 (= 2020.2-9), libqrupdate1 (= 1.2.0-1), libqscintilla2-qt6-15 (= 2.14.1+dfsg-4), libqscintilla2-qt6-l10n (= 2.14.1+dfsg-4), libqt5concurrent5t64 (= 5.15.19+dfsg-5), libqt5core5t64 (= 5.15.19+dfsg-5), libqt5dbus5t64 (= 5.15.19+dfsg-5), libqt5gui5t64 (= 5.15.19+dfsg-5), libqt5network5t64 (= 5.15.19+dfsg-5), libqt5opengl5-dev (= 5.15.19+dfsg-5), libqt5opengl5t64 (= 5.15.19+dfsg-5), libqt5printsupport5t64 (= 5.15.19+dfsg-5), libqt5sql5t64 (= 5.15.19+dfsg-5), libqt5svg5 (= 5.15.19-2), libqt5svg5-dev (= 5.15.19-2), libqt5test5t64 (= 5.15.19+dfsg-5), libqt5widgets5t64 (= 5.15.19+dfsg-5), libqt5xml5t64 (= 5.15.19+dfsg-5), libqt6core5compat6 (= 6.11.2-2), libqt6core6t64 (= 6.11.2+dfsg-6), libqt6dbus6 (= 6.11.2+dfsg-6), libqt6gui6 (= 6.11.2+dfsg-6), libqt6help6 (= 6.11.2-2), libqt6network6 (= 6.11.2+dfsg-6), libqt6opengl6 (= 6.11.2+dfsg-6), libqt6openglwidgets6 (= 6.11.2+dfsg-6), libqt6printsupport6 (= 6.11.2+dfsg-6), libqt6sql6 (= 6.11.2+dfsg-6), libqt6widgets6 (= 6.11.2+dfsg-6), libqt6xml6 (= 6.11.2+dfsg-6), libraw25 (= 0.22.1-1), librdmacm1t64 (= 65.0-1.1), libreadline-dev (= 8.3-4), libreadline8t64 (= 8.3-4), librtmp-dev (= 2.6-1), librtmp1 (= 2.6-1), libsamplerate0 (= 0.2.2-4+b3), libsasl2-2 (= 2.1.28+dfsg1-12), libsasl2-modules-db (= 2.1.28+dfsg1-12), libseccomp2 (= 2.6.1-1+b1), libselinux1 (= 3.11-2.1), libsensors-config (= 1:3.6.2-2), libsensors5 (= 1:3.6.2-2+b2), libsframe3 (= 2.47.50.20261021-1), libsharpyuv-dev (= 1.6.0-0.1), libsharpyuv0 (= 1.6.0-0.1), libsm6 (= 2:1.2.6-1+b2), libsmartcols1 (= 2.42.4-1), libsndfile1 (= 1.2.2-4+b1), libspqr4 (= 1:7.14.1+dfsg-1), libsqlite3-0 (= 3.53.4-2), libssh2-1-dev (= 1.11.1-6), libssh2-1t64 (= 1.11.1-6), libssl-dev (= 3.6.5-1), libssl3t64 (= 3.6.5-1), libstdc++-16-dev (= 16.2.0-3), libstdc++6 (= 16.2.0-3), libsuitesparseconfig7 (= 1:7.14.1+dfsg-1), libsystemd-shared (= 262.1-1), libsystemd0 (= 262.1-1), libsz2 (= 1.1.7-1), libtasn1-6 (= 4.21.0-2+b1), libtasn1-6-dev (= 4.21.0-2+b1), libtext-charwidth-perl (= 0.04-12+b1), libtext-unidecode-perl (= 1.30-3), libtext-wrapi18n-perl (= 0.06-11), libthai-data (= 0.1.30-3), libthai0 (= 0.1.30-3), libtiff-dev (= 4.7.2-1), libtiff6 (= 4.7.2-1), libtiffxx6 (= 4.7.2-1), libtinfo6 (= 6.6+20260608-2), libtool (= 2.6.2-3), libts0t64 (= 1.22-1.1+b2), libtsan2 (= 16.2.0-3), libubsan1 (= 16.2.0-3), libucc1 (= 1.9.0-1), libuchardet0 (= 0.0.8-2+b2), libucx0 (= 1.22.0-2), libudev1 (= 262.1-1), libumfpack6 (= 1:7.14.1+dfsg-1), libunbound8 (= 1.26.2-1), libunistring-dev (= 1.4.2-1), libunistring5 (= 1.4.2-1), liburing2 (= 2.15-1), libuuid1 (= 2.42.4-1), libvorbis0a (= 1.3.7-3+b2), libvorbisenc2 (= 1.3.7-3+b2), libvulkan-dev (= 1.4.363.0-1), libvulkan1 (= 1.4.363.0-1), libwacom-common (= 2.20.0-1), libwacom9 (= 2.20.0-1), libwayland-client0 (= 1.26.0-1), libwayland-cursor0 (= 1.26.0-1), libwayland-egl1 (= 1.26.0-1), libwebp-dev (= 1.6.0-0.1), libwebp7 (= 1.6.0-0.1), libwebpdecoder3 (= 1.6.0-0.1), libwebpdemux2 (= 1.6.0-0.1), libwebpmux3 (= 1.6.0-0.1), libwmflite-0.2-7 (= 0.2.14-1), libx11-6 (= 2:1.8.13-1), libx11-data (= 2:1.8.13-1), libx11-dev (= 2:1.8.13-1), libx11-xcb1 (= 2:1.8.13-1), libxau-dev (= 1:1.0.11-1+b2), libxau6 (= 1:1.0.11-1+b2), libxcb-cursor0 (= 0.1.6-1), libxcb-dri3-0 (= 1.17.0-2+b2), libxcb-glx0 (= 1.17.0-2+b2), libxcb-icccm4 (= 0.4.2-1+b2), libxcb-image0 (= 0.4.0-2+b3), libxcb-keysyms1 (= 0.4.1-1+b2), libxcb-present0 (= 1.17.0-2+b2), libxcb-randr0 (= 1.17.0-2+b2), libxcb-render-util0 (= 0.3.10-1+b2), libxcb-render0 (= 1.17.0-2+b2), libxcb-shape0 (= 1.17.0-2+b2), libxcb-shm0 (= 1.17.0-2+b2), libxcb-sync1 (= 1.17.0-2+b2), libxcb-util1 (= 0.4.1-1+b2), libxcb-xfixes0 (= 1.17.0-2+b2), libxcb-xinerama0 (= 1.17.0-2+b2), libxcb-xinput0 (= 1.17.0-2+b2), libxcb-xkb1 (= 1.17.0-2+b2), libxcb1 (= 1.17.0-2+b2), libxcb1-dev (= 1.17.0-2+b2), libxcursor1 (= 1:1.2.3-1+b2), libxdmcp-dev (= 1:1.1.5-2+b1), libxdmcp6 (= 1:1.1.5-2+b1), libxext-dev (= 2:1.3.4-1+b4), libxext6 (= 2:1.3.4-1+b4), libxfixes3 (= 1:6.0.0-2+b5), libxinerama1 (= 2:1.1.4-3+b5), libxkbcommon-x11-0 (= 1.13.1-1), libxkbcommon0 (= 1.13.1-1), libxml-libxml-perl (= 2.0207+dfsg+really+2.0134-8+b1), libxml-namespacesupport-perl (= 1.12-2), libxml-sax-base-perl (= 1.09-3), libxml-sax-perl (= 1.02+dfsg-5), libxml2-16 (= 2.15.4+dfsg-1), libxnvctrl0 (= 535.171.04-1+b3), libxrender1 (= 1:0.9.12-1+b2), libxshmfence1 (= 1.3.3-1+b2), libxxf86vm1 (= 1:1.1.4-2+b1), libz3-4 (= 4.13.3-1.1), libzstd-dev (= 1.5.7+dfsg-4), libzstd1 (= 1.5.7+dfsg-4), linux-libc-dev (= 7.2.11-1), m4 (= 1.4.21-1), make (= 4.4.1-3+b1), man-db (= 2.13.1-1+b1), matlab-support-dev (= 0.5), mawk (= 1.3.4.20260302-2), media-types (= 14.0.0), mesa-libgallium (= 26.2.5-1), ncurses-base (= 6.6+20260608-2), ncurses-bin (= 6.6+20260608-2), netbase (= 6.6), nettle-dev (= 3.10.2-1+b1), ocl-icd-libopencl1 (= 2.3.4-1+b1), octave (= 11.3.0-1+b1), octave-common (= 11.3.0-1), octave-dev (= 11.3.0-1+b1), openssl-provider-legacy (= 3.6.5-1), patch (= 2.8-2+b1), pci.ids (= 0.0~2026.09.23-1), perl (= 5.42.3-1), perl-base (= 5.42.3-1), perl-modules-5.42 (= 5.42.3-1), pkgconf (= 2.5.1-4), pkgconf-bin (= 2.5.1-4), po-debconf (= 1.0.22), procps (= 2:4.0.7-1), python3 (= 3.14.7-3), python3-minimal (= 3.14.7-3), python3.14 (= 3.14.8-1), python3.14-minimal (= 3.14.8-1), qt5-qmake (= 5.15.19+dfsg-5), qt5-qmake-bin (= 5.15.19+dfsg-5), qtbase5-dev (= 5.15.19+dfsg-5), qtbase5-dev-tools (= 5.15.19+dfsg-5), qtchooser (= 66-2+b2), readline-common (= 8.3-4), sed (= 4.9-3), sensible-utils (= 0.0.26), shared-mime-info (= 2.4-5+b4), systemd (= 262.1-1), sysvinit-utils (= 3.18-1), tar (= 1.35+dfsg-6), tex-common (= 6.21), texinfo (= 7.3-2), texinfo-lib (= 7.3-2+b1), tzdata (= 2026e-1), ucf (= 3.0056), util-linux (= 2.42.4-1), x11-common (= 1:7.7+26), x11proto-dev (= 2025.1-1), xkb-data (= 2.48-1), xorg-sgml-doctools (= 1:1.12.1-1), xtrans-dev (= 1.6.0-1), xz-utils (= 5.8.4-1), zlib1g (= 1:1.3.dfsg+really1.3.2-3), zlib1g-dev (= 1:1.3.dfsg+really1.3.2-3) Environment: DEB_BUILD_OPTIONS="parallel=8" LANG="C.UTF-8" LC_COLLATE="C.UTF-8" LC_CTYPE="C.UTF-8" SOURCE_DATE_EPOCH="1792624800" +------------------------------------------------------------------------------+ | Package contents Tue, 27 Oct 2026 08:50:40 +0000 | +------------------------------------------------------------------------------+ mrtrix3-dbgsym_3.0.8-4_arm64.deb -------------------------------- new Debian package, version 2.0. size 687280888 bytes: control archive=5472 bytes. 4965 bytes, 12 lines control 11978 bytes, 113 lines md5sums Package: mrtrix3-dbgsym Source: mrtrix3 Version: 3.0.8-4 Auto-Built-Package: debug-symbols Architecture: arm64 Maintainer: Debian Med Packaging Team Installed-Size: 745381 Depends: mrtrix3 (= 3.0.8-4) Section: debug Priority: optional Description: debug symbols for mrtrix3 Build-Ids: 01aa3a2dfc2a23e893fd12d67c5dacc3bb58d05f 01f98e3a950e60b867d78bf9065bf3c8e4f6ee01 0249d2a4e52727be4d0fb3f1048926774e883d55 03d4073ebb96092804e7659ead9c4d1a3a02c7e3 04c472a58589880f022a3b19cf1b3e6854ac5089 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1:1.1.4) Recommends: python3-numpy Suggests: matlab-support, mrtrix3-doc, octave Conflicts: mrtrix Section: science Priority: optional Homepage: https://www.mrtrix.org Description: diffusion-weighted MRI white matter tractography Set of tools to perform diffusion-weighted MRI white matter tractography of the brain in the presence of crossing fibres, using Constrained Spherical Deconvolution, and a probabilisitic streamlines algorithm. Magnetic resonance images in DICOM, ANALYZE, or uncompressed NIfTI format are supported. Commands: 5tt2gmwmi, 5tt2vis, 5ttcheck, 5ttedit, 5ttgen, afdconnectivity, amp2response, amp2sh, blend, connectome2tck, connectomeedit, connectomestats, convert_bruker, dcmedit, dcminfo, dirflip, dirgen, dirmerge, dirorder, dirstat, dwi2adc, dwi2fod, dwi2mask, dwi2response, dwi2tensor, dwibiascorrect, dwicat, dwidenoise, dwiextract, dwifslpreproc, dwigradcheck, dwinormalise, dwishellmath, fixel2peaks, fixel2sh, fixel2tsf, fixel2voxel, fixelcfestats, fixelconnectivity, fixelconvert, fixelcorrespondence, fixelcrop, fixelfilter, fixelreorient, fod2dec, fod2fixel, for_each, gen_scheme, label2colour, label2mesh, labelconvert, labelsgmfix, labelstats, maskdump, maskfilter, mesh2voxel, meshconvert, meshfilter, mraverageheader, mrcalc, mrcat, mrcentroid, mrcheckerboardmask, mrclusterstats, mrcolour, mrconvert, mrdegibbs, mrdump, mredit, mrfilter, mrgrid, mrhistmatch, mrhistogram, mrinfo, mrmath, mrmetric, mrregister, mrstats, mrthreshold, mrtransform, mrtrix3.py, mrtrix_cleanup, mrview, mtnormalise, notfound, peaks2amp, peaks2fixel, population_template, responsemean, sh2amp, sh2peaks, sh2power, sh2response, shbasis, shconv, shview, tck2connectome, tck2fixel, tckconvert, tckdfc, tckedit, tckgen, tckglobal, tckinfo, tckmap, tckresample, tcksample, tcksift, tcksift2, tckstats, tcktransform, tensor2metric, transformcalc, transformcompose, transformconvert, tsfdivide, tsfinfo, tsfmult, tsfsmooth, tsfthreshold, tsfvalidate, vectorstats, voxel2fixel, voxel2mesh, warp2metric, warpconvert, warpcorrect, warpinit, warpinvert drwxr-xr-x root/root 0 2026-10-21 23:20 ./ drwxr-xr-x root/root 0 2026-10-21 23:20 ./usr/ drwxr-xr-x root/root 0 2026-10-21 23:20 ./usr/bin/ lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/5tt2gmwmi -> ../lib/mrtrix3/bin/5tt2gmwmi lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/5tt2vis -> ../lib/mrtrix3/bin/5tt2vis lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/5ttcheck -> ../lib/mrtrix3/bin/5ttcheck lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/5ttedit -> ../lib/mrtrix3/bin/5ttedit lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/5ttgen -> ../lib/mrtrix3/bin/5ttgen lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/afdconnectivity -> ../lib/mrtrix3/bin/afdconnectivity lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/amp2response -> ../lib/mrtrix3/bin/amp2response lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/amp2sh -> ../lib/mrtrix3/bin/amp2sh lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/blend -> ../lib/mrtrix3/bin/blend lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/connectome2tck -> ../lib/mrtrix3/bin/connectome2tck lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/connectomeedit -> ../lib/mrtrix3/bin/connectomeedit lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/connectomestats -> ../lib/mrtrix3/bin/connectomestats lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/convert_bruker -> ../lib/mrtrix3/bin/convert_bruker lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/dcmedit -> ../lib/mrtrix3/bin/dcmedit lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/dcminfo -> ../lib/mrtrix3/bin/dcminfo lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/dirflip -> ../lib/mrtrix3/bin/dirflip lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/dirgen -> ../lib/mrtrix3/bin/dirgen lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/dirmerge -> ../lib/mrtrix3/bin/dirmerge lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/dirorder -> ../lib/mrtrix3/bin/dirorder lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/dirstat -> ../lib/mrtrix3/bin/dirstat lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/dwi2adc -> ../lib/mrtrix3/bin/dwi2adc lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/dwi2fod -> ../lib/mrtrix3/bin/dwi2fod lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/dwi2mask -> ../lib/mrtrix3/bin/dwi2mask lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/dwi2response -> ../lib/mrtrix3/bin/dwi2response lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/dwi2tensor -> ../lib/mrtrix3/bin/dwi2tensor lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/dwibiascorrect -> ../lib/mrtrix3/bin/dwibiascorrect lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/dwicat -> ../lib/mrtrix3/bin/dwicat lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/dwidenoise -> ../lib/mrtrix3/bin/dwidenoise lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/dwiextract -> ../lib/mrtrix3/bin/dwiextract lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/dwifslpreproc -> ../lib/mrtrix3/bin/dwifslpreproc lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/dwigradcheck -> ../lib/mrtrix3/bin/dwigradcheck lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/dwinormalise -> ../lib/mrtrix3/bin/dwinormalise lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/dwishellmath -> ../lib/mrtrix3/bin/dwishellmath lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/fixel2peaks -> ../lib/mrtrix3/bin/fixel2peaks lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/fixel2sh -> ../lib/mrtrix3/bin/fixel2sh lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/fixel2tsf -> ../lib/mrtrix3/bin/fixel2tsf lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/fixel2voxel -> ../lib/mrtrix3/bin/fixel2voxel lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/fixelcfestats -> ../lib/mrtrix3/bin/fixelcfestats lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/fixelconnectivity -> ../lib/mrtrix3/bin/fixelconnectivity lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/fixelconvert -> ../lib/mrtrix3/bin/fixelconvert lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/fixelcorrespondence -> ../lib/mrtrix3/bin/fixelcorrespondence lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/fixelcrop -> ../lib/mrtrix3/bin/fixelcrop lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/fixelfilter -> ../lib/mrtrix3/bin/fixelfilter lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/fixelreorient -> ../lib/mrtrix3/bin/fixelreorient lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/fod2dec -> ../lib/mrtrix3/bin/fod2dec lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/fod2fixel -> ../lib/mrtrix3/bin/fod2fixel lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/for_each -> ../lib/mrtrix3/bin/for_each lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/gen_scheme -> ../lib/mrtrix3/bin/gen_scheme lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/label2colour -> ../lib/mrtrix3/bin/label2colour lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/label2mesh -> ../lib/mrtrix3/bin/label2mesh lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/labelconvert -> ../lib/mrtrix3/bin/labelconvert lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/labelsgmfix -> ../lib/mrtrix3/bin/labelsgmfix lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/labelstats -> ../lib/mrtrix3/bin/labelstats lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/maskdump -> ../lib/mrtrix3/bin/maskdump lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/maskfilter -> ../lib/mrtrix3/bin/maskfilter lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/mesh2voxel -> ../lib/mrtrix3/bin/mesh2voxel lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/meshconvert -> ../lib/mrtrix3/bin/meshconvert lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/meshfilter -> ../lib/mrtrix3/bin/meshfilter lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/mraverageheader -> ../lib/mrtrix3/bin/mraverageheader lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/mrcalc -> ../lib/mrtrix3/bin/mrcalc lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/mrcat -> ../lib/mrtrix3/bin/mrcat lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/mrcentroid -> ../lib/mrtrix3/bin/mrcentroid lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/mrcheckerboardmask -> ../lib/mrtrix3/bin/mrcheckerboardmask lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/mrclusterstats -> ../lib/mrtrix3/bin/mrclusterstats lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/mrcolour -> ../lib/mrtrix3/bin/mrcolour lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/mrconvert -> ../lib/mrtrix3/bin/mrconvert lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/mrdegibbs -> ../lib/mrtrix3/bin/mrdegibbs lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/mrdump -> ../lib/mrtrix3/bin/mrdump lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/mredit -> ../lib/mrtrix3/bin/mredit lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/mrfilter -> ../lib/mrtrix3/bin/mrfilter lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/mrgrid -> ../lib/mrtrix3/bin/mrgrid lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/mrhistmatch -> ../lib/mrtrix3/bin/mrhistmatch lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/mrhistogram -> ../lib/mrtrix3/bin/mrhistogram lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/mrinfo -> ../lib/mrtrix3/bin/mrinfo lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/mrmath -> ../lib/mrtrix3/bin/mrmath lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/mrmetric -> ../lib/mrtrix3/bin/mrmetric lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/mrregister -> ../lib/mrtrix3/bin/mrregister lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/mrstats -> ../lib/mrtrix3/bin/mrstats lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/mrthreshold -> ../lib/mrtrix3/bin/mrthreshold lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/mrtransform -> ../lib/mrtrix3/bin/mrtransform lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/mrtrix3.py -> ../lib/mrtrix3/bin/mrtrix3.py lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/mrtrix_cleanup -> ../lib/mrtrix3/bin/mrtrix_cleanup lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/mrview -> ../lib/mrtrix3/bin/mrview lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/mtnormalise -> ../lib/mrtrix3/bin/mtnormalise lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/notfound -> ../lib/mrtrix3/bin/notfound lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/peaks2amp -> ../lib/mrtrix3/bin/peaks2amp lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/peaks2fixel -> ../lib/mrtrix3/bin/peaks2fixel lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/population_template -> ../lib/mrtrix3/bin/population_template lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/responsemean -> ../lib/mrtrix3/bin/responsemean lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/sh2amp -> ../lib/mrtrix3/bin/sh2amp lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/sh2peaks -> ../lib/mrtrix3/bin/sh2peaks lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/sh2power -> ../lib/mrtrix3/bin/sh2power lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/sh2response -> ../lib/mrtrix3/bin/sh2response lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/shbasis -> ../lib/mrtrix3/bin/shbasis lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/shconv -> ../lib/mrtrix3/bin/shconv lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/shview -> ../lib/mrtrix3/bin/shview lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/tck2connectome -> ../lib/mrtrix3/bin/tck2connectome lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/tck2fixel -> ../lib/mrtrix3/bin/tck2fixel lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/tckconvert -> ../lib/mrtrix3/bin/tckconvert lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/tckdfc -> ../lib/mrtrix3/bin/tckdfc lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/tckedit -> ../lib/mrtrix3/bin/tckedit lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/tckgen -> ../lib/mrtrix3/bin/tckgen lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/tckglobal -> ../lib/mrtrix3/bin/tckglobal lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/tckinfo -> ../lib/mrtrix3/bin/tckinfo lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/tckmap -> ../lib/mrtrix3/bin/tckmap lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/tckresample -> ../lib/mrtrix3/bin/tckresample lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/tcksample -> ../lib/mrtrix3/bin/tcksample lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/tcksift -> ../lib/mrtrix3/bin/tcksift lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/tcksift2 -> ../lib/mrtrix3/bin/tcksift2 lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/tckstats -> ../lib/mrtrix3/bin/tckstats lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/tcktransform -> ../lib/mrtrix3/bin/tcktransform lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/tensor2metric -> ../lib/mrtrix3/bin/tensor2metric lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/transformcalc -> ../lib/mrtrix3/bin/transformcalc lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/transformcompose -> ../lib/mrtrix3/bin/transformcompose lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/transformconvert -> ../lib/mrtrix3/bin/transformconvert lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/tsfdivide -> ../lib/mrtrix3/bin/tsfdivide lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/tsfinfo -> ../lib/mrtrix3/bin/tsfinfo lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/tsfmult -> ../lib/mrtrix3/bin/tsfmult lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/tsfsmooth -> ../lib/mrtrix3/bin/tsfsmooth lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/tsfthreshold -> ../lib/mrtrix3/bin/tsfthreshold lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/tsfvalidate -> ../lib/mrtrix3/bin/tsfvalidate lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/vectorstats -> ../lib/mrtrix3/bin/vectorstats lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/voxel2fixel -> ../lib/mrtrix3/bin/voxel2fixel lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/voxel2mesh -> ../lib/mrtrix3/bin/voxel2mesh lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/warp2metric -> ../lib/mrtrix3/bin/warp2metric lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/warpconvert -> ../lib/mrtrix3/bin/warpconvert lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/warpcorrect -> ../lib/mrtrix3/bin/warpcorrect lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/warpinit -> ../lib/mrtrix3/bin/warpinit lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/bin/warpinvert -> ../lib/mrtrix3/bin/warpinvert drwxr-xr-x root/root 0 2026-10-21 23:20 ./usr/lib/ drwxr-xr-x root/root 0 2026-10-21 23:20 ./usr/lib/mrtrix3/ drwxr-xr-x root/root 0 2026-10-21 23:20 ./usr/lib/mrtrix3/bin/ -rwxr-xr-x root/root 264584 2026-10-21 23:20 ./usr/lib/mrtrix3/bin/5tt2gmwmi -rwxr-xr-x root/root 264584 2026-10-21 23:20 ./usr/lib/mrtrix3/bin/5tt2vis -rwxr-xr-x root/root 264584 2026-10-21 23:20 ./usr/lib/mrtrix3/bin/5ttcheck -rwxr-xr-x root/root 264584 2026-10-21 23:20 ./usr/lib/mrtrix3/bin/5ttedit -rwxr-xr-x root/root 3734 2026-10-21 23:20 ./usr/lib/mrtrix3/bin/5ttgen -rwxr-xr-x root/root 1051232 2026-10-21 23:20 ./usr/lib/mrtrix3/bin/afdconnectivity -rwxr-xr-x root/root 330056 2026-10-21 23:20 ./usr/lib/mrtrix3/bin/amp2response -rwxr-xr-x root/root 395600 2026-10-21 23:20 ./usr/lib/mrtrix3/bin/amp2sh -rwxr-xr-x root/root 2400 2026-10-21 23:20 ./usr/lib/mrtrix3/bin/blend -rwxr-xr-x root/root 592344 2026-10-21 23:20 ./usr/lib/mrtrix3/bin/connectome2tck -rwxr-xr-x root/root 199032 2026-10-21 23:20 ./usr/lib/mrtrix3/bin/connectomeedit -rwxr-xr-x root/root 330088 2026-10-21 23:20 ./usr/lib/mrtrix3/bin/connectomestats -rwxr-xr-x root/root 4467 2026-10-21 23:20 ./usr/lib/mrtrix3/bin/convert_bruker -rwxr-xr-x root/root 67896 2026-10-21 23:20 ./usr/lib/mrtrix3/bin/dcmedit -rwxr-xr-x root/root 67896 2026-10-21 23:20 ./usr/lib/mrtrix3/bin/dcminfo -rwxr-xr-x root/root 133448 2026-10-21 23:20 ./usr/lib/mrtrix3/bin/dirflip -rwxr-xr-x root/root 199016 2026-10-21 23:20 ./usr/lib/mrtrix3/bin/dirgen -rwxr-xr-x root/root 133432 2026-10-21 23:20 ./usr/lib/mrtrix3/bin/dirmerge -rwxr-xr-x root/root 198968 2026-10-21 23:20 ./usr/lib/mrtrix3/bin/dirorder -rwxr-xr-x root/root 133448 2026-10-21 23:20 ./usr/lib/mrtrix3/bin/dirsplit -rwxr-xr-x root/root 198976 2026-10-21 23:20 ./usr/lib/mrtrix3/bin/dirstat -rwxr-xr-x root/root 198992 2026-10-21 23:20 ./usr/lib/mrtrix3/bin/dwi2adc -rwxr-xr-x root/root 592208 2026-10-21 23:20 ./usr/lib/mrtrix3/bin/dwi2fod -rwxr-xr-x root/root 395592 2026-10-21 23:20 ./usr/lib/mrtrix3/bin/dwi2mask -rwxr-xr-x root/root 6403 2026-10-21 23:20 ./usr/lib/mrtrix3/bin/dwi2response -rwxr-xr-x 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./usr/share/man/man1/transformcompose.1.gz -> mrtrix3.1.gz lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/share/man/man1/transformconvert.1.gz -> mrtrix3.1.gz lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/share/man/man1/tsfdivide.1.gz -> mrtrix3.1.gz lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/share/man/man1/tsfinfo.1.gz -> mrtrix3.1.gz lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/share/man/man1/tsfmult.1.gz -> mrtrix3.1.gz lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/share/man/man1/tsfsmooth.1.gz -> mrtrix3.1.gz lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/share/man/man1/tsfthreshold.1.gz -> mrtrix3.1.gz lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/share/man/man1/tsfvalidate.1.gz -> mrtrix3.1.gz lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/share/man/man1/vectorstats.1.gz -> mrtrix3.1.gz lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/share/man/man1/voxel2fixel.1.gz -> mrtrix3.1.gz lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/share/man/man1/voxel2mesh.1.gz -> mrtrix3.1.gz lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/share/man/man1/warp2metric.1.gz -> mrtrix3.1.gz lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/share/man/man1/warpconvert.1.gz -> mrtrix3.1.gz lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/share/man/man1/warpcorrect.1.gz -> mrtrix3.1.gz lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/share/man/man1/warpinit.1.gz -> mrtrix3.1.gz lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/share/man/man1/warpinvert.1.gz -> mrtrix3.1.gz drwxr-xr-x root/root 0 2026-10-21 23:20 ./usr/share/matlab/ drwxr-xr-x root/root 0 2026-10-21 23:20 ./usr/share/matlab/site/ drwxr-xr-x root/root 0 2026-10-21 23:20 ./usr/share/matlab/site/m/ lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/share/matlab/site/m/mrtrix -> ../../../mrtrix3/matlab drwxr-xr-x root/root 0 2026-10-21 23:20 ./usr/share/mrtrix3/ drwxr-xr-x root/root 0 2025-10-21 18:03 ./usr/share/mrtrix3/matlab/ drwxr-xr-x root/root 0 2025-10-21 18:03 ./usr/share/mrtrix3/matlab/private/ -rw-r--r-- root/root 1002 2025-10-21 18:03 ./usr/share/mrtrix3/matlab/private/add_field.m -rw-r--r-- root/root 3499 2025-10-21 18:03 ./usr/share/mrtrix3/matlab/read_mrtrix.m -rw-r--r-- root/root 2689 2025-10-21 18:03 ./usr/share/mrtrix3/matlab/read_mrtrix_tracks.m -rw-r--r-- root/root 2579 2025-10-21 18:03 ./usr/share/mrtrix3/matlab/read_mrtrix_tsf.m -rw-r--r-- root/root 5065 2025-10-21 18:03 ./usr/share/mrtrix3/matlab/write_mrtrix.m -rw-r--r-- root/root 2090 2025-10-21 18:03 ./usr/share/mrtrix3/matlab/write_mrtrix_tracks.m -rw-r--r-- root/root 2070 2025-10-21 18:03 ./usr/share/mrtrix3/matlab/write_mrtrix_tsf.m drwxr-xr-x root/root 0 2026-10-21 23:20 ./usr/share/octave/ drwxr-xr-x root/root 0 2026-10-21 23:20 ./usr/share/octave/site/ drwxr-xr-x root/root 0 2026-10-21 23:20 ./usr/share/octave/site/m/ lrwxrwxrwx root/root 0 2026-10-21 23:20 ./usr/share/octave/site/m/mrtrix -> ../../../mrtrix3/matlab drwxr-xr-x root/root 0 2026-10-21 23:20 ./usr/share/pixmaps/ -rw-r--r-- root/root 9782 2026-10-21 23:20 ./usr/share/pixmaps/mrtrix.png +------------------------------------------------------------------------------+ | Post Build Tue, 27 Oct 2026 08:50:46 +0000 | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup Tue, 27 Oct 2026 08:50:46 +0000 | +------------------------------------------------------------------------------+ Purging /build/reproducible-path Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary Tue, 27 Oct 2026 08:50:50 +0000 | +------------------------------------------------------------------------------+ Build Architecture: arm64 Build Type: any Build-Space: 8028236 Build-Time: 1572 Distribution: unstable Host Architecture: arm64 Install-Time: 4 Job: /srv/rebuilderd/tmp/rebuilderdANrAbN/inputs/mrtrix3_3.0.8-4.dsc Machine Architecture: arm64 Package: mrtrix3 Package-Time: 1590 Source-Version: 3.0.8-4 Space: 8028236 Status: successful Version: 3.0.8-4 -------------------------------------------------------------------------------- Finished at 2026-10-27T08:50:39Z Build needed 00:26:30, 8028236k disk space build artifacts stored in /srv/rebuilderd/tmp/rebuilderdANrAbN/out checking mrtrix3-dbgsym_3.0.8-4_arm64.deb: size differs for mrtrix3-dbgsym_3.0.8-4_arm64.deb