=============================================================================== About this build: this rebuild has been done as part of reproduce.debian.net where we aim to reproduce Debian binary packages distributed via ftp.debian.org, by rebuilding using the exact same packages as the original build on the buildds, as described in the relevant .buildinfo file from buildinfos.debian.net. For more information please go to https://reproduce.debian.net or join #debian-reproducible on irc.debian.org =============================================================================== Preparing download of sources for /srv/rebuilderd/tmp/rebuilderdFiyda4/inputs/mapsembler2_2.2.4+dfsg1-5_arm64.buildinfo Source: mapsembler2 Version: 2.2.4+dfsg1-5 rebuilderd-worker node: codethink02-arm64 +------------------------------------------------------------------------------+ | Downloading sources Sat, 29 Nov 2025 11:19:16 +0000 | +------------------------------------------------------------------------------+ Get:1 https://deb.debian.org/debian trixie InRelease [140 kB] Get:2 https://deb.debian.org/debian-security trixie-security InRelease [43.4 kB] Get:3 https://deb.debian.org/debian trixie-updates InRelease [47.3 kB] Get:4 https://deb.debian.org/debian trixie-proposed-updates InRelease [57.5 kB] Get:5 https://deb.debian.org/debian trixie-backports InRelease [54.0 kB] Get:6 https://deb.debian.org/debian forky InRelease [148 kB] Get:7 https://deb.debian.org/debian sid InRelease [176 kB] Get:8 https://deb.debian.org/debian experimental InRelease [82.8 kB] Get:9 https://deb.debian.org/debian trixie/non-free-firmware Sources [6548 B] Get:10 https://deb.debian.org/debian trixie/main Sources [10.5 MB] Get:11 https://deb.debian.org/debian-security trixie-security/non-free-firmware Sources [696 B] Get:12 https://deb.debian.org/debian-security trixie-security/main Sources [95.1 kB] Get:13 https://deb.debian.org/debian trixie-updates/main Sources [2788 B] Get:14 https://deb.debian.org/debian trixie-proposed-updates/main Sources [35.8 kB] Get:15 https://deb.debian.org/debian trixie-backports/non-free-firmware Sources [1032 B] Get:16 https://deb.debian.org/debian trixie-backports/main Sources [104 kB] Get:17 https://deb.debian.org/debian forky/non-free-firmware Sources [7408 B] Get:18 https://deb.debian.org/debian forky/main Sources [10.7 MB] Get:19 https://deb.debian.org/debian sid/main Sources [11.2 MB] Get:20 https://deb.debian.org/debian sid/non-free-firmware Sources [9684 B] Get:21 https://deb.debian.org/debian experimental/non-free-firmware Sources [3052 B] Get:22 https://deb.debian.org/debian experimental/main Sources [365 kB] Fetched 33.8 MB in 31s (1099 kB/s) Reading package lists... 'https://deb.debian.org/debian/pool/main/m/mapsembler2/mapsembler2_2.2.4%2bdfsg1-5.dsc' mapsembler2_2.2.4+dfsg1-5.dsc 2263 SHA256:94e2ef3543e8a8848880d6360c5ea9c7ac841d00f379789a9ab7f1c1be3540ff 'https://deb.debian.org/debian/pool/main/m/mapsembler2/mapsembler2_2.2.4%2bdfsg1.orig.tar.xz' mapsembler2_2.2.4+dfsg1.orig.tar.xz 1369588 SHA256:44b215f922ed34c3a167eb512012792e7d777df17d3dda6a2c4a5a0959e8b824 'https://deb.debian.org/debian/pool/main/m/mapsembler2/mapsembler2_2.2.4%2bdfsg1-5.debian.tar.xz' mapsembler2_2.2.4+dfsg1-5.debian.tar.xz 24464 SHA256:c95261bce826d6105f291638779f3b41ae7e934ff684390dcc49fd58cea343be 44b215f922ed34c3a167eb512012792e7d777df17d3dda6a2c4a5a0959e8b824 mapsembler2_2.2.4+dfsg1.orig.tar.xz c95261bce826d6105f291638779f3b41ae7e934ff684390dcc49fd58cea343be mapsembler2_2.2.4+dfsg1-5.debian.tar.xz 94e2ef3543e8a8848880d6360c5ea9c7ac841d00f379789a9ab7f1c1be3540ff mapsembler2_2.2.4+dfsg1-5.dsc +------------------------------------------------------------------------------+ | Calling debrebuild Sat, 29 Nov 2025 11:19:48 +0000 | +------------------------------------------------------------------------------+ Rebuilding mapsembler2=2.2.4+dfsg1-5 in /srv/rebuilderd/tmp/rebuilderdFiyda4/inputs now. + nice /usr/bin/debrebuild --buildresult=/srv/rebuilderd/tmp/rebuilderdFiyda4/out --builder=sbuild+unshare --cache=/srv/rebuilderd/cache -- /srv/rebuilderd/tmp/rebuilderdFiyda4/inputs/mapsembler2_2.2.4+dfsg1-5_arm64.buildinfo /srv/rebuilderd/tmp/rebuilderdFiyda4/inputs/mapsembler2_2.2.4+dfsg1-5_arm64.buildinfo contains a GPG signature which has NOT been validated Using defined Build-Path: /build/reproducible-path/mapsembler2-2.2.4+dfsg1 I: verifying dsc... successful! Get:1 http://deb.debian.org/debian unstable InRelease [176 kB] Get:2 http://snapshot.debian.org/archive/debian/20251017T144549Z sid InRelease [207 kB] Get:3 http://deb.debian.org/debian unstable/main arm64 Packages [10.2 MB] Get:4 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 Packages [10.1 MB] Fetched 20.7 MB in 2s (10.7 MB/s) Reading package lists... W: http://snapshot.debian.org/archive/debian/20251017T144549Z/dists/sid/InRelease: Loading /etc/apt/trusted.gpg from deprecated option Dir::Etc::Trusted Get:1 http://deb.debian.org/debian unstable/main arm64 libsmartcols1 arm64 2.41.2-4 [139 kB] Fetched 139 kB in 0s (13.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn30re4yt/libsmartcols1_2.41.2-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libarchive13t64 arm64 3.7.4-4+b1 [323 kB] Fetched 323 kB in 0s (32.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6xnq5q9r/libarchive13t64_3.7.4-4+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 zlib1g arm64 1:1.3.dfsg+really1.3.1-1+b1 [85.1 kB] Fetched 85.1 kB in 0s (0 B/s) dpkg-name: info: moved 'zlib1g_1%3a1.3.dfsg+really1.3.1-1+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmprlkjnfye/zlib1g_1.3.dfsg+really1.3.1-1+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 libgssrpc4t64 arm64 1.21.3-5 [57.2 kB] Fetched 57.2 kB in 0s (4483 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdok7w_sj/libgssrpc4t64_1.21.3-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libhdf5-dev arm64 1.14.5+repack-4 [3219 kB] Fetched 3219 kB in 0s (70.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpg_2j5m8p/libhdf5-dev_1.14.5+repack-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 debhelper all 13.28 [941 kB] Fetched 941 kB in 0s (75.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphe87b6fi/debhelper_13.28_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 bc arm64 1.07.1-4+b1 [101 kB] Fetched 101 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxm01o5ky/bc_1.07.1-4+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 librhash1 arm64 1.4.6-1 [131 kB] Fetched 131 kB in 0s (11.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpszsuc3tj/librhash1_1.4.6-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 librtmp-dev arm64 2.4+20151223.gitfa8646d.1-3 [173 kB] Fetched 173 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpas5hrh9k/librtmp-dev_2.4+20151223.gitfa8646d.1-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libngtcp2-crypto-ossl-dev arm64 1.16.0-1 [27.6 kB] Fetched 27.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj8x26m09/libngtcp2-crypto-ossl-dev_1.16.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 pkgconf-bin arm64 1.8.1-4 [29.6 kB] Fetched 29.6 kB in 0s (1606 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0nsjimbl/pkgconf-bin_1.8.1-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libjpeg62-turbo arm64 1:2.1.5-4 [173 kB] Fetched 173 kB in 0s (3926 kB/s) dpkg-name: info: moved 'libjpeg62-turbo_1%3a2.1.5-4_arm64.deb' to '/srv/rebuilderd/tmp/tmp7cumk1t1/libjpeg62-turbo_2.1.5-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libidn2-dev arm64 2.3.8-4 [102 kB] Fetched 102 kB in 0s (7261 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp333e6_iz/libidn2-dev_2.3.8-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpkgconf3 arm64 1.8.1-4 [35.3 kB] Fetched 35.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqs9z3x3z/libpkgconf3_1.8.1-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 cpp arm64 4:15.2.0-4 [1568 B] Fetched 1568 B in 0s (98.0 kB/s) dpkg-name: info: moved 'cpp_4%3a15.2.0-4_arm64.deb' to '/srv/rebuilderd/tmp/tmpo9a1gaum/cpp_15.2.0-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 libsframe2 arm64 2.45-7 [80.0 kB] Fetched 80.0 kB in 0s (5811 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps6mkpjsr/libsframe2_2.45-7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 xz-utils arm64 5.8.1-2 [657 kB] Fetched 657 kB in 0s (27.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuoi0_laj/xz-utils_5.8.1-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxxhash0 arm64 0.8.3-2 [22.3 kB] Fetched 22.3 kB in 0s (1910 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdhxdhogw/libxxhash0_0.8.3-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 libgnutls28-dev arm64 3.8.10-2 [1438 kB] Fetched 1438 kB in 0s (100 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp17s4vj3e/libgnutls28-dev_3.8.10-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 ncurses-bin arm64 6.5+20250216-2 [432 kB] Fetched 432 kB in 0s (21.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1s_zmitl/ncurses-bin_6.5+20250216-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 dh-autoreconf all 21 [12.2 kB] Fetched 12.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbarpb4r5/dh-autoreconf_21_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 readline-common all 8.3-3 [74.8 kB] Fetched 74.8 kB in 0s (6675 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplsgapqjh/readline-common_8.3-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libmpc3 arm64 1.3.1-2 [50.2 kB] Fetched 50.2 kB in 0s (4334 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz8yygdgu/libmpc3_1.3.1-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 base-passwd arm64 3.6.7 [53.4 kB] Fetched 53.4 kB in 0s (3022 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpepj_zyrp/base-passwd_3.6.7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libdpkg-perl all 1.22.21 [650 kB] Fetched 650 kB in 0s (47.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5icbxwui/libdpkg-perl_1.22.21_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 libsystemd0 arm64 258.1-1 [427 kB] Fetched 427 kB in 0s (36.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyx_7tmae/libsystemd0_258.1-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 automake all 1:1.18.1-2 [877 kB] Fetched 877 kB in 0s (62.6 MB/s) dpkg-name: info: moved 'automake_1%3a1.18.1-2_all.deb' to '/srv/rebuilderd/tmp/tmpkdbtw7ye/automake_1.18.1-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libjpeg62-turbo-dev arm64 1:2.1.5-4 [293 kB] Fetched 293 kB in 0s (11.0 MB/s) dpkg-name: info: moved 'libjpeg62-turbo-dev_1%3a2.1.5-4_arm64.deb' to '/srv/rebuilderd/tmp/tmpupvvtkj5/libjpeg62-turbo-dev_2.1.5-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libreadline8t64 arm64 8.3-3 [169 kB] Fetched 169 kB in 0s (15.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgdkmdorj/libreadline8t64_8.3-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libnghttp2-14 arm64 1.64.0-1.1+b1 [71.7 kB] Fetched 71.7 kB in 0s (5222 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz3hgzta8/libnghttp2-14_1.64.0-1.1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libc-dev-bin arm64 2.41-12 [57.4 kB] Fetched 57.4 kB in 0s (5260 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn1xqdfx3/libc-dev-bin_2.41-12_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 g++ arm64 4:15.2.0-4 [1332 B] Fetched 1332 B in 0s (114 kB/s) dpkg-name: info: moved 'g++_4%3a15.2.0-4_arm64.deb' to '/srv/rebuilderd/tmp/tmpp2ououb8/g++_15.2.0-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgmpxx4ldbl arm64 2:6.3.0+dfsg-5 [329 kB] Fetched 329 kB in 0s (0 B/s) dpkg-name: info: moved 'libgmpxx4ldbl_2%3a6.3.0+dfsg-5_arm64.deb' to '/srv/rebuilderd/tmp/tmpoud0f_y8/libgmpxx4ldbl_6.3.0+dfsg-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 groff-base arm64 1.23.0-9 [1130 kB] Fetched 1130 kB in 0s (63.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp49grsc9w/groff-base_1.23.0-9_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 cmake-data all 4.1.1+really3.31.6-2 [2268 kB] Fetched 2268 kB in 0s (126 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7rsn_i6n/cmake-data_4.1.1+really3.31.6-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 libjsoncpp26 arm64 1.9.6-4 [73.2 kB] Fetched 73.2 kB in 0s (4197 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp71v229ox/libjsoncpp26_1.9.6-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libcap2 arm64 1:2.75-10+b1 [28.2 kB] Fetched 28.2 kB in 0s (1837 kB/s) dpkg-name: info: moved 'libcap2_1%3a2.75-10+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmp9h5heflj/libcap2_2.75-10+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 build-essential arm64 12.12 [4624 B] Fetched 4624 B in 0s (430 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptlzxyw_e/build-essential_12.12_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 libkadm5srv-mit12 arm64 1.21.3-5 [53.0 kB] Fetched 53.0 kB in 0s (5087 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpej37wkqi/libkadm5srv-mit12_1.21.3-5_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 libkrb5-dev arm64 1.21.3-5 [16.1 kB] Fetched 16.1 kB in 0s (1071 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_gd830d3/libkrb5-dev_1.21.3-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libngtcp2-crypto-ossl0 arm64 1.16.0-1 [25.7 kB] Fetched 25.7 kB in 0s (1883 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppdvtn2un/libngtcp2-crypto-ossl0_1.16.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgmp-dev arm64 2:6.3.0+dfsg-5 [621 kB] Fetched 621 kB in 0s (45.4 MB/s) dpkg-name: info: moved 'libgmp-dev_2%3a6.3.0+dfsg-5_arm64.deb' to '/srv/rebuilderd/tmp/tmp0zpcycc0/libgmp-dev_6.3.0+dfsg-5_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 libkrb5-3 arm64 1.21.3-5 [308 kB] Fetched 308 kB in 0s (30.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxx6yi73d/libkrb5-3_1.21.3-5_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 libcrypt1 arm64 1:4.4.38-1 [91.8 kB] Fetched 91.8 kB in 0s (7424 kB/s) dpkg-name: info: moved 'libcrypt1_1%3a4.4.38-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpvyxzdmvu/libcrypt1_4.4.38-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libssl3t64 arm64 3.5.4-1 [2725 kB] Fetched 2725 kB in 0s (107 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxs4tj08n/libssl3t64_3.5.4-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 cpp-15 arm64 15.2.0-4 [1276 B] Fetched 1276 B in 0s (71.8 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp83sdzbry/cpp-15_15.2.0-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 libcurl4-openssl-dev arm64 8.16.0-4 [505 kB] Fetched 505 kB in 0s (24.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpep43uvqn/libcurl4-openssl-dev_8.16.0-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 diffutils arm64 1:3.10-4 [378 kB] Fetched 378 kB in 0s (21.2 MB/s) dpkg-name: info: moved 'diffutils_1%3a3.10-4_arm64.deb' to '/srv/rebuilderd/tmp/tmpuo0g1kg7/diffutils_3.10-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 comerr-dev arm64 2.1-1.47.2-3+b3 [56.9 kB] Fetched 56.9 kB in 0s (3293 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxv3b7q0i/comerr-dev_2.1-1.47.2-3+b3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libmpfr6 arm64 4.2.2-2 [685 kB] Fetched 685 kB in 0s (30.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwvt87t8f/libmpfr6_4.2.2-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 libstdc++-15-dev arm64 15.2.0-4 [2323 kB] Fetched 2323 kB in 0s (63.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjviz6cc8/libstdc++-15-dev_15.2.0-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libzstd1 arm64 1.5.7+dfsg-2 [260 kB] Fetched 260 kB in 0s (12.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb6aa24_1/libzstd1_1.5.7+dfsg-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 pkgconf arm64 1.8.1-4 [26.1 kB] Fetched 26.1 kB in 0s (1493 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpplm47pce/pkgconf_1.8.1-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 liblz4-1 arm64 1.10.0-4 [60.0 kB] Fetched 60.0 kB in 0s (2085 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpszskr46w/liblz4-1_1.10.0-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libdb5.3t64 arm64 5.3.28+dfsg2-10 [626 kB] Fetched 626 kB in 0s (29.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpg4tdk70x/libdb5.3t64_5.3.28+dfsg2-10_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libc-bin arm64 2.41-12 [551 kB] Fetched 551 kB in 0s (40.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqopu9eqi/libc-bin_2.41-12_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 cpp-aarch64-linux-gnu arm64 4:15.2.0-4 [5288 B] Fetched 5288 B in 0s (309 kB/s) dpkg-name: info: moved 'cpp-aarch64-linux-gnu_4%3a15.2.0-4_arm64.deb' to '/srv/rebuilderd/tmp/tmptvqfuaxv/cpp-aarch64-linux-gnu_15.2.0-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libmagic-mgc arm64 1:5.46-5 [338 kB] Fetched 338 kB in 0s (17.9 MB/s) dpkg-name: info: moved 'libmagic-mgc_1%3a5.46-5_arm64.deb' to '/srv/rebuilderd/tmp/tmpuesid085/libmagic-mgc_5.46-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libldap-dev arm64 2.6.10+dfsg-1 [305 kB] Fetched 305 kB in 0s (15.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp06tffhta/libldap-dev_2.6.10+dfsg-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libhdf5-hl-cpp-310 arm64 1.14.5+repack-4 [24.9 kB] Fetched 24.9 kB in 0s (976 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgbv3zmf9/libhdf5-hl-cpp-310_1.14.5+repack-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libngtcp2-dev arm64 1.16.0-1 [183 kB] Fetched 183 kB in 0s (9401 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1rns1dda/libngtcp2-dev_1.16.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libaudit-common all 1:4.1.2-1 [14.3 kB] Fetched 14.3 kB in 0s (751 kB/s) dpkg-name: info: moved 'libaudit-common_1%3a4.1.2-1_all.deb' to '/srv/rebuilderd/tmp/tmp92_6kek1/libaudit-common_4.1.2-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libhdf5-cpp-310 arm64 1.14.5+repack-4 [129 kB] Fetched 129 kB in 0s (7072 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgxj32l67/libhdf5-cpp-310_1.14.5+repack-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libuuid1 arm64 2.41.2-4 [37.8 kB] Fetched 37.8 kB in 0s (2231 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp31bu9nmu/libuuid1_2.41.2-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 ncurses-base all 6.5+20250216-2 [273 kB] Fetched 273 kB in 0s (14.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzjh_b54h/ncurses-base_6.5+20250216-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 libubsan1 arm64 15.2.0-4 [1064 kB] Fetched 1064 kB in 0s (40.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpalolqy9f/libubsan1_15.2.0-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 gettext-base arm64 0.23.1-2+b1 [241 kB] Fetched 241 kB in 0s (12.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz1awvc3t/gettext-base_0.23.1-2+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 krb5-multidev arm64 1.21.3-5 [126 kB] Fetched 126 kB in 0s (7260 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkwwr12pw/krb5-multidev_1.21.3-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 coreutils arm64 9.7-3 [2949 kB] Fetched 2949 kB in 0s (72.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx7ps00s_/coreutils_9.7-3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 libkdb5-10t64 arm64 1.21.3-5 [41.3 kB] Fetched 41.3 kB in 0s (2382 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplx2vrq3g/libkdb5-10t64_1.21.3-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libssl-dev arm64 3.5.4-1 [3377 kB] Fetched 3377 kB in 0s (56.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0xjyt42c/libssl-dev_3.5.4-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libnettle8t64 arm64 3.10.2-1 [305 kB] Fetched 305 kB in 0s (15.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_yuyqzrl/libnettle8t64_3.10.2-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpam-runtime all 1.7.0-5 [249 kB] Fetched 249 kB in 0s (13.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptznh75is/libpam-runtime_1.7.0-5_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 bzip2 arm64 1.0.8-6 [39.5 kB] Fetched 39.5 kB in 0s (2156 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpad0633hh/bzip2_1.0.8-6_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpcre2-8-0 arm64 10.46-1 [262 kB] Fetched 262 kB in 0s (14.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3ufuw2m6/libpcre2-8-0_10.46-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 dpkg-dev all 1.22.21 [1338 kB] Fetched 1338 kB in 0s (29.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4yamou0e/dpkg-dev_1.22.21_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 libunbound8 arm64 1.24.0-2 [559 kB] Fetched 559 kB in 0s (25.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdk94v0dz/libunbound8_1.24.0-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libc6-dev arm64 2.41-12 [1621 kB] Fetched 1621 kB in 0s (53.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpckqzggmo/libc6-dev_2.41-12_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 gcc-aarch64-linux-gnu arm64 4:15.2.0-4 [1432 B] Fetched 1432 B in 0s (73.9 kB/s) dpkg-name: info: moved 'gcc-aarch64-linux-gnu_4%3a15.2.0-4_arm64.deb' to '/srv/rebuilderd/tmp/tmpowgtqssx/gcc-aarch64-linux-gnu_15.2.0-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libdebhelper-perl all 13.28 [92.4 kB] Fetched 92.4 kB in 0s (5262 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpycg_o4_9/libdebhelper-perl_13.28_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libseccomp2 arm64 2.6.0-2 [51.0 kB] Fetched 51.0 kB in 0s (2503 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8c7s54j9/libseccomp2_2.6.0-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 init-system-helpers all 1.69 [39.3 kB] Fetched 39.3 kB in 0s (2229 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_i6gy2yk/init-system-helpers_1.69_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 sensible-utils all 0.0.26 [27.0 kB] Fetched 27.0 kB in 0s (1557 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2t7kfrey/sensible-utils_0.0.26_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libhdf5-310 arm64 1.14.5+repack-4 [1177 kB] Fetched 1177 kB in 0s (43.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2yv54d4t/libhdf5-310_1.14.5+repack-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 sysvinit-utils arm64 3.14-4 [34.0 kB] Fetched 34.0 kB in 0s (2016 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmparsfb07i/sysvinit-utils_3.14-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libmd0 arm64 1.1.0-2+b1 [33.7 kB] Fetched 33.7 kB in 0s (1838 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfj7_u2__/libmd0_1.1.0-2+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 libtinfo6 arm64 6.5+20250216-2 [341 kB] Fetched 341 kB in 0s (17.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjp1sqchk/libtinfo6_6.5+20250216-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libnghttp3-9 arm64 1.12.0-1 [63.6 kB] Fetched 63.6 kB in 0s (3619 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy61kt12_/libnghttp3-9_1.12.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libssh2-1t64 arm64 1.11.1-1 [235 kB] Fetched 235 kB in 0s (11.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc0p1xhwg/libssh2-1t64_1.11.1-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 libtsan2 arm64 15.2.0-4 [2400 kB] Fetched 2400 kB in 0s (61.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpncaipcz8/libtsan2_15.2.0-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 hostname arm64 3.25 [10.8 kB] Fetched 10.8 kB in 0s (626 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc43qz_n1/hostname_3.25_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libcom-err2 arm64 1.47.2-3+b3 [24.9 kB] Fetched 24.9 kB in 0s (1472 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpahsc4zir/libcom-err2_1.47.2-3+b3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 g++-aarch64-linux-gnu arm64 4:15.2.0-4 [1196 B] Fetched 1196 B in 0s (73.5 kB/s) dpkg-name: info: moved 'g++-aarch64-linux-gnu_4%3a15.2.0-4_arm64.deb' to '/srv/rebuilderd/tmp/tmp_a24ilda/g++-aarch64-linux-gnu_15.2.0-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 libgcc-s1 arm64 15.2.0-4 [53.5 kB] Fetched 53.5 kB in 0s (3039 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0vqrfjko/libgcc-s1_15.2.0-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 gcc-15-aarch64-linux-gnu arm64 15.2.0-4 [81.8 MB] Fetched 81.8 MB in 0s (179 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpji6mvjt1/gcc-15-aarch64-linux-gnu_15.2.0-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 gcc-15-base arm64 15.2.0-4 [52.8 kB] Fetched 52.8 kB in 0s (3066 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppsfbaxpb/gcc-15-base_15.2.0-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libboost-dev arm64 1.83.0.2+b2 [3828 B] Fetched 3828 B in 0s (231 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpya7ompm7/libboost-dev_1.83.0.2+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 autotools-dev all 20240727.1 [60.2 kB] Fetched 60.2 kB in 0s (3288 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9c9lqqam/autotools-dev_20240727.1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 dash arm64 0.5.12-12 [95.6 kB] Fetched 95.6 kB in 0s (5392 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdwggu4wp/dash_0.5.12-12_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 gcc-15 arm64 15.2.0-4 [511 kB] Fetched 511 kB in 0s (22.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6wajtx_y/gcc-15_15.2.0-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libhdf5-hl-fortran-310 arm64 1.14.5+repack-4 [44.5 kB] Fetched 44.5 kB in 0s (2601 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_zs8bh19/libhdf5-hl-fortran-310_1.14.5+repack-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpsl-dev arm64 0.21.2-1.1+b1 [77.9 kB] Fetched 77.9 kB in 0s (4453 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0phmi9bl/libpsl-dev_0.21.2-1.1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 mawk arm64 1.3.4.20250131-1 [134 kB] Fetched 134 kB in 0s (7232 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpiwh43ulm/mawk_1.3.4.20250131-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 dpkg arm64 1.22.21 [1521 kB] Fetched 1521 kB in 0s (50.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy9gcenpr/dpkg_1.22.21_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 gettext arm64 0.23.1-2+b1 [1612 kB] Fetched 1612 kB in 0s (81.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1k5x_a8_/gettext_0.23.1-2+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 cmake arm64 4.1.1+really3.31.6-2 [10.1 MB] Fetched 10.1 MB in 0s (103 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppucb6m4z/cmake_4.1.1+really3.31.6-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 libatomic1 arm64 15.2.0-4 [9940 B] Fetched 9940 B in 0s (560 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpq0nhhz76/libatomic1_15.2.0-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 libgcc-15-dev arm64 15.2.0-4 [2373 kB] Fetched 2373 kB in 0s (59.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp19e5bgiq/libgcc-15-dev_15.2.0-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 hdf5-helpers arm64 1.14.5+repack-4 [26.7 kB] Fetched 26.7 kB in 0s (1473 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0xfivp0v/hdf5-helpers_1.14.5+repack-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libbrotli1 arm64 1.1.0-2+b7 [308 kB] Fetched 308 kB in 0s (15.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyau0xztl/libbrotli1_1.1.0-2+b7_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 linux-libc-dev all 6.16.12-1 [2547 kB] Fetched 2547 kB in 0s (67.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgqhphhrg/linux-libc-dev_6.16.12-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpam-modules arm64 1.7.0-5 [172 kB] Fetched 172 kB in 0s (9376 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy50m_hck/libpam-modules_1.7.0-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libcap-ng0 arm64 0.8.5-4+b1 [17.0 kB] Fetched 17.0 kB in 0s (989 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu2tga9qa/libcap-ng0_0.8.5-4+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgmp10 arm64 2:6.3.0+dfsg-5 [535 kB] Fetched 535 kB in 0s (25.3 MB/s) dpkg-name: info: moved 'libgmp10_2%3a6.3.0+dfsg-5_arm64.deb' to '/srv/rebuilderd/tmp/tmpp5gta1ra/libgmp10_6.3.0+dfsg-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libcppunit-dev arm64 1.15.1-4+b2 [202 kB] Fetched 202 kB in 0s (10.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpe2cl9iyq/libcppunit-dev_1.15.1-4+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libhdf5-fortran-310 arm64 1.14.5+repack-4 [114 kB] Fetched 114 kB in 0s (6594 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_l2nvxd5/libhdf5-fortran-310_1.14.5+repack-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 bsdextrautils arm64 2.41.2-4 [97.3 kB] Fetched 97.3 kB in 0s (5061 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7brbc8oz/bsdextrautils_2.41.2-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 libcrypt-dev arm64 1:4.4.38-1 [123 kB] Fetched 123 kB in 0s (7234 kB/s) dpkg-name: info: moved 'libcrypt-dev_1%3a4.4.38-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpbuw56xrh/libcrypt-dev_4.4.38-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 bash arm64 5.3-1 [1507 kB] Fetched 1507 kB in 0s (51.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoa_pv085/bash_5.3-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 autoconf all 2.72-3.1 [494 kB] Fetched 494 kB in 0s (35.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdccvqku4/autoconf_2.72-3.1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libtasn1-6 arm64 4.20.0-2 [47.3 kB] Fetched 47.3 kB in 0s (2626 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpafsduaaa/libtasn1-6_4.20.0-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 libudev1 arm64 258.1-1 [147 kB] Fetched 147 kB in 0s (7868 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_i26k9d7/libudev1_258.1-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Fetched 104 kB in 0s (5742 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpshpvresp/libarchive-zip-perl_1.68-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgdbm6t64 arm64 1.26-1 [77.5 kB] Fetched 77.5 kB in 0s (4542 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp81ed7aq0/libgdbm6t64_1.26-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libuchardet0 arm64 0.0.8-2 [69.0 kB] Fetched 69.0 kB in 0s (4009 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppz6oa7ei/libuchardet0_0.0.8-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libjpeg-dev arm64 1:2.1.5-4 [72.2 kB] Fetched 72.2 kB in 0s (3824 kB/s) dpkg-name: info: moved 'libjpeg-dev_1%3a2.1.5-4_arm64.deb' to '/srv/rebuilderd/tmp/tmprk4lbcrq/libjpeg-dev_2.1.5-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpam-modules-bin arm64 1.7.0-5 [48.3 kB] Fetched 48.3 kB in 0s (2612 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn_w5cpxy/libpam-modules-bin_1.7.0-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg1-10 [19.8 kB] Fetched 19.8 kB in 0s (1162 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_k0z1qxz/libsasl2-modules-db_2.1.28+dfsg1-10_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libsz2 arm64 1.1.4-2 [8072 B] Fetched 8072 B in 0s (494 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuuy_mv4g/libsz2_1.1.4-2_arm64.deb' Downloading dependency 1 of 235: libsmartcols1:arm64=2.41.2-4 Downloading dependency 2 of 235: libarchive13t64:arm64=3.7.4-4+b1 Downloading dependency 3 of 235: zlib1g:arm64=1:1.3.dfsg+really1.3.1-1+b1 Downloading dependency 4 of 235: libgssrpc4t64:arm64=1.21.3-5 Downloading dependency 5 of 235: libhdf5-dev:arm64=1.14.5+repack-4 Downloading dependency 6 of 235: debhelper:arm64=13.28 Downloading dependency 7 of 235: bc:arm64=1.07.1-4+b1 Downloading dependency 8 of 235: librhash1:arm64=1.4.6-1 Downloading dependency 9 of 235: librtmp-dev:arm64=2.4+20151223.gitfa8646d.1-3 Downloading dependency 10 of 235: libngtcp2-crypto-ossl-dev:arm64=1.16.0-1 Downloading dependency 11 of 235: pkgconf-bin:arm64=1.8.1-4 Downloading dependency 12 of 235: libjpeg62-turbo:arm64=1:2.1.5-4 Downloading dependency 13 of 235: libidn2-dev:arm64=2.3.8-4 Downloading dependency 14 of 235: libpkgconf3:arm64=1.8.1-4 Downloading dependency 15 of 235: cpp:arm64=4:15.2.0-4 Downloading dependency 16 of 235: libsframe2:arm64=2.45-7 Downloading dependency 17 of 235: xz-utils:arm64=5.8.1-2 Downloading dependency 18 of 235: libxxhash0:arm64=0.8.3-2 Downloading dependency 19 of 235: libgnutls28-dev:arm64=3.8.10-2 Downloading dependency 20 of 235: ncurses-bin:arm64=6.5+20250216-2 Downloading dependency 21 of 235: dh-autoreconf:arm64=21 Downloading dependency 22 of 235: readline-common:arm64=8.3-3 Downloading dependency 23 of 235: libmpc3:arm64=1.3.1-2 Downloading dependency 24 of 235: base-passwd:arm64=3.6.7 Downloading dependency 25 of 235: libdpkg-perl:arm64=1.22.21 Downloading dependency 26 of 235: libsystemd0:arm64=258.1-1 Downloading dependency 27 of 235: automake:arm64=1:1.18.1-2 Downloading dependency 28 of 235: libjpeg62-turbo-dev:arm64=1:2.1.5-4 Downloading dependency 29 of 235: libreadline8t64:arm64=8.3-3 Downloading dependency 30 of 235: libnghttp2-14:arm64=1.64.0-1.1+b1 Downloading dependency 31 of 235: libc-dev-bin:arm64=2.41-12 Downloading dependency 32 of 235: g++:arm64=4:15.2.0-4 Downloading dependency 33 of 235: libgmpxx4ldbl:arm64=2:6.3.0+dfsg-5 Downloading dependency 34 of 235: groff-base:arm64=1.23.0-9 Downloading dependency 35 of 235: cmake-data:arm64=4.1.1+really3.31.6-2 Downloading dependency 36 of 235: libjsoncpp26:arm64=1.9.6-4 Downloading dependency 37 of 235: libcap2:arm64=1:2.75-10+b1 Downloading dependency 38 of 235: build-essential:arm64=12.12 Downloading dependency 39 of 235: libkadm5srv-mit12:arm64=1.21.3-5 Downloading dependency 40 of 235: libkrb5-dev:arm64=1.21.3-5 Downloading dependency 41 of 235: libngtcp2-crypto-ossl0:arm64=1.16.0-1 Downloading dependency 42 of 235: libgmp-dev:arm64=2:6.3.0+dfsg-5 Downloading dependency 43 of 235: libkrb5-3:arm64=1.21.3-5 Downloading dependency 44 of 235: libcrypt1:arm64=1:4.4.38-1 Downloading dependency 45 of 235: libssl3t64:arm64=3.5.4-1 Downloading dependency 46 of 235: cpp-15:arm64=15.2.0-4 Downloading dependency 47 of 235: libcurl4-openssl-dev:arm64=8.16.0-4 Downloading dependency 48 of 235: diffutils:arm64=1:3.10-4 Downloading dependency 49 of 235: comerr-dev:arm64=2.1-1.47.2-3+b3 Downloading dependency 50 of 235: libmpfr6:arm64=4.2.2-2 Downloading dependency 51 of 235: libstdc++-15-dev:arm64=15.2.0-4 Downloading dependency 52 of 235: libzstd1:arm64=1.5.7+dfsg-2 Downloading dependency 53 of 235: pkgconf:arm64=1.8.1-4 Downloading dependency 54 of 235: liblz4-1:arm64=1.10.0-4 Downloading dependency 55 of 235: libdb5.3t64:arm64=5.3.28+dfsg2-10 Downloading dependency 56 of 235: libc-bin:arm64=2.41-12 Downloading dependency 57 of 235: cpp-aarch64-linux-gnu:arm64=4:15.2.0-4 Downloading dependency 58 of 235: libmagic-mgc:arm64=1:5.46-5 Downloading dependency 59 of 235: libldap-dev:arm64=2.6.10+dfsg-1 Downloading dependency 60 of 235: libhdf5-hl-cpp-310:arm64=1.14.5+repack-4 Downloading dependency 61 of 235: libngtcp2-dev:arm64=1.16.0-1 Downloading dependency 62 of 235: libaudit-common:arm64=1:4.1.2-1 Downloading dependency 63 of 235: libhdf5-cpp-310:arm64=1.14.5+repack-4 Downloading dependency 64 of 235: libuuid1:arm64=2.41.2-4 Downloading dependency 65 of 235: ncurses-base:arm64=6.5+20250216-2 Downloading dependency 66 of 235: libubsan1:arm64=15.2.0-4 Downloading dependency 67 of 235: gettext-base:arm64=0.23.1-2+b1 Downloading dependency 68 of 235: krb5-multidev:arm64=1.21.3-5 Downloading dependency 69 of 235: coreutils:arm64=9.7-3 Downloading dependency 70 of 235: libkdb5-10t64:arm64=1.21.3-5 Downloading dependency 71 of 235: libssl-dev:arm64=3.5.4-1 Downloading dependency 72 of 235: libnettle8t64:arm64=3.10.2-1 Downloading dependency 73 of 235: libpam-runtime:arm64=1.7.0-5 Downloading dependency 74 of 235: bzip2:arm64=1.0.8-6 Downloading dependency 75 of 235: libpcre2-8-0:arm64=10.46-1 Downloading dependency 76 of 235: dpkg-dev:arm64=1.22.21 Downloading dependency 77 of 235: libunbound8:arm64=1.24.0-2 Downloading dependency 78 of 235: libc6-dev:arm64=2.41-12 Downloading dependency 79 of 235: gcc-aarch64-linux-gnu:arm64=4:15.2.0-4 Downloading dependency 80 of 235: libdebhelper-perl:arm64=13.28 Downloading dependency 81 of 235: libseccomp2:arm64=2.6.0-2 Downloading dependency 82 of 235: init-system-helpers:arm64=1.69 Downloading dependency 83 of 235: sensible-utils:arm64=0.0.26 Downloading dependency 84 of 235: libhdf5-310:arm64=1.14.5+repack-4 Downloading dependency 85 of 235: sysvinit-utils:arm64=3.14-4 Downloading dependency 86 of 235: libmd0:arm64=1.1.0-2+b1 Downloading dependency 87 of 235: libtinfo6:arm64=6.5+20250216-2 Downloading dependency 88 of 235: libnghttp3-9:arm64=1.12.0-1 Downloading dependency 89 of 235: libssh2-1t64:arm64=1.11.1-1 Downloading dependency 90 of 235: libtsan2:arm64=15.2.0-4 Downloading dependency 91 of 235: hostname:arm64=3.25 Downloading dependency 92 of 235: libcom-err2:arm64=1.47.2-3+b3 Downloading dependency 93 of 235: g++-aarch64-linux-gnu:arm64=4:15.2.0-4 Downloading dependency 94 of 235: libgcc-s1:arm64=15.2.0-4 Downloading dependency 95 of 235: gcc-15-aarch64-linux-gnu:arm64=15.2.0-4 Downloading dependency 96 of 235: gcc-15-base:arm64=15.2.0-4 Downloading dependency 97 of 235: libboost-dev:arm64=1.83.0.2+b2 Downloading dependency 98 of 235: autotools-dev:arm64=20240727.1 Downloading dependency 99 of 235: dash:arm64=0.5.12-12 Downloading dependency 100 of 235: gcc-15:arm64=15.2.0-4 Downloading dependency 101 of 235: libhdf5-hl-fortran-310:arm64=1.14.5+repack-4 Downloading dependency 102 of 235: libpsl-dev:arm64=0.21.2-1.1+b1 Downloading dependency 103 of 235: mawk:arm64=1.3.4.20250131-1 Downloading dependency 104 of 235: dpkg:arm64=1.22.21 Downloading dependency 105 of 235: gettext:arm64=0.23.1-2+b1 Downloading dependency 106 of 235: cmake:arm64=4.1.1+really3.31.6-2 Downloading dependency 107 of 235: libatomic1:arm64=15.2.0-4 Downloading dependency 108 of 235: libgcc-15-dev:arm64=15.2.0-4 Downloading dependency 109 of 235: hdf5-helpers:arm64=1.14.5+repack-4 Downloading dependency 110 of 235: libbrotli1:arm64=1.1.0-2+b7 Downloading dependency 111 of 235: linux-libc-dev:arm64=6.16.12-1 Downloading dependency 112 of 235: libpam-modules:arm64=1.7.0-5 Downloading dependency 113 of 235: libcap-ng0:arm64=0.8.5-4+b1 Downloading dependency 114 of 235: libgmp10:arm64=2:6.3.0+dfsg-5 Downloading dependency 115 of 235: libcppunit-dev:arm64=1.15.1-4+b2 Downloading dependency 116 of 235: libhdf5-fortran-310:arm64=1.14.5+repack-4 Downloading dependency 117 of 235: bsdextrautils:arm64=2.41.2-4 Downloading dependency 118 of 235: libcrypt-dev:arm64=1:4.4.38-1 Downloading dependency 119 of 235: bash:arm64=5.3-1 Downloading dependency 120 of 235: autoconf:arm64=2.72-3.1 Downloading dependency 121 of 235: libtasn1-6:arm64=4.20.0-2 Downloading dependency 122 of 235: libudev1:arm64=258.1-1 Downloading dependency 123 of 235: libarchive-zip-perl:arm64=1.68-1 Downloading dependency 124 of 235: libgdbm6t64:arm64=1.26-1 Downloading dependency 125 of 235: libuchardet0:arm64=0.0.8-2 Downloading dependency 126 of 235: libjpeg-dev:arm64=1:2.1.5-4 Downloading dependency 127 of 235: libpam-modules-bin:arm64=1.7.0-5 Downloading dependency 128 of 235: libsasl2-modules-db:arm64=2.1.28+dfsg1-10 Downloading dependency 129 of 235: libsz2:arm64=1.1.4-2 Downloading dependency 130 of 235: libp11-kit-dev:arm64=0.25.9-2Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 libp11-kit-dev arm64 0.25.9-2 [220 kB] Fetched 220 kB in 0s (12.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgo12v3bu/libp11-kit-dev_0.25.9-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libssh2-1-dev arm64 1.11.1-1 [388 kB] Fetched 388 kB in 0s (19.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpaz56j2w3/libssh2-1-dev_1.11.1-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libattr1 arm64 1:2.5.2-3 [22.7 kB] Fetched 22.7 kB in 0s (1384 kB/s) dpkg-name: info: moved 'libattr1_1%3a2.5.2-3_arm64.deb' to '/srv/rebuilderd/tmp/tmpz5jy00mk/libattr1_2.5.2-3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 libkrb5support0 arm64 1.21.3-5 [32.4 kB] Fetched 32.4 kB in 0s (1942 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprx9r4qwx/libkrb5support0_1.21.3-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 liblzma5 arm64 5.8.1-2 [302 kB] Fetched 302 kB in 0s (16.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcw860fco/liblzma5_5.8.1-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 libctf-nobfd0 arm64 2.45-7 [158 kB] Fetched 158 kB in 0s (8720 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpre2zvd71/libctf-nobfd0_2.45-7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 m4 arm64 1.4.20-2 [315 kB] Fetched 315 kB in 0s (16.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp172tsvab/m4_1.4.20-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 libgprofng0 arm64 2.45-7 [702 kB] Fetched 702 kB in 0s (29.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp2efwt60/libgprofng0_2.45-7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libbrotli-dev arm64 1.1.0-2+b7 [308 kB] Fetched 308 kB in 0s (16.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxkreb4ii/libbrotli-dev_1.1.0-2+b7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 gcc arm64 4:15.2.0-4 [5156 B] Fetched 5156 B in 0s (301 kB/s) dpkg-name: info: moved 'gcc_4%3a15.2.0-4_arm64.deb' to '/srv/rebuilderd/tmp/tmpbm4y7m6v/gcc_15.2.0-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-3 [56.3 kB] Fetched 56.3 kB in 0s (3331 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzacpfklo/librtmp1_2.4+20151223.gitfa8646d.1-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libmagic1t64 arm64 1:5.46-5 [103 kB] Fetched 103 kB in 0s (5839 kB/s) dpkg-name: info: moved 'libmagic1t64_1%3a5.46-5_arm64.deb' to '/srv/rebuilderd/tmp/tmpjsyyp_l8/libmagic1t64_5.46-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libzstd-dev arm64 1.5.7+dfsg-2 [330 kB] Fetched 330 kB in 0s (17.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpptlzs5nj/libzstd-dev_1.5.7+dfsg-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 tar arm64 1.35+dfsg-3.1 [802 kB] Fetched 802 kB in 0s (34.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8bvqtz_e/tar_1.35+dfsg-3.1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libidn2-0 arm64 2.3.8-4 [108 kB] Fetched 108 kB in 0s (6152 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppfxo5uxc/libidn2-0_2.3.8-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libnghttp3-dev arm64 1.12.0-1 [91.6 kB] Fetched 91.6 kB in 0s (5264 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzc9wrpaw/libnghttp3-dev_1.12.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpam0g arm64 1.7.0-5 [68.8 kB] Fetched 68.8 kB in 0s (4075 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr7ysvrbi/libpam0g_1.7.0-5_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 libbinutils arm64 2.45-7 [699 kB] Fetched 699 kB in 0s (30.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpttx086ix/libbinutils_2.45-7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libsasl2-2 arm64 2.1.28+dfsg1-10 [55.0 kB] Fetched 55.0 kB in 0s (3268 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4s7s078_/libsasl2-2_2.1.28+dfsg1-10_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 libasan8 arm64 15.2.0-4 [2600 kB] Fetched 2600 kB in 0s (68.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbhhssjjt/libasan8_15.2.0-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 libk5crypto3 arm64 1.21.3-5 [81.2 kB] Fetched 81.2 kB in 0s (4653 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz9zw1ygw/libk5crypto3_1.21.3-5_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 libp11-kit0 arm64 0.25.9-2 [420 kB] Fetched 420 kB in 0s (20.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp89yfeiwy/libp11-kit0_0.25.9-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 libgcc-14-dev arm64 14.3.0-8 [2364 kB] Fetched 2364 kB in 0s (64.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5l0clld0/libgcc-14-dev_14.3.0-8_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB] Fetched 40.2 kB in 0s (2442 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_yhdrwxr/libpipeline1_1.5.8-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 libcc1-0 arm64 15.2.0-4 [41.4 kB] Fetched 41.4 kB in 0s (3826 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfllssyq5/libcc1-0_15.2.0-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 man-db arm64 2.13.1-1 [1453 kB] Fetched 1453 kB in 0s (50.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpba6xcn6i/man-db_2.13.1-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libcppunit-1.15-0 arm64 1.15.1-4+b2 [141 kB] Fetched 141 kB in 0s (7630 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpa2g1giqh/libcppunit-1.15-0_1.15.1-4+b2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 g++-15 arm64 15.2.0-4 [23.4 kB] Fetched 23.4 kB in 0s (1395 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbm3r4eri/g++-15_15.2.0-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 binutils-aarch64-linux-gnu arm64 2.45-7 [875 kB] Fetched 875 kB in 0s (37.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx40wwqjn/binutils-aarch64-linux-gnu_2.45-7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libngtcp2-16 arm64 1.16.0-1 [123 kB] Fetched 123 kB in 0s (6550 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpa1r2wysa/libngtcp2-16_1.16.0-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 libgnutls-openssl27t64 arm64 3.8.10-2 [456 kB] Fetched 456 kB in 0s (22.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprn91j2c4/libgnutls-openssl27t64_3.8.10-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libuv1t64 arm64 1.51.0-2 [150 kB] Fetched 150 kB in 0s (8327 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvp6j_gor/libuv1t64_1.51.0-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libkeyutils1 arm64 1.6.3-6 [9716 B] Fetched 9716 B in 0s (573 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppjxn9vyw/libkeyutils1_1.6.3-6_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 autopoint all 0.23.1-2 [770 kB] Fetched 770 kB in 0s (32.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3322804g/autopoint_0.23.1-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 libctf0 arm64 2.45-7 [89.8 kB] Fetched 89.8 kB in 0s (5265 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppmz74ts8/libctf0_2.45-7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 findutils arm64 4.10.0-3 [696 kB] Fetched 696 kB in 0s (29.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpft1i94pl/findutils_4.10.0-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgdbm-compat4t64 arm64 1.26-1 [52.8 kB] Fetched 52.8 kB in 0s (3050 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpymm4z7t6/libgdbm-compat4t64_1.26-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 libcurl4t64 arm64 8.16.0-4 [368 kB] Fetched 368 kB in 0s (19.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt85qq_rf/libcurl4t64_8.16.0-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 libgomp1 arm64 15.2.0-4 [127 kB] Fetched 127 kB in 0s (6917 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc4hak2eu/libgomp1_15.2.0-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 dh-strip-nondeterminism all 1.15.0-1 [8812 B] Fetched 8812 B in 0s (511 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppxzj0a46/dh-strip-nondeterminism_1.15.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpsl5t64 arm64 0.21.2-1.1+b1 [57.1 kB] Fetched 57.1 kB in 0s (3352 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo9t496j7/libpsl5t64_0.21.2-1.1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 debconf all 1.5.91 [121 kB] Fetched 121 kB in 0s (6354 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgnooxbqc/debconf_1.5.91_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libexpat1 arm64 2.7.3-1 [96.5 kB] Fetched 96.5 kB in 0s (5275 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpey3gkqp_/libexpat1_2.7.3-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 file arm64 1:5.46-5 [43.7 kB] Fetched 43.7 kB in 0s (2594 kB/s) dpkg-name: info: moved 'file_1%3a5.46-5_arm64.deb' to '/srv/rebuilderd/tmp/tmplor82z4s/file_5.46-5_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 libstdc++-14-dev arm64 14.3.0-8 [2567 kB] Fetched 2567 kB in 0s (68.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp28t064p5/libstdc++-14-dev_14.3.0-8_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libblkid1 arm64 2.41.2-4 [167 kB] Fetched 167 kB in 0s (9034 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpe4yf4xzb/libblkid1_2.41.2-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libfile-stripnondeterminism-perl all 1.15.0-1 [19.9 kB] Fetched 19.9 kB in 0s (1204 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphelo_zpv/libfile-stripnondeterminism-perl_1.15.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 debianutils arm64 5.23.2 [92.4 kB] Fetched 92.4 kB in 0s (8662 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprss6p7kn/debianutils_5.23.2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libunistring5 arm64 1.3-2 [453 kB] Fetched 453 kB in 0s (17.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_r62ts07/libunistring5_1.3-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 openssl-provider-legacy arm64 3.5.4-1 [306 kB] Fetched 306 kB in 0s (15.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp6soq0fd/openssl-provider-legacy_3.5.4-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libacl1 arm64 2.3.2-2+b1 [32.2 kB] Fetched 32.2 kB in 0s (1871 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8a0dwqxc/libacl1_2.3.2-2+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 grep arm64 3.12-1 [440 kB] Fetched 440 kB in 0s (20.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpaow8furl/grep_3.12-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libldap2 arm64 2.6.10+dfsg-1 [179 kB] Fetched 179 kB in 0s (9244 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplch8ypey/libldap2_2.6.10+dfsg-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libaec0 arm64 1.1.4-2 [22.6 kB] Fetched 22.6 kB in 0s (1349 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgg8jcjok/libaec0_1.1.4-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libevent-2.1-7t64 arm64 2.1.12-stable-10+b1 [170 kB] Fetched 170 kB in 0s (9401 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp55r2wmq6/libevent-2.1-7t64_2.1.12-stable-10+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 libhwasan0 arm64 15.2.0-4 [1480 kB] Fetched 1480 kB in 0s (51.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7xu49qgm/libhwasan0_15.2.0-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 liblsan0 arm64 15.2.0-4 [1194 kB] Fetched 1194 kB in 0s (45.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptyl9voog/liblsan0_15.2.0-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 gcc-14-base arm64 14.3.0-8 [52.1 kB] Fetched 52.1 kB in 0s (2870 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfsr491gr/gcc-14-base_14.3.0-8_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 libgssapi-krb5-2 arm64 1.21.3-5 [127 kB] Fetched 127 kB in 0s (7160 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3ers1acg/libgssapi-krb5-2_1.21.3-5_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 libstdc++6 arm64 15.2.0-4 [647 kB] Fetched 647 kB in 0s (29.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgxc1_eit/libstdc++6_15.2.0-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 g++-15-aarch64-linux-gnu arm64 15.2.0-4 [79.3 MB] Fetched 79.3 MB in 0s (173 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgdhpe1f7/g++-15-aarch64-linux-gnu_15.2.0-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 libperl5.40 arm64 5.40.1-6 [4142 kB] Fetched 4142 kB in 0s (76.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpldp6_94v/libperl5.40_5.40.1-6_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 libgnutls-dane0t64 arm64 3.8.10-2 [456 kB] Fetched 456 kB in 0s (22.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9zoi6xk0/libgnutls-dane0t64_3.8.10-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libtasn1-6-dev arm64 4.20.0-2 [96.7 kB] Fetched 96.7 kB in 0s (5528 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphnypg7m_/libtasn1-6-dev_4.20.0-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1+b1 [917 kB] Fetched 917 kB in 0s (37.8 MB/s) dpkg-name: info: moved 'zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmp1vkgtbou/zlib1g-dev_1.3.dfsg+really1.3.1-1+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 make arm64 4.4.1-2 [452 kB] Fetched 452 kB in 0s (22.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqs8cf147/make_4.4.1-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libaec-dev arm64 1.1.4-2 [20.3 kB] Fetched 20.3 kB in 0s (1250 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3x6rmxkp/libaec-dev_1.1.4-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 libgnutls30t64 arm64 3.8.10-2 [1395 kB] Fetched 1395 kB in 0s (50.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpllzqzlbt/libgnutls30t64_3.8.10-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 libtool all 2.5.4-5 [540 kB] Fetched 540 kB in 0s (25.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy5s2y4e8/libtool_2.5.4-5_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 cpp-15-aarch64-linux-gnu arm64 15.2.0-4 [74.3 MB] Fetched 74.3 MB in 0s (183 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6iltlx3p/cpp-15-aarch64-linux-gnu_15.2.0-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libbz2-1.0 arm64 1.0.8-6 [37.8 kB] Fetched 37.8 kB in 0s (2183 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoy1zn_pz/libbz2-1.0_1.0.8-6_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libc6 arm64 2.41-12 [2489 kB] Fetched 2489 kB in 0s (66.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm77d8eth/libc6_2.41-12_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libhdf5-hl-310 arm64 1.14.5+repack-4 [68.4 kB] Fetched 68.4 kB in 0s (3809 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjcgo3r8i/libhdf5-hl-310_1.14.5+repack-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 libitm1 arm64 15.2.0-4 [24.2 kB] Fetched 24.2 kB in 0s (1239 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx_4_5slb/libitm1_15.2.0-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 libelf1t64 arm64 0.193-3 [189 kB] Fetched 189 kB in 0s (9464 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzt9nrjc6/libelf1t64_0.193-3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 libncursesw6 arm64 6.5+20250216-2 [124 kB] Fetched 124 kB in 0s (6914 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2kdzyq96/libncursesw6_6.5+20250216-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 sed arm64 4.9-2+b1 [326 kB] Fetched 326 kB in 0s (16.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfg4qi34j/sed_4.9-2+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 binutils-common arm64 2.45-7 [2558 kB] Fetched 2558 kB in 0s (68.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd9trgtfk/binutils-common_2.45-7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 patch arm64 2.8-2 [128 kB] Fetched 128 kB in 0s (7057 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqp7lft3h/patch_2.8-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 procps arm64 2:4.0.4-9 [871 kB] Fetched 871 kB in 0s (36.5 MB/s) dpkg-name: info: moved 'procps_2%3a4.0.4-9_arm64.deb' to '/srv/rebuilderd/tmp/tmp7exnrahl/procps_4.0.4-9_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 perl arm64 5.40.1-6 [267 kB] Fetched 267 kB in 0s (13.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsjtu729k/perl_5.40.1-6_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 nettle-dev arm64 3.10.2-1 [1319 kB] Fetched 1319 kB in 0s (48.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbxldou3e/nettle-dev_3.10.2-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 rpcsvc-proto arm64 1.4.3-1+b1 [60.5 kB] Fetched 60.5 kB in 0s (3336 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpubr1u8ow/rpcsvc-proto_1.4.3-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libboost1.83-dev arm64 1.83.0-5 [10.6 MB] Fetched 10.6 MB in 0s (112 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnbtn9722/libboost1.83-dev_1.83.0-5_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 libxml2-16 arm64 2.14.6+dfsg-0.1 [601 kB] Fetched 601 kB in 0s (27.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppofr595b/libxml2-16_2.14.6+dfsg-0.1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libhogweed6t64 arm64 3.10.2-1 [332 kB] Fetched 332 kB in 0s (17.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0x5rg5z3/libhogweed6t64_3.10.2-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libproc2-0 arm64 2:4.0.4-9 [62.8 kB] Fetched 62.8 kB in 0s (3598 kB/s) dpkg-name: info: moved 'libproc2-0_2%3a4.0.4-9_arm64.deb' to '/srv/rebuilderd/tmp/tmpa7mqvuc7/libproc2-0_4.0.4-9_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libffi8 arm64 3.5.2-2 [21.5 kB] Fetched 21.5 kB in 0s (1256 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpprnfcf7v/libffi8_3.5.2-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libnghttp2-dev arm64 1.64.0-1.1+b1 [112 kB] Fetched 112 kB in 0s (6238 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpddhfd7lp/libnghttp2-dev_1.64.0-1.1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libisl23 arm64 0.27-1 [601 kB] Fetched 601 kB in 0s (22.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp59hsh6vk/libisl23_0.27-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libmount1 arm64 2.41.2-4 [199 kB] Fetched 199 kB in 0s (8177 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2foge6og/libmount1_2.41.2-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 base-files arm64 14 [72.9 kB] Fetched 72.9 kB in 0s (4296 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp37do6w_a/base-files_14_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 libkadm5clnt-mit12 arm64 1.21.3-5 [41.1 kB] Fetched 41.1 kB in 0s (2057 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9q5cncl5/libkadm5clnt-mit12_1.21.3-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 dwz arm64 0.16-2 [100 kB] Fetched 100 kB in 0s (5095 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7u_bah5u/dwz_0.16-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 binutils arm64 2.45-7 [265 kB] Fetched 265 kB in 0s (14.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3gzpt9bm/binutils_2.45-7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Fetched 22.9 kB in 0s (1371 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_y6lilax/intltool-debian_0.35.0+20060710.6_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 perl-modules-5.40 all 5.40.1-6 [3019 kB] Fetched 3019 kB in 0s (130 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfj5fkjkn/perl-modules-5.40_5.40.1-6_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Fetched 248 kB in 0s (12.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp81pnuj_a/po-debconf_1.0.21+nmu1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 libdebconfclient0 arm64 0.280 [10.8 kB] Fetched 10.8 kB in 0s (638 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp05pykzrg/libdebconfclient0_0.280_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libjansson4 arm64 2.14-2+b3 [39.2 kB] Fetched 39.2 kB in 0s (2354 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpun3u7vsq/libjansson4_2.14-2+b3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 libselinux1 arm64 3.8.1-1 [79.4 kB] Fetched 79.4 kB in 0s (4658 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplvjvzw_c/libselinux1_3.8.1-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 perl-base arm64 5.40.1-6 [1527 kB] Fetched 1527 kB in 0s (70.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdq68qdqy/perl-base_5.40.1-6_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 util-linux arm64 2.41.2-4 [1121 kB] Fetched 1121 kB in 0s (69.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl_ulv9sz/util-linux_2.41.2-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 gzip arm64 1.13-1 [135 kB] Fetched 135 kB in 0s (7559 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxy74k8i7/gzip_1.13-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libaudit1 arm64 1:4.1.2-1 [59.5 kB] Fetched 59.5 kB in 0s (3498 kB/s) dpkg-name: info: moved 'libaudit1_1%3a4.1.2-1_arm64.deb' to '/srv/rebuilderd/tmp/tmp5pfhjwwy/libaudit1_4.1.2-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251017T144549Z sid/main arm64 libgfortran5 arm64 15.2.0-4 [371 kB] Fetched 371 kB in 0s (18.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzeijvf0u/libgfortran5_15.2.0-4_arm64.deb' dpkg-buildpackage: info: source package debootsnap-dummy dpkg-buildpackage: info: source version 1.0 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Equivs Dummy Package Generator dpkg-buildpackage: info: host architecture arm64 dpkg-source --before-build . debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/debootsnap-dummy/ dh_install dh_installdocs dh_installchangelogs dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'debootsnap-dummy' in '../debootsnap-dummy_1.0_all.deb'. dpkg-genbuildinfo --build=binary -O../debootsnap-dummy_1.0_arm64.buildinfo dpkg-genchanges --build=binary -O../debootsnap-dummy_1.0_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) The package has been created. Attention, the package has been created in the /srv/rebuilderd/tmp/tmp3e1na1xq/cache directory, not in ".." as indicated by the message above! I: automatically chosen mode: unshare I: chroot architecture arm64 is equal to the host's architecture I: using /srv/rebuilderd/tmp/mmdebstrap.520jXSrCCM as tempdir I: running --setup-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/setup00.sh /srv/rebuilderd/tmp/mmdebstrap.520jXSrCCM 127.0.0.1 - - [29/Nov/2025 11:22:03] code 404, message File not found 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./InRelease HTTP/1.1" 404 - Ign:1 http://localhost:37767 ./ InRelease 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./Release HTTP/1.1" 200 - Get:2 http://localhost:37767 ./ Release [462 B] 127.0.0.1 - - [29/Nov/2025 11:22:03] code 404, message File not found 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./Release.gpg HTTP/1.1" 404 - Ign:3 http://localhost:37767 ./ Release.gpg 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./Packages HTTP/1.1" 200 - Get:4 http://localhost:37767 ./ Packages [293 kB] Fetched 294 kB in 0s (8279 kB/s) Reading package lists... usr-is-merged found but not real -- not running merged-usr setup hook I: skipping apt-get update because it was already run I: downloading packages with apt... 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./gcc-15-base_15.2.0-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./libc6_2.41-12_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./libgcc-s1_15.2.0-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./mawk_1.3.4.20250131-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./base-files_14_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./libtinfo6_6.5%2b20250216-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./debianutils_5.23.2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./bash_5.3-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./libacl1_2.3.2-2%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./libattr1_2.5.2-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./libcap2_2.75-10%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./libgmp10_6.3.0%2bdfsg-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./libpcre2-8-0_10.46-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./libselinux1_3.8.1-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./libzstd1_1.5.7%2bdfsg-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./zlib1g_1.3.dfsg%2breally1.3.1-1%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./libssl3t64_3.5.4-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./openssl-provider-legacy_3.5.4-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./libsystemd0_258.1-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./coreutils_9.7-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./dash_0.5.12-12_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./diffutils_3.10-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./libbz2-1.0_1.0.8-6_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./liblzma5_5.8.1-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./libmd0_1.1.0-2%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./tar_1.35%2bdfsg-3.1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./dpkg_1.22.21_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./findutils_4.10.0-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./grep_3.12-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./gzip_1.13-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./hostname_3.25_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./ncurses-bin_6.5%2b20250216-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./libcrypt1_4.4.38-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./perl-base_5.40.1-6_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./sed_4.9-2%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./libaudit-common_4.1.2-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./libcap-ng0_0.8.5-4%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./libaudit1_4.1.2-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./libdb5.3t64_5.3.28%2bdfsg2-10_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./debconf_1.5.91_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./libpam0g_1.7.0-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./libpam-modules-bin_1.7.0-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./libpam-modules_1.7.0-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./libpam-runtime_1.7.0-5_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./libblkid1_2.41.2-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./libmount1_2.41.2-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./libsmartcols1_2.41.2-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./libudev1_258.1-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./libuuid1_2.41.2-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./util-linux_2.41.2-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./libdebconfclient0_0.280_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./base-passwd_3.6.7_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./init-system-helpers_1.69_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./libc-bin_2.41-12_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./ncurses-base_6.5%2b20250216-2_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:03] "GET /./sysvinit-utils_3.14-4_arm64.deb HTTP/1.1" 200 - I: extracting archives... I: running --extract-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/extract00.sh /srv/rebuilderd/tmp/mmdebstrap.520jXSrCCM 127.0.0.1 - - [29/Nov/2025 11:22:06] code 404, message File not found 127.0.0.1 - - [29/Nov/2025 11:22:06] "GET /./InRelease HTTP/1.1" 404 - Ign:1 http://localhost:37767 ./ InRelease 127.0.0.1 - - [29/Nov/2025 11:22:06] "GET /./Release HTTP/1.1" 304 - Hit:2 http://localhost:37767 ./ Release 127.0.0.1 - - [29/Nov/2025 11:22:06] code 404, message File not found 127.0.0.1 - - [29/Nov/2025 11:22:06] "GET /./Release.gpg HTTP/1.1" 404 - Ign:3 http://localhost:37767 ./ Release.gpg Reading package lists... usr-is-merged found but not real -- not running merged-usr extract hook I: installing essential packages... I: running --essential-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/essential00.sh /srv/rebuilderd/tmp/mmdebstrap.520jXSrCCM usr-is-merged was not installed in a previous hook -- not running merged-usr essential hook I: installing remaining packages inside the chroot... 127.0.0.1 - - [29/Nov/2025 11:22:15] "GET /./libexpat1_2.7.3-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:15] "GET /./sensible-utils_0.0.26_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:15] "GET /./libstdc%2b%2b6_15.2.0-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:15] "GET /./libuchardet0_0.0.8-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:15] "GET /./groff-base_1.23.0-9_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:15] "GET /./bsdextrautils_2.41.2-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:15] "GET /./libgdbm6t64_1.26-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:15] "GET /./libpipeline1_1.5.8-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:15] "GET /./libseccomp2_2.6.0-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:15] "GET /./man-db_2.13.1-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:15] "GET /./libncursesw6_6.5%2b20250216-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:15] "GET /./libproc2-0_4.0.4-9_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:15] "GET /./procps_4.0.4-9_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:15] "GET /./readline-common_8.3-3_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:15] "GET /./libreadline8t64_8.3-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:15] "GET /./bc_1.07.1-4%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:15] "GET /./bzip2_1.0.8-6_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:15] "GET /./libmagic-mgc_5.46-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:15] "GET /./libmagic1t64_5.46-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:15] "GET /./file_5.46-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:15] "GET /./gettext-base_0.23.1-2%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:15] "GET /./perl-modules-5.40_5.40.1-6_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:15] "GET /./libgdbm-compat4t64_1.26-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:15] "GET /./libperl5.40_5.40.1-6_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:15] "GET /./perl_5.40.1-6_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:15] "GET /./xz-utils_5.8.1-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:15] "GET /./m4_1.4.20-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:15] "GET /./autoconf_2.72-3.1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:15] "GET /./autotools-dev_20240727.1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:15] "GET /./automake_1.18.1-2_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:15] "GET /./autopoint_0.23.1-2_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:15] "GET /./libsframe2_2.45-7_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:15] "GET /./binutils-common_2.45-7_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:15] "GET /./libbinutils_2.45-7_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:15] "GET /./libgprofng0_2.45-7_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:15] "GET /./libctf-nobfd0_2.45-7_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:15] "GET /./libctf0_2.45-7_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:15] "GET /./libjansson4_2.14-2%2bb3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:15] "GET /./binutils-aarch64-linux-gnu_2.45-7_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:15] "GET /./binutils_2.45-7_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:15] "GET /./libc-dev-bin_2.41-12_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:15] "GET /./linux-libc-dev_6.16.12-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:15] "GET /./libcrypt-dev_4.4.38-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:15] "GET /./rpcsvc-proto_1.4.3-1%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:15] "GET /./libc6-dev_2.41-12_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:16] "GET /./libisl23_0.27-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:16] "GET /./libmpfr6_4.2.2-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:16] "GET /./libmpc3_1.3.1-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:16] "GET /./cpp-15-aarch64-linux-gnu_15.2.0-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:16] "GET /./cpp-15_15.2.0-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:16] "GET /./cpp-aarch64-linux-gnu_15.2.0-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:16] "GET /./cpp_15.2.0-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:16] "GET /./libcc1-0_15.2.0-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:16] "GET /./libgomp1_15.2.0-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:16] "GET /./libitm1_15.2.0-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:16] "GET /./libatomic1_15.2.0-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:16] "GET /./libasan8_15.2.0-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:16] "GET /./liblsan0_15.2.0-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:16] "GET /./libtsan2_15.2.0-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:16] "GET /./libubsan1_15.2.0-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:16] "GET /./libhwasan0_15.2.0-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:16] "GET /./libgcc-15-dev_15.2.0-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:16] "GET /./gcc-15-aarch64-linux-gnu_15.2.0-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:17] "GET /./gcc-15_15.2.0-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:17] "GET /./gcc-aarch64-linux-gnu_15.2.0-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:17] "GET /./gcc_15.2.0-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:17] "GET /./libstdc%2b%2b-15-dev_15.2.0-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:17] "GET /./g%2b%2b-15-aarch64-linux-gnu_15.2.0-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:17] "GET /./g%2b%2b-15_15.2.0-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:17] "GET /./g%2b%2b-aarch64-linux-gnu_15.2.0-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:17] "GET /./g%2b%2b_15.2.0-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:17] "GET /./make_4.4.1-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:17] "GET /./libdpkg-perl_1.22.21_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:17] "GET /./patch_2.8-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:17] "GET /./dpkg-dev_1.22.21_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:17] "GET /./build-essential_12.12_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:17] "GET /./cmake-data_4.1.1%2breally3.31.6-2_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libxxhash0_0.8.3-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./liblz4-1_1.10.0-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libnettle8t64_3.10.2-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libxml2-16_2.14.6%2bdfsg-0.1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libarchive13t64_3.7.4-4%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libnghttp3-9_1.12.0-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libngtcp2-16_1.16.0-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libbrotli1_1.1.0-2%2bb7_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libkrb5support0_1.21.3-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libcom-err2_1.47.2-3%2bb3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libk5crypto3_1.21.3-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libkeyutils1_1.6.3-6_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libkrb5-3_1.21.3-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libgssapi-krb5-2_1.21.3-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libunistring5_1.3-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libidn2-0_2.3.8-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libsasl2-modules-db_2.1.28%2bdfsg1-10_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libsasl2-2_2.1.28%2bdfsg1-10_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libldap2_2.6.10%2bdfsg-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libnghttp2-14_1.64.0-1.1%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libngtcp2-crypto-ossl0_1.16.0-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libpsl5t64_0.21.2-1.1%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libhogweed6t64_3.10.2-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libffi8_3.5.2-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libp11-kit0_0.25.9-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libtasn1-6_4.20.0-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libgnutls30t64_3.8.10-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./librtmp1_2.4%2b20151223.gitfa8646d.1-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libssh2-1t64_1.11.1-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libcurl4t64_8.16.0-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libjsoncpp26_1.9.6-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./librhash1_1.4.6-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libuv1t64_1.51.0-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./cmake_4.1.1%2breally3.31.6-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./comerr-dev_2.1-1.47.2-3%2bb3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libdebhelper-perl_13.28_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libtool_2.5.4-5_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./dh-autoreconf_21_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libarchive-zip-perl_1.68-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libfile-stripnondeterminism-perl_1.15.0-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./dh-strip-nondeterminism_1.15.0-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libelf1t64_0.193-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./dwz_0.16-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./gettext_0.23.1-2%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./intltool-debian_0.35.0%2b20060710.6_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./po-debconf_1.0.21%2bnmu1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./debhelper_13.28_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libgssrpc4t64_1.21.3-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libaec0_1.1.4-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libsz2_1.1.4-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libhdf5-310_1.14.5%2brepack-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libgfortran5_15.2.0-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libhdf5-fortran-310_1.14.5%2brepack-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libhdf5-hl-310_1.14.5%2brepack-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libhdf5-hl-fortran-310_1.14.5%2brepack-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libhdf5-cpp-310_1.14.5%2brepack-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libhdf5-hl-cpp-310_1.14.5%2brepack-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./zlib1g-dev_1.3.dfsg%2breally1.3.1-1%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libjpeg62-turbo_2.1.5-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libjpeg62-turbo-dev_2.1.5-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libjpeg-dev_2.1.5-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libaec-dev_1.1.4-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libbrotli-dev_1.1.0-2%2bb7_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libidn2-dev_2.3.8-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libkadm5clnt-mit12_1.21.3-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libkdb5-10t64_1.21.3-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libkadm5srv-mit12_1.21.3-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./krb5-multidev_1.21.3-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libkrb5-dev_1.21.3-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libldap-dev_2.6.10%2bdfsg-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libpkgconf3_1.8.1-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./pkgconf-bin_1.8.1-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./pkgconf_1.8.1-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libnghttp2-dev_1.64.0-1.1%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libnghttp3-dev_1.12.0-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libngtcp2-crypto-ossl-dev_1.16.0-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libngtcp2-dev_1.16.0-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libpsl-dev_0.21.2-1.1%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libgmpxx4ldbl_6.3.0%2bdfsg-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libgmp-dev_6.3.0%2bdfsg-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libevent-2.1-7t64_2.1.12-stable-10%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libunbound8_1.24.0-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libgnutls-dane0t64_3.8.10-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libgnutls-openssl27t64_3.8.10-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libp11-kit-dev_0.25.9-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libtasn1-6-dev_4.20.0-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./nettle-dev_3.10.2-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libgnutls28-dev_3.8.10-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./librtmp-dev_2.4%2b20151223.gitfa8646d.1-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libssl-dev_3.5.4-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libssh2-1-dev_1.11.1-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libzstd-dev_1.5.7%2bdfsg-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libcurl4-openssl-dev_8.16.0-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./hdf5-helpers_1.14.5%2brepack-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libhdf5-dev_1.14.5%2brepack-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./gcc-14-base_14.3.0-8_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libgcc-14-dev_14.3.0-8_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libstdc%2b%2b-14-dev_14.3.0-8_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libboost1.83-dev_1.83.0-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libboost-dev_1.83.0.2%2bb2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libcppunit-1.15-0_1.15.1-4%2bb2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./libcppunit-dev_1.15.1-4%2bb2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 11:22:18] "GET /./debootsnap-dummy_1.0_all.deb HTTP/1.1" 200 - I: running --customize-hook directly: /srv/rebuilderd/tmp/tmp3e1na1xq/apt_install.sh /srv/rebuilderd/tmp/mmdebstrap.520jXSrCCM Reading package lists... Building dependency tree... Reading state information... libsmartcols1 is already the newest version (2.41.2-4). libarchive13t64 is already the newest version (3.7.4-4+b1). libarchive13t64 set to manually installed. zlib1g is already the newest version (1:1.3.dfsg+really1.3.1-1+b1). libgssrpc4t64 is already the newest version (1.21.3-5). libgssrpc4t64 set to manually installed. libhdf5-dev is already the newest version (1.14.5+repack-4). libhdf5-dev set to manually installed. debhelper is already the newest version (13.28). debhelper set to manually installed. bc is already the newest version (1.07.1-4+b1). bc set to manually installed. librhash1 is already the newest version (1.4.6-1). librhash1 set to manually installed. librtmp-dev is already the newest version (2.4+20151223.gitfa8646d.1-3). librtmp-dev set to manually installed. libngtcp2-crypto-ossl-dev is already the newest version (1.16.0-1). libngtcp2-crypto-ossl-dev set to manually installed. pkgconf-bin is already the newest version (1.8.1-4). pkgconf-bin set to manually installed. libjpeg62-turbo is already the newest version (1:2.1.5-4). libjpeg62-turbo set to manually installed. libidn2-dev is already the newest version (2.3.8-4). libidn2-dev set to manually installed. libpkgconf3 is already the newest version (1.8.1-4). libpkgconf3 set to manually installed. cpp is already the newest version (4:15.2.0-4). cpp set to manually installed. libsframe2 is already the newest version (2.45-7). libsframe2 set to manually installed. xz-utils is already the newest version (5.8.1-2). xz-utils set to manually installed. libxxhash0 is already the newest version (0.8.3-2). libxxhash0 set to manually installed. libgnutls28-dev is already the newest version (3.8.10-2). libgnutls28-dev set to manually installed. ncurses-bin is already the newest version (6.5+20250216-2). dh-autoreconf is already the newest version (21). dh-autoreconf set to manually installed. readline-common is already the newest version (8.3-3). readline-common set to manually installed. libmpc3 is already the newest version (1.3.1-2). libmpc3 set to manually installed. base-passwd is already the newest version (3.6.7). libdpkg-perl is already the newest version (1.22.21). libdpkg-perl set to manually installed. libsystemd0 is already the newest version (258.1-1). automake is already the newest version (1:1.18.1-2). automake set to manually installed. libjpeg62-turbo-dev is already the newest version (1:2.1.5-4). libjpeg62-turbo-dev set to manually installed. libreadline8t64 is already the newest version (8.3-3). libreadline8t64 set to manually installed. libnghttp2-14 is already the newest version (1.64.0-1.1+b1). libnghttp2-14 set to manually installed. libc-dev-bin is already the newest version (2.41-12). libc-dev-bin set to manually installed. g++ is already the newest version (4:15.2.0-4). g++ set to manually installed. libgmpxx4ldbl is already the newest version (2:6.3.0+dfsg-5). libgmpxx4ldbl set to manually installed. groff-base is already the newest version (1.23.0-9). groff-base set to manually installed. cmake-data is already the newest version (4.1.1+really3.31.6-2). cmake-data set to manually installed. libjsoncpp26 is already the newest version (1.9.6-4). libjsoncpp26 set to manually installed. libcap2 is already the newest version (1:2.75-10+b1). build-essential is already the newest version (12.12). build-essential set to manually installed. libkadm5srv-mit12 is already the newest version (1.21.3-5). libkadm5srv-mit12 set to manually installed. libkrb5-dev is already the newest version (1.21.3-5). libkrb5-dev set to manually installed. libngtcp2-crypto-ossl0 is already the newest version (1.16.0-1). libngtcp2-crypto-ossl0 set to manually installed. libgmp-dev is already the newest version (2:6.3.0+dfsg-5). libgmp-dev set to manually installed. libkrb5-3 is already the newest version (1.21.3-5). libkrb5-3 set to manually installed. libcrypt1 is already the newest version (1:4.4.38-1). libssl3t64 is already the newest version (3.5.4-1). cpp-15 is already the newest version (15.2.0-4). cpp-15 set to manually installed. libcurl4-openssl-dev is already the newest version (8.16.0-4). libcurl4-openssl-dev set to manually installed. diffutils is already the newest version (1:3.10-4). comerr-dev is already the newest version (2.1-1.47.2-3+b3). comerr-dev set to manually installed. libmpfr6 is already the newest version (4.2.2-2). libmpfr6 set to manually installed. libstdc++-15-dev is already the newest version (15.2.0-4). libstdc++-15-dev set to manually installed. libzstd1 is already the newest version (1.5.7+dfsg-2). pkgconf is already the newest version (1.8.1-4). pkgconf set to manually installed. liblz4-1 is already the newest version (1.10.0-4). liblz4-1 set to manually installed. libdb5.3t64 is already the newest version (5.3.28+dfsg2-10). libc-bin is already the newest version (2.41-12). cpp-aarch64-linux-gnu is already the newest version (4:15.2.0-4). cpp-aarch64-linux-gnu set to manually installed. libmagic-mgc is already the newest version (1:5.46-5). libmagic-mgc set to manually installed. libldap-dev is already the newest version (2.6.10+dfsg-1). libldap-dev set to manually installed. libhdf5-hl-cpp-310 is already the newest version (1.14.5+repack-4). libhdf5-hl-cpp-310 set to manually installed. libngtcp2-dev is already the newest version (1.16.0-1). libngtcp2-dev set to manually installed. libaudit-common is already the newest version (1:4.1.2-1). libhdf5-cpp-310 is already the newest version (1.14.5+repack-4). libhdf5-cpp-310 set to manually installed. libuuid1 is already the newest version (2.41.2-4). ncurses-base is already the newest version (6.5+20250216-2). libubsan1 is already the newest version (15.2.0-4). libubsan1 set to manually installed. gettext-base is already the newest version (0.23.1-2+b1). gettext-base set to manually installed. krb5-multidev is already the newest version (1.21.3-5). krb5-multidev set to manually installed. coreutils is already the newest version (9.7-3). libkdb5-10t64 is already the newest version (1.21.3-5). libkdb5-10t64 set to manually installed. libssl-dev is already the newest version (3.5.4-1). libssl-dev set to manually installed. libnettle8t64 is already the newest version (3.10.2-1). libnettle8t64 set to manually installed. libpam-runtime is already the newest version (1.7.0-5). bzip2 is already the newest version (1.0.8-6). bzip2 set to manually installed. libpcre2-8-0 is already the newest version (10.46-1). dpkg-dev is already the newest version (1.22.21). dpkg-dev set to manually installed. libunbound8 is already the newest version (1.24.0-2). libunbound8 set to manually installed. libc6-dev is already the newest version (2.41-12). libc6-dev set to manually installed. gcc-aarch64-linux-gnu is already the newest version (4:15.2.0-4). gcc-aarch64-linux-gnu set to manually installed. libdebhelper-perl is already the newest version (13.28). libdebhelper-perl set to manually installed. libseccomp2 is already the newest version (2.6.0-2). libseccomp2 set to manually installed. init-system-helpers is already the newest version (1.69). sensible-utils is already the newest version (0.0.26). sensible-utils set to manually installed. libhdf5-310 is already the newest version (1.14.5+repack-4). libhdf5-310 set to manually installed. sysvinit-utils is already the newest version (3.14-4). libmd0 is already the newest version (1.1.0-2+b1). libtinfo6 is already the newest version (6.5+20250216-2). libnghttp3-9 is already the newest version (1.12.0-1). libnghttp3-9 set to manually installed. libssh2-1t64 is already the newest version (1.11.1-1). libssh2-1t64 set to manually installed. libtsan2 is already the newest version (15.2.0-4). libtsan2 set to manually installed. hostname is already the newest version (3.25). libcom-err2 is already the newest version (1.47.2-3+b3). libcom-err2 set to manually installed. g++-aarch64-linux-gnu is already the newest version (4:15.2.0-4). g++-aarch64-linux-gnu set to manually installed. libgcc-s1 is already the newest version (15.2.0-4). gcc-15-aarch64-linux-gnu is already the newest version (15.2.0-4). gcc-15-aarch64-linux-gnu set to manually installed. gcc-15-base is already the newest version (15.2.0-4). libboost-dev is already the newest version (1.83.0.2+b2). libboost-dev set to manually installed. autotools-dev is already the newest version (20240727.1). autotools-dev set to manually installed. dash is already the newest version (0.5.12-12). gcc-15 is already the newest version (15.2.0-4). gcc-15 set to manually installed. libhdf5-hl-fortran-310 is already the newest version (1.14.5+repack-4). libhdf5-hl-fortran-310 set to manually installed. libpsl-dev is already the newest version (0.21.2-1.1+b1). libpsl-dev set to manually installed. mawk is already the newest version (1.3.4.20250131-1). dpkg is already the newest version (1.22.21). gettext is already the newest version (0.23.1-2+b1). gettext set to manually installed. cmake is already the newest version (4.1.1+really3.31.6-2). cmake set to manually installed. libatomic1 is already the newest version (15.2.0-4). libatomic1 set to manually installed. libgcc-15-dev is already the newest version (15.2.0-4). libgcc-15-dev set to manually installed. hdf5-helpers is already the newest version (1.14.5+repack-4). hdf5-helpers set to manually installed. libbrotli1 is already the newest version (1.1.0-2+b7). libbrotli1 set to manually installed. linux-libc-dev is already the newest version (6.16.12-1). linux-libc-dev set to manually installed. libpam-modules is already the newest version (1.7.0-5). libcap-ng0 is already the newest version (0.8.5-4+b1). libgmp10 is already the newest version (2:6.3.0+dfsg-5). libcppunit-dev is already the newest version (1.15.1-4+b2). libcppunit-dev set to manually installed. libhdf5-fortran-310 is already the newest version (1.14.5+repack-4). libhdf5-fortran-310 set to manually installed. bsdextrautils is already the newest version (2.41.2-4). bsdextrautils set to manually installed. libcrypt-dev is already the newest version (1:4.4.38-1). libcrypt-dev set to manually installed. bash is already the newest version (5.3-1). autoconf is already the newest version (2.72-3.1). autoconf set to manually installed. libtasn1-6 is already the newest version (4.20.0-2). libtasn1-6 set to manually installed. libudev1 is already the newest version (258.1-1). libarchive-zip-perl is already the newest version (1.68-1). libarchive-zip-perl set to manually installed. libgdbm6t64 is already the newest version (1.26-1). libgdbm6t64 set to manually installed. libuchardet0 is already the newest version (0.0.8-2). libuchardet0 set to manually installed. libjpeg-dev is already the newest version (1:2.1.5-4). libjpeg-dev set to manually installed. libpam-modules-bin is already the newest version (1.7.0-5). libsasl2-modules-db is already the newest version (2.1.28+dfsg1-10). libsasl2-modules-db set to manually installed. libsz2 is already the newest version (1.1.4-2). libsz2 set to manually installed. libp11-kit-dev is already the newest version (0.25.9-2). libp11-kit-dev set to manually installed. libssh2-1-dev is already the newest version (1.11.1-1). libssh2-1-dev set to manually installed. libattr1 is already the newest version (1:2.5.2-3). libkrb5support0 is already the newest version (1.21.3-5). libkrb5support0 set to manually installed. liblzma5 is already the newest version (5.8.1-2). libctf-nobfd0 is already the newest version (2.45-7). libctf-nobfd0 set to manually installed. m4 is already the newest version (1.4.20-2). m4 set to manually installed. libgprofng0 is already the newest version (2.45-7). libgprofng0 set to manually installed. libbrotli-dev is already the newest version (1.1.0-2+b7). libbrotli-dev set to manually installed. gcc is already the newest version (4:15.2.0-4). gcc set to manually installed. librtmp1 is already the newest version (2.4+20151223.gitfa8646d.1-3). librtmp1 set to manually installed. libmagic1t64 is already the newest version (1:5.46-5). libmagic1t64 set to manually installed. libzstd-dev is already the newest version (1.5.7+dfsg-2). libzstd-dev set to manually installed. tar is already the newest version (1.35+dfsg-3.1). libidn2-0 is already the newest version (2.3.8-4). libidn2-0 set to manually installed. libnghttp3-dev is already the newest version (1.12.0-1). libnghttp3-dev set to manually installed. libpam0g is already the newest version (1.7.0-5). libbinutils is already the newest version (2.45-7). libbinutils set to manually installed. libsasl2-2 is already the newest version (2.1.28+dfsg1-10). libsasl2-2 set to manually installed. libasan8 is already the newest version (15.2.0-4). libasan8 set to manually installed. libk5crypto3 is already the newest version (1.21.3-5). libk5crypto3 set to manually installed. libp11-kit0 is already the newest version (0.25.9-2). libp11-kit0 set to manually installed. libgcc-14-dev is already the newest version (14.3.0-8). libgcc-14-dev set to manually installed. libpipeline1 is already the newest version (1.5.8-1). libpipeline1 set to manually installed. libcc1-0 is already the newest version (15.2.0-4). libcc1-0 set to manually installed. man-db is already the newest version (2.13.1-1). man-db set to manually installed. libcppunit-1.15-0 is already the newest version (1.15.1-4+b2). libcppunit-1.15-0 set to manually installed. g++-15 is already the newest version (15.2.0-4). g++-15 set to manually installed. binutils-aarch64-linux-gnu is already the newest version (2.45-7). binutils-aarch64-linux-gnu set to manually installed. libngtcp2-16 is already the newest version (1.16.0-1). libngtcp2-16 set to manually installed. libgnutls-openssl27t64 is already the newest version (3.8.10-2). libgnutls-openssl27t64 set to manually installed. libuv1t64 is already the newest version (1.51.0-2). libuv1t64 set to manually installed. libkeyutils1 is already the newest version (1.6.3-6). libkeyutils1 set to manually installed. autopoint is already the newest version (0.23.1-2). autopoint set to manually installed. libctf0 is already the newest version (2.45-7). libctf0 set to manually installed. findutils is already the newest version (4.10.0-3). libgdbm-compat4t64 is already the newest version (1.26-1). libgdbm-compat4t64 set to manually installed. libcurl4t64 is already the newest version (8.16.0-4). libcurl4t64 set to manually installed. libgomp1 is already the newest version (15.2.0-4). libgomp1 set to manually installed. dh-strip-nondeterminism is already the newest version (1.15.0-1). dh-strip-nondeterminism set to manually installed. libpsl5t64 is already the newest version (0.21.2-1.1+b1). libpsl5t64 set to manually installed. debconf is already the newest version (1.5.91). libexpat1 is already the newest version (2.7.3-1). libexpat1 set to manually installed. file is already the newest version (1:5.46-5). file set to manually installed. libstdc++-14-dev is already the newest version (14.3.0-8). libstdc++-14-dev set to manually installed. libblkid1 is already the newest version (2.41.2-4). libfile-stripnondeterminism-perl is already the newest version (1.15.0-1). libfile-stripnondeterminism-perl set to manually installed. debianutils is already the newest version (5.23.2). libunistring5 is already the newest version (1.3-2). libunistring5 set to manually installed. openssl-provider-legacy is already the newest version (3.5.4-1). libacl1 is already the newest version (2.3.2-2+b1). grep is already the newest version (3.12-1). libldap2 is already the newest version (2.6.10+dfsg-1). libldap2 set to manually installed. libaec0 is already the newest version (1.1.4-2). libaec0 set to manually installed. libevent-2.1-7t64 is already the newest version (2.1.12-stable-10+b1). libevent-2.1-7t64 set to manually installed. libhwasan0 is already the newest version (15.2.0-4). libhwasan0 set to manually installed. liblsan0 is already the newest version (15.2.0-4). liblsan0 set to manually installed. gcc-14-base is already the newest version (14.3.0-8). gcc-14-base set to manually installed. libgssapi-krb5-2 is already the newest version (1.21.3-5). libgssapi-krb5-2 set to manually installed. libstdc++6 is already the newest version (15.2.0-4). libstdc++6 set to manually installed. g++-15-aarch64-linux-gnu is already the newest version (15.2.0-4). g++-15-aarch64-linux-gnu set to manually installed. libperl5.40 is already the newest version (5.40.1-6). libperl5.40 set to manually installed. libgnutls-dane0t64 is already the newest version (3.8.10-2). libgnutls-dane0t64 set to manually installed. libtasn1-6-dev is already the newest version (4.20.0-2). libtasn1-6-dev set to manually installed. zlib1g-dev is already the newest version (1:1.3.dfsg+really1.3.1-1+b1). zlib1g-dev set to manually installed. make is already the newest version (4.4.1-2). make set to manually installed. libaec-dev is already the newest version (1.1.4-2). libaec-dev set to manually installed. libgnutls30t64 is already the newest version (3.8.10-2). libgnutls30t64 set to manually installed. libtool is already the newest version (2.5.4-5). libtool set to manually installed. cpp-15-aarch64-linux-gnu is already the newest version (15.2.0-4). cpp-15-aarch64-linux-gnu set to manually installed. libbz2-1.0 is already the newest version (1.0.8-6). libc6 is already the newest version (2.41-12). libhdf5-hl-310 is already the newest version (1.14.5+repack-4). libhdf5-hl-310 set to manually installed. libitm1 is already the newest version (15.2.0-4). libitm1 set to manually installed. libelf1t64 is already the newest version (0.193-3). libelf1t64 set to manually installed. libncursesw6 is already the newest version (6.5+20250216-2). libncursesw6 set to manually installed. sed is already the newest version (4.9-2+b1). binutils-common is already the newest version (2.45-7). binutils-common set to manually installed. patch is already the newest version (2.8-2). patch set to manually installed. procps is already the newest version (2:4.0.4-9). procps set to manually installed. perl is already the newest version (5.40.1-6). perl set to manually installed. nettle-dev is already the newest version (3.10.2-1). nettle-dev set to manually installed. rpcsvc-proto is already the newest version (1.4.3-1+b1). rpcsvc-proto set to manually installed. libboost1.83-dev is already the newest version (1.83.0-5). libboost1.83-dev set to manually installed. libxml2-16 is already the newest version (2.14.6+dfsg-0.1). libxml2-16 set to manually installed. libhogweed6t64 is already the newest version (3.10.2-1). libhogweed6t64 set to manually installed. libproc2-0 is already the newest version (2:4.0.4-9). libproc2-0 set to manually installed. libffi8 is already the newest version (3.5.2-2). libffi8 set to manually installed. libnghttp2-dev is already the newest version (1.64.0-1.1+b1). libnghttp2-dev set to manually installed. libisl23 is already the newest version (0.27-1). libisl23 set to manually installed. libmount1 is already the newest version (2.41.2-4). base-files is already the newest version (14). libkadm5clnt-mit12 is already the newest version (1.21.3-5). libkadm5clnt-mit12 set to manually installed. dwz is already the newest version (0.16-2). dwz set to manually installed. binutils is already the newest version (2.45-7). binutils set to manually installed. intltool-debian is already the newest version (0.35.0+20060710.6). intltool-debian set to manually installed. perl-modules-5.40 is already the newest version (5.40.1-6). perl-modules-5.40 set to manually installed. po-debconf is already the newest version (1.0.21+nmu1). po-debconf set to manually installed. libdebconfclient0 is already the newest version (0.280). libjansson4 is already the newest version (2.14-2+b3). libjansson4 set to manually installed. libselinux1 is already the newest version (3.8.1-1). perl-base is already the newest version (5.40.1-6). util-linux is already the newest version (2.41.2-4). gzip is already the newest version (1.13-1). libaudit1 is already the newest version (1:4.1.2-1). libgfortran5 is already the newest version (15.2.0-4). libgfortran5 set to manually installed. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: running --customize-hook in shell: sh -c 'chroot "$1" dpkg -r debootsnap-dummy' exec /srv/rebuilderd/tmp/mmdebstrap.520jXSrCCM (Reading database ... 37531 files and directories currently installed.) Removing debootsnap-dummy (1.0) ... I: running --customize-hook in shell: sh -c 'chroot "$1" dpkg-query --showformat '${binary:Package}=${Version}\n' --show > "$1/pkglist"' exec /srv/rebuilderd/tmp/mmdebstrap.520jXSrCCM I: running special hook: download /pkglist ./pkglist I: running --customize-hook in shell: sh -c 'rm "$1/pkglist"' exec /srv/rebuilderd/tmp/mmdebstrap.520jXSrCCM I: running special hook: upload sources.list /etc/apt/sources.list I: waiting for background processes to finish... I: cleaning package lists and apt cache... I: skipping cleanup/reproducible as requested I: creating tarball... I: done I: removing tempdir /srv/rebuilderd/tmp/mmdebstrap.520jXSrCCM... I: success in 59.0683 seconds Downloading dependency 131 of 235: libssh2-1-dev:arm64=1.11.1-1 Downloading dependency 132 of 235: libattr1:arm64=1:2.5.2-3 Downloading dependency 133 of 235: libkrb5support0:arm64=1.21.3-5 Downloading dependency 134 of 235: liblzma5:arm64=5.8.1-2 Downloading dependency 135 of 235: libctf-nobfd0:arm64=2.45-7 Downloading dependency 136 of 235: m4:arm64=1.4.20-2 Downloading dependency 137 of 235: libgprofng0:arm64=2.45-7 Downloading dependency 138 of 235: libbrotli-dev:arm64=1.1.0-2+b7 Downloading dependency 139 of 235: gcc:arm64=4:15.2.0-4 Downloading dependency 140 of 235: librtmp1:arm64=2.4+20151223.gitfa8646d.1-3 Downloading dependency 141 of 235: libmagic1t64:arm64=1:5.46-5 Downloading dependency 142 of 235: libzstd-dev:arm64=1.5.7+dfsg-2 Downloading dependency 143 of 235: tar:arm64=1.35+dfsg-3.1 Downloading dependency 144 of 235: libidn2-0:arm64=2.3.8-4 Downloading dependency 145 of 235: libnghttp3-dev:arm64=1.12.0-1 Downloading dependency 146 of 235: libpam0g:arm64=1.7.0-5 Downloading dependency 147 of 235: libbinutils:arm64=2.45-7 Downloading dependency 148 of 235: libsasl2-2:arm64=2.1.28+dfsg1-10 Downloading dependency 149 of 235: libasan8:arm64=15.2.0-4 Downloading dependency 150 of 235: libk5crypto3:arm64=1.21.3-5 Downloading dependency 151 of 235: libp11-kit0:arm64=0.25.9-2 Downloading dependency 152 of 235: libgcc-14-dev:arm64=14.3.0-8 Downloading dependency 153 of 235: libpipeline1:arm64=1.5.8-1 Downloading dependency 154 of 235: libcc1-0:arm64=15.2.0-4 Downloading dependency 155 of 235: man-db:arm64=2.13.1-1 Downloading dependency 156 of 235: libcppunit-1.15-0:arm64=1.15.1-4+b2 Downloading dependency 157 of 235: g++-15:arm64=15.2.0-4 Downloading dependency 158 of 235: binutils-aarch64-linux-gnu:arm64=2.45-7 Downloading dependency 159 of 235: libngtcp2-16:arm64=1.16.0-1 Downloading dependency 160 of 235: libgnutls-openssl27t64:arm64=3.8.10-2 Downloading dependency 161 of 235: libuv1t64:arm64=1.51.0-2 Downloading dependency 162 of 235: libkeyutils1:arm64=1.6.3-6 Downloading dependency 163 of 235: autopoint:arm64=0.23.1-2 Downloading dependency 164 of 235: libctf0:arm64=2.45-7 Downloading dependency 165 of 235: findutils:arm64=4.10.0-3 Downloading dependency 166 of 235: libgdbm-compat4t64:arm64=1.26-1 Downloading dependency 167 of 235: libcurl4t64:arm64=8.16.0-4 Downloading dependency 168 of 235: libgomp1:arm64=15.2.0-4 Downloading dependency 169 of 235: dh-strip-nondeterminism:arm64=1.15.0-1 Downloading dependency 170 of 235: libpsl5t64:arm64=0.21.2-1.1+b1 Downloading dependency 171 of 235: debconf:arm64=1.5.91 Downloading dependency 172 of 235: libexpat1:arm64=2.7.3-1 Downloading dependency 173 of 235: file:arm64=1:5.46-5 Downloading dependency 174 of 235: libstdc++-14-dev:arm64=14.3.0-8 Downloading dependency 175 of 235: libblkid1:arm64=2.41.2-4 Downloading dependency 176 of 235: libfile-stripnondeterminism-perl:arm64=1.15.0-1 Downloading dependency 177 of 235: debianutils:arm64=5.23.2 Downloading dependency 178 of 235: libunistring5:arm64=1.3-2 Downloading dependency 179 of 235: openssl-provider-legacy:arm64=3.5.4-1 Downloading dependency 180 of 235: libacl1:arm64=2.3.2-2+b1 Downloading dependency 181 of 235: grep:arm64=3.12-1 Downloading dependency 182 of 235: libldap2:arm64=2.6.10+dfsg-1 Downloading dependency 183 of 235: libaec0:arm64=1.1.4-2 Downloading dependency 184 of 235: libevent-2.1-7t64:arm64=2.1.12-stable-10+b1 Downloading dependency 185 of 235: libhwasan0:arm64=15.2.0-4 Downloading dependency 186 of 235: liblsan0:arm64=15.2.0-4 Downloading dependency 187 of 235: gcc-14-base:arm64=14.3.0-8 Downloading dependency 188 of 235: libgssapi-krb5-2:arm64=1.21.3-5 Downloading dependency 189 of 235: libstdc++6:arm64=15.2.0-4 Downloading dependency 190 of 235: g++-15-aarch64-linux-gnu:arm64=15.2.0-4 Downloading dependency 191 of 235: libperl5.40:arm64=5.40.1-6 Downloading dependency 192 of 235: libgnutls-dane0t64:arm64=3.8.10-2 Downloading dependency 193 of 235: libtasn1-6-dev:arm64=4.20.0-2 Downloading dependency 194 of 235: zlib1g-dev:arm64=1:1.3.dfsg+really1.3.1-1+b1 Downloading dependency 195 of 235: make:arm64=4.4.1-2 Downloading dependency 196 of 235: libaec-dev:arm64=1.1.4-2 Downloading dependency 197 of 235: libgnutls30t64:arm64=3.8.10-2 Downloading dependency 198 of 235: libtool:arm64=2.5.4-5 Downloading dependency 199 of 235: cpp-15-aarch64-linux-gnu:arm64=15.2.0-4 Downloading dependency 200 of 235: libbz2-1.0:arm64=1.0.8-6 Downloading dependency 201 of 235: libc6:arm64=2.41-12 Downloading dependency 202 of 235: libhdf5-hl-310:arm64=1.14.5+repack-4 Downloading dependency 203 of 235: libitm1:arm64=15.2.0-4 Downloading dependency 204 of 235: libelf1t64:arm64=0.193-3 Downloading dependency 205 of 235: libncursesw6:arm64=6.5+20250216-2 Downloading dependency 206 of 235: sed:arm64=4.9-2+b1 Downloading dependency 207 of 235: binutils-common:arm64=2.45-7 Downloading dependency 208 of 235: patch:arm64=2.8-2 Downloading dependency 209 of 235: procps:arm64=2:4.0.4-9 Downloading dependency 210 of 235: perl:arm64=5.40.1-6 Downloading dependency 211 of 235: nettle-dev:arm64=3.10.2-1 Downloading dependency 212 of 235: rpcsvc-proto:arm64=1.4.3-1+b1 Downloading dependency 213 of 235: libboost1.83-dev:arm64=1.83.0-5 Downloading dependency 214 of 235: libxml2-16:arm64=2.14.6+dfsg-0.1 Downloading dependency 215 of 235: libhogweed6t64:arm64=3.10.2-1 Downloading dependency 216 of 235: libproc2-0:arm64=2:4.0.4-9 Downloading dependency 217 of 235: libffi8:arm64=3.5.2-2 Downloading dependency 218 of 235: libnghttp2-dev:arm64=1.64.0-1.1+b1 Downloading dependency 219 of 235: libisl23:arm64=0.27-1 Downloading dependency 220 of 235: libmount1:arm64=2.41.2-4 Downloading dependency 221 of 235: base-files:arm64=14 Downloading dependency 222 of 235: libkadm5clnt-mit12:arm64=1.21.3-5 Downloading dependency 223 of 235: dwz:arm64=0.16-2 Downloading dependency 224 of 235: binutils:arm64=2.45-7 Downloading dependency 225 of 235: intltool-debian:arm64=0.35.0+20060710.6 Downloading dependency 226 of 235: perl-modules-5.40:arm64=5.40.1-6 Downloading dependency 227 of 235: po-debconf:arm64=1.0.21+nmu1 Downloading dependency 228 of 235: libdebconfclient0:arm64=0.280 Downloading dependency 229 of 235: libjansson4:arm64=2.14-2+b3 Downloading dependency 230 of 235: libselinux1:arm64=3.8.1-1 Downloading dependency 231 of 235: perl-base:arm64=5.40.1-6 Downloading dependency 232 of 235: util-linux:arm64=2.41.2-4 Downloading dependency 233 of 235: gzip:arm64=1.13-1 Downloading dependency 234 of 235: libaudit1:arm64=1:4.1.2-1 Downloading dependency 235 of 235: libgfortran5:arm64=15.2.0-4 env --chdir=/srv/rebuilderd/tmp/rebuilderdFiyda4/out DEB_BUILD_OPTIONS=parallel=8 LANG=C.UTF-8 LC_COLLATE=C.UTF-8 LC_CTYPE=C.UTF-8 SOURCE_DATE_EPOCH=1760820315 SBUILD_CONFIG=/srv/rebuilderd/tmp/debrebuild0yDHqB/debrebuild.sbuildrc.0YY3WOQliprW sbuild --build=arm64 --host=arm64 --no-source --arch-any --no-arch-all --chroot=/srv/rebuilderd/tmp/debrebuild0yDHqB/debrebuild.tar.WyB4ks5t1_0X --chroot-mode=unshare --dist=unstable --no-run-lintian --no-run-piuparts --no-run-autopkgtest --no-apt-update --no-apt-upgrade --no-apt-distupgrade --verbose --nolog --bd-uninstallable-explainer= --build-path=/build/reproducible-path --dsc-dir=mapsembler2-2.2.4+dfsg1 /srv/rebuilderd/tmp/rebuilderdFiyda4/inputs/mapsembler2_2.2.4+dfsg1-5.dsc I: consider moving your ~/.sbuildrc to /srv/rebuilderd/.config/sbuild/config.pl The Debian buildds switched to the "unshare" backend and sbuild will default to it in the future. To start using "unshare" add this to your `~/.config/sbuild/config.pl`: $chroot_mode = "unshare"; If you want to keep the old "schroot" mode even in the future, add the following to your `~/.config/sbuild/config.pl`: $chroot_mode = "schroot"; $schroot = "schroot"; sbuild (Debian sbuild) 0.89.3+deb13u1 (16 August 2025) on codethink02-arm64 +==============================================================================+ | mapsembler2 2.2.4+dfsg1-5 (arm64) Sat, 29 Nov 2025 11:23:02 +0000 | +==============================================================================+ Package: mapsembler2 Version: 2.2.4+dfsg1-5 Source Version: 2.2.4+dfsg1-5 Distribution: unstable Machine Architecture: arm64 Host Architecture: arm64 Build Architecture: arm64 Build Type: any I: No tarballs found in /srv/rebuilderd/.cache/sbuild I: Unpacking /srv/rebuilderd/tmp/debrebuild0yDHqB/debrebuild.tar.WyB4ks5t1_0X to /srv/rebuilderd/tmp/tmp.sbuild.8XPhc322cs... I: Setting up the chroot... I: Creating chroot session... I: Setting up log color... I: Setting up apt archive... +------------------------------------------------------------------------------+ | Fetch source files Sat, 29 Nov 2025 11:23:12 +0000 | +------------------------------------------------------------------------------+ Local sources ------------- /srv/rebuilderd/tmp/rebuilderdFiyda4/inputs/mapsembler2_2.2.4+dfsg1-5.dsc exists in /srv/rebuilderd/tmp/rebuilderdFiyda4/inputs; copying to chroot +------------------------------------------------------------------------------+ | Install package build dependencies Sat, 29 Nov 2025 11:23:14 +0000 | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), cmake, bc, zlib1g-dev, libhdf5-dev, libcppunit-dev, libboost-dev, build-essential Filtered Build-Depends: debhelper-compat (= 13), cmake, bc, zlib1g-dev, libhdf5-dev, libcppunit-dev, libboost-dev, build-essential dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/build/reproducible-path/resolver-fD75rk/apt_archive/sbuild-build-depends-main-dummy.deb'. Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies +------------------------------------------------------------------------------+ | Check architectures Sat, 29 Nov 2025 11:23:21 +0000 | +------------------------------------------------------------------------------+ Arch check ok (arm64 included in amd64 arm64 kfreebsd-amd64 ppc64el s390x) +------------------------------------------------------------------------------+ | Build environment Sat, 29 Nov 2025 11:23:22 +0000 | +------------------------------------------------------------------------------+ Kernel: Linux 6.12.57+deb13-cloud-arm64 #1 SMP Debian 6.12.57-1 (2025-11-05) arm64 (aarch64) Toolchain package versions: binutils_2.45-7 dpkg-dev_1.22.21 g++-15_15.2.0-4 gcc-15_15.2.0-4 libc6-dev_2.41-12 libstdc++-14-dev_14.3.0-8 libstdc++-15-dev_15.2.0-4 libstdc++6_15.2.0-4 linux-libc-dev_6.16.12-1 Package versions: autoconf_2.72-3.1 automake_1:1.18.1-2 autopoint_0.23.1-2 autotools-dev_20240727.1 base-files_14 base-passwd_3.6.7 bash_5.3-1 bc_1.07.1-4+b1 binutils_2.45-7 binutils-aarch64-linux-gnu_2.45-7 binutils-common_2.45-7 bsdextrautils_2.41.2-4 build-essential_12.12 bzip2_1.0.8-6 cmake_4.1.1+really3.31.6-2 cmake-data_4.1.1+really3.31.6-2 comerr-dev_2.1-1.47.2-3+b3 coreutils_9.7-3 cpp_4:15.2.0-4 cpp-15_15.2.0-4 cpp-15-aarch64-linux-gnu_15.2.0-4 cpp-aarch64-linux-gnu_4:15.2.0-4 dash_0.5.12-12 debconf_1.5.91 debhelper_13.28 debianutils_5.23.2 dh-autoreconf_21 dh-strip-nondeterminism_1.15.0-1 diffutils_1:3.10-4 dpkg_1.22.21 dpkg-dev_1.22.21 dwz_0.16-2 file_1:5.46-5 findutils_4.10.0-3 g++_4:15.2.0-4 g++-15_15.2.0-4 g++-15-aarch64-linux-gnu_15.2.0-4 g++-aarch64-linux-gnu_4:15.2.0-4 gcc_4:15.2.0-4 gcc-14-base_14.3.0-8 gcc-15_15.2.0-4 gcc-15-aarch64-linux-gnu_15.2.0-4 gcc-15-base_15.2.0-4 gcc-aarch64-linux-gnu_4:15.2.0-4 gettext_0.23.1-2+b1 gettext-base_0.23.1-2+b1 grep_3.12-1 groff-base_1.23.0-9 gzip_1.13-1 hdf5-helpers_1.14.5+repack-4 hostname_3.25 init-system-helpers_1.69 intltool-debian_0.35.0+20060710.6 krb5-multidev_1.21.3-5 libacl1_2.3.2-2+b1 libaec-dev_1.1.4-2 libaec0_1.1.4-2 libarchive-zip-perl_1.68-1 libarchive13t64_3.7.4-4+b1 libasan8_15.2.0-4 libatomic1_15.2.0-4 libattr1_1:2.5.2-3 libaudit-common_1:4.1.2-1 libaudit1_1:4.1.2-1 libbinutils_2.45-7 libblkid1_2.41.2-4 libboost-dev_1.83.0.2+b2 libboost1.83-dev_1.83.0-5 libbrotli-dev_1.1.0-2+b7 libbrotli1_1.1.0-2+b7 libbz2-1.0_1.0.8-6 libc-bin_2.41-12 libc-dev-bin_2.41-12 libc6_2.41-12 libc6-dev_2.41-12 libcap-ng0_0.8.5-4+b1 libcap2_1:2.75-10+b1 libcc1-0_15.2.0-4 libcom-err2_1.47.2-3+b3 libcppunit-1.15-0_1.15.1-4+b2 libcppunit-dev_1.15.1-4+b2 libcrypt-dev_1:4.4.38-1 libcrypt1_1:4.4.38-1 libctf-nobfd0_2.45-7 libctf0_2.45-7 libcurl4-openssl-dev_8.16.0-4 libcurl4t64_8.16.0-4 libdb5.3t64_5.3.28+dfsg2-10 libdebconfclient0_0.280 libdebhelper-perl_13.28 libdpkg-perl_1.22.21 libelf1t64_0.193-3 libevent-2.1-7t64_2.1.12-stable-10+b1 libexpat1_2.7.3-1 libffi8_3.5.2-2 libfile-stripnondeterminism-perl_1.15.0-1 libgcc-14-dev_14.3.0-8 libgcc-15-dev_15.2.0-4 libgcc-s1_15.2.0-4 libgdbm-compat4t64_1.26-1 libgdbm6t64_1.26-1 libgfortran5_15.2.0-4 libgmp-dev_2:6.3.0+dfsg-5 libgmp10_2:6.3.0+dfsg-5 libgmpxx4ldbl_2:6.3.0+dfsg-5 libgnutls-dane0t64_3.8.10-2 libgnutls-openssl27t64_3.8.10-2 libgnutls28-dev_3.8.10-2 libgnutls30t64_3.8.10-2 libgomp1_15.2.0-4 libgprofng0_2.45-7 libgssapi-krb5-2_1.21.3-5 libgssrpc4t64_1.21.3-5 libhdf5-310_1.14.5+repack-4 libhdf5-cpp-310_1.14.5+repack-4 libhdf5-dev_1.14.5+repack-4 libhdf5-fortran-310_1.14.5+repack-4 libhdf5-hl-310_1.14.5+repack-4 libhdf5-hl-cpp-310_1.14.5+repack-4 libhdf5-hl-fortran-310_1.14.5+repack-4 libhogweed6t64_3.10.2-1 libhwasan0_15.2.0-4 libidn2-0_2.3.8-4 libidn2-dev_2.3.8-4 libisl23_0.27-1 libitm1_15.2.0-4 libjansson4_2.14-2+b3 libjpeg-dev_1:2.1.5-4 libjpeg62-turbo_1:2.1.5-4 libjpeg62-turbo-dev_1:2.1.5-4 libjsoncpp26_1.9.6-4 libk5crypto3_1.21.3-5 libkadm5clnt-mit12_1.21.3-5 libkadm5srv-mit12_1.21.3-5 libkdb5-10t64_1.21.3-5 libkeyutils1_1.6.3-6 libkrb5-3_1.21.3-5 libkrb5-dev_1.21.3-5 libkrb5support0_1.21.3-5 libldap-dev_2.6.10+dfsg-1 libldap2_2.6.10+dfsg-1 liblsan0_15.2.0-4 liblz4-1_1.10.0-4 liblzma5_5.8.1-2 libmagic-mgc_1:5.46-5 libmagic1t64_1:5.46-5 libmd0_1.1.0-2+b1 libmount1_2.41.2-4 libmpc3_1.3.1-2 libmpfr6_4.2.2-2 libncursesw6_6.5+20250216-2 libnettle8t64_3.10.2-1 libnghttp2-14_1.64.0-1.1+b1 libnghttp2-dev_1.64.0-1.1+b1 libnghttp3-9_1.12.0-1 libnghttp3-dev_1.12.0-1 libngtcp2-16_1.16.0-1 libngtcp2-crypto-ossl-dev_1.16.0-1 libngtcp2-crypto-ossl0_1.16.0-1 libngtcp2-dev_1.16.0-1 libp11-kit-dev_0.25.9-2 libp11-kit0_0.25.9-2 libpam-modules_1.7.0-5 libpam-modules-bin_1.7.0-5 libpam-runtime_1.7.0-5 libpam0g_1.7.0-5 libpcre2-8-0_10.46-1 libperl5.40_5.40.1-6 libpipeline1_1.5.8-1 libpkgconf3_1.8.1-4 libproc2-0_2:4.0.4-9 libpsl-dev_0.21.2-1.1+b1 libpsl5t64_0.21.2-1.1+b1 libreadline8t64_8.3-3 librhash1_1.4.6-1 librtmp-dev_2.4+20151223.gitfa8646d.1-3 librtmp1_2.4+20151223.gitfa8646d.1-3 libsasl2-2_2.1.28+dfsg1-10 libsasl2-modules-db_2.1.28+dfsg1-10 libseccomp2_2.6.0-2 libselinux1_3.8.1-1 libsframe2_2.45-7 libsmartcols1_2.41.2-4 libssh2-1-dev_1.11.1-1 libssh2-1t64_1.11.1-1 libssl-dev_3.5.4-1 libssl3t64_3.5.4-1 libstdc++-14-dev_14.3.0-8 libstdc++-15-dev_15.2.0-4 libstdc++6_15.2.0-4 libsystemd0_258.1-1 libsz2_1.1.4-2 libtasn1-6_4.20.0-2 libtasn1-6-dev_4.20.0-2 libtinfo6_6.5+20250216-2 libtool_2.5.4-5 libtsan2_15.2.0-4 libubsan1_15.2.0-4 libuchardet0_0.0.8-2 libudev1_258.1-1 libunbound8_1.24.0-2 libunistring5_1.3-2 libuuid1_2.41.2-4 libuv1t64_1.51.0-2 libxml2-16_2.14.6+dfsg-0.1 libxxhash0_0.8.3-2 libzstd-dev_1.5.7+dfsg-2 libzstd1_1.5.7+dfsg-2 linux-libc-dev_6.16.12-1 m4_1.4.20-2 make_4.4.1-2 man-db_2.13.1-1 mawk_1.3.4.20250131-1 ncurses-base_6.5+20250216-2 ncurses-bin_6.5+20250216-2 nettle-dev_3.10.2-1 openssl-provider-legacy_3.5.4-1 patch_2.8-2 perl_5.40.1-6 perl-base_5.40.1-6 perl-modules-5.40_5.40.1-6 pkgconf_1.8.1-4 pkgconf-bin_1.8.1-4 po-debconf_1.0.21+nmu1 procps_2:4.0.4-9 readline-common_8.3-3 rpcsvc-proto_1.4.3-1+b1 sed_4.9-2+b1 sensible-utils_0.0.26 sysvinit-utils_3.14-4 tar_1.35+dfsg-3.1 util-linux_2.41.2-4 xz-utils_5.8.1-2 zlib1g_1:1.3.dfsg+really1.3.1-1+b1 zlib1g-dev_1:1.3.dfsg+really1.3.1-1+b1 +------------------------------------------------------------------------------+ | Build Sat, 29 Nov 2025 11:23:22 +0000 | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: mapsembler2 Binary: mapsembler2 Architecture: amd64 arm64 kfreebsd-amd64 ppc64el s390x Version: 2.2.4+dfsg1-5 Maintainer: Debian Med Packaging Team Uploaders: Olivier Sallou , Andreas Tille , Étienne Mollier , Homepage: http://colibread.inria.fr/mapsembler2/ Standards-Version: 4.7.2 Vcs-Browser: https://salsa.debian.org/med-team/mapsembler2 Vcs-Git: https://salsa.debian.org/med-team/mapsembler2.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), cmake, bc, zlib1g-dev, libhdf5-dev, libcppunit-dev, libboost-dev Package-List: mapsembler2 deb science optional arch=amd64,arm64,kfreebsd-amd64,ppc64el,s390x Checksums-Sha1: a9219b84bbe33544c2c239e148d2df5cd3593ba3 1369588 mapsembler2_2.2.4+dfsg1.orig.tar.xz b23534962e21d290749b47e8416c4c96e82c211a 24464 mapsembler2_2.2.4+dfsg1-5.debian.tar.xz Checksums-Sha256: 44b215f922ed34c3a167eb512012792e7d777df17d3dda6a2c4a5a0959e8b824 1369588 mapsembler2_2.2.4+dfsg1.orig.tar.xz c95261bce826d6105f291638779f3b41ae7e934ff684390dcc49fd58cea343be 24464 mapsembler2_2.2.4+dfsg1-5.debian.tar.xz Files: 5c9add3cf5d9cfbd1c340efe580408e2 1369588 mapsembler2_2.2.4+dfsg1.orig.tar.xz f30070cf3089f4dd1edf3b544145d313 24464 mapsembler2_2.2.4+dfsg1-5.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmjz/PkRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtFfZA//a4hmqLyk10r9LSA0gJNOD7amONnkvBex kv7UuodkDon8cnalflk1TqJMPljA4JLYbWExlKeCWex2F9duauYWw0vQI82B79vc BCaDI64vmYh7SumHkqrpeOAQsCgAPHRBn9yfWbLCz/uw3WZKRRCNN0TMGZdZSD/5 ruirw7sgITNSpeO3p9+oRWIqZV9SH62l+rOPsX7VdDwfLKEDs6jX+njh6/aAzU/Q UsO5/JjTQTTjW+s1WJYI5Qis2wMl9i79Hq/YfVe6n9h2rLoM6a5Yxr0oAI5645j8 IyHNz6jlrfGj8N4AM9aZyGzKfxqjisqSMSNoHsaplL6NXbLuQl+xsC40111Q/7aJ obSLlg5GEFDvp53Vrd3kL70KnJkKeoszQcs+V+1JLH8uUL++VHU+nqcDLFrFBCMC 4NKFmwYjMYrHJ1lu8Y40ijPxS4dWjuSzopOR67nPlKgba8e9KYKsept0pxFhoqVD M0YLJyoXFDOp907Y2awdJKSxHcNAZxbZqH4Gh5b56p/u/odHtBxTPn/zqSBg1UKl KiC3UzAcCZdd+mYpccSSO7ox/L6Y8C3e9HrTj1BiY8WRpZj8aVLOEkyp8HChbL4C 5AisGCYP44sGAjk+WXWpPPDRUJ5TEy0dG9aQEyI7AypIFIF9ADyWNBu27xtmjHNJ +vnl4ZehLlc= =YCPD -----END PGP SIGNATURE----- dpkg-source: warning: cannot verify inline signature for ./mapsembler2_2.2.4+dfsg1-5.dsc: unsupported subcommand dpkg-source: info: extracting mapsembler2 in /build/reproducible-path/mapsembler2-2.2.4+dfsg1 dpkg-source: info: unpacking mapsembler2_2.2.4+dfsg1.orig.tar.xz dpkg-source: info: unpacking mapsembler2_2.2.4+dfsg1-5.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying use_debian_libs dpkg-source: info: applying run_pipeline dpkg-source: info: applying add_hardening dpkg-source: info: applying skip_mphe dpkg-source: info: applying gcc-5.patch dpkg-source: info: applying libgomp.patch dpkg-source: info: applying spelling.patch dpkg-source: info: applying no_std_hash_redefinition.patch dpkg-source: info: applying gcc10.patch dpkg-source: info: applying check_memory.patch dpkg-source: info: applying cross.patch dpkg-source: info: applying gcc11.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=8 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LC_COLLATE=C.UTF-8 LC_CTYPE=C.UTF-8 LOGNAME=sbuild PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SHELL=/bin/sh SOURCE_DATE_EPOCH=1760820315 USER=sbuild dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -us -uc -B dpkg-buildpackage: info: source package mapsembler2 dpkg-buildpackage: info: source version 2.2.4+dfsg1-5 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean debian/rules override_dh_clean make[1]: Entering directory '/build/reproducible-path/mapsembler2-2.2.4+dfsg1' rm -rf mapsembler2_extremities/build cd mapsembler2_extend && make clean make[2]: Entering directory '/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extend' rm -rf *.o ../minia/*.o read_coherence_mapsembler/*.o make[2]: Leaving directory '/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extend' rm -f mapsembler2_extend/mapsembler_extend cd kissreads_graph && make clean make[2]: Entering directory '/build/reproducible-path/mapsembler2-2.2.4+dfsg1/kissreads_graph' rm -rf kissreads_graph *.o read_coherence_mapsembler/*.o ../minia/*.o make[2]: Leaving directory '/build/reproducible-path/mapsembler2-2.2.4+dfsg1/kissreads_graph' rm -f kissreads_graph/mapsembler2_kissreads_graph cd kissreads && make clean make[2]: Entering directory '/build/reproducible-path/mapsembler2-2.2.4+dfsg1/kissreads' rm -rf ./src/*.o kissreads make[2]: Leaving directory '/build/reproducible-path/mapsembler2-2.2.4+dfsg1/kissreads' rm -f kissreads/mapsembler2_kissreads dh_clean make[1]: Leaving directory '/build/reproducible-path/mapsembler2-2.2.4+dfsg1' debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/mapsembler2-2.2.4+dfsg1' dh_auto_configure -- -DCMAKE_POLICY_VERSION_MINIMUM=3.5 make[1]: Leaving directory '/build/reproducible-path/mapsembler2-2.2.4+dfsg1' debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/mapsembler2-2.2.4+dfsg1' dh_auto_configure --sourcedirectory=mapsembler2_extremities --builddirectory=mapsembler2_extremities/build cd mapsembler2_extremities/build && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/aarch64-linux-gnu .. CMake Warning (dev) at CMakeLists.txt:1 (project): cmake_minimum_required() should be called prior to this top-level project() call. Please see the cmake-commands(7) manual for usage documentation of both commands. This warning is for project developers. Use -Wno-dev to suppress it. -- The C compiler identification is GNU 15.2.0 -- The CXX compiler identification is GNU 15.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done CMake Deprecation Warning at CMakeLists.txt:3 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument value. Or, use the ... syntax to tell CMake that the project requires at least but has been updated to work with policies introduced by or earlier. CMake Deprecation Warning at cmake/FindTR1.cmake:10 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument value. Or, use the ... syntax to tell CMake that the project requires at least but has been updated to work with policies introduced by or earlier. Call Stack (most recent call first): CMakeLists.txt:26 (include) -- Performing Test SHARED_PTR_USE_TR1_MEMORY -- Performing Test SHARED_PTR_USE_TR1_MEMORY - Success -- Performing Test SHARED_PTR_USE_MEMORY -- Performing Test SHARED_PTR_USE_MEMORY - Success -- Performing Test UNORDERED_MAP_USE_TR1_UNORDERED_MAP -- Performing Test UNORDERED_MAP_USE_TR1_UNORDERED_MAP - Success -- Performing Test UNORDERED_MAP_USE_UNORDERED_MAP -- Performing Test UNORDERED_MAP_USE_UNORDERED_MAP - Success -- gatb-core is here '/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core' CMake Deprecation Warning at thirdparty/gatb-core/CMakeLists.txt:4 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument value. Or, use the ... syntax to tell CMake that the project requires at least but has been updated to work with policies introduced by or earlier. -- CppUnit: found headers (in /usr/include) but not the library... -- CppUnit NOT FOUND -- Found Perl: /usr/bin/perl (found version "5.40.1") -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of __uint128 -- Check size of __uint128 - failed CMake Warning (dev) at thirdparty/gatb-core/cmake/DefineInteger.cmake:11 (if): Policy CMP0054 is not set: Only interpret if() arguments as variables or keywords when unquoted. Run "cmake --help-policy CMP0054" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Quoted variables like "HAVE_int128_t_USE__uint128" will no longer be dereferenced when the policy is set to NEW. Since the policy is not set the OLD behavior will be used. Call Stack (most recent call first): thirdparty/gatb-core/cmake/DefineInteger.cmake:33 (Check_Int128) thirdparty/gatb-core/CMakeLists.txt:39 (DefineInteger) This warning is for project developers. Use -Wno-dev to suppress it. -- Check size of __uint128_t -- Check size of __uint128_t - done CMake Warning (dev) at thirdparty/gatb-core/cmake/DefineInteger.cmake:12 (if): Policy CMP0054 is not set: Only interpret if() arguments as variables or keywords when unquoted. Run "cmake --help-policy CMP0054" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Quoted variables like "int128_t_USE__uint128_t" will no longer be dereferenced when the policy is set to NEW. Since the policy is not set the OLD behavior will be used. Call Stack (most recent call first): thirdparty/gatb-core/cmake/DefineInteger.cmake:34 (Check_Int128) thirdparty/gatb-core/CMakeLists.txt:39 (DefineInteger) This warning is for project developers. Use -Wno-dev to suppress it. ------------------------------------------------------------------------------------- -- C++ EXTENSIONS WILL BE USED... ------------------------------------------------------------------------------------- -- Options: -O3 -DINT128_FOUND -DWITH_LAMBDA_EXPRESSION -std=c++0x -Wno-invalid-offsetof -- SUPPORTED KMER SIZES ARE 32 64 96 128 -- ---------- GATB TOOLS ---------- CMake Deprecation Warning at thirdparty/gatb-core/thirdparty/emphf/CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument value. Or, use the ... syntax to tell CMake that the project requires at least but has been updated to work with policies introduced by or earlier. CMake Warning (dev) at thirdparty/gatb-core/thirdparty/CMakeLists.txt:29 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at thirdparty/gatb-core/thirdparty/CMakeLists.txt:34 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at thirdparty/gatb-core/thirdparty/CMakeLists.txt:34 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at thirdparty/gatb-core/thirdparty/CMakeLists.txt:34 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at thirdparty/gatb-core/thirdparty/CMakeLists.txt:34 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at thirdparty/gatb-core/thirdparty/CMakeLists.txt:34 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at thirdparty/gatb-core/thirdparty/CMakeLists.txt:34 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at thirdparty/gatb-core/thirdparty/CMakeLists.txt:34 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at thirdparty/gatb-core/thirdparty/CMakeLists.txt:34 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at thirdparty/gatb-core/thirdparty/CMakeLists.txt:34 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at thirdparty/gatb-core/thirdparty/CMakeLists.txt:34 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at thirdparty/gatb-core/thirdparty/CMakeLists.txt:34 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at thirdparty/gatb-core/thirdparty/CMakeLists.txt:34 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at thirdparty/gatb-core/thirdparty/CMakeLists.txt:34 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at thirdparty/gatb-core/thirdparty/CMakeLists.txt:34 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at thirdparty/gatb-core/thirdparty/CMakeLists.txt:34 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at thirdparty/gatb-core/thirdparty/CMakeLists.txt:34 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at thirdparty/gatb-core/thirdparty/CMakeLists.txt:34 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at thirdparty/gatb-core/thirdparty/CMakeLists.txt:34 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at thirdparty/gatb-core/thirdparty/CMakeLists.txt:34 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at thirdparty/gatb-core/thirdparty/CMakeLists.txt:34 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at thirdparty/gatb-core/thirdparty/CMakeLists.txt:34 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at thirdparty/gatb-core/thirdparty/CMakeLists.txt:34 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at thirdparty/gatb-core/thirdparty/CMakeLists.txt:34 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at thirdparty/gatb-core/thirdparty/CMakeLists.txt:34 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. CMake Warning (dev) at thirdparty/gatb-core/thirdparty/CMakeLists.txt:34 (add_custom_command): Exactly one of PRE_BUILD, PRE_LINK, or POST_BUILD must be given. Assuming POST_BUILD to preserve backward compatibility. Policy CMP0175 is not set: add_custom_command() rejects invalid arguments. Run "cmake --help-policy CMP0175" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. -- Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE) -- ---------- GATB EXAMPLES ---------- -- Add compilation option -DUNORDERED_MAP_TR1_FOUND=1 -- Configuring done (4.3s) CMake Warning (dev) at thirdparty/gatb-core/CMakeLists.txt:221 (ADD_DEPENDENCIES): Policy CMP0046 is not set: Error on non-existent dependency in add_dependencies. Run "cmake --help-policy CMP0046" for policy details. Use the cmake_policy command to set the policy and suppress this warning. The dependency target "hdf5" of target "gatbcore-static" does not exist. This warning is for project developers. Use -Wno-dev to suppress it. -- Generating done (0.2s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build dh_auto_build --sourcedirectory=mapsembler2_extremities --builddirectory=mapsembler2_extremities/build cd mapsembler2_extremities/build && make -j8 INSTALL="install --strip-program=true" VERBOSE=1 make[2]: Entering directory '/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build' /usr/bin/cmake -S/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities -B/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/CMakeFiles /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build' make -f ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/build.make ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/depend make -f ext/gatb-core/thirdparty/CMakeFiles/emphf_copyasis.dir/build.make ext/gatb-core/thirdparty/CMakeFiles/emphf_copyasis.dir/depend make[4]: Entering directory '/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build' cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/thirdparty /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/thirdparty/CMakeFiles/emphf_copyasis.dir/DependInfo.cmake "--color=" make[4]: Entering directory '/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build' cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/src /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build' make -f ext/gatb-core/thirdparty/CMakeFiles/emphf_copyasis.dir/build.make ext/gatb-core/thirdparty/CMakeFiles/emphf_copyasis.dir/build make[4]: Entering directory '/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build' cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/thirdparty && /usr/bin/cmake -E make_directory /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include/None/emphf make[4]: Leaving directory '/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build' make -f ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/build.make ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/build make[4]: Entering directory '/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build' [ 3%] Building CXX object ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankRegistery.cpp.o cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/src && /usr/bin/c++ -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -DINT128_FOUND -DWITH_LAMBDA_EXPRESSION -std=c++0x -Wno-invalid-offsetof -MD -MT ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankRegistery.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankRegistery.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankRegistery.cpp.o -c /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/bank/impl/BankRegistery.cpp [ 6%] Building CXX object ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankBinary.cpp.o [ 6%] Building CXX object ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankAlbum.cpp.o [ 6%] Building CXX object ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankFasta.cpp.o [ 6%] Building CXX object ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankRandom.cpp.o [ 10%] Building CXX object ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankHelpers.cpp.o cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/src && /usr/bin/c++ -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -DINT128_FOUND -DWITH_LAMBDA_EXPRESSION -std=c++0x -Wno-invalid-offsetof -MD -MT ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankAlbum.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankAlbum.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankAlbum.cpp.o -c /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/bank/impl/BankAlbum.cpp cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/src && /usr/bin/c++ -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -DINT128_FOUND -DWITH_LAMBDA_EXPRESSION -std=c++0x -Wno-invalid-offsetof -MD -MT ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankFasta.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankFasta.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankFasta.cpp.o -c /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/bank/impl/BankFasta.cpp cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/src && /usr/bin/c++ -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -DINT128_FOUND -DWITH_LAMBDA_EXPRESSION -std=c++0x -Wno-invalid-offsetof -MD -MT ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankBinary.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankBinary.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankBinary.cpp.o -c /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/bank/impl/BankBinary.cpp cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/src && /usr/bin/c++ -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -DINT128_FOUND -DWITH_LAMBDA_EXPRESSION -std=c++0x -Wno-invalid-offsetof -MD -MT ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankHelpers.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankHelpers.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankHelpers.cpp.o -c /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/bank/impl/BankHelpers.cpp cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/src && /usr/bin/c++ -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -DINT128_FOUND -DWITH_LAMBDA_EXPRESSION -std=c++0x -Wno-invalid-offsetof -MD -MT ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankRandom.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankRandom.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankRandom.cpp.o -c /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/bank/impl/BankRandom.cpp cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty/emphf/base_hash.hpp /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include/None/emphf [ 13%] Building CXX object ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankConverterAlgorithm.cpp.o cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/src && /usr/bin/c++ -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -DINT128_FOUND -DWITH_LAMBDA_EXPRESSION -std=c++0x -Wno-invalid-offsetof -MD -MT ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankConverterAlgorithm.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankConverterAlgorithm.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankConverterAlgorithm.cpp.o -c /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/bank/impl/BankConverterAlgorithm.cpp cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty/emphf/bitpair_vector.hpp /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include/None/emphf cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty/emphf/bitstream.hpp /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include/None/emphf cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty/emphf/common.hpp /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include/None/emphf cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty/emphf/compute_mphf_generic.hpp /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include/None/emphf cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty/emphf/compute_mphf_hem.cpp /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include/None/emphf cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty/emphf/compute_mphf_scan.cpp /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include/None/emphf cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty/emphf/compute_mphf_scan_mmap.cpp /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include/None/emphf cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty/emphf/compute_mphf_seq.cpp /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include/None/emphf cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty/emphf/emphf_config.hpp /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include/None/emphf cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty/emphf/gen_synthetic_data.cpp /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include/None/emphf cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty/emphf/hypergraph.hpp /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include/None/emphf cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty/emphf/hypergraph_sorter_scan.hpp /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include/None/emphf cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty/emphf/hypergraph_sorter_seq.hpp /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include/None/emphf cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty/emphf/internal_memory_model.hpp /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include/None/emphf cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty/emphf/mmap_memory_model.hpp /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include/None/emphf cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty/emphf/mphf.hpp /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include/None/emphf cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty/emphf/mphf_hem.hpp /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include/None/emphf cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty/emphf/packed_edge_list.hpp /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include/None/emphf cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty/emphf/packed_vector.hpp /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include/None/emphf cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty/emphf/perfutils.hpp /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include/None/emphf cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty/emphf/ranked_bitpair_vector.hpp /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include/None/emphf In file included from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/system/impl/MemoryCommon.hpp:32, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/system/impl/System.hpp:31, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/misc/api/Data.hpp:32, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/bank/api/Sequence.hpp:31, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/bank/impl/AbstractBank.hpp:31, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/bank/impl/BankBinary.hpp:31, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/bank/impl/BankBinary.cpp:20: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/system/api/Exception.hpp: In constructor ‘gatb::core::system::ExceptionErrno::ExceptionErrno(const char*, ...)’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/system/api/Exception.hpp:126:24: warning: ignoring return value of ‘char* strerror_r(int, char*, size_t)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 126 | strerror_r (errno, buffer, BUFSIZ); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty/emphf/test_mphf.cpp /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include/None/emphf cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty/emphf/test_mphf_generic.hpp /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include/None/emphf cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/thirdparty && /usr/bin/cmake -E copy_if_different /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty/emphf/test_mphf_hem.cpp /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include/None/emphf make[4]: Leaving directory '/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build' [ 13%] Built target emphf_copyasis [ 13%] Building CXX object ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankSplitter.cpp.o cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/src && /usr/bin/c++ -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -DINT128_FOUND -DWITH_LAMBDA_EXPRESSION -std=c++0x -Wno-invalid-offsetof -MD -MT ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankSplitter.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankSplitter.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankSplitter.cpp.o -c /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/bank/impl/BankSplitter.cpp In file included from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5.hpp:35, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:33, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:471, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:466, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/bank/impl/BankConverterAlgorithm.hpp:33, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/bank/impl/BankConverterAlgorithm.cpp:20: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/IteratorFile.hpp: In member function ‘size_t gatb::core::tools::collections::impl::IteratorCountCompressedFile::fill(std::vector&, size_t)’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/IteratorFile.hpp:375:5: warning: no return statement in function returning non-void [-Wreturn-type] 375 | } | ^ [ 17%] Building CXX object ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/BranchingAlgorithm.cpp.o cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/src && /usr/bin/c++ -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -DINT128_FOUND -DWITH_LAMBDA_EXPRESSION -std=c++0x -Wno-invalid-offsetof -MD -MT ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/BranchingAlgorithm.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/BranchingAlgorithm.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/BranchingAlgorithm.cpp.o -c /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp In file included from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/system/impl/MemoryCommon.hpp:32, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/system/impl/System.hpp:31, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/misc/api/Data.hpp:32, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/bank/api/Sequence.hpp:31, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/bank/api/IBank.hpp:33, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/bank/impl/AbstractBank.hpp:31, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/bank/impl/BankFasta.hpp:32, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/bank/impl/BankFasta.cpp:20: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/system/api/Exception.hpp: In constructor ‘gatb::core::system::ExceptionErrno::ExceptionErrno(const char*, ...)’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/system/api/Exception.hpp:126:24: warning: ignoring return value of ‘char* strerror_r(int, char*, size_t)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 126 | strerror_r (errno, buffer, BUFSIZ); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ [ 17%] Building CXX object ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Frontline.cpp.o cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/src && /usr/bin/c++ -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -DINT128_FOUND -DWITH_LAMBDA_EXPRESSION -std=c++0x -Wno-invalid-offsetof -MD -MT ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Frontline.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Frontline.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Frontline.cpp.o -c /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/debruijn/impl/Frontline.cpp [ 20%] Building CXX object ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Graph.cpp.o cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/src && /usr/bin/c++ -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -DINT128_FOUND -DWITH_LAMBDA_EXPRESSION -std=c++0x -Wno-invalid-offsetof -MD -MT ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Graph.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Graph.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Graph.cpp.o -c /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/debruijn/impl/Graph.cpp [ 20%] Building CXX object ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Terminator.cpp.o cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/src && /usr/bin/c++ -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -DINT128_FOUND -DWITH_LAMBDA_EXPRESSION -std=c++0x -Wno-invalid-offsetof -MD -MT ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Terminator.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Terminator.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Terminator.cpp.o -c /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/debruijn/impl/Terminator.cpp In file included from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5.hpp:35, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:33, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:471, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:466, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/kmer/impl/DebloomAlgorithm.hpp:45, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/debruijn/impl/Graph.hpp:34, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.hpp:32, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/debruijn/impl/BranchingAlgorithm.cpp:20: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/IteratorFile.hpp: In member function ‘size_t gatb::core::tools::collections::impl::IteratorCountCompressedFile::fill(std::vector&, size_t)’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/IteratorFile.hpp:375:5: warning: no return statement in function returning non-void [-Wreturn-type] 375 | } | ^ [ 24%] Building CXX object ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Traversal.cpp.o cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/src && /usr/bin/c++ -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -DINT128_FOUND -DWITH_LAMBDA_EXPRESSION -std=c++0x -Wno-invalid-offsetof -MD -MT ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Traversal.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Traversal.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Traversal.cpp.o -c /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/debruijn/impl/Traversal.cpp In file included from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5.hpp:35, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:33, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:471, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:466, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/kmer/impl/DebloomAlgorithm.hpp:45, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/debruijn/impl/Graph.hpp:34, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/debruijn/impl/Frontline.hpp:25, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/debruijn/impl/Frontline.cpp:24: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/IteratorFile.hpp: In member function ‘size_t gatb::core::tools::collections::impl::IteratorCountCompressedFile::fill(std::vector&, size_t)’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/IteratorFile.hpp:375:5: warning: no return statement in function returning non-void [-Wreturn-type] 375 | } | ^ In file included from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5.hpp:35, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:33, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:471, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:466, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/kmer/impl/DebloomAlgorithm.hpp:45, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/debruijn/impl/Graph.hpp:34, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/debruijn/impl/Graph.cpp:20: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/IteratorFile.hpp: In member function ‘size_t gatb::core::tools::collections::impl::IteratorCountCompressedFile::fill(std::vector&, size_t)’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/IteratorFile.hpp:375:5: warning: no return statement in function returning non-void [-Wreturn-type] 375 | } | ^ [ 24%] Building CXX object ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/BloomAlgorithm.cpp.o cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/src && /usr/bin/c++ -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -DINT128_FOUND -DWITH_LAMBDA_EXPRESSION -std=c++0x -Wno-invalid-offsetof -MD -MT ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/BloomAlgorithm.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/BloomAlgorithm.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/BloomAlgorithm.cpp.o -c /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp In file included from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5.hpp:35, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:33, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:471, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:466, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/kmer/impl/DebloomAlgorithm.hpp:45, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/debruijn/impl/Graph.hpp:34, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/debruijn/impl/Terminator.cpp:24: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/IteratorFile.hpp: In member function ‘size_t gatb::core::tools::collections::impl::IteratorCountCompressedFile::fill(std::vector&, size_t)’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/IteratorFile.hpp:375:5: warning: no return statement in function returning non-void [-Wreturn-type] 375 | } | ^ [ 27%] Building CXX object ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/BloomBuilder.cpp.o cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/src && /usr/bin/c++ -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -DINT128_FOUND -DWITH_LAMBDA_EXPRESSION -std=c++0x -Wno-invalid-offsetof -MD -MT ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/BloomBuilder.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/BloomBuilder.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/BloomBuilder.cpp.o -c /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/kmer/impl/BloomBuilder.cpp [ 27%] Building CXX object ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/DebloomAlgorithm.cpp.o cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/src && /usr/bin/c++ -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -DINT128_FOUND -DWITH_LAMBDA_EXPRESSION -std=c++0x -Wno-invalid-offsetof -MD -MT ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/DebloomAlgorithm.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/DebloomAlgorithm.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/DebloomAlgorithm.cpp.o -c /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/kmer/impl/DebloomAlgorithm.cpp In file included from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5.hpp:34: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp: In instantiation of ‘gatb::core::tools::collections::impl::BagCountCompressedFile::~BagCountCompressedFile() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:175:5: required from here 175 | ~BagCountCompressedFile () | ^ /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:23: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:46: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 4 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp: In instantiation of ‘gatb::core::tools::collections::impl::BagCountCompressedFile::~BagCountCompressedFile() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:175:5: required from here 175 | ~BagCountCompressedFile () | ^ /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:23: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:46: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 4 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp: In instantiation of ‘gatb::core::tools::collections::impl::BagCountCompressedFile::~BagCountCompressedFile() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:175:5: required from here 175 | ~BagCountCompressedFile () | ^ /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:23: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:46: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 4 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp: In instantiation of ‘gatb::core::tools::collections::impl::BagCountCompressedFile::~BagCountCompressedFile() [with Item = gatb::core::kmer::impl::Kmer<32>::Count]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:175:5: required from here 175 | ~BagCountCompressedFile () | ^ /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:23: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:46: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 4 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu In file included from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5.hpp:35, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:33, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:471, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:466, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/kmer/impl/DebloomAlgorithm.hpp:45, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/debruijn/impl/Graph.hpp:34, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/debruijn/impl/Terminator.hpp:25, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/debruijn/impl/Traversal.hpp:23, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:24: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/IteratorFile.hpp: In member function ‘size_t gatb::core::tools::collections::impl::IteratorCountCompressedFile::fill(std::vector&, size_t)’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/IteratorFile.hpp:375:5: warning: no return statement in function returning non-void [-Wreturn-type] 375 | } | ^ In file included from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp: In member function ‘void gatb::core::tools::collections::impl::CollectionAbstract::addProperty(const std::string&, const char*, ...) [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:113:19: warning: ignoring return value of ‘int vasprintf(char**, const char*, __gnuc_va_list)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 113 | vasprintf (&buffer, fmt, args); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp: In member function ‘void gatb::core::tools::collections::impl::CollectionAbstract::addProperty(const std::string&, const char*, ...) [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:113:19: warning: ignoring return value of ‘int vasprintf(char**, const char*, __gnuc_va_list)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp: In member function ‘void gatb::core::tools::collections::impl::CollectionAbstract::addProperty(const std::string&, const char*, ...) [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:113:19: warning: ignoring return value of ‘int vasprintf(char**, const char*, __gnuc_va_list)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp: In member function ‘void gatb::core::tools::collections::impl::CollectionAbstract::addProperty(const std::string&, const char*, ...) [with Item = gatb::core::kmer::impl::Kmer<32>::Count]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:113:19: warning: ignoring return value of ‘int vasprintf(char**, const char*, __gnuc_va_list)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/debruijn/impl/Traversal.cpp: In member function ‘gatb::core::debruijn::impl::Path gatb::core::debruijn::impl::MonumentTraversal::most_abundant_consensus(std::set&)’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/debruijn/impl/Traversal.cpp:772:47: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘long int’ [-Wformat=] 772 | printf("path: %s mean abundance: %d\n",p_str.c_str(),mean_abundance); | ~^ ~~~~~~~~~~~~~~ | | | | int long int | %ld In file included from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5.hpp:35, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:33, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:471, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:466, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.hpp:35, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp:20: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/IteratorFile.hpp: In member function ‘size_t gatb::core::tools::collections::impl::IteratorCountCompressedFile::fill(std::vector&, size_t)’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/IteratorFile.hpp:375:5: warning: no return statement in function returning non-void [-Wreturn-type] 375 | } | ^ /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In static member function ‘static gatb::core::debruijn::impl::Graph gatb::core::debruijn::impl::Graph::create(gatb::core::bank::IBank*, const char*, ...)’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/debruijn/impl/Graph.cpp:566:15: warning: ignoring return value of ‘int vasprintf(char**, const char*, __gnuc_va_list)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 566 | vasprintf (&buffer, fmt, args); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/debruijn/impl/Graph.cpp: In static member function ‘static gatb::core::debruijn::impl::Graph gatb::core::debruijn::impl::Graph::create(const char*, ...)’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/debruijn/impl/Graph.cpp:590:15: warning: ignoring return value of ‘int vasprintf(char**, const char*, __gnuc_va_list)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 590 | vasprintf (&buffer, fmt, args); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/debruijn/impl/Graph.cpp:30: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/misc/impl/Stringify.hpp: In static member function ‘static std::string gatb::core::tools::misc::impl::Stringify::format(const char*, ...)’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/misc/impl/Stringify.hpp:55:19: warning: ignoring return value of ‘int vasprintf(char**, const char*, __gnuc_va_list)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 55 | vasprintf (&buffer, fmt, args); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ [ 31%] Building CXX object ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/MPHFAlgorithm.cpp.o cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/src && /usr/bin/c++ -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -DINT128_FOUND -DWITH_LAMBDA_EXPRESSION -std=c++0x -Wno-invalid-offsetof -MD -MT ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/MPHFAlgorithm.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/MPHFAlgorithm.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/MPHFAlgorithm.cpp.o -c /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp In file included from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5.hpp:35, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:33, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:471, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:466, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/kmer/impl/DebloomAlgorithm.hpp:45, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/kmer/impl/DebloomAlgorithm.cpp:20: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/IteratorFile.hpp: In member function ‘size_t gatb::core::tools::collections::impl::IteratorCountCompressedFile::fill(std::vector&, size_t)’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/IteratorFile.hpp:375:5: warning: no return statement in function returning non-void [-Wreturn-type] 375 | } | ^ In file included from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5.hpp:34: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp: In instantiation of ‘gatb::core::tools::collections::impl::BagCountCompressedFile::~BagCountCompressedFile() [with Item = gatb::core::tools::math::NativeInt8]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:175:5: required from here 175 | ~BagCountCompressedFile () | ^ /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:23: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:46: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 4 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu In file included from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp: In member function ‘void gatb::core::tools::collections::impl::CollectionAbstract::addProperty(const std::string&, const char*, ...) [with Item = gatb::core::tools::math::NativeInt8]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:113:19: warning: ignoring return value of ‘int vasprintf(char**, const char*, __gnuc_va_list)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 113 | vasprintf (&buffer, fmt, args); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5.hpp:35, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:33, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:471, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:466, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/MPHF.hpp:33, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/MapMPHF.hpp:32, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.hpp:29, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/kmer/impl/MPHFAlgorithm.cpp:20: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/IteratorFile.hpp: In member function ‘size_t gatb::core::tools::collections::impl::IteratorCountCompressedFile::fill(std::vector&, size_t)’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/IteratorFile.hpp:375:5: warning: no return statement in function returning non-void [-Wreturn-type] 375 | } | ^ In file included from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5.hpp:34: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp: In instantiation of ‘gatb::core::tools::collections::impl::BagCountCompressedFile::~BagCountCompressedFile() [with Item = gatb::core::tools::math::NativeInt8]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:175:5: required from here 175 | ~BagCountCompressedFile () | ^ /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:23: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:46: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 4 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp: In instantiation of ‘gatb::core::tools::collections::impl::BagCountCompressedFile::~BagCountCompressedFile() [with Item = gatb::core::tools::math::LargeInt<4>]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:175:5: required from here 175 | ~BagCountCompressedFile () | ^ /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:23: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:46: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 4 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp: In instantiation of ‘gatb::core::tools::collections::impl::BagCountCompressedFile::~BagCountCompressedFile() [with Item = gatb::core::tools::math::LargeInt<3>]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:175:5: required from here 175 | ~BagCountCompressedFile () | ^ /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:23: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:46: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 4 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp: In instantiation of ‘gatb::core::tools::collections::impl::BagCountCompressedFile::~BagCountCompressedFile() [with Item = gatb::core::tools::math::LargeInt<2>]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:175:5: required from here 175 | ~BagCountCompressedFile () | ^ /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:23: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:46: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 4 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp: In instantiation of ‘gatb::core::tools::collections::impl::BagCountCompressedFile::~BagCountCompressedFile() [with Item = gatb::core::tools::math::LargeInt<1>]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:175:5: required from here 175 | ~BagCountCompressedFile () | ^ /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:23: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:46: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 4 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu In file included from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp: In member function ‘void gatb::core::tools::collections::impl::CollectionAbstract::addProperty(const std::string&, const char*, ...) [with Item = gatb::core::tools::math::NativeInt8]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:113:19: warning: ignoring return value of ‘int vasprintf(char**, const char*, __gnuc_va_list)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 113 | vasprintf (&buffer, fmt, args); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp: In member function ‘void gatb::core::tools::collections::impl::CollectionAbstract::addProperty(const std::string&, const char*, ...) [with Item = gatb::core::tools::math::LargeInt<4>]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:113:19: warning: ignoring return value of ‘int vasprintf(char**, const char*, __gnuc_va_list)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp: In member function ‘void gatb::core::tools::collections::impl::CollectionAbstract::addProperty(const std::string&, const char*, ...) [with Item = gatb::core::tools::math::LargeInt<3>]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:113:19: warning: ignoring return value of ‘int vasprintf(char**, const char*, __gnuc_va_list)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp: In member function ‘void gatb::core::tools::collections::impl::CollectionAbstract::addProperty(const std::string&, const char*, ...) [with Item = gatb::core::tools::math::LargeInt<2>]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:113:19: warning: ignoring return value of ‘int vasprintf(char**, const char*, __gnuc_va_list)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp: In member function ‘void gatb::core::tools::collections::impl::CollectionAbstract::addProperty(const std::string&, const char*, ...) [with Item = gatb::core::tools::math::LargeInt<1>]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:113:19: warning: ignoring return value of ‘int vasprintf(char**, const char*, __gnuc_va_list)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] [ 34%] Building CXX object ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/Model.cpp.o cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/src && /usr/bin/c++ -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -DINT128_FOUND -DWITH_LAMBDA_EXPRESSION -std=c++0x -Wno-invalid-offsetof -MD -MT ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/Model.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/Model.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/Model.cpp.o -c /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/kmer/impl/Model.cpp [ 34%] Building CXX object ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/PartitionsCommand.cpp.o cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/src && /usr/bin/c++ -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -DINT128_FOUND -DWITH_LAMBDA_EXPRESSION -std=c++0x -Wno-invalid-offsetof -MD -MT ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/PartitionsCommand.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/PartitionsCommand.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/PartitionsCommand.cpp.o -c /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp [ 37%] Building CXX object ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/SortingCountAlgorithm.cpp.o cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/src && /usr/bin/c++ -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -DINT128_FOUND -DWITH_LAMBDA_EXPRESSION -std=c++0x -Wno-invalid-offsetof -MD -MT ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/SortingCountAlgorithm.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/SortingCountAlgorithm.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/SortingCountAlgorithm.cpp.o -c /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp In file included from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5.hpp:35, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:33, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:471, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:466, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/kmer/impl/PartitionsCommand.hpp:31, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/kmer/impl/PartitionsCommand.cpp:20: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/IteratorFile.hpp: In member function ‘size_t gatb::core::tools::collections::impl::IteratorCountCompressedFile::fill(std::vector&, size_t)’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/IteratorFile.hpp:375:5: warning: no return statement in function returning non-void [-Wreturn-type] 375 | } | ^ [ 37%] Building CXX object ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/SortingCountAlgorithmTemplates1.cpp.o cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/src && /usr/bin/c++ -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -DINT128_FOUND -DWITH_LAMBDA_EXPRESSION -std=c++0x -Wno-invalid-offsetof -MD -MT ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/SortingCountAlgorithmTemplates1.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/SortingCountAlgorithmTemplates1.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/SortingCountAlgorithmTemplates1.cpp.o -c /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithmTemplates1.cpp In file included from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5.hpp:35, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:33, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:471, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:466, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:38, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:25: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/IteratorFile.hpp: In member function ‘size_t gatb::core::tools::collections::impl::IteratorCountCompressedFile::fill(std::vector&, size_t)’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/IteratorFile.hpp:375:5: warning: no return statement in function returning non-void [-Wreturn-type] 375 | } | ^ In file included from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5.hpp:35, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:33, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:471, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:466, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:38, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:25, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithmTemplates1.cpp:1: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/IteratorFile.hpp: In member function ‘size_t gatb::core::tools::collections::impl::IteratorCountCompressedFile::fill(std::vector&, size_t)’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/IteratorFile.hpp:375:5: warning: no return statement in function returning non-void [-Wreturn-type] 375 | } | ^ [ 41%] Building CXX object ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/SortingCountAlgorithmTemplates2.cpp.o cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/src && /usr/bin/c++ -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -DINT128_FOUND -DWITH_LAMBDA_EXPRESSION -std=c++0x -Wno-invalid-offsetof -MD -MT ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/SortingCountAlgorithmTemplates2.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/SortingCountAlgorithmTemplates2.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/SortingCountAlgorithmTemplates2.cpp.o -c /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithmTemplates2.cpp In file included from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5.hpp:34: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp: In instantiation of ‘gatb::core::tools::collections::impl::BagCountCompressedFile::~BagCountCompressedFile() [with Item = gatb::core::tools::math::LargeInt<1>]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:175:5: required from here 175 | ~BagCountCompressedFile () | ^ /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:23: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:46: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 4 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp: In instantiation of ‘gatb::core::tools::collections::impl::BagCountCompressedFile::~BagCountCompressedFile() [with Item = gatb::core::tools::math::NativeInt64]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:175:5: required from here 175 | ~BagCountCompressedFile () | ^ /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:23: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:46: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 4 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp: In instantiation of ‘gatb::core::tools::collections::impl::BagCountCompressedFile::~BagCountCompressedFile() [with Item = gatb::core::tools::misc::IHistogram::Entry]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:175:5: required from here 175 | ~BagCountCompressedFile () | ^ /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:23: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:46: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 4 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp: In instantiation of ‘gatb::core::tools::collections::impl::BagCountCompressedFile::~BagCountCompressedFile() [with Item = gatb::core::kmer::impl::Kmer<32>::Count]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:175:5: required from here 175 | ~BagCountCompressedFile () | ^ /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:23: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:46: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 4 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu In file included from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp: In member function ‘void gatb::core::tools::collections::impl::CollectionAbstract::addProperty(const std::string&, const char*, ...) [with Item = gatb::core::tools::math::LargeInt<1>]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:113:19: warning: ignoring return value of ‘int vasprintf(char**, const char*, __gnuc_va_list)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 113 | vasprintf (&buffer, fmt, args); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp: In member function ‘void gatb::core::tools::collections::impl::CollectionAbstract::addProperty(const std::string&, const char*, ...) [with Item = gatb::core::tools::math::NativeInt64]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:113:19: warning: ignoring return value of ‘int vasprintf(char**, const char*, __gnuc_va_list)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp: In member function ‘void gatb::core::tools::collections::impl::CollectionAbstract::addProperty(const std::string&, const char*, ...) [with Item = gatb::core::tools::misc::IHistogram::Entry]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:113:19: warning: ignoring return value of ‘int vasprintf(char**, const char*, __gnuc_va_list)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp: In member function ‘void gatb::core::tools::collections::impl::CollectionAbstract::addProperty(const std::string&, const char*, ...) [with Item = gatb::core::kmer::impl::Kmer<32>::Count]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:113:19: warning: ignoring return value of ‘int vasprintf(char**, const char*, __gnuc_va_list)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] In file included from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:26: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/misc/impl/Stringify.hpp: In static member function ‘static std::string gatb::core::tools::misc::impl::Stringify::format(const char*, ...)’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/misc/impl/Stringify.hpp:55:19: warning: ignoring return value of ‘int vasprintf(char**, const char*, __gnuc_va_list)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 55 | vasprintf (&buffer, fmt, args); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ [ 41%] Building CXX object ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/SortingCountAlgorithmTemplates3.cpp.o cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/src && /usr/bin/c++ -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -DINT128_FOUND -DWITH_LAMBDA_EXPRESSION -std=c++0x -Wno-invalid-offsetof -MD -MT ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/SortingCountAlgorithmTemplates3.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/SortingCountAlgorithmTemplates3.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/SortingCountAlgorithmTemplates3.cpp.o -c /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithmTemplates3.cpp In file included from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5.hpp:35, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:33, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:471, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:466, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:38, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:25, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithmTemplates2.cpp:1: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/IteratorFile.hpp: In member function ‘size_t gatb::core::tools::collections::impl::IteratorCountCompressedFile::fill(std::vector&, size_t)’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/IteratorFile.hpp:375:5: warning: no return statement in function returning non-void [-Wreturn-type] 375 | } | ^ In file included from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5.hpp:35, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:33, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:471, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:466, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:38, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:25, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithmTemplates3.cpp:1: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/IteratorFile.hpp: In member function ‘size_t gatb::core::tools::collections::impl::IteratorCountCompressedFile::fill(std::vector&, size_t)’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/IteratorFile.hpp:375:5: warning: no return statement in function returning non-void [-Wreturn-type] 375 | } | ^ In file included from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5.hpp:34: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp: In instantiation of ‘gatb::core::tools::collections::impl::BagCountCompressedFile::~BagCountCompressedFile() [with Item = gatb::core::tools::math::LargeInt<2>]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:175:5: required from here 175 | ~BagCountCompressedFile () | ^ /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:23: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:46: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 4 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp: In instantiation of ‘gatb::core::tools::collections::impl::BagCountCompressedFile::~BagCountCompressedFile() [with Item = gatb::core::tools::math::NativeInt64]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:175:5: required from here 175 | ~BagCountCompressedFile () | ^ /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:23: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:46: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 4 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp: In instantiation of ‘gatb::core::tools::collections::impl::BagCountCompressedFile::~BagCountCompressedFile() [with Item = gatb::core::tools::misc::IHistogram::Entry]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:175:5: required from here 175 | ~BagCountCompressedFile () | ^ /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:23: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:46: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 4 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp: In instantiation of ‘gatb::core::tools::collections::impl::BagCountCompressedFile::~BagCountCompressedFile() [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:175:5: required from here 175 | ~BagCountCompressedFile () | ^ /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:23: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:46: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 4 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu In file included from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp: In member function ‘void gatb::core::tools::collections::impl::CollectionAbstract::addProperty(const std::string&, const char*, ...) [with Item = gatb::core::tools::math::LargeInt<2>]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:113:19: warning: ignoring return value of ‘int vasprintf(char**, const char*, __gnuc_va_list)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 113 | vasprintf (&buffer, fmt, args); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp: In member function ‘void gatb::core::tools::collections::impl::CollectionAbstract::addProperty(const std::string&, const char*, ...) [with Item = gatb::core::tools::math::NativeInt64]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:113:19: warning: ignoring return value of ‘int vasprintf(char**, const char*, __gnuc_va_list)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp: In member function ‘void gatb::core::tools::collections::impl::CollectionAbstract::addProperty(const std::string&, const char*, ...) [with Item = gatb::core::tools::misc::IHistogram::Entry]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:113:19: warning: ignoring return value of ‘int vasprintf(char**, const char*, __gnuc_va_list)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp: In member function ‘void gatb::core::tools::collections::impl::CollectionAbstract::addProperty(const std::string&, const char*, ...) [with Item = gatb::core::kmer::impl::Kmer<64>::Count]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:113:19: warning: ignoring return value of ‘int vasprintf(char**, const char*, __gnuc_va_list)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] In file included from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:26: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/misc/impl/Stringify.hpp: In static member function ‘static std::string gatb::core::tools::misc::impl::Stringify::format(const char*, ...)’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/misc/impl/Stringify.hpp:55:19: warning: ignoring return value of ‘int vasprintf(char**, const char*, __gnuc_va_list)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 55 | vasprintf (&buffer, fmt, args); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5.hpp:34: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp: In instantiation of ‘gatb::core::tools::collections::impl::BagCountCompressedFile::~BagCountCompressedFile() [with Item = gatb::core::tools::math::LargeInt<3>]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:175:5: required from here 175 | ~BagCountCompressedFile () | ^ /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:23: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:46: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 4 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp: In instantiation of ‘gatb::core::tools::collections::impl::BagCountCompressedFile::~BagCountCompressedFile() [with Item = gatb::core::tools::math::NativeInt64]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:175:5: required from here 175 | ~BagCountCompressedFile () | ^ /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:23: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:46: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 4 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp: In instantiation of ‘gatb::core::tools::collections::impl::BagCountCompressedFile::~BagCountCompressedFile() [with Item = gatb::core::tools::misc::IHistogram::Entry]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:175:5: required from here 175 | ~BagCountCompressedFile () | ^ /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:23: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:46: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 4 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp: In instantiation of ‘gatb::core::tools::collections::impl::BagCountCompressedFile::~BagCountCompressedFile() [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:175:5: required from here 175 | ~BagCountCompressedFile () | ^ /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:23: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:46: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 4 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu In file included from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp: In member function ‘void gatb::core::tools::collections::impl::CollectionAbstract::addProperty(const std::string&, const char*, ...) [with Item = gatb::core::tools::math::LargeInt<3>]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:113:19: warning: ignoring return value of ‘int vasprintf(char**, const char*, __gnuc_va_list)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 113 | vasprintf (&buffer, fmt, args); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp: In member function ‘void gatb::core::tools::collections::impl::CollectionAbstract::addProperty(const std::string&, const char*, ...) [with Item = gatb::core::tools::math::NativeInt64]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:113:19: warning: ignoring return value of ‘int vasprintf(char**, const char*, __gnuc_va_list)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp: In member function ‘void gatb::core::tools::collections::impl::CollectionAbstract::addProperty(const std::string&, const char*, ...) [with Item = gatb::core::tools::misc::IHistogram::Entry]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:113:19: warning: ignoring return value of ‘int vasprintf(char**, const char*, __gnuc_va_list)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp: In member function ‘void gatb::core::tools::collections::impl::CollectionAbstract::addProperty(const std::string&, const char*, ...) [with Item = gatb::core::kmer::impl::Kmer<96>::Count]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:113:19: warning: ignoring return value of ‘int vasprintf(char**, const char*, __gnuc_va_list)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] In file included from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:26: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/misc/impl/Stringify.hpp: In static member function ‘static std::string gatb::core::tools::misc::impl::Stringify::format(const char*, ...)’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/misc/impl/Stringify.hpp:55:19: warning: ignoring return value of ‘int vasprintf(char**, const char*, __gnuc_va_list)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 55 | vasprintf (&buffer, fmt, args); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ [ 44%] Building CXX object ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/SortingCountAlgorithmTemplates4.cpp.o cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/src && /usr/bin/c++ -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -DINT128_FOUND -DWITH_LAMBDA_EXPRESSION -std=c++0x -Wno-invalid-offsetof -MD -MT ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/SortingCountAlgorithmTemplates4.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/SortingCountAlgorithmTemplates4.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/SortingCountAlgorithmTemplates4.cpp.o -c /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithmTemplates4.cpp [ 44%] Building CXX object ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemCommon.cpp.o cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/src && /usr/bin/c++ -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -DINT128_FOUND -DWITH_LAMBDA_EXPRESSION -std=c++0x -Wno-invalid-offsetof -MD -MT ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemCommon.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemCommon.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemCommon.cpp.o -c /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/system/impl/FileSystemCommon.cpp In file included from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/system/impl/FileSystemCommon.hpp:32, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/system/impl/FileSystemCommon.cpp:20: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/system/api/Exception.hpp: In constructor ‘gatb::core::system::ExceptionErrno::ExceptionErrno(const char*, ...)’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/system/api/Exception.hpp:126:24: warning: ignoring return value of ‘char* strerror_r(int, char*, size_t)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 126 | strerror_r (errno, buffer, BUFSIZ); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5.hpp:35, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:33, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:471, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:466, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.hpp:38, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:25, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithmTemplates4.cpp:1: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/IteratorFile.hpp: In member function ‘size_t gatb::core::tools::collections::impl::IteratorCountCompressedFile::fill(std::vector&, size_t)’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/IteratorFile.hpp:375:5: warning: no return statement in function returning non-void [-Wreturn-type] 375 | } | ^ [ 48%] Building CXX object ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemLinux.cpp.o cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/src && /usr/bin/c++ -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -DINT128_FOUND -DWITH_LAMBDA_EXPRESSION -std=c++0x -Wno-invalid-offsetof -MD -MT ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemLinux.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemLinux.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemLinux.cpp.o -c /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/system/impl/FileSystemLinux.cpp In file included from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5.hpp:34: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp: In instantiation of ‘gatb::core::tools::collections::impl::BagCountCompressedFile::~BagCountCompressedFile() [with Item = gatb::core::tools::math::LargeInt<4>]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:175:5: required from here 175 | ~BagCountCompressedFile () | ^ /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:23: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:46: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 4 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp: In instantiation of ‘gatb::core::tools::collections::impl::BagCountCompressedFile::~BagCountCompressedFile() [with Item = gatb::core::tools::math::NativeInt64]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:175:5: required from here 175 | ~BagCountCompressedFile () | ^ /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:23: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:46: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 4 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp: In instantiation of ‘gatb::core::tools::collections::impl::BagCountCompressedFile::~BagCountCompressedFile() [with Item = gatb::core::tools::misc::IHistogram::Entry]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:175:5: required from here 175 | ~BagCountCompressedFile () | ^ /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:23: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:46: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 4 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp: In instantiation of ‘gatb::core::tools::collections::impl::BagCountCompressedFile::~BagCountCompressedFile() [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:175:5: required from here 175 | ~BagCountCompressedFile () | ^ /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:23: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:46: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 4 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu In file included from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp: In member function ‘void gatb::core::tools::collections::impl::CollectionAbstract::addProperty(const std::string&, const char*, ...) [with Item = gatb::core::tools::math::LargeInt<4>]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:113:19: warning: ignoring return value of ‘int vasprintf(char**, const char*, __gnuc_va_list)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 113 | vasprintf (&buffer, fmt, args); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp: In member function ‘void gatb::core::tools::collections::impl::CollectionAbstract::addProperty(const std::string&, const char*, ...) [with Item = gatb::core::tools::math::NativeInt64]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:113:19: warning: ignoring return value of ‘int vasprintf(char**, const char*, __gnuc_va_list)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp: In member function ‘void gatb::core::tools::collections::impl::CollectionAbstract::addProperty(const std::string&, const char*, ...) [with Item = gatb::core::tools::misc::IHistogram::Entry]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:113:19: warning: ignoring return value of ‘int vasprintf(char**, const char*, __gnuc_va_list)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp: In member function ‘void gatb::core::tools::collections::impl::CollectionAbstract::addProperty(const std::string&, const char*, ...) [with Item = gatb::core::kmer::impl::Kmer<128>::Count]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:113:19: warning: ignoring return value of ‘int vasprintf(char**, const char*, __gnuc_va_list)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] In file included from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/kmer/impl/SortingCountAlgorithm.cpp:26: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/misc/impl/Stringify.hpp: In static member function ‘static std::string gatb::core::tools::misc::impl::Stringify::format(const char*, ...)’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/misc/impl/Stringify.hpp:55:19: warning: ignoring return value of ‘int vasprintf(char**, const char*, __gnuc_va_list)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 55 | vasprintf (&buffer, fmt, args); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ [ 48%] Building CXX object ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemMacos.cpp.o cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/src && /usr/bin/c++ -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -DINT128_FOUND -DWITH_LAMBDA_EXPRESSION -std=c++0x -Wno-invalid-offsetof -MD -MT ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemMacos.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemMacos.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemMacos.cpp.o -c /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/system/impl/FileSystemMacos.cpp [ 51%] Building CXX object ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/System.cpp.o cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/src && /usr/bin/c++ -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -DINT128_FOUND -DWITH_LAMBDA_EXPRESSION -std=c++0x -Wno-invalid-offsetof -MD -MT ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/System.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/system/impl/System.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/System.cpp.o -c /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/system/impl/System.cpp [ 51%] Building CXX object ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/SystemInfoCommon.cpp.o cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/src && /usr/bin/c++ -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -DINT128_FOUND -DWITH_LAMBDA_EXPRESSION -std=c++0x -Wno-invalid-offsetof -MD -MT ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/SystemInfoCommon.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/system/impl/SystemInfoCommon.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/SystemInfoCommon.cpp.o -c /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/system/impl/SystemInfoCommon.cpp [ 55%] Building CXX object ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/ThreadLinux.cpp.o cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/src && /usr/bin/c++ -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -DINT128_FOUND -DWITH_LAMBDA_EXPRESSION -std=c++0x -Wno-invalid-offsetof -MD -MT ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/ThreadLinux.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/system/impl/ThreadLinux.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/ThreadLinux.cpp.o -c /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/system/impl/ThreadLinux.cpp [ 55%] Building CXX object ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/ThreadMacos.cpp.o cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/src && /usr/bin/c++ -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -DINT128_FOUND -DWITH_LAMBDA_EXPRESSION -std=c++0x -Wno-invalid-offsetof -MD -MT ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/system/impl/ThreadMacos.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/system/impl/ThreadMacos.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/system/impl/ThreadMacos.cpp.o -c /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/system/impl/ThreadMacos.cpp [ 58%] Building CXX object ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/tools/collections/impl/Bloom.cpp.o cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/src && /usr/bin/c++ -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -DINT128_FOUND -DWITH_LAMBDA_EXPRESSION -std=c++0x -Wno-invalid-offsetof -MD -MT ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/tools/collections/impl/Bloom.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/tools/collections/impl/Bloom.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/tools/collections/impl/Bloom.cpp.o -c /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/Bloom.cpp [ 58%] Building CXX object ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/tools/designpattern/impl/Command.cpp.o cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/src && /usr/bin/c++ -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -DINT128_FOUND -DWITH_LAMBDA_EXPRESSION -std=c++0x -Wno-invalid-offsetof -MD -MT ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/tools/designpattern/impl/Command.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/tools/designpattern/impl/Command.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/tools/designpattern/impl/Command.cpp.o -c /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/designpattern/impl/Command.cpp [ 62%] Building CXX object ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/tools/designpattern/impl/Observer.cpp.o cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/src && /usr/bin/c++ -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -DINT128_FOUND -DWITH_LAMBDA_EXPRESSION -std=c++0x -Wno-invalid-offsetof -MD -MT ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/tools/designpattern/impl/Observer.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/tools/designpattern/impl/Observer.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/tools/designpattern/impl/Observer.cpp.o -c /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/designpattern/impl/Observer.cpp [ 65%] Building CXX object ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Algorithm.cpp.o cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/src && /usr/bin/c++ -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -DINT128_FOUND -DWITH_LAMBDA_EXPRESSION -std=c++0x -Wno-invalid-offsetof -MD -MT ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Algorithm.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Algorithm.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Algorithm.cpp.o -c /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/misc/impl/Algorithm.cpp [ 65%] Building CXX object ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Histogram.cpp.o cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/src && /usr/bin/c++ -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -DINT128_FOUND -DWITH_LAMBDA_EXPRESSION -std=c++0x -Wno-invalid-offsetof -MD -MT ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Histogram.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Histogram.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Histogram.cpp.o -c /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/misc/impl/Histogram.cpp [ 68%] Building CXX object ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/OptionsParser.cpp.o cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/src && /usr/bin/c++ -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -DINT128_FOUND -DWITH_LAMBDA_EXPRESSION -std=c++0x -Wno-invalid-offsetof -MD -MT ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/OptionsParser.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/OptionsParser.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/OptionsParser.cpp.o -c /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/misc/impl/OptionsParser.cpp [ 68%] Building CXX object ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Progress.cpp.o cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/src && /usr/bin/c++ -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -DINT128_FOUND -DWITH_LAMBDA_EXPRESSION -std=c++0x -Wno-invalid-offsetof -MD -MT ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Progress.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Progress.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Progress.cpp.o -c /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/misc/impl/Progress.cpp [ 72%] Building CXX object ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Property.cpp.o cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/src && /usr/bin/c++ -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -DINT128_FOUND -DWITH_LAMBDA_EXPRESSION -std=c++0x -Wno-invalid-offsetof -MD -MT ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Property.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Property.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Property.cpp.o -c /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/misc/impl/Property.cpp In file included from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/misc/impl/OptionsParser.cpp:23: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/misc/impl/Stringify.hpp: In static member function ‘static std::string gatb::core::tools::misc::impl::Stringify::format(const char*, ...)’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/misc/impl/Stringify.hpp:55:19: warning: ignoring return value of ‘int vasprintf(char**, const char*, __gnuc_va_list)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 55 | vasprintf (&buffer, fmt, args); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ [ 72%] Building CXX object ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/TimeInfo.cpp.o cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/src && /usr/bin/c++ -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -DINT128_FOUND -DWITH_LAMBDA_EXPRESSION -std=c++0x -Wno-invalid-offsetof -MD -MT ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/TimeInfo.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/TimeInfo.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/TimeInfo.cpp.o -c /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/misc/impl/TimeInfo.cpp /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/misc/impl/Property.cpp: In member function ‘virtual void gatb::core::tools::misc::impl::Properties::setInt(const std::string&, const int64_t&)’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/misc/impl/Property.cpp:397:43: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 4 has type ‘long int’ [-Wformat=] 397 | snprintf (buffer, sizeof(buffer), "%lld", value); | ~~~^ ~~~~~ | | | | | long int | long long int | %ld [ 75%] Building CXX object ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Tokenizer.cpp.o cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/src && /usr/bin/c++ -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -DINT128_FOUND -DWITH_LAMBDA_EXPRESSION -std=c++0x -Wno-invalid-offsetof -MD -MT ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Tokenizer.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Tokenizer.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Tokenizer.cpp.o -c /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/misc/impl/Tokenizer.cpp [ 75%] Building CXX object ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Tool.cpp.o cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/src && /usr/bin/c++ -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -DINT128_FOUND -DWITH_LAMBDA_EXPRESSION -std=c++0x -Wno-invalid-offsetof -MD -MT ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Tool.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Tool.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Tool.cpp.o -c /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/misc/impl/Tool.cpp [ 79%] Building CXX object ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/XmlReader.cpp.o cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/src && /usr/bin/c++ -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -DINT128_FOUND -DWITH_LAMBDA_EXPRESSION -std=c++0x -Wno-invalid-offsetof -MD -MT ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/XmlReader.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/XmlReader.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/XmlReader.cpp.o -c /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/misc/impl/XmlReader.cpp [ 79%] Building CXX object ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/tools/storage/impl/Storage.cpp.o cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/src && /usr/bin/c++ -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -DINT128_FOUND -DWITH_LAMBDA_EXPRESSION -std=c++0x -Wno-invalid-offsetof -MD -MT ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/tools/storage/impl/Storage.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/tools/storage/impl/Storage.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/tools/storage/impl/Storage.cpp.o -c /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/Storage.cpp [ 82%] Building CXX object ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/tools/storage/impl/StorageTools.cpp.o cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/src && /usr/bin/c++ -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -DINT128_FOUND -DWITH_LAMBDA_EXPRESSION -std=c++0x -Wno-invalid-offsetof -MD -MT ext/gatb-core/src/CMakeFiles/gatbcore-static.dir/gatb/tools/storage/impl/StorageTools.cpp.o -MF CMakeFiles/gatbcore-static.dir/gatb/tools/storage/impl/StorageTools.cpp.o.d -o CMakeFiles/gatbcore-static.dir/gatb/tools/storage/impl/StorageTools.cpp.o -c /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/StorageTools.cpp In file included from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5.hpp:35, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/StorageHDF5.hpp:33, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/Storage.tpp:471, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:466, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/Storage.cpp:22: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/IteratorFile.hpp: In member function ‘size_t gatb::core::tools::collections::impl::IteratorCountCompressedFile::fill(std::vector&, size_t)’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/IteratorFile.hpp:375:5: warning: no return statement in function returning non-void [-Wreturn-type] 375 | } | ^ In file included from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/CollectionHDF5.hpp:34: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp: In instantiation of ‘gatb::core::tools::collections::impl::BagCountCompressedFile::~BagCountCompressedFile() [with Item = gatb::core::tools::math::NativeInt8]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:175:5: required from here 175 | ~BagCountCompressedFile () | ^ /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:23: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/BagFile.hpp:177:46: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 4 has type ‘u_int64_t’ {aka ‘long unsigned int’} [-Wformat=] 177 | printf("In %llu B (%llu MB ) Out %llu B (%llu MB ) ratio %f \n",_sizeInput,_sizeInput/(1024LL*1024LL), _sizeOutput,_sizeOutput/(1024LL*1024LL), _sizeInput / (float) _sizeOutput); | ~~~^ ~~~~~~~~~~~ | | | | long long unsigned int u_int64_t {aka long unsigned int} | %lu In file included from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/storage/impl/Storage.hpp:40: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp: In member function ‘void gatb::core::tools::collections::impl::CollectionAbstract::addProperty(const std::string&, const char*, ...) [with Item = gatb::core::tools::math::NativeInt8]’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/CollectionAbstract.hpp:113:19: warning: ignoring return value of ‘int vasprintf(char**, const char*, __gnuc_va_list)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 113 | vasprintf (&buffer, fmt, args); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ [ 82%] Linking CXX static library ../lib/None/libgatbcore.a cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/src && /usr/bin/cmake -P CMakeFiles/gatbcore-static.dir/cmake_clean_target.cmake cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/gatbcore-static.dir/link.txt --verbose=1 /usr/bin/ar qc ../lib/None/libgatbcore.a "CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankAlbum.cpp.o" "CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankBinary.cpp.o" "CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankConverterAlgorithm.cpp.o" "CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankFasta.cpp.o" "CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankHelpers.cpp.o" "CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankRandom.cpp.o" "CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankRegistery.cpp.o" "CMakeFiles/gatbcore-static.dir/gatb/bank/impl/BankSplitter.cpp.o" "CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/BranchingAlgorithm.cpp.o" "CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Frontline.cpp.o" "CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Graph.cpp.o" "CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Terminator.cpp.o" "CMakeFiles/gatbcore-static.dir/gatb/debruijn/impl/Traversal.cpp.o" "CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/BloomAlgorithm.cpp.o" "CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/BloomBuilder.cpp.o" "CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/DebloomAlgorithm.cpp.o" "CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/MPHFAlgorithm.cpp.o" "CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/Model.cpp.o" "CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/PartitionsCommand.cpp.o" "CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/SortingCountAlgorithm.cpp.o" "CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/SortingCountAlgorithmTemplates1.cpp.o" "CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/SortingCountAlgorithmTemplates2.cpp.o" "CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/SortingCountAlgorithmTemplates3.cpp.o" "CMakeFiles/gatbcore-static.dir/gatb/kmer/impl/SortingCountAlgorithmTemplates4.cpp.o" "CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemCommon.cpp.o" "CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemLinux.cpp.o" "CMakeFiles/gatbcore-static.dir/gatb/system/impl/FileSystemMacos.cpp.o" "CMakeFiles/gatbcore-static.dir/gatb/system/impl/System.cpp.o" "CMakeFiles/gatbcore-static.dir/gatb/system/impl/SystemInfoCommon.cpp.o" "CMakeFiles/gatbcore-static.dir/gatb/system/impl/ThreadLinux.cpp.o" "CMakeFiles/gatbcore-static.dir/gatb/system/impl/ThreadMacos.cpp.o" "CMakeFiles/gatbcore-static.dir/gatb/tools/collections/impl/Bloom.cpp.o" "CMakeFiles/gatbcore-static.dir/gatb/tools/designpattern/impl/Command.cpp.o" "CMakeFiles/gatbcore-static.dir/gatb/tools/designpattern/impl/Observer.cpp.o" "CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Algorithm.cpp.o" "CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Histogram.cpp.o" "CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/OptionsParser.cpp.o" "CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Progress.cpp.o" "CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Property.cpp.o" "CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/TimeInfo.cpp.o" "CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Tokenizer.cpp.o" "CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/Tool.cpp.o" "CMakeFiles/gatbcore-static.dir/gatb/tools/misc/impl/XmlReader.cpp.o" "CMakeFiles/gatbcore-static.dir/gatb/tools/storage/impl/Storage.cpp.o" "CMakeFiles/gatbcore-static.dir/gatb/tools/storage/impl/StorageTools.cpp.o" /usr/bin/ranlib ../lib/None/libgatbcore.a make[4]: Leaving directory '/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build' [ 82%] Built target gatbcore-static make -f CMakeFiles/mapsembler2_extremities.dir/build.make CMakeFiles/mapsembler2_extremities.dir/depend make -f ext/gatb-core/tools/CMakeFiles/dbgh5.dir/build.make ext/gatb-core/tools/CMakeFiles/dbgh5.dir/depend make -f ext/gatb-core/tools/CMakeFiles/dbginfo.dir/build.make ext/gatb-core/tools/CMakeFiles/dbginfo.dir/depend make[4]: Entering directory '/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build' cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/CMakeFiles/mapsembler2_extremities.dir/DependInfo.cmake "--color=" make[4]: Entering directory '/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build' cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/tools /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/tools /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/tools/CMakeFiles/dbgh5.dir/DependInfo.cmake "--color=" make[4]: Entering directory '/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build' cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/tools /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/tools /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/tools/CMakeFiles/dbginfo.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build' make[4]: Leaving directory '/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build' make -f CMakeFiles/mapsembler2_extremities.dir/build.make CMakeFiles/mapsembler2_extremities.dir/build make[4]: Leaving directory '/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build' make -f ext/gatb-core/tools/CMakeFiles/dbginfo.dir/build.make ext/gatb-core/tools/CMakeFiles/dbginfo.dir/build make -f ext/gatb-core/tools/CMakeFiles/dbgh5.dir/build.make ext/gatb-core/tools/CMakeFiles/dbgh5.dir/build make[4]: Entering directory '/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build' make[4]: Entering directory '/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build' make[4]: Entering directory '/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build' [ 89%] Building CXX object CMakeFiles/mapsembler2_extremities.dir/src/main.cpp.o [ 89%] Building CXX object ext/gatb-core/tools/CMakeFiles/dbginfo.dir/dbginfo.cpp.o [ 89%] Building CXX object CMakeFiles/mapsembler2_extremities.dir/src/mapsembler2_extremities.cpp.o [ 89%] Building CXX object ext/gatb-core/tools/CMakeFiles/dbgh5.dir/dbgh5.cpp.o /usr/bin/c++ -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/src -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -DINT128_FOUND -DWITH_LAMBDA_EXPRESSION -std=c++0x -Wno-invalid-offsetof -DUNORDERED_MAP_TR1_FOUND=1 -MD -MT CMakeFiles/mapsembler2_extremities.dir/src/main.cpp.o -MF CMakeFiles/mapsembler2_extremities.dir/src/main.cpp.o.d -o CMakeFiles/mapsembler2_extremities.dir/src/main.cpp.o -c /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/src/main.cpp cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/tools && /usr/bin/c++ -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -DINT128_FOUND -DWITH_LAMBDA_EXPRESSION -std=c++0x -Wno-invalid-offsetof -MD -MT ext/gatb-core/tools/CMakeFiles/dbgh5.dir/dbgh5.cpp.o -MF CMakeFiles/dbgh5.dir/dbgh5.cpp.o.d -o CMakeFiles/dbgh5.dir/dbgh5.cpp.o -c /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/tools/dbgh5.cpp cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/tools && /usr/bin/c++ -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -DINT128_FOUND -DWITH_LAMBDA_EXPRESSION -std=c++0x -Wno-invalid-offsetof -MD -MT ext/gatb-core/tools/CMakeFiles/dbginfo.dir/dbginfo.cpp.o -MF CMakeFiles/dbginfo.dir/dbginfo.cpp.o.d -o CMakeFiles/dbginfo.dir/dbginfo.cpp.o -c /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/tools/dbginfo.cpp /usr/bin/c++ -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/src -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/include -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src -I/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/thirdparty -g -O2 -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -DINT128_FOUND -DWITH_LAMBDA_EXPRESSION -std=c++0x -Wno-invalid-offsetof -DUNORDERED_MAP_TR1_FOUND=1 -MD -MT CMakeFiles/mapsembler2_extremities.dir/src/mapsembler2_extremities.cpp.o -MF CMakeFiles/mapsembler2_extremities.dir/src/mapsembler2_extremities.cpp.o.d -o CMakeFiles/mapsembler2_extremities.dir/src/mapsembler2_extremities.cpp.o -c /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/src/mapsembler2_extremities.cpp In file included from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/gatb_core.hpp:42, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/tools/dbginfo.cpp:20: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/IteratorFile.hpp: In member function ‘size_t gatb::core::tools::collections::impl::IteratorCountCompressedFile::fill(std::vector&, size_t)’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/IteratorFile.hpp:375:5: warning: no return statement in function returning non-void [-Wreturn-type] 375 | } | ^ In file included from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/gatb_core.hpp:42, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/tools/dbgh5.cpp:20: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/IteratorFile.hpp: In member function ‘size_t gatb::core::tools::collections::impl::IteratorCountCompressedFile::fill(std::vector&, size_t)’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/IteratorFile.hpp:375:5: warning: no return statement in function returning non-void [-Wreturn-type] 375 | } | ^ In file included from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/gatb_core.hpp:42, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/src/mapsembler2_extremities.hpp:23, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/src/main.cpp:20: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/IteratorFile.hpp: In member function ‘size_t gatb::core::tools::collections::impl::IteratorCountCompressedFile::fill(std::vector&, size_t)’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/IteratorFile.hpp:375:5: warning: no return statement in function returning non-void [-Wreturn-type] 375 | } | ^ In file included from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/gatb_core.hpp:42, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/src/mapsembler2_extremities.hpp:23, from /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/src/mapsembler2_extremities.cpp:13: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/IteratorFile.hpp: In member function ‘size_t gatb::core::tools::collections::impl::IteratorCountCompressedFile::fill(std::vector&, size_t)’: /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/thirdparty/gatb-core/src/gatb/tools/collections/impl/IteratorFile.hpp:375:5: warning: no return statement in function returning non-void [-Wreturn-type] 375 | } | ^ [ 93%] Linking CXX executable ../bin/None/dbgh5 cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/dbgh5.dir/link.txt --verbose=1 [ 96%] Linking CXX executable ../bin/None/dbginfo cd /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/ext/gatb-core/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/dbginfo.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/dbgh5.dir/link.d CMakeFiles/dbgh5.dir/dbgh5.cpp.o -o ../bin/None/dbgh5 ../lib/None/libgatbcore.a -ldl -lpthread -lz -lhdf5 make[4]: Leaving directory '/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build' [ 96%] Built target dbgh5 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/dbginfo.dir/link.d CMakeFiles/dbginfo.dir/dbginfo.cpp.o -o ../bin/None/dbginfo ../lib/None/libgatbcore.a -ldl -lpthread -lz -lhdf5 make[4]: Leaving directory '/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build' [ 96%] Built target dbginfo [100%] Linking CXX executable mapsembler2_extremities /usr/bin/cmake -E cmake_link_script CMakeFiles/mapsembler2_extremities.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/mapsembler2_extremities.dir/link.d CMakeFiles/mapsembler2_extremities.dir/src/main.cpp.o CMakeFiles/mapsembler2_extremities.dir/src/mapsembler2_extremities.cpp.o -o mapsembler2_extremities ext/gatb-core/lib/None/libgatbcore.a -ldl -lpthread -lz -lhdf5 make[4]: Leaving directory '/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build' [100%] Built target mapsembler2_extremities make[3]: Leaving directory '/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build/CMakeFiles 0 make[2]: Leaving directory '/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extremities/build' dh_auto_build --sourcedirectory=mapsembler2_extend -- k=29 cd mapsembler2_extend && make -j8 INSTALL="install --strip-program=true" k=29 make[2]: Entering directory '/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extend' g++ -o ../minia/Pool.o -c ../minia/Pool.cpp -O3 -lz --std=gnu++0x -DMINIA_IS_IN_PARENT_FOLDER -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extend=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o ../minia/Bank.o -c ../minia/Bank.cpp -O3 -lz --std=gnu++0x -DMINIA_IS_IN_PARENT_FOLDER -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extend=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ ../minia/Bank.cpp: In member function ‘void Bank::init(char**, int)’: ../minia/Bank.cpp:282:19: warning: ignoring return value of ‘char* strerror_r(int, char*, size_t)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 282 | strerror_r( errno, buffer, BUFSIZ ); // get string message from errno | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ ../minia/Bank.cpp: In member function ‘void BinaryBank::open(bool)’: ../minia/Bank.cpp:713:19: warning: ignoring return value of ‘char* strerror_r(int, char*, size_t)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 713 | strerror_r( errno, buffer, BUFSIZ ); // get string message from errno | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ ../minia/Bank.cpp: In member function ‘void BinaryReads::open(bool)’: ../minia/Bank.cpp:798:19: warning: ignoring return value of ‘char* strerror_r(int, char*, size_t)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 798 | strerror_r( errno, buffer, BUFSIZ ); // get string message from errno | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ ../minia/Bank.cpp: In member function ‘int KmersBuffer::readkmers()’: ../minia/Bank.cpp:988:14: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 988 | fread(buffer,sizeof( char),block_size, binary_read_file); // read a block of sequences into the buffer | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o ../minia/Bloom.o -c ../minia/Bloom.cpp -O3 -lz --std=gnu++0x -DMINIA_IS_IN_PARENT_FOLDER -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extend=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ ../minia/Bloom.cpp: In member function ‘void Bloom::load(char*)’: ../minia/Bloom.cpp:256:51: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 256 | printf("loading bloom filter from file, nelem %lli \n",nchar); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li ../minia/Bloom.cpp:257:7: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 257 | fread(blooma, sizeof(unsigned char), nchar, file_data); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o ../minia/Hash16.o -c ../minia/Hash16.cpp -O3 -lz --std=gnu++0x -DMINIA_IS_IN_PARENT_FOLDER -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extend=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o ../minia/Terminator.o -c ../minia/Terminator.cpp -O3 -lz --std=gnu++0x -DMINIA_IS_IN_PARENT_FOLDER -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extend=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ ../minia/Terminator.cpp: In constructor ‘BranchingTerminator::BranchingTerminator(BinaryBank*, uint64_t, Bloom*, Set*)’: ../minia/Terminator.cpp:275:105: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 5 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 275 | fprintf (stderr,"%cExtrapolating the number of branching kmers from the first %dM kmers: %lld",13,(int)ceilf(nb_extrapolation/1024.0/1024.0),estimated_nb_branching_kmers); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | long long int uint64_t {aka long unsigned int} | %ld ../minia/Terminator.cpp:303:89: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 4 has type ‘int64_t’ {aka ‘long int’} [-Wformat=] 303 | if ((nb_branching_kmers%500)==0) fprintf (stderr,"%cIndexing branching kmers %lld / ~%lld",13,nb_branching_kmers,estimated_nb_branching_kmers); | ~~~^ ~~~~~~~~~~~~~~~~~~ | | | | long long int int64_t {aka long int} | %ld ../minia/Terminator.cpp:303:97: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 5 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 303 | if ((nb_branching_kmers%500)==0) fprintf (stderr,"%cIndexing branching kmers %lld / ~%lld",13,nb_branching_kmers,estimated_nb_branching_kmers); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | long long int uint64_t {aka long unsigned int} | %ld ../minia/Terminator.cpp: In constructor ‘BranchingTerminator::BranchingTerminator(BinaryBank*, BinaryBank*, Bloom*, Set*)’: ../minia/Terminator.cpp:337:38: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 3 has type ‘int64_t’ {aka ‘long int’} [-Wformat=] 337 | fprintf (stderr,"\nLoaded %lld branching kmers x %lu B = %.1f MB\n",nb_branching_kmers,sizeof(cell),((1<)*1.0)/1024.0/1024.0); | ~~~^ ~~~~~~~~~~~~~~~~~~ | | | | long long int int64_t {aka long int} | %ld g++ -o ../minia/Kmer.o -c ../minia/Kmer.cpp -O3 -lz --std=gnu++0x -DMINIA_IS_IN_PARENT_FOLDER -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extend=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o ../minia/Traversal.o -c ../minia/Traversal.cpp -O3 -lz --std=gnu++0x -DMINIA_IS_IN_PARENT_FOLDER -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extend=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o ../minia/LinearCounter.o -c ../minia/LinearCounter.cpp -O3 -lz --std=gnu++0x -DMINIA_IS_IN_PARENT_FOLDER -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extend=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o ../minia/Set.o -c ../minia/Set.cpp -O3 -lz --std=gnu++0x -DMINIA_IS_IN_PARENT_FOLDER -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extend=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ ../minia/Set.cpp: In member function ‘void AssocPairedSet::load(char*)’: ../minia/Set.cpp:290:10: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 290 | fread(&liste_value[0], sizeof(pair_nt_kmer_t), liste_value.size(), file_data); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o ../minia/Utils.o -c ../minia/Utils.cpp -O3 -lz --std=gnu++0x -DMINIA_IS_IN_PARENT_FOLDER -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extend=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ ../minia/Utils.cpp: In function ‘uint64_t extrapolate_distinct_kmers_wrapped(long unsigned int, Bank*)’: ../minia/Utils.cpp:434:100: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 4 has type ‘int64_t’ {aka ‘long int’} [-Wformat=] 434 | if ((NbRead%10000)==0) fprintf (stderr,(char*)"%cExtrapolating number of distinct kmers %lld",13,NbRead); | ~~~^ ~~~~~~ | | | | | int64_t {aka long int} | long long int | %ld ../minia/Utils.cpp: In instantiation of ‘Bloom* bloom_create_bloo1(T*, bool) [with T = BloomCpt]’: ../minia/Utils.cpp:167:85: required from here 167 | template Bloom *bloom_create_bloo1(BloomCpt *bloom_counter, bool from_dump); | ^ ../minia/Utils.cpp:121:53: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 121 | printf("load bloom from dump, containing %lli solid kmers b1_size %lli\n",nsolids,b1_size); | ~~~^ ~~~~~~~ | | | | long long int uint64_t {aka long unsigned int} | %li ../minia/Utils.cpp:121:79: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 121 | printf("load bloom from dump, containing %lli solid kmers b1_size %lli\n",nsolids,b1_size); | ~~~^ ~~~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li ../minia/Utils.cpp: In function ‘void end_kmer_count_partition(bool, Hash16*)’: ../minia/Utils.cpp:187:14: warning: ignoring return value of ‘int ftruncate(int, __off_t)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 187 | ftruncate(fileno(F_kmercpt_write), 0); //erase previous file | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ../minia/Utils.cpp:199:14: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 199 | fread(&cptk, sizeof(cptk), 1, F_kmercpt_read); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ../minia/Utils.cpp:225:18: warning: ignoring return value of ‘int ftruncate(int, __off_t)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 225 | ftruncate(fileno(F_kmercpt_read), 0); //erase previous file | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ ../minia/Utils.cpp: In function ‘char* return_file_name(const char*)’: ../minia/Utils.cpp:28:32: warning: ‘__builtin___sprintf_chk’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 28 | sprintf(fileName,"%s.%s",prefix,suffix); | ^ In file included from /usr/include/stdio.h:970, from ../minia/Utils.h:1, from ../minia/Utils.cpp:1: In function ‘int sprintf(char*, const char*, ...)’, inlined from ‘char* return_file_name(const char*)’ at ../minia/Utils.cpp:28:16, inlined from ‘char* return_file_name(const char*)’ at ../minia/Utils.cpp:25:7: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:34: note: ‘__builtin___sprintf_chk’ output 2 or more bytes (assuming 1025) into a destination of size 1024 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ ../minia/Utils.cpp: In function ‘Bloom* bloom_create_bloo1(T*, bool) [with T = BloomCpt]’: ../minia/Utils.cpp:28:32: warning: ‘__builtin___sprintf_chk’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 28 | sprintf(fileName,"%s.%s",prefix,suffix); | ^ In function ‘int sprintf(char*, const char*, ...)’, inlined from ‘char* return_file_name(const char*)’ at ../minia/Utils.cpp:28:16, inlined from ‘char* return_file_name(const char*)’ at ../minia/Utils.cpp:25:7, inlined from ‘Bloom* bloom_create_bloo1(T*, bool) [with T = BloomCpt]’ at ../minia/Utils.cpp:127:22: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:34: note: ‘__builtin___sprintf_chk’ output 2 or more bytes (assuming 1025) into a destination of size 1024 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ ../minia/Utils.cpp: In function ‘Bloom* bloom_create_bloo1(T*, bool) [with T = BloomCpt]’: ../minia/Utils.cpp:28:32: warning: ‘__builtin___sprintf_chk’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 28 | sprintf(fileName,"%s.%s",prefix,suffix); | ^ In function ‘int sprintf(char*, const char*, ...)’, inlined from ‘char* return_file_name(const char*)’ at ../minia/Utils.cpp:28:16, inlined from ‘char* return_file_name(const char*)’ at ../minia/Utils.cpp:25:7, inlined from ‘void bloom_pass_reads_binary(T*, BloomCpt*, char*) [with T = Bloom]’ at ../minia/Utils.cpp:84:29, inlined from ‘Bloom* bloom_create_bloo1(T*, bool) [with T = BloomCpt]’ at ../minia/Utils.cpp:151:32: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:34: note: ‘__builtin___sprintf_chk’ output 2 or more bytes (assuming 1025) into a destination of size 1024 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ ../minia/Utils.cpp: In function ‘Bloom* bloom_create_bloo1(T*, bool) [with T = BloomCpt]’: ../minia/Utils.cpp:28:32: warning: ‘__builtin___sprintf_chk’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 28 | sprintf(fileName,"%s.%s",prefix,suffix); | ^ In function ‘int sprintf(char*, const char*, ...)’, inlined from ‘char* return_file_name(const char*)’ at ../minia/Utils.cpp:28:16, inlined from ‘char* return_file_name(const char*)’ at ../minia/Utils.cpp:25:7, inlined from ‘Bloom* bloom_create_bloo1(T*, bool) [with T = BloomCpt]’ at ../minia/Utils.cpp:148:20: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:34: note: ‘__builtin___sprintf_chk’ output 2 or more bytes (assuming 1025) into a destination of size 1024 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ ../minia/Utils.cpp: In function ‘void end_kmer_count_partition(bool, Hash16*)’: ../minia/Utils.cpp:28:32: warning: ‘__builtin___sprintf_chk’ may write a terminating nul past the end of the destination [-Wformat-overflow=] 28 | sprintf(fileName,"%s.%s",prefix,suffix); | ^ In function ‘int sprintf(char*, const char*, ...)’, inlined from ‘char* return_file_name(const char*)’ at ../minia/Utils.cpp:28:16, inlined from ‘char* return_file_name(const char*)’ at ../minia/Utils.cpp:25:7, inlined from ‘void end_kmer_count_partition(bool, Hash16*)’ at ../minia/Utils.cpp:196:91: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:34: note: ‘__builtin___sprintf_chk’ output 2 or more bytes (assuming 1025) into a destination of size 1024 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ g++ -o ../minia/SortingCount.o -c ../minia/SortingCount.cpp -O3 -lz --std=gnu++0x -DMINIA_IS_IN_PARENT_FOLDER -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extend=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ ../minia/SortingCount.cpp: In function ‘void sorting_count(Bank*, char*, int, int, bool, int, bool)’: ../minia/SortingCount.cpp:56:15: warning: ignoring return value of ‘char* getcwd(char*, size_t)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 56 | getcwd(current_path,sizeof(current_path)); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ../minia/SortingCount.cpp:283:15: warning: ignoring return value of ‘int system(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 283 | system("echo 3 > /proc/sys/vm/drop_caches"); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ../minia/SortingCount.cpp:537:19: warning: ignoring return value of ‘int system(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 537 | system("echo 3 > /proc/sys/vm/drop_caches"); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o ../minia/Debloom.o -c ../minia/Debloom.cpp -O3 -lz --std=gnu++0x -DMINIA_IS_IN_PARENT_FOLDER -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extend=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial ../minia/SortingCount.cpp:45:25: warning: ‘%s’ directive writing up to 1023 bytes into a region of size 512 [-Wformat-overflow=] 45 | sprintf(p_buf, "%s/%s", temp_dir, ep->d_name); | ^~ ~~~~~~~~ In file included from /usr/include/stdio.h:970, from ../minia/SortingCount.h:1, from ../minia/SortingCount.cpp:1: In function ‘int sprintf(char*, const char*, ...)’, inlined from ‘void sorting_count(Bank*, char*, int, int, bool, int, bool)’ at ../minia/SortingCount.cpp:45:16: /usr/include/aarch64-linux-gnu/bits/stdio2.h:30:34: note: ‘__builtin___sprintf_chk’ output between 2 and 1280 bytes into a destination of size 512 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ ../minia/Debloom.cpp: In function ‘int debloom(int, int)’: ../minia/Debloom.cpp:154:89: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 4 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 154 | if ((NbSolidKmer%10000)==0) fprintf (stderr,"%c Writing positive Bloom Kmers %lld",13,NbSolidKmer); | ~~~^ ~~~~~~~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %ld ../minia/Debloom.cpp:158:26: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 158 | fprintf(stderr,"\n%lli kmers written\n",cc); | ~~~^ ~~ | | | | long long int uint64_t {aka long unsigned int} | %li ../minia/Debloom.cpp:191:76: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 4 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 191 | if ((NbSolidKmer%10000)==0) fprintf (stderr,"%cBuild Hash table %lld",13,NbSolidKmer); | ~~~^ ~~~~~~~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %ld ../minia/Debloom.cpp:195:58: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 195 | fprintf(stderr,"End of debloom partition %lli / %lld \n",hasht1->nb_elem,max_kmer_per_part); | ~~~^ ~~~~~~~~~~~~~~~ | | | | long long int uint64_t {aka long unsigned int} | %li ../minia/Debloom.cpp:195:65: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 4 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 195 | fprintf(stderr,"End of debloom partition %lli / %lld \n",hasht1->nb_elem,max_kmer_per_part); | ~~~^ ~~~~~~~~~~~~~~~~~ | | | | long long int uint64_t {aka long unsigned int} | %ld ../minia/Debloom.cpp:208:34: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 208 | fprintf(stderr,"\n%lli false positives written , partition %i \n",n_false_positives,numpart); | ~~~^ ~~~~~~~~~~~~~~~~~ | | | | long long int uint64_t {aka long unsigned int} | %li ../minia/Debloom.cpp:225:81: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 225 | fprintf(stderr,"Total nb false positives stored in the Debloom hashtable %lli \n",n_false_positives); | ~~~^ ~~~~~~~~~~~~~~~~~ | | | | | uint64_t {aka long unsigned int} | long long int | %li ../minia/Debloom.cpp: In function ‘Set* load_false_positives()’: ../minia/Debloom.cpp:280:112: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 4 has type ‘int64_t’ {aka ‘long int’} [-Wformat=] 280 | if ((NbInsertedKmers%10000)==0) fprintf (stderr,(char*)"%cInsert false positive Kmers in hash table %lld",13,NbInsertedKmers); | ~~~^ ~~~~~~~~~~~~~~~ | | | | | int64_t {aka long int} | long long int | %ld ../minia/Debloom.cpp:284:36: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 3 has type ‘int64_t’ {aka ‘long int’} [-Wformat=] 284 | fprintf (stderr,"\nInserted %lld false positive kmers in the hash structure.\n\n",NbInsertedKmers); | ~~~^ ~~~~~~~~~~~~~~~ | | | | long long int int64_t {aka long int} | %ld ../minia/Debloom.cpp: In function ‘void print_size_summary(FPSet*)’: ../minia/Debloom.cpp:445:50: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 445 | fprintf(stderr, "Size of the FP table : %lli FP x %d bits = %.2lf MB \n", fp->capacity(), bits_per_FP_element, toMB((double)(size_T1)) ); | ~~~^ ~~~~~~~~~~~~~~ | | | | long long int uint64_t {aka long unsigned int} | %li ../minia/Debloom.cpp:448:47: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 4 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 448 | fprintf(stderr," Total %.2lf MB for %lld solid kmers ==> %.2lf bits / solid kmer\n\n", toMB(total_size), nbkmers_solid, total_size / nbkmers_solid); | ~~~^ ~~~~~~~~~~~~~ | | | | long long int uint64_t {aka long unsigned int} | %ld ../minia/Debloom.cpp: In function ‘void print_size_summary(FPSetCascading4*)’: ../minia/Debloom.cpp:465:47: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 4 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 465 | fprintf(stderr," Total %.2lf MB for %lld solid kmers ==> %.2lf bits / solid kmer\n\n", toMB(total_size), nbkmers_solid, total_size / nbkmers_solid); | ~~~^ ~~~~~~~~~~~~~ | | | | long long int uint64_t {aka long unsigned int} | %ld ../minia/Debloom.cpp: In function ‘void end_debloom_partition(bool)’: ../minia/Debloom.cpp:29:18: warning: ignoring return value of ‘int ftruncate(int, __off_t)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 29 | ftruncate(fileno(F_debloom_write), 0); //erase previous file | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o ../minia/OAHash.o -c ../minia/OAHash.cpp -O3 -lz --std=gnu++0x -DMINIA_IS_IN_PARENT_FOLDER -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extend=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o commons.o -c commons.cpp -O3 -lz --std=gnu++0x -DMINIA_IS_IN_PARENT_FOLDER -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extend=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o IterativeExtensions.o -c IterativeExtensions.cpp -O3 -lz --std=gnu++0x -DMINIA_IS_IN_PARENT_FOLDER -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extend=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o Fragment_Bank.o -c Fragment_Bank.cpp -O3 -lz --std=gnu++0x -DMINIA_IS_IN_PARENT_FOLDER -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extend=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o Fragment.o -c Fragment.cpp -O3 -lz --std=gnu++0x -DMINIA_IS_IN_PARENT_FOLDER -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extend=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o GraphOutput.o -c GraphOutput.cpp -O3 -lz --std=gnu++0x -DMINIA_IS_IN_PARENT_FOLDER -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extend=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mapsembler_extend ../minia/Pool.o ../minia/Bank.o ../minia/Bloom.o ../minia/Hash16.o ../minia/Terminator.o ../minia/Kmer.o ../minia/Traversal.o ../minia/LinearCounter.o ../minia/Set.o ../minia/Utils.o ../minia/SortingCount.o ../minia/Debloom.o ../minia/OAHash.o commons.o IterativeExtensions.o Fragment_Bank.o Fragment.o GraphOutput.o mapsembler_extend.cpp -O3 -lz --std=gnu++0x -DMINIA_IS_IN_PARENT_FOLDER -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extend=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ mapsembler_extend.cpp: In function ‘int main(int, char**)’: mapsembler_extend.cpp:145:50: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 2 has type ‘int64_t’ {aka ‘long int’} [-Wformat=] 145 | printf(" Will use genome_size=%llu\n", genome_size); //TODO format | ~~~^ ~~~~~~~~~~~ | | | | | int64_t {aka long int} | long long unsigned int | %lu mapsembler_extend.cpp:320:76: warning: ignoring return value of ‘int system(const char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 320 | command = string("rm -f ")+string(prefix_trashable)+string("*"); system((char *)command.c_str()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/build/reproducible-path/mapsembler2-2.2.4+dfsg1/mapsembler2_extend' dh_auto_build --sourcedirectory=kissreads_graph -- k=29 cd kissreads_graph && make -j8 INSTALL="install --strip-program=true" k=29 make[2]: Entering directory '/build/reproducible-path/mapsembler2-2.2.4+dfsg1/kissreads_graph' g++ -o block_allocator.o -c block_allocator.cpp -O3 -L../thirdparty/zlib/build -lz -DMINIA_IS_IN_PARENT_FOLDER -D_FILE_OFFSET_BITS=64 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1/kissreads_graph=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -lz -DMINIA_IS_IN_PARENT_FOLDER -D_FILE_OFFSET_BITS=64 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o DeBruijnGraph.o -c DeBruijnGraph.cpp -O3 -L../thirdparty/zlib/build -lz -DMINIA_IS_IN_PARENT_FOLDER -D_FILE_OFFSET_BITS=64 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1/kissreads_graph=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -lz -DMINIA_IS_IN_PARENT_FOLDER -D_FILE_OFFSET_BITS=64 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ DeBruijnGraph.cpp: In member function ‘void DBG::index_nodes()’: DeBruijnGraph.cpp:952:41: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 952 | printf("total seeds in fragments %lli size %lli MB \n",total_seeds,total_seeds*sizeof(couple)/1024LL/1024LL); | ~~~^ ~~~~~~~~~~~ | | | | long long int uint64_t {aka long unsigned int} | %li g++ -o Fragment.o -c Fragment.cpp -O3 -L../thirdparty/zlib/build -lz -DMINIA_IS_IN_PARENT_FOLDER -D_FILE_OFFSET_BITS=64 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1/kissreads_graph=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -lz -DMINIA_IS_IN_PARENT_FOLDER -D_FILE_OFFSET_BITS=64 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o json.o -c json.cpp -O3 -L../thirdparty/zlib/build -lz -DMINIA_IS_IN_PARENT_FOLDER -D_FILE_OFFSET_BITS=64 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1/kissreads_graph=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -lz -DMINIA_IS_IN_PARENT_FOLDER -D_FILE_OFFSET_BITS=64 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o read_coherence_mapsembler/libchash.o -c read_coherence_mapsembler/libchash.cpp -O3 -L../thirdparty/zlib/build -lz -DMINIA_IS_IN_PARENT_FOLDER -D_FILE_OFFSET_BITS=64 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1/kissreads_graph=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -lz -DMINIA_IS_IN_PARENT_FOLDER -D_FILE_OFFSET_BITS=64 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ read_coherence_mapsembler/libchash.cpp: In function ‘HTItem* HashFind(HashTable*, u_long)’: read_coherence_mapsembler/libchash.cpp:199:12: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 199 | fread(&_ul, sizeof(_ul), 1, (fp)); \ | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ read_coherence_mapsembler/libchash.cpp:226:7: note: in expansion of macro ‘READ_UL’ 226 | READ_UL((ht)->fpData, cchData); \ | ^~~~~~~ read_coherence_mapsembler/libchash.cpp:1227:3: note: in expansion of macro ‘LOAD_AND_RETURN’ 1227 | LOAD_AND_RETURN(ht, Find(ht, KEY_TRUNC(ht, key), NULL)); | ^~~~~~~~~~~~~~~ read_coherence_mapsembler/libchash.cpp: In function ‘HTItem* HashFindLast(HashTable*)’: read_coherence_mapsembler/libchash.cpp:199:12: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 199 | fread(&_ul, sizeof(_ul), 1, (fp)); \ | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ read_coherence_mapsembler/libchash.cpp:226:7: note: in expansion of macro ‘READ_UL’ 226 | READ_UL((ht)->fpData, cchData); \ | ^~~~~~~ read_coherence_mapsembler/libchash.cpp:1232:4: note: in expansion of macro ‘LOAD_AND_RETURN’ 1232 | LOAD_AND_RETURN(ht, ht->posLastFind); | ^~~~~~~~~~~~~~~ read_coherence_mapsembler/libchash.cpp: In function ‘HTItem* HashFirstBucket(HashTable*)’: read_coherence_mapsembler/libchash.cpp:199:12: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 199 | fread(&_ul, sizeof(_ul), 1, (fp)); \ | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ read_coherence_mapsembler/libchash.cpp:226:7: note: in expansion of macro ‘READ_UL’ 226 | READ_UL((ht)->fpData, cchData); \ | ^~~~~~~ read_coherence_mapsembler/libchash.cpp:1296:10: note: in expansion of macro ‘LOAD_AND_RETURN’ 1296 | LOAD_AND_RETURN(ht, retval); | ^~~~~~~~~~~~~~~ read_coherence_mapsembler/libchash.cpp: In function ‘HTItem* HashNextBucket(HashTable*)’: read_coherence_mapsembler/libchash.cpp:199:12: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 199 | fread(&_ul, sizeof(_ul), 1, (fp)); \ | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ read_coherence_mapsembler/libchash.cpp:226:7: note: in expansion of macro ‘READ_UL’ 226 | READ_UL((ht)->fpData, cchData); \ | ^~~~~~~ read_coherence_mapsembler/libchash.cpp:1306:10: note: in expansion of macro ‘LOAD_AND_RETURN’ 1306 | LOAD_AND_RETURN(ht, retval); | ^~~~~~~~~~~~~~~ read_coherence_mapsembler/libchash.cpp: In function ‘HashTable* HashDoLoad(FILE*, char* (*)(FILE*, int), HashTable*)’: read_coherence_mapsembler/libchash.cpp:1413:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1413 | fread(szMagicKey, 1, 4, fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~ read_coherence_mapsembler/libchash.cpp:199:12: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 199 | fread(&_ul, sizeof(_ul), 1, (fp)); \ | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ read_coherence_mapsembler/libchash.cpp:1422:4: note: in expansion of macro ‘READ_UL’ 1422 | READ_UL(fp, ht->cchKey); | ^~~~~~~ read_coherence_mapsembler/libchash.cpp:199:12: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 199 | fread(&_ul, sizeof(_ul), 1, (fp)); \ | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ read_coherence_mapsembler/libchash.cpp:1423:4: note: in expansion of macro ‘READ_UL’ 1423 | READ_UL(fp, ht->cItems); | ^~~~~~~ read_coherence_mapsembler/libchash.cpp:199:12: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 199 | fread(&_ul, sizeof(_ul), 1, (fp)); \ | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ read_coherence_mapsembler/libchash.cpp:1424:4: note: in expansion of macro ‘READ_UL’ 1424 | READ_UL(fp, ht->cDeletedItems); | ^~~~~~~ read_coherence_mapsembler/libchash.cpp:199:12: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 199 | fread(&_ul, sizeof(_ul), 1, (fp)); \ | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ read_coherence_mapsembler/libchash.cpp:1427:4: note: in expansion of macro ‘READ_UL’ 1427 | READ_UL(fp, cchKey); | ^~~~~~~ read_coherence_mapsembler/libchash.cpp:1429:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1429 | fread(rgchKeys, 1, cchKey, fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ read_coherence_mapsembler/libchash.cpp:199:12: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 199 | fread(&_ul, sizeof(_ul), 1, (fp)); \ | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ read_coherence_mapsembler/libchash.cpp:1434:7: note: in expansion of macro ‘READ_UL’ 1434 | READ_UL(fp, bck->data); /* all we need if dataRead is NULL */ | ^~~~~~~ read_coherence_mapsembler/libchash.cpp: In function ‘u_long SparseRead(FILE*, SparseBin**)’: read_coherence_mapsembler/libchash.cpp:199:12: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 199 | fread(&_ul, sizeof(_ul), 1, (fp)); \ | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ read_coherence_mapsembler/libchash.cpp:628:4: note: in expansion of macro ‘READ_UL’ 628 | READ_UL(fp, cBuckets); /* actually, cBuckets is stored */ | ^~~~~~~ read_coherence_mapsembler/libchash.cpp:199:12: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 199 | fread(&_ul, sizeof(_ul), 1, (fp)); \ | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ read_coherence_mapsembler/libchash.cpp:633:10: note: in expansion of macro ‘READ_UL’ 633 | READ_UL(fp, (*pbinSparse)[i].bmOccupied[j]); | ^~~~~~~ g++ -o read_coherence_mapsembler/couple.o -c read_coherence_mapsembler/couple.cpp -O3 -L../thirdparty/zlib/build -lz -DMINIA_IS_IN_PARENT_FOLDER -D_FILE_OFFSET_BITS=64 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1/kissreads_graph=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -lz -DMINIA_IS_IN_PARENT_FOLDER -D_FILE_OFFSET_BITS=64 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o read_coherence_mapsembler/misc_tools.o -c read_coherence_mapsembler/misc_tools.cpp -O3 -L../thirdparty/zlib/build -lz -DMINIA_IS_IN_PARENT_FOLDER -D_FILE_OFFSET_BITS=64 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1/kissreads_graph=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -lz -DMINIA_IS_IN_PARENT_FOLDER -D_FILE_OFFSET_BITS=64 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o read_coherence_mapsembler/read_groups.o -c read_coherence_mapsembler/read_groups.cpp -O3 -L../thirdparty/zlib/build -lz -DMINIA_IS_IN_PARENT_FOLDER -D_FILE_OFFSET_BITS=64 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1/kissreads_graph=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -lz -DMINIA_IS_IN_PARENT_FOLDER -D_FILE_OFFSET_BITS=64 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o read_coherence_mapsembler/consensus_common.o -c read_coherence_mapsembler/consensus_common.cpp -O3 -L../thirdparty/zlib/build -lz -DMINIA_IS_IN_PARENT_FOLDER -D_FILE_OFFSET_BITS=64 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1/kissreads_graph=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -lz -DMINIA_IS_IN_PARENT_FOLDER -D_FILE_OFFSET_BITS=64 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o read_coherence_mapsembler/list.o -c read_coherence_mapsembler/list.cpp -O3 -L../thirdparty/zlib/build -lz -DMINIA_IS_IN_PARENT_FOLDER -D_FILE_OFFSET_BITS=64 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1/kissreads_graph=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -lz -DMINIA_IS_IN_PARENT_FOLDER -D_FILE_OFFSET_BITS=64 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o read_coherence_mapsembler/read_coherence.o -c read_coherence_mapsembler/read_coherence.cpp -O3 -L../thirdparty/zlib/build -lz -DMINIA_IS_IN_PARENT_FOLDER -D_FILE_OFFSET_BITS=64 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1/kissreads_graph=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -lz -DMINIA_IS_IN_PARENT_FOLDER -D_FILE_OFFSET_BITS=64 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ read_coherence_mapsembler/read_coherence.cpp: In function ‘char** read_coherent_homologs(hash_t, const char*, int, int, int, int, int*)’: read_coherence_mapsembler/read_coherence.cpp:988:39: warning: format ‘%X’ expects argument of type ‘unsigned int’, but argument 3 has type ‘group_t’ {aka ‘list_*’} [-Wformat=] 988 | "error group %X: recomputed number of substitutions (%d) not matching dynamic number of substitutions (%d) (so i'm glad i coded this test)\n fragment: %s\nconsensus:%s\n", | ~^ | | | unsigned int 989 | current_read_group, number_substitutions, | ~~~~~~~~~~~~~~~~~~ | | | group_t {aka list_*} read_coherence_mapsembler/read_coherence.cpp:1002:39: warning: format ‘%X’ expects argument of type ‘unsigned int’, but argument 3 has type ‘group_t’ {aka ‘list_*’} [-Wformat=] 1002 | "error group %X: recomputed consensus (%s) not matching dynamic consensus (%s) (so i'm glad i coded this test)\n fragment: %s\n", | ~^ | | | unsigned int 1003 | current_read_group, substarters[*nb_consensuses], | ~~~~~~~~~~~~~~~~~~ | | | group_t {aka list_*} g++ -o read_coherence_mapsembler/interface_libchash.o -c read_coherence_mapsembler/interface_libchash.cpp -O3 -L../thirdparty/zlib/build -lz -DMINIA_IS_IN_PARENT_FOLDER -D_FILE_OFFSET_BITS=64 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1/kissreads_graph=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -lz -DMINIA_IS_IN_PARENT_FOLDER -D_FILE_OFFSET_BITS=64 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ read_coherence_mapsembler/interface_libchash.cpp: In function ‘void iterate_and_fill_offsets(hash_t)’: read_coherence_mapsembler/interface_libchash.cpp:408:36: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 408 | printf("total nb diff seeds %lli (should use %lli MB) \n",nbdiffseeds,(nbdiffseeds*16)/1024/1024); | ~~~^ ~~~~~~~~~~~ | | | | long long int uint64_t {aka long unsigned int} | %li read_coherence_mapsembler/interface_libchash.cpp:408:54: warning: format ‘%lli’ expects argument of type ‘long long int’, but argument 3 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 408 | printf("total nb diff seeds %lli (should use %lli MB) \n",nbdiffseeds,(nbdiffseeds*16)/1024/1024); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | long long int uint64_t {aka long unsigned int} | %li g++ -o commons.o -c commons.cpp -O3 -L../thirdparty/zlib/build -lz -DMINIA_IS_IN_PARENT_FOLDER -D_FILE_OFFSET_BITS=64 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1/kissreads_graph=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -lz -DMINIA_IS_IN_PARENT_FOLDER -D_FILE_OFFSET_BITS=64 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o Loader.o -c Loader.cpp -O3 -L../thirdparty/zlib/build -lz -DMINIA_IS_IN_PARENT_FOLDER -D_FILE_OFFSET_BITS=64 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1/kissreads_graph=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -lz -DMINIA_IS_IN_PARENT_FOLDER -D_FILE_OFFSET_BITS=64 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o ReadMapper.o -c ReadMapper.cpp -O3 -L../thirdparty/zlib/build -lz -DMINIA_IS_IN_PARENT_FOLDER -D_FILE_OFFSET_BITS=64 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1/kissreads_graph=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -lz -DMINIA_IS_IN_PARENT_FOLDER -D_FILE_OFFSET_BITS=64 cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ ReadMapper.cpp: In function ‘uint64_t map_reads(Bank*, std::vector)’: ReadMapper.cpp:38:31: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 38 | printf("\r %lld read%s mapped among %lld read%s tested", number_mapped, number_mapped>1?"s":"", number_tested, number_tested>1?"s":""); | ~~~^ ~~~~~~~~~~~~~ | | | | long long int uint64_t {aka long unsigned int} | %ld ReadMapper.cpp:38:56: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 4 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 38 | printf("\r %lld read%s mapped among %lld read%s tested", number_mapped, number_mapped>1?"s":"", number_tested, number_tested>1?"s":""); | ~~~^ ~~~~~~~~~~~~~ | | | | long long int uint64_t {aka long unsigned int} | %ld ReadMapper.cpp:240:23: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 2 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 240 | printf("\r %lld read%s mapped among %lld read%s tested", number_mapped, number_mapped>1?"s":"", number_tested, number_tested>1?"s":""); | ~~~^ ~~~~~~~~~~~~~ | | | | long long int uint64_t {aka long unsigned int} | %ld ReadMapper.cpp:240:48: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 4 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 240 | printf("\r %lld read%s mapped among %lld read%s tested", number_mapped, number_mapped>1?"s":"", number_tested, number_tested>1?"s":""); | ~~~^ ~~~~~~~~~~~~~ | | | | long long int uint64_t {aka long unsigned int} | %ld g++ -o kissreads_graph block_allocator.o DeBruijnGraph.o Fragment.o json.o read_coherence_mapsembler/libchash.o read_coherence_mapsembler/couple.o read_coherence_mapsembler/misc_tools.o read_coherence_mapsembler/read_groups.o read_coherence_mapsembler/consensus_common.o read_coherence_mapsembler/list.o read_coherence_mapsembler/read_coherence.o read_coherence_mapsembler/interface_libchash.o commons.o ../minia/Kmer.o ../minia/Bank.o Loader.o ReadMapper.o KissReadsGraph.cpp -O3 -L../thirdparty/zlib/build -lz -DMINIA_IS_IN_PARENT_FOLDER -D_FILE_OFFSET_BITS=64 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1/kissreads_graph=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -lz -DMINIA_IS_IN_PARENT_FOLDER -D_FILE_OFFSET_BITS=64 -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ make[2]: Leaving directory '/build/reproducible-path/mapsembler2-2.2.4+dfsg1/kissreads_graph' dh_auto_build --sourcedirectory=kissreads -- k=29 cd kissreads && make -j8 INSTALL="install --strip-program=true" k=29 make[2]: Entering directory '/build/reproducible-path/mapsembler2-2.2.4+dfsg1/kissreads' gcc -o src/coherent_algorithm.o -c src/coherent_algorithm.c -O3 -lz -fopenmp -DOMP -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1/kissreads=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -lz -I./include/ gcc -o src/commons.o -c src/commons.c -O3 -lz -fopenmp -DOMP -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1/kissreads=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -lz -I./include/ gcc -o src/couple.o -c src/couple.c -O3 -lz -fopenmp -DOMP -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1/kissreads=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -lz -I./include/ gcc -o src/extension_algorithm.o -c src/extension_algorithm.c -O3 -lz -fopenmp -DOMP -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1/kissreads=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -lz -I./include/ gcc -o src/fragment_index.o -c src/fragment_index.c -O3 -lz -fopenmp -DOMP -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1/kissreads=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -lz -I./include/ gcc -o src/kissReads.o -c src/kissReads.c -O3 -lz -fopenmp -DOMP -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1/kissreads=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -lz -I./include/ gcc -o src/list.o -c src/list.c -O3 -lz -fopenmp -DOMP -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1/kissreads=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -lz -I./include/ gcc -o src/outputs.o -c src/outputs.c -O3 -lz -fopenmp -DOMP -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1/kissreads=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -lz -I./include/ gcc -o src/interface_libchash.o -c src/interface_libchash.c -O3 -lz -fopenmp -DOMP -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1/kissreads=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -lz -I./include/ gcc -o src/libchash.o -c src/libchash.c -O3 -lz -fopenmp -DOMP -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/mapsembler2-2.2.4+dfsg1/kissreads=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -O3 -lz -I./include/ src/libchash.c: In function ‘HashFind’: src/libchash.c:193:7: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 193 | fread(&_ul, sizeof(_ul), 1, (fp)); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/libchash.c:220:7: note: in expansion of macro ‘READ_UL’ 220 | READ_UL((ht)->fpData, cchData); \ | ^~~~~~~ src/libchash.c:1221:4: note: in expansion of macro ‘LOAD_AND_RETURN’ 1221 | LOAD_AND_RETURN(ht, Find(ht, KEY_TRUNC(ht, key), NULL)); | ^~~~~~~~~~~~~~~ src/libchash.c: In function ‘HashFindLast’: src/libchash.c:193:7: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 193 | fread(&_ul, sizeof(_ul), 1, (fp)); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/libchash.c:220:7: note: in expansion of macro ‘READ_UL’ 220 | READ_UL((ht)->fpData, cchData); \ | ^~~~~~~ src/libchash.c:1226:4: note: in expansion of macro ‘LOAD_AND_RETURN’ 1226 | LOAD_AND_RETURN(ht, ht->posLastFind); | ^~~~~~~~~~~~~~~ src/libchash.c: In function ‘HashFirstBucket’: src/libchash.c:193:7: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 193 | fread(&_ul, sizeof(_ul), 1, (fp)); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/libchash.c:220:7: note: in expansion of macro ‘READ_UL’ 220 | READ_UL((ht)->fpData, cchData); \ | ^~~~~~~ src/libchash.c:1290:10: note: in expansion of macro ‘LOAD_AND_RETURN’ 1290 | LOAD_AND_RETURN(ht, retval); | ^~~~~~~~~~~~~~~ src/libchash.c: In function ‘HashNextBucket’: src/libchash.c:193:7: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 193 | fread(&_ul, sizeof(_ul), 1, (fp)); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/libchash.c:220:7: note: in expansion of macro ‘READ_UL’ 220 | READ_UL((ht)->fpData, cchData); \ | ^~~~~~~ src/libchash.c:1300:10: note: in expansion of macro ‘LOAD_AND_RETURN’ 1300 | LOAD_AND_RETURN(ht, retval); | ^~~~~~~~~~~~~~~ src/libchash.c: In function ‘HashDoLoad’: src/libchash.c:1407:4: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1407 | fread(szMagicKey, 1, 4, fp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ src/libchash.c:193:7: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 193 | fread(&_ul, sizeof(_ul), 1, (fp)); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/libchash.c:1416:4: note: in expansion of macro ‘READ_UL’ 1416 | READ_UL(fp, ht->cchKey); | ^~~~~~~ src/libchash.c:193:7: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 193 | fread(&_ul, sizeof(_ul), 1, (fp)); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/libchash.c:1417:4: note: in expansion of macro ‘READ_UL’ 1417 | READ_UL(fp, ht->cItems); | ^~~~~~~ src/libchash.c:193:7: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 193 | fread(&_ul, sizeof(_ul), 1, (fp)); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/libchash.c:1418:4: note: in expansion of macro ‘READ_UL’ 1418 | READ_UL(fp, ht->cDeletedItems); | ^~~~~~~ src/libchash.c:193:7: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 193 | fread(&_ul, sizeof(_ul), 1, (fp)); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/libchash.c:1421:4: note: in expansion of macro ‘READ_UL’ 1421 | READ_UL(fp, cchKey); | ^~~~~~~ src/libchash.c:1423:4: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1423 | fread(rgchKeys, 1, cchKey, fp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/libchash.c:193:7: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 193 | fread(&_ul, sizeof(_ul), 1, (fp)); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/libchash.c:1428:7: note: in expansion of macro ‘READ_UL’ 1428 | READ_UL(fp, bck->data); /* all we need if dataRead is NULL */ | ^~~~~~~ src/libchash.c: In function ‘SparseRead’: src/libchash.c:193:7: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 193 | fread(&_ul, sizeof(_ul), 1, (fp)); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/libchash.c:622:4: note: in expansion of macro ‘READ_UL’ 622 | READ_UL(fp, cBuckets); /* actually, cBuckets is stored */ | ^~~~~~~ src/libchash.c:193:7: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 193 | fread(&_ul, sizeof(_ul), 1, (fp)); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/libchash.c:627:10: note: in expansion of macro ‘READ_UL’ 627 | READ_UL(fp, (*pbinSparse)[i].bmOccupied[j]); | ^~~~~~~ gcc -o kissreads src/coherent_algorithm.o src/commons.o src/couple.o src/extension_algorithm.o src/fragment_index.o src/kissReads.o src/list.o src/outputs.o src/interface_libchash.o src/libchash.o -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -lm -O3 -lz -lgomp ################# # Compilation OK# ################# make[2]: Leaving directory '/build/reproducible-path/mapsembler2-2.2.4+dfsg1/kissreads' make[1]: Leaving directory '/build/reproducible-path/mapsembler2-2.2.4+dfsg1' create-stamp debian/debhelper-build-stamp dh_prep -a dh_auto_install --destdir=debian/mapsembler2/ -a debian/rules override_dh_install make[1]: Entering directory '/build/reproducible-path/mapsembler2-2.2.4+dfsg1' mv ./kissreads/kissreads ./kissreads/mapsembler2_kissreads mv ./kissreads_graph/kissreads_graph ./kissreads_graph/mapsembler2_kissreads_graph cp run_mapsembler2_pipeline.sh run_mapsembler2_pipeline dh_install make[1]: Leaving directory '/build/reproducible-path/mapsembler2-2.2.4+dfsg1' dh_installdocs -a dh_installchangelogs -a dh_installexamples -a dh_installman -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-aarch64.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'mapsembler2-dbgsym' in '../mapsembler2-dbgsym_2.2.4+dfsg1-5_arm64.deb'. dpkg-deb: building package 'mapsembler2' in '../mapsembler2_2.2.4+dfsg1-5_arm64.deb'. dpkg-genbuildinfo --build=any -O../mapsembler2_2.2.4+dfsg1-5_arm64.buildinfo dpkg-genchanges --build=any -O../mapsembler2_2.2.4+dfsg1-5_arm64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2025-11-29T11:26:06Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes Sat, 29 Nov 2025 11:26:07 +0000 | +------------------------------------------------------------------------------+ mapsembler2_2.2.4+dfsg1-5_arm64.changes: ---------------------------------------- Format: 1.8 Date: Sat, 18 Oct 2025 22:45:15 +0200 Source: mapsembler2 Binary: mapsembler2 mapsembler2-dbgsym Architecture: arm64 Version: 2.2.4+dfsg1-5 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: mapsembler2 - bioinformatics targeted assembly software Closes: 1113267 Changes: mapsembler2 (2.2.4+dfsg1-5) unstable; urgency=medium . * Fix build using CMake 4 Closes: #1113267 * d/watch: version=5 * Standards-Version: 4.7.2 (routine-update) * debputy lint --auto-fix (routine-update) Checksums-Sha1: 1d100d1df1e77d6dfed14c4116aaca6ba8068c69 2483568 mapsembler2-dbgsym_2.2.4+dfsg1-5_arm64.deb 44ba8b3c94d5546fa9eee339cecc44d1d567d82f 7707 mapsembler2_2.2.4+dfsg1-5_arm64.buildinfo 7140315215f9558d3951e4b50651ebea7380db8a 711776 mapsembler2_2.2.4+dfsg1-5_arm64.deb Checksums-Sha256: eeb4d359ac1accb5536a6fb68c8833f8eba6fd9e1ac3c1459cd4ec8e69215e74 2483568 mapsembler2-dbgsym_2.2.4+dfsg1-5_arm64.deb f5596f232af34bd8e90a52d9c1d88452524e0777e8f4e9d1f9d0d7b248b20379 7707 mapsembler2_2.2.4+dfsg1-5_arm64.buildinfo d9efef69ab5b38be014bb6cb96d668d2786a0df42ae00ba8625cc65c8f3afa27 711776 mapsembler2_2.2.4+dfsg1-5_arm64.deb Files: a2d43cd880625bf3fcf79566c7c0483e 2483568 debug optional mapsembler2-dbgsym_2.2.4+dfsg1-5_arm64.deb 91ed63de7332168de9eda826f1c894a7 7707 science optional mapsembler2_2.2.4+dfsg1-5_arm64.buildinfo 678f24205d9fa5dd68c4c0953bd5e5a6 711776 science optional mapsembler2_2.2.4+dfsg1-5_arm64.deb +------------------------------------------------------------------------------+ | Buildinfo Sat, 29 Nov 2025 11:26:08 +0000 | +------------------------------------------------------------------------------+ Format: 1.0 Source: mapsembler2 Binary: mapsembler2 mapsembler2-dbgsym Architecture: arm64 Version: 2.2.4+dfsg1-5 Checksums-Md5: a2d43cd880625bf3fcf79566c7c0483e 2483568 mapsembler2-dbgsym_2.2.4+dfsg1-5_arm64.deb 678f24205d9fa5dd68c4c0953bd5e5a6 711776 mapsembler2_2.2.4+dfsg1-5_arm64.deb Checksums-Sha1: 1d100d1df1e77d6dfed14c4116aaca6ba8068c69 2483568 mapsembler2-dbgsym_2.2.4+dfsg1-5_arm64.deb 7140315215f9558d3951e4b50651ebea7380db8a 711776 mapsembler2_2.2.4+dfsg1-5_arm64.deb Checksums-Sha256: eeb4d359ac1accb5536a6fb68c8833f8eba6fd9e1ac3c1459cd4ec8e69215e74 2483568 mapsembler2-dbgsym_2.2.4+dfsg1-5_arm64.deb d9efef69ab5b38be014bb6cb96d668d2786a0df42ae00ba8625cc65c8f3afa27 711776 mapsembler2_2.2.4+dfsg1-5_arm64.deb Build-Origin: Debian Build-Architecture: arm64 Build-Date: Sat, 29 Nov 2025 11:26:06 +0000 Build-Path: /build/reproducible-path/mapsembler2-2.2.4+dfsg1 Installed-Build-Depends: autoconf (= 2.72-3.1), automake (= 1:1.18.1-2), autopoint (= 0.23.1-2), autotools-dev (= 20240727.1), base-files (= 14), base-passwd (= 3.6.7), bash (= 5.3-1), bc (= 1.07.1-4+b1), binutils (= 2.45-7), binutils-aarch64-linux-gnu (= 2.45-7), binutils-common (= 2.45-7), bsdextrautils (= 2.41.2-4), build-essential (= 12.12), bzip2 (= 1.0.8-6), cmake (= 4.1.1+really3.31.6-2), cmake-data (= 4.1.1+really3.31.6-2), comerr-dev (= 2.1-1.47.2-3+b3), coreutils (= 9.7-3), cpp (= 4:15.2.0-4), cpp-15 (= 15.2.0-4), cpp-15-aarch64-linux-gnu (= 15.2.0-4), cpp-aarch64-linux-gnu (= 4:15.2.0-4), dash (= 0.5.12-12), debconf (= 1.5.91), debhelper (= 13.28), debianutils (= 5.23.2), dh-autoreconf (= 21), dh-strip-nondeterminism (= 1.15.0-1), diffutils (= 1:3.10-4), dpkg (= 1.22.21), dpkg-dev (= 1.22.21), dwz (= 0.16-2), file (= 1:5.46-5), findutils (= 4.10.0-3), g++ (= 4:15.2.0-4), g++-15 (= 15.2.0-4), g++-15-aarch64-linux-gnu (= 15.2.0-4), g++-aarch64-linux-gnu (= 4:15.2.0-4), gcc (= 4:15.2.0-4), gcc-14-base (= 14.3.0-8), gcc-15 (= 15.2.0-4), gcc-15-aarch64-linux-gnu (= 15.2.0-4), gcc-15-base (= 15.2.0-4), gcc-aarch64-linux-gnu (= 4:15.2.0-4), gettext (= 0.23.1-2+b1), gettext-base (= 0.23.1-2+b1), grep (= 3.12-1), groff-base (= 1.23.0-9), gzip (= 1.13-1), hdf5-helpers (= 1.14.5+repack-4), hostname (= 3.25), init-system-helpers (= 1.69), intltool-debian (= 0.35.0+20060710.6), krb5-multidev (= 1.21.3-5), libacl1 (= 2.3.2-2+b1), libaec-dev (= 1.1.4-2), libaec0 (= 1.1.4-2), libarchive-zip-perl (= 1.68-1), libarchive13t64 (= 3.7.4-4+b1), libasan8 (= 15.2.0-4), libatomic1 (= 15.2.0-4), libattr1 (= 1:2.5.2-3), libaudit-common (= 1:4.1.2-1), libaudit1 (= 1:4.1.2-1), libbinutils (= 2.45-7), libblkid1 (= 2.41.2-4), libboost-dev (= 1.83.0.2+b2), libboost1.83-dev (= 1.83.0-5), libbrotli-dev (= 1.1.0-2+b7), libbrotli1 (= 1.1.0-2+b7), libbz2-1.0 (= 1.0.8-6), libc-bin (= 2.41-12), libc-dev-bin (= 2.41-12), libc6 (= 2.41-12), libc6-dev (= 2.41-12), libcap-ng0 (= 0.8.5-4+b1), libcap2 (= 1:2.75-10+b1), libcc1-0 (= 15.2.0-4), libcom-err2 (= 1.47.2-3+b3), libcppunit-1.15-0 (= 1.15.1-4+b2), libcppunit-dev (= 1.15.1-4+b2), libcrypt-dev (= 1:4.4.38-1), libcrypt1 (= 1:4.4.38-1), libctf-nobfd0 (= 2.45-7), libctf0 (= 2.45-7), libcurl4-openssl-dev (= 8.16.0-4), libcurl4t64 (= 8.16.0-4), libdb5.3t64 (= 5.3.28+dfsg2-10), libdebconfclient0 (= 0.280), libdebhelper-perl (= 13.28), libdpkg-perl (= 1.22.21), libelf1t64 (= 0.193-3), libevent-2.1-7t64 (= 2.1.12-stable-10+b1), libexpat1 (= 2.7.3-1), libffi8 (= 3.5.2-2), libfile-stripnondeterminism-perl (= 1.15.0-1), libgcc-14-dev (= 14.3.0-8), libgcc-15-dev (= 15.2.0-4), libgcc-s1 (= 15.2.0-4), libgdbm-compat4t64 (= 1.26-1), libgdbm6t64 (= 1.26-1), libgfortran5 (= 15.2.0-4), libgmp-dev (= 2:6.3.0+dfsg-5), libgmp10 (= 2:6.3.0+dfsg-5), libgmpxx4ldbl (= 2:6.3.0+dfsg-5), libgnutls-dane0t64 (= 3.8.10-2), libgnutls-openssl27t64 (= 3.8.10-2), libgnutls28-dev (= 3.8.10-2), libgnutls30t64 (= 3.8.10-2), libgomp1 (= 15.2.0-4), libgprofng0 (= 2.45-7), libgssapi-krb5-2 (= 1.21.3-5), libgssrpc4t64 (= 1.21.3-5), libhdf5-310 (= 1.14.5+repack-4), libhdf5-cpp-310 (= 1.14.5+repack-4), libhdf5-dev (= 1.14.5+repack-4), libhdf5-fortran-310 (= 1.14.5+repack-4), libhdf5-hl-310 (= 1.14.5+repack-4), libhdf5-hl-cpp-310 (= 1.14.5+repack-4), libhdf5-hl-fortran-310 (= 1.14.5+repack-4), libhogweed6t64 (= 3.10.2-1), libhwasan0 (= 15.2.0-4), libidn2-0 (= 2.3.8-4), libidn2-dev (= 2.3.8-4), libisl23 (= 0.27-1), libitm1 (= 15.2.0-4), libjansson4 (= 2.14-2+b3), libjpeg-dev (= 1:2.1.5-4), libjpeg62-turbo (= 1:2.1.5-4), libjpeg62-turbo-dev (= 1:2.1.5-4), libjsoncpp26 (= 1.9.6-4), libk5crypto3 (= 1.21.3-5), libkadm5clnt-mit12 (= 1.21.3-5), libkadm5srv-mit12 (= 1.21.3-5), libkdb5-10t64 (= 1.21.3-5), libkeyutils1 (= 1.6.3-6), libkrb5-3 (= 1.21.3-5), libkrb5-dev (= 1.21.3-5), libkrb5support0 (= 1.21.3-5), libldap-dev (= 2.6.10+dfsg-1), libldap2 (= 2.6.10+dfsg-1), liblsan0 (= 15.2.0-4), liblz4-1 (= 1.10.0-4), liblzma5 (= 5.8.1-2), libmagic-mgc (= 1:5.46-5), libmagic1t64 (= 1:5.46-5), libmd0 (= 1.1.0-2+b1), libmount1 (= 2.41.2-4), libmpc3 (= 1.3.1-2), libmpfr6 (= 4.2.2-2), libncursesw6 (= 6.5+20250216-2), libnettle8t64 (= 3.10.2-1), libnghttp2-14 (= 1.64.0-1.1+b1), libnghttp2-dev (= 1.64.0-1.1+b1), libnghttp3-9 (= 1.12.0-1), libnghttp3-dev (= 1.12.0-1), libngtcp2-16 (= 1.16.0-1), libngtcp2-crypto-ossl-dev (= 1.16.0-1), libngtcp2-crypto-ossl0 (= 1.16.0-1), libngtcp2-dev (= 1.16.0-1), libp11-kit-dev (= 0.25.9-2), libp11-kit0 (= 0.25.9-2), libpam-modules (= 1.7.0-5), libpam-modules-bin (= 1.7.0-5), libpam-runtime (= 1.7.0-5), libpam0g (= 1.7.0-5), libpcre2-8-0 (= 10.46-1), libperl5.40 (= 5.40.1-6), libpipeline1 (= 1.5.8-1), libpkgconf3 (= 1.8.1-4), libproc2-0 (= 2:4.0.4-9), libpsl-dev (= 0.21.2-1.1+b1), libpsl5t64 (= 0.21.2-1.1+b1), libreadline8t64 (= 8.3-3), librhash1 (= 1.4.6-1), librtmp-dev (= 2.4+20151223.gitfa8646d.1-3), librtmp1 (= 2.4+20151223.gitfa8646d.1-3), libsasl2-2 (= 2.1.28+dfsg1-10), libsasl2-modules-db (= 2.1.28+dfsg1-10), libseccomp2 (= 2.6.0-2), libselinux1 (= 3.8.1-1), libsframe2 (= 2.45-7), libsmartcols1 (= 2.41.2-4), libssh2-1-dev (= 1.11.1-1), libssh2-1t64 (= 1.11.1-1), libssl-dev (= 3.5.4-1), libssl3t64 (= 3.5.4-1), libstdc++-14-dev (= 14.3.0-8), libstdc++-15-dev (= 15.2.0-4), libstdc++6 (= 15.2.0-4), libsystemd0 (= 258.1-1), libsz2 (= 1.1.4-2), libtasn1-6 (= 4.20.0-2), libtasn1-6-dev (= 4.20.0-2), libtinfo6 (= 6.5+20250216-2), libtool (= 2.5.4-5), libtsan2 (= 15.2.0-4), libubsan1 (= 15.2.0-4), libuchardet0 (= 0.0.8-2), libudev1 (= 258.1-1), libunbound8 (= 1.24.0-2), libunistring5 (= 1.3-2), libuuid1 (= 2.41.2-4), libuv1t64 (= 1.51.0-2), libxml2-16 (= 2.14.6+dfsg-0.1), libxxhash0 (= 0.8.3-2), libzstd-dev (= 1.5.7+dfsg-2), libzstd1 (= 1.5.7+dfsg-2), linux-libc-dev (= 6.16.12-1), m4 (= 1.4.20-2), make (= 4.4.1-2), man-db (= 2.13.1-1), mawk (= 1.3.4.20250131-1), ncurses-base (= 6.5+20250216-2), ncurses-bin (= 6.5+20250216-2), nettle-dev (= 3.10.2-1), openssl-provider-legacy (= 3.5.4-1), patch (= 2.8-2), perl (= 5.40.1-6), perl-base (= 5.40.1-6), perl-modules-5.40 (= 5.40.1-6), pkgconf (= 1.8.1-4), pkgconf-bin (= 1.8.1-4), po-debconf (= 1.0.21+nmu1), procps (= 2:4.0.4-9), readline-common (= 8.3-3), rpcsvc-proto (= 1.4.3-1+b1), sed (= 4.9-2+b1), sensible-utils (= 0.0.26), sysvinit-utils (= 3.14-4), tar (= 1.35+dfsg-3.1), util-linux (= 2.41.2-4), xz-utils (= 5.8.1-2), zlib1g (= 1:1.3.dfsg+really1.3.1-1+b1), zlib1g-dev (= 1:1.3.dfsg+really1.3.1-1+b1) Environment: DEB_BUILD_OPTIONS="parallel=8" LANG="C.UTF-8" LC_COLLATE="C.UTF-8" LC_CTYPE="C.UTF-8" SOURCE_DATE_EPOCH="1760820315" +------------------------------------------------------------------------------+ | Package contents Sat, 29 Nov 2025 11:26:08 +0000 | +------------------------------------------------------------------------------+ mapsembler2-dbgsym_2.2.4+dfsg1-5_arm64.deb ------------------------------------------ new Debian package, version 2.0. size 2483568 bytes: control archive=752 bytes. 522 bytes, 12 lines control 513 bytes, 5 lines md5sums Package: mapsembler2-dbgsym Source: mapsembler2 Version: 2.2.4+dfsg1-5 Auto-Built-Package: debug-symbols Architecture: arm64 Maintainer: Debian Med Packaging Team Installed-Size: 3315 Depends: mapsembler2 (= 2.2.4+dfsg1-5) Section: debug Priority: optional Description: debug symbols for mapsembler2 Build-Ids: 0776b3c20672096fd7cef6463818583a9e8e6e51 102fff35c8abd26806fb144414462954526746f3 5dc3562fb58597b76999f20c67bfbb4c1a52f09d f5d1bfabf1913e3e6b4201211b2115fc01d4c6dd drwxr-xr-x root/root 0 2025-10-18 20:45 ./ drwxr-xr-x root/root 0 2025-10-18 20:45 ./usr/ drwxr-xr-x root/root 0 2025-10-18 20:45 ./usr/lib/ drwxr-xr-x root/root 0 2025-10-18 20:45 ./usr/lib/debug/ drwxr-xr-x root/root 0 2025-10-18 20:45 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2025-10-18 20:45 ./usr/lib/debug/.build-id/07/ -rw-r--r-- root/root 519856 2025-10-18 20:45 ./usr/lib/debug/.build-id/07/76b3c20672096fd7cef6463818583a9e8e6e51.debug drwxr-xr-x root/root 0 2025-10-18 20:45 ./usr/lib/debug/.build-id/10/ -rw-r--r-- root/root 176768 2025-10-18 20:45 ./usr/lib/debug/.build-id/10/2fff35c8abd26806fb144414462954526746f3.debug drwxr-xr-x root/root 0 2025-10-18 20:45 ./usr/lib/debug/.build-id/5d/ -rw-r--r-- root/root 1725456 2025-10-18 20:45 ./usr/lib/debug/.build-id/5d/c3562fb58597b76999f20c67bfbb4c1a52f09d.debug drwxr-xr-x root/root 0 2025-10-18 20:45 ./usr/lib/debug/.build-id/f5/ -rw-r--r-- root/root 915632 2025-10-18 20:45 ./usr/lib/debug/.build-id/f5/d1bfabf1913e3e6b4201211b2115fc01d4c6dd.debug drwxr-xr-x root/root 0 2025-10-18 20:45 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2025-10-18 20:45 ./usr/lib/debug/.dwz/aarch64-linux-gnu/ -rw-r--r-- root/root 38288 2025-10-18 20:45 ./usr/lib/debug/.dwz/aarch64-linux-gnu/mapsembler2.debug drwxr-xr-x root/root 0 2025-10-18 20:45 ./usr/share/ drwxr-xr-x root/root 0 2025-10-18 20:45 ./usr/share/doc/ lrwxrwxrwx root/root 0 2025-10-18 20:45 ./usr/share/doc/mapsembler2-dbgsym -> mapsembler2 mapsembler2_2.2.4+dfsg1-5_arm64.deb ----------------------------------- new Debian package, version 2.0. size 711776 bytes: control archive=1836 bytes. 1397 bytes, 27 lines control 2274 bytes, 28 lines md5sums Package: mapsembler2 Version: 2.2.4+dfsg1-5 Architecture: arm64 Maintainer: Debian Med Packaging Team Installed-Size: 1442 Depends: libc6 (>= 2.38), libgcc-s1 (>= 3.0), libgomp1 (>= 4.9), libstdc++6 (>= 13.1), zlib1g (>= 1:1.2.3.4), bc Section: science Priority: optional Homepage: http://colibread.inria.fr/mapsembler2/ Description: bioinformatics targeted assembly software Mapsembler2 is a targeted assembly software. It takes as input a set of NGS raw reads (fasta or fastq, gzipped or not) and a set of input sequences (starters). . It first determines if each starter is read-coherent, e.g. whether reads confirm the presence of each starter in the original sequence. Then for each read-coherent starter, Mapsembler2 outputs its sequence neighborhood as a linear sequence or as a graph, depending on the user choice. . Mapsembler2 may be used for (not limited to): - Validate an assembled sequence (input as starter), e.g. from a de Bruijn graph assembly where read-coherence was not enforced. - Checks if a gene (input as starter) has an homolog in a set of reads - Checks if a known enzyme is present in a metagenomic NGS read set. - Enrich unmappable reads by extending them, possibly making them mappable - Checks what happens at the extremities of a contig - Remove contaminants or symbiont reads from a read set drwxr-xr-x root/root 0 2025-10-18 20:45 ./ drwxr-xr-x root/root 0 2025-10-18 20:45 ./usr/ drwxr-xr-x root/root 0 2025-10-18 20:45 ./usr/bin/ lrwxrwxrwx root/root 0 2025-10-18 20:45 ./usr/bin/mapsembler2_extend -> mapsembler_extend -rwxr-xr-x root/root 395648 2025-10-18 20:45 ./usr/bin/mapsembler2_extremities -rwxr-xr-x root/root 133288 2025-10-18 20:45 ./usr/bin/mapsembler2_kissreads -rwxr-xr-x root/root 198928 2025-10-18 20:45 ./usr/bin/mapsembler2_kissreads_graph -rwxr-xr-x root/root 199128 2025-10-18 20:45 ./usr/bin/mapsembler_extend -rwxr-xr-x root/root 9585 2025-10-18 20:45 ./usr/bin/run_mapsembler2_pipeline drwxr-xr-x root/root 0 2025-10-18 20:45 ./usr/share/ drwxr-xr-x root/root 0 2025-10-18 20:45 ./usr/share/doc/ drwxr-xr-x root/root 0 2025-10-18 20:45 ./usr/share/doc/mapsembler2/ -rw-r--r-- root/root 52 2014-09-11 15:09 ./usr/share/doc/mapsembler2/EXAMPLE.md -rw-r--r-- root/root 218 2025-10-18 20:45 ./usr/share/doc/mapsembler2/README.Debian -rw-r--r-- root/root 5260 2014-09-11 15:09 ./usr/share/doc/mapsembler2/README.md.gz -rw-r--r-- root/root 268 2025-10-18 20:45 ./usr/share/doc/mapsembler2/README.source -rw-r--r-- root/root 278 2025-10-18 20:45 ./usr/share/doc/mapsembler2/README.test -rw-r--r-- root/root 174 2025-10-18 20:45 ./usr/share/doc/mapsembler2/README.test_data -rw-r--r-- root/root 1301 2025-10-18 20:45 ./usr/share/doc/mapsembler2/changelog.Debian.gz -rw-r--r-- root/root 4017 2025-10-18 20:45 ./usr/share/doc/mapsembler2/copyright drwxr-xr-x root/root 0 2025-10-18 20:45 ./usr/share/doc/mapsembler2/examples/ -rw-r--r-- root/root 174 2025-10-18 20:45 ./usr/share/doc/mapsembler2/examples/README.test_data -rw-r--r-- root/root 229216 2025-10-18 20:45 ./usr/share/doc/mapsembler2/examples/reads1.fa.gz -rw-r--r-- root/root 229914 2025-10-18 20:45 ./usr/share/doc/mapsembler2/examples/reads2.fa.gz -rw-r--r-- root/root 3853 2025-10-18 20:45 ./usr/share/doc/mapsembler2/examples/ref-mapsembler2_extremities.out.fa -rw-r--r-- root/root 3537 2025-10-18 20:45 ./usr/share/doc/mapsembler2/examples/ref-reads1_coherent_k_31_c_5_t_1.fasta -rw-r--r-- root/root 0 2025-10-18 20:45 ./usr/share/doc/mapsembler2/examples/ref-reads1_uncoherent_k_31_c_5_t_1.fasta -rw-r--r-- root/root 25386 2025-10-18 20:45 ./usr/share/doc/mapsembler2/examples/ref-res_k_31_c_5_t_3_modified_and_covered.json -rw-r--r-- root/root 78 2025-10-18 20:45 ./usr/share/doc/mapsembler2/examples/ref-res_mapsembler_k_31_c_2_t_1.fasta -rw-r--r-- root/root 83 2014-08-11 09:29 ./usr/share/doc/mapsembler2/examples/starter.fa -rw-r--r-- root/root 2382 2025-10-18 20:45 ./usr/share/doc/mapsembler2/run-unit-test drwxr-xr-x root/root 0 2025-10-18 20:45 ./usr/share/man/ drwxr-xr-x root/root 0 2025-10-18 20:45 ./usr/share/man/man1/ lrwxrwxrwx root/root 0 2025-10-18 20:45 ./usr/share/man/man1/mapsembler2_extend.1.gz -> mapsembler_extend.1.gz -rw-r--r-- root/root 742 2025-10-18 20:45 ./usr/share/man/man1/mapsembler2_extremities.1.gz -rw-r--r-- root/root 1316 2025-10-18 20:45 ./usr/share/man/man1/mapsembler2_kissreads.1.gz -rw-r--r-- root/root 878 2025-10-18 20:45 ./usr/share/man/man1/mapsembler2_kissreads_graph.1.gz -rw-r--r-- root/root 1033 2025-10-18 20:45 ./usr/share/man/man1/mapsembler_extend.1.gz -rw-r--r-- root/root 1022 2025-10-18 20:45 ./usr/share/man/man1/run_mapsembler2_pipeline.1.gz +------------------------------------------------------------------------------+ | Post Build Sat, 29 Nov 2025 11:26:10 +0000 | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup Sat, 29 Nov 2025 11:26:10 +0000 | +------------------------------------------------------------------------------+ Purging /build/reproducible-path Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary Sat, 29 Nov 2025 11:26:13 +0000 | +------------------------------------------------------------------------------+ Build Architecture: arm64 Build Type: any Build-Space: 255088 Build-Time: 162 Distribution: unstable Host Architecture: arm64 Install-Time: 7 Job: /srv/rebuilderd/tmp/rebuilderdFiyda4/inputs/mapsembler2_2.2.4+dfsg1-5.dsc Machine Architecture: arm64 Package: mapsembler2 Package-Time: 184 Source-Version: 2.2.4+dfsg1-5 Space: 255088 Status: successful Version: 2.2.4+dfsg1-5 -------------------------------------------------------------------------------- Finished at 2025-11-29T11:26:06Z Build needed 00:03:04, 255088k disk space build artifacts stored in /srv/rebuilderd/tmp/rebuilderdFiyda4/out checking mapsembler2-dbgsym_2.2.4+dfsg1-5_arm64.deb: size differs for mapsembler2-dbgsym_2.2.4+dfsg1-5_arm64.deb